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Loss and modification of habitat

Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate water balance (Thorson and Svihla 1943; Brattstrom 1963; Tracy 1976). Hence, individuals require and seek specific microhabitats that maintain their preferred body temperature while at the same time reducing water loss or allowing individuals to re-hydrate. Amphibians also possess relatively few physical attributes that protect them from predators. Although they may avoid predators behaviourally or deter them by skin toxins, amphibians lack defensive shells or hardened cuticles, do not have protective teeth or claws, and most are insufficiently fast to escape predators. Hence, they are relatively dependent on sites that conceal or protect them from predation. Most amphibians also differ significantly from other vertebrates in possessing a complex two-phase life cycle: the pre-metamorphic larval (tadpole) stage and the post-metamorphic juvenile and adult stage (Wilbur 1980, 1984). Most amphibian species have two distinct econes (Heatwole 1989), each with different habitat requirements, the larvae being aquatic and the post-metamorphic animals more terrestrial. The habitats required by the two phases can differ greatly, but both are essential to the survival of a species. However, amphibian diversity is great and exceptions to this general pattern exist. For example, some species have direct development without going through a larval stage and are fully terrestrial, whereas the larvae of other species can reach sexual maturity without going through metamorphosis (i.e., neoteny) and are fully aquatic.

Book chapter↗

Loss and modification of habitat

Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate water balance (Thorson and Svihla 1943; Brattstrom 1963; Tracy 1976). Hence, individuals require and seek specific microhabitats that maintain their preferred body temperature while at the same time reducing water loss or allowing individuals to re-hydrate. Amphibians also possess relatively few physical attributes that protect them from predators. Although they may avoid predators behaviourally or deter them by skin toxins, amphibians lack defensive shells or hardened cuticles, do not have protective teeth or claws, and most are insufficiently fast to escape predators. Hence, they are relatively dependent on sites that conceal or protect them from predation. Most amphibians also differ significantly from other vertebrates in possessing a complex two-phase life cycle: the pre-metamorphic larval (tadpole) stage and the post-metamorphic juvenile and adult stage (Wilbur 1980, 1984). Most amphibian species have two distinct econes (Heatwole 1989), each with different habitat requirements, the larvae being aquatic and the post-metamorphic animals more terrestrial. The habitats required by the two phases can differ greatly, but both are essential to the survival of a species. However, amphibian diversity is great and exceptions to this general pattern exist. For example, some species have direct development without going through a larval stage and are fully terrestrial, whereas the larvae of other species can reach sexual maturity without going through metamorphosis (i.e., neoteny) and are fully aquatic.

Book chapter↗

Winter severity affects occupancy of spring- and summer-breeding anurans across the eastern United States

Aim Climate change is an increasingly important driver of biodiversity loss. The ectothermic nature of amphibians may make them particularly sensitive to changes in temperature and precipitation regimes, adding to declines from other threats. While active season environmental conditions can influence growth and survival, effects of variation in winter conditions on population dynamics are less well-studied. Given that extreme winter temperatures can influence amphibian survival and fitness, we expected that increased winter severity—as measured by variability in winter temperatures and snow cover—would be associated with decreased occupancy, and that populations that experience more severe winters would have the largest sensitivities and show the greatest declines. Location Eastern United States. Time period 2001–2015. Major taxa studied Anurans. Methods We used large-scale citizen science data from the eastern half of the United States, a diverse biogeographic and climatic region, to assess how variation in winter severity influenced occupancy dynamics (i.e. presence or absence of species across sites and years) of 11 spring and summer breeding anuran species. Results Most species had increased occupancy in years with greater than average snow cover and warmer than average mean winter temperatures. Surprisingly, climatic conditions in winter affected occupancy dynamics of species with varying life history characteristics, including both spring and summer breeding species, those that overwinter under the soil, and those that overwinter in ponds and stream beds. For two wide-ranging species ( Lithobates catesbeianus and Lithobates clamitans ), colder winter temperatures reduced occupancy more at northern latitudes, while the association between days of snow cover and latitude was equivocal. Main conclusions As the climate continues to change, expected reductions in snowpack may reduce occupancy of already declining anuran populations, while milder winters may improve overwinter survival for some species. The contradictory impacts of temperature and snow cover illustrate the importance of considering multi-dimensional impacts of climate change on anuran populations.

