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USGS2021

Introduction to limnogeology: Progress, challenges, and opportunities: A tribute to Elizabeth Gierlowski-Kordesch

Elizabeth Gierlowski-Kordesch (1956–2016) was a leader and innovator in the specialty field of limnogeology since its beginnings in the late 1980s. Her excitement for field work and examining sediments was contagious, and she was always testing new research ideas. Beth would have been thrilled with the diversity of papers presented in the volume and the wide array of techniques used to determine the history, geochemistry, paleontology, and paleoclimate preserved in the sediments in basins that are located on every continent except Australia and Antarctica. She would also have been delighted that half the chapters were first authored by highly cited women scientists. Beth spent her career teaching, mentoring, conducting research with students and colleagues, and planning limnogeology conferences, books, and field trips. Her contributions span deep-time lakes from North and South America, Africa, Asia, and Europe, starting with her work on the Lower Jurassic East Berlin Formation where she conducted her Ph.D. research. Her work with Kerry Kelts at the University of Minnesota produced two books summarizing global lake research. These volumes are still used by many researchers, particularly as a starting point in their limnogeological studies. Her collaboration with Springer Nature® resulted in the series entitled Syntheses in Limnogeology , a publication that likely would not exist without her enthusiasm and perseverance. The papers in this second volume in the series describe a variety of Jurassic to modern lakes that range from fresh to hypersaline, shallow to deep, vary in size from <1 km 2 to 100s of km 2 , and are found in a number of tectonic settings. Various proxies, including microfossils and trace fossils and analyses of lacustrine sedimentology, stratigraphy, and stable isotopes are used to evaluate the sediment cores and stratigraphic sections to evaluate human and climate influences on the environment, the effects of tectonic, seismic, and volcanic activity, and variations in hydrology. The contributions in this volume reflect the diverse research that Beth conducted herself and we hope is a fitting honor to one of the founding scientists of Limnogeology.

Book chapter↗

USGS2019

Generalization in practice within national mapping agencies

National Mapping Agencies (NMAs) are still among the main end users of research into automated generalisation, which is transferred into their produc- tion lines via various means. This chapter includes contributions from seven NMAs, illustrating how automated generalisation is used in practice within their partly or fully automated databases and maps production lines, what results are currently being obtained and what further developments are on-going or planned. A contribution by the European Joint Research Center reports on the use of multiple representation and generalisation in the context of the implementation of the European INSPIRE directive. The chapter finishes with a synthesis of recent achievements, as well as future challenges that NMAs have begun to tackle.

Book chapter↗

USGS2016

Land uses, fire, and invasion: Exotic annual Bromus and human dimensions

Human land uses are the primary cause of the introduction and spread of exotic annual Bromus species. Initial introductions were likely linked to contaminated seeds used by homesteading farmers in the late 1880s and early 1900s. Transportation routes aided their spread. Unrestricted livestock grazing from the 1800s through the mid-1900s reduced native plant competitors leaving large areas vulnerable to Bromus dominance. Ecosystems with cooler and moister soils tend to have greater potential to recover from disturbances (resilience) and to be more resistant to Bromus invasion and dominance. Warmer and drier ecosystems are less resistant to Bromus and are threatened by altered fire regimes which can lead to Bromus dominance, impacts to wildlife, and alternative stable states. Native Americans used fire for manipulating plant communities and may have contributed to the early dominance of Bromus in portions of California. Fire as a tool is now limited to site preparation for revegetation in most ecosystems where Bromus is a significant problem. Once Bromus dominates, breaking annual grass/fire cycles requires restoring fire-tolerant perennial grasses and forbs, which can compete with Bromus and resist its dominance. Current weed management policies often lack regulations to prevent further expansion of Bromus . Research is needed on how and where livestock grazing might help increase perennial grass and forb cover and density to create ecosystems that are more resistant to Bromus . Also, studies are needed to ascertain the role, if any, of oil and gas development in contributing to the spread of Bromus .