Diversity and Distributions↗

A recombinant rabies vaccine that prevents viral shedding in rabid common vampire bats (Desmodus rotundus)

Vampire bat transmitted rabies (VBR) is a continuing burden to public health and agricultural sectors in Latin America, despite decades-long efforts to control the disease by culling bat populations. Culling has been shown to disperse bats, leading to an increased spread of rabies. Thus, non-lethal strategies to control VBR, such as vaccination, are desired. Here, we evaluated the safety and efficacy of a viral-vectored recombinant mosaic glycoprotein rabies vaccine candidate (RCN-MoG) in vampire bats ( Desmodus rotundus ) of unknown history of rabies exposure captured in México and transported to the United States. Vaccination with RCN-MoG was demonstrated to be safe, even in pregnant females, as no evidence of lesions or adverse effects were observed. We detected rabies neutralizing antibodies in 28% (8/29) of seronegative bats post-vaccination. Survival proportions of adult bats after rabies virus (RABV) challenge ranged from 55–100% and were not significantly different among treatments, pre- or post-vaccination serostatus, and route of vaccination, while eight pups (1–2.5 months of age) used as naïve controls all succumbed to challenge (P<0.0001). Importantly, we found that vaccination with RCN-MoG appeared to block viral shedding, even when infection proved lethal. Using real-time PCR, we did not detect RABV nucleic acid in the saliva samples of 9/10 vaccinated bats that succumbed to rabies after challenge (one was inconclusive). In contrast, RABV nucleic acid was detected in saliva samples from 71% of unvaccinated bats (10/14 sampled, plus one inconclusive) that died of the disease, including pups. Low seroconversion rates post-vaccination and high survival of non-vaccinated bats, perhaps due to earlier natural exposure, limited our conclusions regarding vaccine efficacy. However, our findings suggest a potential transmission-blocking effect of vaccination with RCN-MoG that could provide a promising strategy for controlling VBR in Latin America beyond longstanding culling programs.

San Luis Potosi↗

Earthquake recurrence and risk assessment in circum-Pacific seismic gaps

THE development of the concept of seismic gaps, regions of low earthquake activity where large events are expected, has been one of the notable achievements of seismology and plate tectonics. Its application to long-term earthquake hazard assessment continues to be an active field of seismological research. Here I have surveyed well documented case histories of repeated rupture of the same segment of circum-Pacific plate boundary and characterized their general features. I find that variability in fault slip and spatial extent of great earthquakes rupturing the same plate boundary segment is typical rather than exceptional but sequences of major events fill identified seismic gaps with remarkable order. Earthquakes are concentrated late in the seismic cycle and occur with increasing size and magnitude. Furthermore, earthquake rupture starts near zones of concentrated moment release, suggesting that high-slip regions control the timing of recurrent events. The absence of major earthquakes early in the seismic cycle indicates a more complex behaviour for lower-slip regions, which may explain the observed cycle-to-cycle diversity of gap-filling sequences.

Nature↗

Ophiolite and volcanic arc assemblages on the Vizcaino Peninsula and Cedros Island region, Baja California Sur, Mexico: Mesozoic forearc lithosphere of the Cordilleran magmatic arc

Mesozoic ophiolites in the Vizcaíno Peninsula and Cedros Island region of Baja California Sur are suprasubduction zone Cordilleran-type ophiolites structurally juxtaposed with underlying high pressure-temperature subduction complex assemblages. The region is divided into three separate tectonostratigraphic terranes, but here we recognize stratigraphic, intrusive, and petrologie links between these terranes and interpret the evolution of the entire region within the same Late Triassic to Early Cretaceous tectonic framework. Several phases of extension are recognized, including two major phases that resulted in development of distinct ophiolite assemblages. The Late Triassic Vizcaine Peninsula Ophiolite (221 ± 2 Ma) represents the earliest stage of this history and comprises a complete spreading center sequence with depleted upper mantle and mafie crustal rocks, including sheeted dike complex, Jurassic are magmatic rocks with low-Ti are tholelite and boninite geochemical affinities were intruded through and constructed on the Triassic ophiolite basement. Ultra-depleted are-ankaramites on Cedros Island may represent an initial phase of are rifting that was followed by major Middle Jurassic extension and production of the Cedros Island Ophiolite (173 ± 2 Ma). The Late Jurassic-Early Cretaceous Coloradito and Eugenia Formations contain mudflows and olistostrome blocks intercalated with are volcanogenic sediment and rift-related pillow lavas; these units record extension and/or transtension and provide the earliest definite evidence of are-continent interaction in the region. Middle Jurassic to Early Cretaceous are plutonic rocks (ca. 165-135 Ma) were shallowly intruded into low greenschist-facies ophiolite and are volcanic basement. Plutonic rocks range in composition from gabbro to granodiorite, but tonalite dominates. These intrusions are typical I-type Cordilleran batholithic rocks with relatively primitive are geochemical affinities (initial Sr 87 / 86 Sr range from ~0.704 to 0.706), but they are distinctly calcic in nature, a feature common to the adjacent Cretaceous Peninsular Ranges batholith. The Vizca í no-Cedros region correlates to ophiolitic terranes of the western Sierra Klamath belt and Coast Ranges of California and Oregon that were constructed in part across the North American margin. Age, stratigraphic, and petrochemical data from the Vizca í no-Cedros region support previously proposed forearc rifting models developed for the U.S. sector of the Cordilleran orogen that interpret the ophiolite assemblages as autochthonous or parautochthonous forearc lithosphere constructed outboard of the Mesozoic continental margin arc.

GSA Special Papers↗

Condition bias of decoy-harvested light geese during the conservation order

Evidence that decoy harvest techniques primarily remove individuals of poorer body condition is well established in short-lived duck species; however, there is limited support for condition bias in longer-lived waterfowl species, such as geese, where decoy harvest is considered primarily additive because of their high natural survival rates. We evaluated support for the harvest condition bias hypothesis of 2 long-lived waterfowl species, the lesser snow goose ( Anser caerulescens caerulescens ) and Ross's goose ( Anser rossii ). We used proximate analysis to quantify lipid and protein content of lesser snow and Ross's geese collected during the Light Goose Conservation Order (LGCO) in 2015 and 2016 during spring migration in Arkansas, Missouri, Nebraska, and South Dakota, USA. In each state, LGCO participants collected birds using traditional decoy techniques and we collected birds from the general population using jump-shooting tactics. Total body lipid content in both lesser snow and Ross's geese varied with age, region of harvest, and harvest type (decoy or jump-shooting). On average, adult lesser snow and Ross's geese harvested over decoys had 60 g and 41 g, respectively, fewer lipids than conspecifics collected using jump-shooting. We observed lower lipid reserves in decoy-shot geese in all 4 states sampled despite general gains in lipid reserves as migration chronology progressed. Our data support that the harvest condition bias extends to longer-lived waterfowl species and during a life-history event (spring migration) in which harvest is not normally observed. In the case of overabundant light geese, the disproportionate harvest of poorer-conditioned lesser snow and Ross's geese may serve as an additional challenge against any realized effects of harvest to reduce the population, in addition to extremely low harvest rates.

Arkansas, Missouri, Nebraska, South Dakota↗

Photoperiod control of downstream movements of Atlantic salmon Salmo salar smolts

This study provides the first direct observations that photoperiod controls the initiation of downstream movement in Atlantic salmon Salmo salar smolts. Under simulated natural day length (LDN) conditions and seasonal increases in temperature, smolts increased their downstream movements five-fold for a period of 1 month in late spring. Under the same conditions, parr did not show changes in downstream movement behaviour. When given a shortened day length (10L:14D) beginning in late winter, smolts did not increase the number of downstream movements. An early increase in day length (16L:8D) in late winter resulted in earlier initiation and termination of downstream movements compared to the LDN group. Physiological status and behaviour were related but not completely coincident: gill Na + /K + -ATPase activity increased in all treatments and thyroid hormone was elevated prior to movement in 16L:8D treatment. The most parsimonious model describing downstream movement of smolts included synergistic effects of photoperiod treatment and temperature, indicating that peak movements occurred at colder temperatures in the 16L:8D treatment than in LDN, and temperature did not influence movement of smolts in the 10L:14D treatment. The complicated interactions of photoperiod and temperature are not surprising since many organisms have evolved to rely on correlations among environmental cues and windows of opportunity to time behaviours associated with life-history transitions. These complicated interactions, however, have serious implications for phenological adjustments and persistence of S . salar populations in response to climate change.

Journal of Fish Biology↗

Historical land-use changes and potential effects on stream disturbance in the Ozark Plateaus, Missouri