Book chapter↗

USGS2016

Carbon budgets of biological soil crusts at micro-, meso-, and global scales

The importance of biocrusts in the ecology of arid lands across all continents is widely recognized. In spite of this broad distribution, contributions of biocrusts to the global biogeochemical cycles have only recently been considered. While these studies opened a new view on the global role of biocrusts, they also clearly revealed the lack of data for many habitats and of overall standards for measurements and analysis. In order to understand carbon cycling in biocrusts and the progress which has been made during the last 15 years, we offer a multi-scale approach covering different climatic regions. We also include a discussion on available measurement techniques at each scale: A micro-scale section focuses on the individual organism level, including modeling based on the combination of field and lab data. The meso-scale section addresses the CO2 exchange of a complete ecosystem or at the community level. Finally, we consider the contribution of biocrusts at a global scale, giving a general perspective of the most relevant findings regarding the role of biological soil crusts in the global terrestrial carbon cycle.

Book chapter↗

USGS2012

The effects of climate-change-induced drought and freshwater wetlands

Drought cycles in wetlands may become more frequent and severe in the future, with consequences for wetland distribution and function. According to the Intergovernmental Panel on Climate Change (Intergovernmental Panel on Climate Change [IPCC], Managing the risks of extreme events and disasters to advance climate change adaptation, 2012. Online: http://ipcc-wg2.gov/SREX/images/uploads/SREX-All_FINAL.pdf, climate-change is likely to affect precipitation and evapotranspiration patterns so that the world’s wetlands may have more frequent episodes of extreme flooding and drought. This chapter contributes to a worldwide view of how wetland processes may be affected by these predicted changes in climate. Specifically, the occurrence of drought may increase, and that increase may affect the critical processes that sustain biodiversity in wetlands. We include specific examples that explore the effects of drought and other climate-change factors on wetland function in various parts of the world. In a concluding section we discuss management strategies for climate-change in wetlands. The synthesis of information in this chapter will contribute to a better understanding of how climate-change-induced drought may affect the function and distribution of wetlands in the future.

Book chapter↗

USGS1989

Mechanisms of Cenozoic tectonic rotation, Pacific Northwest Convergent Margin, U.S.A.

Large clockwise rotations (15–80°) are characteristic of Cenozoic volcanic and sedimentary rocks along the convergent margin of the northwestern United States. Abundant paleomagnetic data from 62–12 m.y. old rocks in forearc, arc, and backarc regions show that rotation increases with age and with proximity to the coast. Paleomagnetic and structural studies both support dextral shear as a significant contributor to tectonic rotation in the Pacific Northwest, with an added contribution from Basin-Range extension. Paleomagnetism of individual Miocene (15-12 Ma) flows of the Columbia River Basalt Group show a well-defined, progressive increase in rotation across the forearc region toward the trench which is most readily explained by shear. This progressive increase in rotation toward the coast is also seen in Oligocene and Eocene rocks, although with steeper gradients, indicating that shear rotation has been important throughout Cenozoic time. The dextral shear may be accommodated by abundant, small-scale strike-slip faults which are acting as Riedel shears. Coast Range faults, usually with well-developed subhorizontal slickensides, occur throughout the stratigraphie section and are most abundant in the oldest rocks. Displacements are small to moderate (10 2 –10 3 m), and both dextral and sinistral faults are common. Fault trends are variable, with N20°–45°W faults showing dextral slip and N60°W-S70°W faults showing sinistral slip. The driving force for dextral shear presumably results from coupling of the overlying plate with the subducting Farallon plate, which has been moving northeast throughout most of Cenozoic time. The increase in rotation from north to south along the coast probably represents the contribution of extension in the Basin- Range region to the rotations in Oregon.