Land-use changes have been blamed for creating disturbance in the morphology of streams in the Ozark Plateaus, Missouri (hereafter referred to as the Ozarks). Historical evidence and stratigraphic observations document that streams have been aggraded by substantial quantities of gravel beginning sometime at or near the time of European settlement of the Ozarks. Before European settlement, streams were depositing a mixed sediment load of gravel bedload and silty over-bank sediment. Observations of early explorers conspicuously lack descriptions of extensive gravel bars; observations of geologists working during the middle to late 1800's before significant land-use disturbance, however, include descriptions of large quantities of gravel in stream banks and beds. The first change in land cover as settlement progressed from the early 1800's to approximately 1880 was replacement of valley-bottom forest with cultivated fields and pastures. At the same time, suppression of wildfires in the uplands caused an increase of woodland with woody understory at the expense of grassland and oak savannah. Valley-bottom clearing probably initiated some direct disturbance of stream channels, but fire suppression would have decreased runoff and sediment yield from uplands. Beginning sometime during 1870 to 1880 and continuing until 1920, commercial timber companies began large operations in the Ozarks harvesting shortleaf pine for sawlogs and oak for railroad ties. Selective cutting of large timber, use of livestock for skidding logs from the forest, and avoidance of the steeper slopes minimized the effect of this phase of logging on runoff and sediment supply of uplands and valley-side slopes. Continued decreases in the erosional resistance of valley bottoms through clearing and road building, and the incidence of extreme regional floods from 1895 to 1915, probably caused initiation of moderate stream disturbance. This hypothesis is supported by historical and oral-historical observations that stream instability began before the peak of upland destabilization from 1920 to 1960. The post-Timber-boom period (1920 to 1960) included the institution of annual burning of uplands and cut-over valley-side slopes, increased grazing on open range, and increased use of marginal land for cultivated crops. Models for land-use controls on annual runoff, storm runoff, and soil erosion indicate this period should have been the most effective in creating stream disturbance. Written historical sources and oral-historical accounts indicate that erosion was notable mainly on lands in row-crop cultivation. Oral-history respondents consistently recall that smaller streams had more discharge for longer periods during 1920 to 1960 than during 1960 to 1993; many additionally observed that floods are "flashier" under present-day (1993) conditions. Changes in the timing of hydrographs probably relate to changes in upland and riparian zone vegetation that decreased storage and flow resistance. Probably the most destabilizing effect on Ozarks stream channels during this period was caused by livestock on the open range that concentrated in valley bottoms and destroyed riparian vegetation in the channels and on banks. Destruction of riparian vegetation in small valleys may have encouraged headward migration of channels, resulting in extension of the drainage network and accelerated release of gravel from storage in the small valleys. This hypothesis is supported by lack of other sources for the large quantity of gravel in Ozarks streams and oral-historical observations that gravel came out of the runs, rather than from slopes. From 1960 to 1993, cultivated fields and total improved land in farms decreased, but cattle populations continued to increase. This increase in grazing density has the potential to maintain runoff and sediment delivery to streams at rates higher than natural background rates. Whereas some riparian zones have been allowed to grow up into bottom-land forest, this stabilizing effect occurs on only a small part of valley-bottom land. Recovery processes aided by riparian vegetation are limited by channel instability and frequent, large floods.

Missouri↗

Historical land-use changes and potential effects on stream disturbance in the Ozark Plateaus, Missouri

Land-use changes have been blamed for creating disturbance in the morphology of streams in the Ozark Plateaus, Missouri (hereafter referred to as the "Ozarks"). Historical evidence and stratigraphic observations document that streams have been aggraded by substantial quantities of gravel beginning sometime at or near the time of European settlement of the Ozarks. Before European settlement, streams were depositing a mixed sediment load of gravel bedload and silty overbank sediment. Observations of early explorers conspicuously lack descriptions of extensive gravel bars; observations of geologists working during the middle to late 1800's before significant landuse disturbance, however, include descriptions of large quantities of gravel in stream banks and beds. The first change in land cover as settlement progressed from the early 1800's to approximately 1880 was replacement of valley-bottom forest with cultivated fields and pastures. At the same time, suppression of wildfires in the uplands caused an increase of woodland with woody understory at the expense of grassland and oak savannah. Valley-bottom clearing probably initiated some direct disturbance of stream channels, but fire suppression would have decreased runoff and sediment yield from uplands. Beginning sometime from 1870 to 1880 and continuing until 1920, commercial timber companies began large operations in the Ozarks to harvest shortleaf pine for sawlogs and oak for railroad ties. Selective cutting of large timber, use of livestock for skidding logs from the forest, and avoidance of the steeper slopes minimized the effect of this phase of logging on runoff and sediment supply of uplands and valley-side slopes. Continued decreases in the erosional resistance of valley bottoms through clearing and road building and the incidence of extreme regional floods from 1895 to 1915 probably caused initiation of moderate stream disturbance. This hypothesis is supported by historical and oral-historical observations that stream instability began before the peak of upland destabilization from 1920 to 1960. The post-Timber-boom period (1920-60) included the institution of annual burning of uplands and cut-over valley-side slopes, increased grazing on open range, and increased use of marginal land for cultivated crops. Models for landuse controls on annual runoff, storm runoff, and soil erosion indicate that this period should have been the most effective in creating stream disturbance. Written historical sources and oral-historical accounts indicate that erosion was notable mainly on lands in row-crop cultivation. Oral-history respondents consistently recall that smaller streams had more discharge for longer periods from 1920 to 1960 than from 1960 to 1993; many additionally observed that floods are "flashier" under present-day (1993) conditions. Changes in the timing of hydrographs probably relate to changes in upland and riparian zone vegetation that decreased storage and flow resistance. Probably the most destabilizing effect on Ozarks stream channels during this period was caused by livestock on the open range that concentrated in valley bottoms and destroyed riparian vegetation in the channels and on banks. Destruction of riparian vegetation in small valleys may have encouraged headward migration of channels, resulting in extension of the drainage network and accelerated release of gravel from storage in the small valleys. This hypothesis is supported by lack of other sources for the large quantity of gravel in Ozarks streams and oral-historical observations that gravel came out of the runs, rather than from slopes. From 1960 to 1993, cultivated fields and total improved land in farms decreased, but cattle populations continued to increase. This increase in grazing density has the potential to maintain runoff and sediment delivery to streams at rates higher than natural background rates. Whereas some riparian zones have been allowed to grow up into bottom-land forest, this stabilizing effect occurs on only a small part of valley-bottom land. Recovery processes aided by riparian vegetation are limited by channel instability and frequent, large floods.

Water Supply Paper↗

The aerosphere as a network connector of organisms and their diseases

Aeroecological processes, especially powered flight of animals, can rapidly connect biological communities across the globe. This can have profound consequences for evolutionary diversification, energy and nutrient transfers, and the spread of infectious diseases. The latter is of particular consequence for human populations, since migratory birds are known to host diseases which have a history of transmission into domestic poultry or even jumping to human hosts. In this chapter, we present a scenario under which a highly pathogenic avian influenza (HPAI) strain enters North America from East Asia via post-molting waterfowl migration. We use an agent-based model (ABM) to simulate the movement and disease transmission among 10 6 generalized waterfowl agents originating from ten molting locations in eastern Siberia, with the HPAI seeded in only ~10 2 agents at one of these locations. Our ABM tracked the disease dynamics across a very large grid of sites as well as individual agents, allowing us to examine the spatiotemporal patterns of change in virulence of the HPAI infection as well as waterfowl host susceptibility to the disease. We concurrently simulated a 12-station disease monitoring network in the northwest USA and Canada in order to assess the potential efficacy of these sites to detect and confirm the arrival of HPAI. Our findings indicated that HPAI spread was initially facilitated but eventually subdued by the migration of host agents. Yet, during the 90-day simulation, selective pressures appeared to have distilled the HPAI strain to its most virulent form (i.e., through natural selection), which was counterbalanced by the host susceptibility being conversely reduced (i.e., through genetic predisposition and acquired immunity). The monitoring network demonstrated wide variation in the utility of sites; some were clearly better at providing early warnings of HPAI arrival, while sites further from the disease origin exposed the selective dynamics which slowed the spread of the disease albeit with the result of passing highly virulent strains into southern wintering locales (where human impacts are more likely). Though the ABM presented had generalized waterfowl migration and HPAI disease dynamics, this exercise demonstrates the power of such simulations to examine the extremely large and complex processes which comprise aeroecology. We offer insights into how such models could be further parameterized to represent HPAI transmission risks as well as how ABMs could be applied to other aeroecological questions pertaining to individual-based connectivity.

Book chapter↗

Late Cenozoic geology and lacustrine history of Searles Valley, Inyo and San Bernardino Counties, California