Book chapter↗

USGS2015

The influence of hydrology on lacustrine sediment contaminant records

The way water flows to a lake, through streams, as runoff, or as groundwater, can control the distribution and mass of sediment and contaminants deposited. Whether a lake is large or small, deep or shallow, open or closed, the movement of water to a lake and the circulation patterns of water within a lake control how and where sediment and contaminants are deposited. Particle-associated contaminants may stay close to the input source of contamination or be transported by currents to bathymetric lows. A complex morphology of the lake bottom or shoreline can also affect how contaminants will be distributed. Dissolved contaminants may be widely dispersed in smaller lakes, but may be diluted in large lakes away from the source. Although dissolved contaminants may not be deposited in lake sediments, the impact of dissolved contaminants (such as nitrogen) may be reflected by the ecosystem. For instance, increased phosphorus and nitrogen may increase organic content or algal biomass, and contribute to eutrophication of the lake over time. Changes in oxidation-reduction potential at the sediment-water interface may either release some contaminants to the water column or conversely deposit other contaminants to the sediment depending on the compound’s chemical characteristics. Changes in land use generally affect the hydrology of the watershed surrounding a lake, providing more runoff if soil binding vegetation is removed or if more impervious cover (roads and buildings) is increased. Groundwater inputs may change if pumping of the aquifer connected to the lake occurs. Even if groundwater is only a small portion of the volume of water entering a lake, if contaminant concentrations in the aquifer are high compared to surface water inputs, the mass of contaminants from groundwater may be as, or more, important than surface water contributions.

Book chapter↗

USGS1985

Time scales of change in the San Francisco Bay benthos

Results from multi-year investigations in the San Francisco Bay estuary show that large abundance fluctuations within benthic macroinvertebrate populations reflect both (1) within-year periodicity of reproduction, recruitment, and mortality that is not necessarily coincident with seasonal changes of the environment (e.g., the annual temperature cycle), and (2) aperiodic density changes (often larger than within-year fluctuations) following random perturbations of the environment. Density peaks of the small, short-lived estuarine invertebrates that comprise the vast majority of individuals in the bay's relatively homogeneous benthic community normally occur between spring and autumn depending on the species, in large part a reflection of reproductive periodicity. However, because mild winters permit reproductive activity in some of the common species throughout much of the year, other factors are important to within-year density fluctuations in the community. Seasonally predictable changes in freshwater inflow, wind and tidal mixing, microalgal biomass, and sediment erosion/deposition patterns all contribute to observed seasonal changes in abundance. For example, the commonly observed decline in abundance during winter reflects both short-lived species that die after reproducing and the stress of winter conditions (e.g., inundation by less saline, sediment-laden water and the decline in both planktonic and benthic algal biomass - a direct source of food for the shallow-water benthos). On the other hand, data from several studies suggest that observed 'recruitment' and 'mortality' may in fact be the migration of juveniles and adults to and from study sites. For example, the common amphipod Ampelisca abdita apparently moves from shallow to deep water, or from up-estuary to down-estuary locations, coincident with periods of high river runoff in winter. Growth of individuals within the few studied species populations is also highly seasonal, and appears to be coincident with seasonal increases in the abundance of planktonic and/or benthic microalgae. Two multi-year studies have shown that, in addition to within-year periodicity, major restructuring of the benthic community can occur as a result of anomalous (usually climate-related) perturbations of the benthic habitat. For example, during wet years freshwater-intolerant species disappear from the upper part of the estuary and from shallow areas of the bay. During a two-year drought these same species colonized the extreme upper end of the estuary in large numbers. Other aperiodic perturbations include localized instances of sediment erosion or deposition and algal mat accumulations that greatly depress abundance. Additionally, there is evidence (observations that the clam Macoma balthica establishes large populations only when the amphipod A. abdita is not abundant) that species interactions can contribute greatly to interannual variations. Thus, while community composition may change little over the long term, year-to-year predictability of species abundances is low. ?? 1985 Dr W. Junk Publishers.

Hydrobiologia↗

USGS1996

Episodic acidification of a coastal plain stream in Virginia

This study investigates the episodic acidification of Reedy Creek, a wetland-influenced coastal plain stream near Richmond, Virginia. Primary objectives of the study were to quantify the episodic variability of acid- base chemistry in Reedy Creek, to examine the seasonal variability in episodic response and to explain the hydrological and geochemical factors that contribute to episodic acidification. Chemical response was similar in each of the seven storms examined, however, the ranges in concentrations observed were commonly greater in summer/fall storms than in winter/spring storms. An increase in SO4/2- concentration with discharge was observed during all storms and peak concentration occurred at or near peak flow. Small increases in Mg2+, Ca2+, K+ concentrations and dissolved organic carbon (DOC) were observed during most storms. At the same time, ANC, Na+ and Cl- concentrations usually decreased with increasing discharge. In summer/fall storms, the absolute increase in SO4/2- concentration was one-third to 15 times the increase observed in winter/spring storms; the decrease in ANC during summer/fall storms was usually within the range of the decrease observed in winter/spring storms. In contrast, the decrease in Na+ and Cl- concentrations during winter/spring storms was much greater than that observed during summer/fall storms. Data show that while base flow anion deficit was higher in summer/fall than in winter/spring, anion deficit decreased during most summer/fall storms. In contrast, base flow anion deficit was lower in spring and winter, but increased during winter/spring storms. Increased SO4/2- concentration was the main cause of episodic acidification during storms at Reedy Creek, but increased anion deficit indicates organic acids may contribute to episodic acidification during winter/spring storms. Changes in SO4/2- concentration coincident with the hydrograph rise indicate quick routing of water through the watershed. Saturation overland flow appears to be the likely mechanism by which solutes are transported to the stream during storm flow.

Water, Air, & Soil Pollution↗

USGS1995

Environmental contaminants in eggs of California least terns (Sterna antillarum browni)

A severe decline in the coastal breeding population of California least terns (Sterna antillarum browni) in California and Baja California (U.S. Fish Wildl. Serv. 1980) prompted both State and Federal governments to designate it an endangered species in 1970 (Massey 1974). Significant losses of nesting and feeding habitat have contributed greatly to the decline of this subspecies (Massey 1974; Atwood and Minsky 1983). However, environmental contaminants, such as organochlorine compounds and metals, may also have contributed to the decline. California least terns are primarily piscivorous during the nesting period (Massey 1974), feeding predominantly on jack-smelt (Atherinops californiensis), topsmelt (A. affinis), and northern anchovy (Engraulis mordax) (Atwood and Minsky 1983). Topsmelt had the highest levels of DDE (p,p'-DDE) (up to 3 #g/g wet wt) of fish collected from San Diego Bay by Ohlendorf et al. (1985). Eggs of Caspian terns ~. caspia) from that study contained up to 56/~g/g DDE, and DDE was associated with a reduction in eggshell thickness as determined by the thickness index. In addition to shell deficiencies, organochlorines can also cause reduced egg production, aberrant incubation behavior, delayed ovulation, embryotoxicosis, and mortality of chicks and adults (Blus 1982). Mercury (Hg) and selenium (Se) have caused decreased hatchability, altered nesting behavior, and embryotoxicosis in birds in field and laboratory studies (Cormors et al. 1975; Ohlendorf et al. 1986; Heinz et al. 1987). Our objective was to evaluate the role of contaminants in the decline of California least terns.

California↗

USGS1993

Relationship of geological and geothermal field properties: Midcontinent area, USA, an example

Quantitative approaches to data analysis in the last decade have become important in basin modeling and mineral-resource estimation. The interrelation of geological, geophysical, geochemical, and geohydrological variables is important in adjusting a model to a real-world situation. Revealing the interdependences of variables can contribute in understanding the processes interacting in sedimentary basins. It is reasonably simple to compare spatial data of the same type but more difficult if different properties are involved. Statistical techniques, such as cluster analysis or principal components analysis, or some algebraic approaches can be used to ascertain the relations of standardized spatial data. In this example, structural configuration on five different stratigraphic horizons, one total sediment thickness map, and four maps of geothermal data were copared. As expected, the structural maps are highly related because all had undergone about the same deformation with differing degrees of intensity. The temperature gradients derived (1) from shallow borehole logging measurements under equilibrium conditions with the surrounding rock, and (2) from non-equilibrium bottom-hole temperatures (BHT) from deeper depths are mainly independent of each other. This was expected and confirmed also for the two temperature maps at 1000 ft which were constructed using both types of gradient values. Thus, it is evident that the use of a 2-point (BHT and surface temperature) straightline calculation of a mean temperature gradient gives different information about the geothermal regime than using gradients from temperatures logged under equilibrium conditions. Nevertheless, it is useful to determine to what a degree the larger dataset of nonequilibrium temperatures could reflect quantitative relationships to geologic conditions. Comparing all maps of geothermal information vs. the structural and the sediment thickness maps, it was determined that all correlations are moderately negative or slightly positive. These results are clearly shown by the cluster analysis and the principal components. Considering a close relationship between temperature and thermal conductivity of the sediments as observed for most of the Midcontinent area and relatively homogeneous heat-flow density conditions for the study area these results support the following assumptions: (1) undifferentiated geothermal gradients, computed from temperatures of different depth intervals and differing sediment properties, cannot contribute to an improved understanding of the temperature structure and its controls within the sedimentary cover, and (2) the quantitative approach of revealing such relations needs refined datasets of temperature information valid for the different depth levels or stratigraphic units. ?? 1993 International Association for Mathematical Geology.