Searles Valley is an arid, closed basin lying 70 km east of the south end of the Sierra Nevada, California. It is bounded on the east and northeast by the Slate Range, on the west by the Argus Range and Spangler Hills, and on the south by the Lava Mountains; Searles (dry) Lake occupies the north-central part of the valley. During those parts of late Pliocene and Pleistocene time when precipitation and runoff from the east side of the Sierra Nevada into the Owens River were much greater than at present, a chain of as many as five large lakes was created, of which Searles Lake was third. The stratigraphic record left in Searles Valley when that lake expanded, contracted, or desiccated, is fully revealed by cores from beneath the surface of Searles (dry) Lake and partly recorded by sediments cropping out around the edge of the valley. The subsurface record is described elsewhere. This volume includes six geologic maps (scales: 1:50,000 and 1:10,000) and a text that describes the outcrop record, most of which represents sedimentation since 150 ka. Although this outcrop record is discontinuous, it provides evidence indicating the lake's water depths during each expansion, which the subsurface record does not. Maximum-depth lakes rose to the 2,280-ft (695 m) contour, the level of the spillway that led overflowing waters to Panamint Valley; that spillway is about 660 ft (200 m) above the present dry-lake surface. Several rock units of Tertiary and early Quaternary ages crop out in Searles Valley. Siltstone and sandstone of Tertiary age, mostly lacustrine in nature and locally deformed to near-vertical dips, are exposed in the southern part of the valley, as is the younger(?) upper Miocene Bedrock Spring Formation. Unnamed, mostly mafic volcanic rocks of probable Miocene or Pliocene age are exposed along the north and south edges of the basin. Slightly deformed lacustrine sandstones are mapped in the central-southwestern and southern parts of the study area. The Christmas Canyon Formation and deposits mapped as older gravel and older tufa are extensively exposed over much of the basin floor. The older gravel unit and the gravel facies of the Christmas Canyon Formation are boulder alluvial gravels; parts of these units are probably correlative. The lacustrine facies of the Christmas Canyon Formation includes the Lava Creek ash, which is dated at 0.64 Ma; the older tufa deposits may be equivalent in age to those sediments. Most of this study concerns sediments of the newly described Searles Lake Formation, whose deposition spanned the period between about 150 ka and 2 ka. Most of this formation is lacustrine in origin, but it includes interbedded alluvium. To extract as much geologic detail as possible, criteria were developed that permitted (1) intrabasin correlation of some thin outcrop units representative of only a few thousand years (or less), (2) identification of unconformities produced by subaerial erosion, (3) identification of unconformities produced by sublacustrine erosion, and (4) correlation of outcrop units with subsurface units. The Searles Lake Formation is divided into seven main units, many of which are subdivided on the five larger scale geologic maps. Units A (oldest), B, C, and D are dominantly lacustrine in origin. The Pleistocene-Holocene boundary is placed at the top of unit C. In areas that were a kilometer or more from shore at the time of deposition, deposits of units A,B, and C consist of fine, highly calcareous sand, silt, or clay; nearer to shore they consist of well-sorted coarse sand and gravel. Unit A has been locally subdivided into as many as four subunits, unit B into six subunits, and unit C into six subunits. The finer facies of units A, B, and C contain such high percentages of Caco3 that they are best described as marl. Sediments of unit C, and to a lesser extent those of unit B, are laminated with light- to white-colored layers of aragonite, calcite, or dolomite(?) that may repre

California↗

Timing and duration of garnet granulite metamorphism in magmatic arc crust, Fiordland, New Zealand

Pembroke Granulite from Fiordland, New Zealand provides a window into the mid- to lower crust of magmatic arcs. Garnet Sm-Nd and zircon U-Pb ages constrain the timing and duration of high-P partial melting that produced trondhjemitic high Sr/Y magma. Trace element zoning in large, euhedral garnet is compatible with little post growth modification and supports the interpretation that garnet Sm-Nd ages of 126.1??2.0 and 122.6??2.0. Ma date crystal growth. Integration of the garnet ages with U-Pb zircon ages elucidates a history of intrusion(?) and a protracted period of high-temperature metamorphism and partial melting. The oldest zircon ages of 163 to 150. Ma reflect inheritance or intrusion and a cluster of zircon ages ca. 134. Ma date orthopyroxene-bearing mineral assemblages that may be magmatic or metamorphic in origin. Zircon and garnet ages from unmelted gneiss and garnet reaction zones record garnet granulite facies metamorphism at 128 to 126. Ma. Peritectic garnet and additional zircon ages from trondhjemite veins and garnet reaction zones indicate that garnet growth and partial melting lasted until ca. 123. Ma. Two single fraction garnet ages and young zircon ages suggest continued high-temperature re-equilibration until ca. 95. Ma. Phase diagram sections constrain orthopyroxene assemblages to <0.6 GPa @ 650??C, peak garnet granulite facies metamorphic conditions to 680-815??C @ 1.1-1.4. GPa, and a P-T path with a P increase of???0.5. GPa. These sections are compatible with water contents???0.28wt.%, local dehydration during garnet granulite metamorphism, and <0.3. GPa P increases during garnet growth. Results demonstrate the utility of integrated U-Pb zircon and Sm-Nd garnet ages, and phase diagram sections for understanding the nature, duration, and conditions of deep crustal metamorphism and melting. Geochronologic and thermobarometric data for garnet granulite indicate that thickening of arc crust, which caused high-pressure metamorphism in northern Fiordland, must have occurred prior to 126. Ma, that loading occurred at a rate of ca. 0.06. GPa/m.y., and that garnet granulite metamorphism lasted 3-7m.y. Locally-derived partial melts formed and crystallized in considerably less than 10 and perhaps as little as 3m.y. ?? 2010 Elsevier B.V.