Mathematical Geology↗

USGS2010

Combined effects of tectonic and landslide-generated Tsunami Runup at Seward, Alaska during the Mw 9.2 1964 earthquake

We apply a recently developed and validated numerical model of tsunami propagation and runup to study the inundation of Resurrection Bay and the town of Seward by the 1964 Alaska tsunami. Seward was hit by both tectonic and landslide-generated tsunami waves during the M W "> M W MW 9.2 1964 megathrust earthquake. The earthquake triggered a series of submarine mass failures around the fjord, which resulted in landsliding of part of the coastline into the water, along with the loss of the port facilities. These submarine mass failures generated local waves in the bay within 5 min of the beginning of strong ground motion. Recent studies estimate the total volume of underwater slide material that moved in Resurrection Bay to be about 211 million m 3 (Haeussler et al. in Submarine mass movements and their consequences, pp 269–278, 2007 ). The first tectonic tsunami wave arrived in Resurrection Bay about 30 min after the main shock and was about the same height as the local landslide-generated waves. Our previous numerical study, which focused only on the local landslide-generated waves in Resurrection Bay, demonstrated that they were produced by a number of different slope failures, and estimated relative contributions of different submarine slide complexes into tsunami amplitudes (Suleimani et al. in Pure Appl Geophys 166:131–152, 2009 ). This work extends the previous study by calculating tsunami inundation in Resurrection Bay caused by the combined impact of landslide-generated waves and the tectonic tsunami, and comparing the composite inundation area with observations. To simulate landslide tsunami runup in Seward, we use a viscous slide model of Jiang and LeBlond (J Phys Oceanogr 24(3):559–572, 1994 ) coupled with nonlinear shallow water equations. The input data set includes a high resolution multibeam bathymetry and LIDAR topography grid of Resurrection Bay, and an initial thickness of slide material based on pre- and post-earthquake bathymetry difference maps. For simulation of tectonic tsunami runup, we derive the 1964 coseismic deformations from detailed slip distribution in the rupture area, and use them as an initial condition for propagation of the tectonic tsunami. The numerical model employs nonlinear shallow water equations formulated for depth-averaged water fluxes, and calculates a temporal position of the shoreline using a free-surface moving boundary algorithm. We find that the calculated tsunami runup in Seward caused first by local submarine landslide-generated waves, and later by a tectonic tsunami, is in good agreement with observations of the inundation zone. The analysis of inundation caused by two different tsunami sources improves our understanding of their relative contributions, and supports tsunami risk mitigation in south-central Alaska. The record of the 1964 earthquake, tsunami, and submarine landslides, combined with the high-resolution topography and bathymetry of Resurrection Bay make it an ideal location for studying tectonic tsunamis in coastal regions susceptible to underwater landslides.

Alaska↗

USGS2003

Concentrations of metals in feathers and blood of nestling Black-Crowned Night-Herons (Nycticorax nycticorax) in Chesapeake and Delaware Bays

Over the past decade, destruction and degradation of wetland habitat has contributed to the decline of wading bird colonies on the Atlantic Coast. In 1998, an initial assessment of the possible contribution of metal pollution to declining heron populations in Chesapeake and Delaware Bays was conducted. Study sites included two heronries in industrialized locations (Pea Patch Island, DE and Baltimore Harbor, MD), and a reference site (Holland Island) remotely located in the southern Chesapeake Bay. Concentrations of 19 metals, metalloids, and trace elements were examined in blood and breast feathers of 14-16 day old nestling black-crowned night-herons. Metal concentrations in blood were low and showed few site differences, though mercury was elevated at Pea Patch Island as compared to other sites. In feathers, metal concentrations appeared to be in the low to moderate range at all sites, though limited data exist for interpreting pollutant concentrations in feathers of nestling wading birds. Where differences were detected, concentrations at Pea Patch Island were consistently greater than those at Baltimore Harbor and Holland Island. Feathers collected at Pea Patch Island had significantly greater concentrations of aluminum, barium, iron, lead, magnesium, and manganese, but were generally found to be within the range of concentrations detected in other nestling birds, where that information was available. Based on these results, metal pollution does not appear to be an immediate threat to BCNH colonies at these two locations, though future monitoring of some elements (Pb, Mn, and Al) may be warranted.