Chemical Geology↗

Paleoclimate concepts

Interpretation of paleoclimate records requires an understanding of Earth’s climate system, the causes (forcings) of climate changes, and the processes that amplify (positive feedback) or damp (negative feedback) these changes. Paleoclimatologists reconstruct the history of climate from proxies, which are those characteristics of sedimentary deposits that preserve paleoclimate information. A great range of physical, chemical, isotopic, and biological characteristics of lake and ocean sediments, ice cores, cave formations, tree rings, the land surface itself, and more are used to reconstruct past climate. Ages of climate events are obtained by counting annual layers, measuring effects of the decay of radioactive atoms, assessing other changes that accumulate through time at rates that can be assessed accurately, and using time-markers to correlate sediments with others that have had their ages measured more accurately. Not all questions about the history of Earth’s climate can be answered through paleoclimatology: in some cases the necessary sediments are not preserved, or the climatic variable of interest is not recorded in the sediments. Nonetheless, many questions can be answered from the available information. An overview of the history of Arctic climate during the past 65 million years (m.y.) shows a long-term irregular cooling for tens of millions of years. As ice became established in the Arctic, it grew and shrank for tens of thousands of years in regular cycles. During at least the most recent of these cycles, shorter lived, large, and rapid fluctuations occurred, especially around the North Atlantic Ocean. The last 11,000 years or so have remained generally warm and relatively stable, but with small climate changes of varying spacing and size. Assessment of the causes of climate changes, and the records of those causes, shows that reduction in atmospheric carbon-dioxide concentration and changes in continental positions were important in the cooling trend throughout tens of millions of years. The cycling in ice extent was paced by features of Earth’s orbit and amplified by the effects of the ice itself, changes in carbon dioxide and other greenhouse gases, and additional feedbacks. Abrupt climate changes were linked to changes in the circulation of the ocean and the extent of sea ice. Changes in the Sun’s output and in Earth’s orbit, volcanic eruptions, and other factors have contributed to the natural climate changes since the end of the last ice age.

Book chapter↗

Soil geochemical signature of urbanization and industrialization – Chicago, Illinois, USA

The concentrations of 45 elements in ambient (not obviously disturbed) surface soils were determined for 57 sites distributed throughout the city of Chicago, Illinois in the upper Midwestern United States. These concentrations were compared to soils from 105 sites from a largely agricultural region within a 500-km radius surrounding the city and to soils collected from 90 sites across the state of Illinois. Although the bulk composition of the Chicago urban soils reflects largely natural sources, the soils are significantly enriched in many trace elements, apparently from anthropogenic sources. The median concentration of Pb in Chicago soils is 198 mg/kg, a 13-fold enrichment compared to regional concentrations. Zinc (median 235 mg/kg), Cu (59 mg/kg), and Ni (31 mg/kg) are also enriched from 2- to 4-fold in Chicago soils and all four elements show strong mutual correlations. These elevated concentrations are most likely related to vehicular and roadway sources and represent uneven distribution across the city as airborne material. Other airborne particulate material from a combination of fossil fuel combustion, waste incineration, and steel production may contribute to apparent elevated concentrations in Chicago soil of Fe (median 2.9%), Mo (5 mg/kg), V (82 mg/kg) and S (0.09%). Chicago soils are enriched from about 1.6- to 3-fold in these elements. Enrichments in P and Se may be caused by direct addition of phosphate fertilizer to parklands, lawns and gardens. The density of the sampling (1 site per 10 km 2 ) is inadequate to define the distribution of the observed enrichments within the city or to predict soil compositions for most of the areas between sample sites, but does provide a statistically significant signature of the history of urban and industrial activity within the city in contrast to the surrounding agricultural lands.

Illinois↗

Thermal modelling of stepwise anatexis in a thrust-thickened sialic crust

One-dimensional modelling of the thermal history of a sialic crust thickened by multiple overstack thrusting of upper crustal material shows that anatexis is likely. both the uplift rate and the length of the incubation period between end of tectonism and start of uplift are important controls on the amount and temperature of the melt. Heat of fusion does not significantly affect the long-term thermal structure of the crust if the melt is not extracted because only a small fraction of conductive heat is converted to latent heat, though short-term thermal effects of latent heat can be locally important. Model results show that commonly <15% of mantle heat flux is converted to latent heat; even during peak melting in the most productive models, less than half of incremental mantle flux is converted. The results have obvious implications on the acceptability of proposed heat sources for crustal anatexis. Fusion could retard crustal temperature rise by nearly 100??C, but the system would recover except for situations of very rapid uplift. Understanding of the thermal evolution of a burial-uplift system requires knowledge not only of the timing of anatexis but of the pooling and movement of the magma, as well as the duration and nature of the incubation period; we are poorly equipped to measure these events. The model predicts that the characteristic time for anatexis is a thickened sialic crust is several tens of millions of years, comparable to the time lapse between orogenies; in making geological interpretations of magmatism, this time lag must be considered. -Author

Transactions of the Royal Society of Edinburgh, Ea↗

Chapter 2: 2003 Geologic Assessment of Undiscovered Conventional Oil and Gas Resources in the Upper Cretaceous Navarro and Taylor Groups, Western Gulf Province, Texas

The Upper Cretaceous Navarro and Taylor Groups in the western part of the Western Gulf Province were assessed for undiscovered oil and gas resources in 2003. The area is part of the Smackover-Austin-Eagle Ford Composite Total Petroleum System. The rocks consist of, from youngest to oldest, the Escondido and Olmos Formations of the Navarro Group and the San Miguel Formation and the Anacacho Limestone of the Taylor Group (as well as the undivided Navarro Group and Taylor Group). Some units of the underlying Austin Group, including the 'Dale Limestone' (a term of local usage that describes a subsurface unit), were also part of the assessment in some areas. Within the total petroleum system, the primary source rocks comprise laminated carbonate mudstones and marine shales of the Upper Jurassic Smackover Formation, mixed carbonate and bioclastic deposits of the Upper Cretaceous Eagle Ford Group, and shelf carbonates of the Upper Cretaceous Austin Group. Possible secondary source rocks comprise the Upper Jurassic Bossier Shale and overlying shales within the Upper Jurassic to Lower Cretaceous Cotton Valley Group, Lower Cretaceous marine rocks, and the Upper Cretaceous Taylor Group. Oil and gas were generated in the total petroleum system at different times because of variations in depth of burial, geothermal gradient, lithology, and organic-matter composition. A burial-history reconstruction, based on data from one well in the eastern part of the study area (Jasper County, Tex.), indicated that (1) the Smackover generated oil from about 117 to 103 million years ago (Ma) and generated gas from about 52 to 41 Ma and (2) the Austin and Eagle Ford Groups generated oil from about 42 to 28 Ma and generated gas from about 14 Ma to the present. From the source rocks, oil and gas migrated upsection and updip along a pervasive system of faults and fractures as well as along bedding planes and within sandstone units. Types of traps include stratigraphic pinchouts, folds, faulted folds, and combinations of these. Seals consist of interbedded shales and mudstones and diagenetic cementation. The area assessed is divided into five assessment units (AUs): (1) Travis Volcanic Mounds Oil (AU 50470201), (2) Uvalde Volcanic Mounds Gas and Oil (AU 50470202), (3) Navarro-Taylor Updip Oil and Gas (AU 50470203), (4) Navarro-Taylor Downdip Gas and Oil (AU 50470204), and (5) Navarro-Taylor Slope-Basin Gas (AU 50470205). Total estimated mean undiscovered conventional resources in the five assessment units combined are 33.22 million barrels of oil, 1,682.80 billion cubic feet of natural gas, and 34.26 million barrels of natural gas liquids.

Data Series↗

2018 one‐year seismic hazard forecast for the central and eastern United States from induced and natural earthquakes

This article describes the U.S. Geological Survey (USGS) 2018 one‐year probabilistic seismic hazard forecast for the central and eastern United States from induced and natural earthquakes. For consistency, the updated 2018 forecast is developed using the same probabilistic seismicity‐based methodology as applied in the two previous forecasts. Rates of earthquakes across the United States M &#x2265; 3.0 "> M ≥ 3.0 grew rapidly between 2008 and 2015 but have steadily declined over the past 3 years, especially in areas of Oklahoma and southern Kansas where fluid injection has decreased. The seismicity pattern in 2017 was complex with earthquakes more spatially dispersed than in the previous years. Some areas of west‐central Oklahoma experienced increased activity rates where industrial activity increased. Earthquake rates in Oklahoma (429 earthquakes of M &#x2265; 3 "> M ≥ 3 and 4 M &#x2265; 4 "> M ≥ 4 ), Raton basin (Colorado/New Mexico border, six earthquakes M &#x2265; 3 "> M ≥ 3 ), and the New Madrid seismic zone (11 earthquakes M &#x2265; 3 "> M ≥ 3 ) continue to be higher than historical levels. Almost all of these earthquakes occurred within the highest hazard regions of the 2017 forecast. Even though rates declined over the past 3 years, the short‐term hazard for damaging ground shaking across much of Oklahoma remains at high levels due to continuing high rates of smaller earthquakes that are still hundreds of times higher than at any time in the state’s history. Fine details and variability between the 2016–2018 forecasts are obscured by significant uncertainties in the input model. These short‐term hazard levels are similar to active regions in California. During 2017, M &#x2265; 3 "> M ≥ 3 earthquakes also occurred in or near Ohio, West Virginia, Missouri, Kentucky, Tennessee, Arkansas, Illinois, Oklahoma, Kansas, Colorado, New Mexico, Utah, and Wyoming.

Seismological Research Letters↗