Bulletin of Environmental Contamination and Toxico↗

USGS2009

Toxicity of sediment cores collected from the Ashtabula River in northeastern Ohio, USA, to the amphipod Hyalella azteca

This study was conducted to support a Natural Resource Damage Assessment and Restoration project associated with the Ashtabula River in Ohio. The objective of the study was to evaluate the chemistry and toxicity of 50 sediment samples obtained from five cores collected from the Ashtabula River (10 samples/core, with each 10-cm-diameter core collected to a total depth of about 150 cm). Effects of chemicals of potential concern (COPCs) measured in the sediment samples were evaluated by measuring whole-sediment chemistry and whole-sediment toxicity in the sediment samples (including polycyclic aromatic hydrocarbons [PAHs], polychlorinated biphenyls [PCBs], organochlorine pesticides, and metals). Effects on the amphipod Hyalella azteca at the end of a 28-day sediment toxicity test were determined by comparing survival or length of amphipods in individual sediment samples in the cores to the range of responses of amphipods exposed to selected reference sediments that were also collected from the cores. Mean survival or length of amphipods was below the lower limit of the reference envelope in 56% of the sediment samples. Concentrations of total PCBs alone in some samples or concentrations of total PAHs alone in other samples were likely high enough to have caused the reduced survival or length of amphipods (i.e., concentrations of PAHs or PCBs exceeded mechanistically based and empirically based sediment quality guidelines). While elevated concentrations of ammonia in pore water may have contributed to the reduced length of amphipods, it is unlikely that the reduced length was caused solely by elevated ammonia (i.e., concentrations of ammonia were not significantly correlated with the concentrations of PCBs or PAHs and concentrations of ammonia were elevated both in the reference sediments and in the test sediments). Results of this study show that PAHs, PCBs, and ammonia are the primary COPCs that are likely causing or substantially contributing to the toxicity to sediment-dwelling organisms. ?? 2009 US Government.

Archives of Environmental Contamination and Toxico↗

USGS2004

The occurrence of lysogenic bacteria and microbial aggregates in the lakes of the McMurdo Dry Valleys, Antarctica

The McMurdo Dry Valleys of Antarctica form the coldest and driest ecosystem on Earth. Within this region there are a number of perennially ice-covered (3–6 m thick) lakes that support active microbial assemblages and have a paucity of metazoans. These lakes receive limited allochthonous input of carbon and nutrients, and primary productivity is limited to only 6 months per year owing to an absence of sunlight during the austral winters. In an effort to establish the role that bacteria and their associated viruses play in carbon and nutrient cycling in these lakes, indigenous bacteria, free bacteriophage, and lysogen abundances were determined. Total bacterial abundances (TDC) ranged from 3.80 × 10 4 to 2.58 × 10 7 cells mL −1 and virus-like particle (VLP) abundances ranged from 2.26 × 10 5 to 5.56 × 10 7 VLP mL −1 . VLP abundances were significantly correlated ( P < 0.05) with TDC, bacterial productivity (TdR), chlorophyll a (Chl a ), and soluble reactive phosphorus (SRP). Lysogenic bacteria, determined by induction with mitomycin C, made up between 2.0% and 62.5% of the total population of bacteria when using significant decreases and increases in TDC and VLP abundances, respectively, and 89.5% when using increases in VLP abundances as the sole criterion for a successful induction event. The contribution of viruses released from induced lysogens contributed <0.015% to the total viral production rate. Carbohydrate and protein based organic aggregates were abundant within the water column of the lakes and were heavily colonized by bacteria and VLPs. Alkaline phosphatase activity was detected within the matrix of the aggregates, implying phosphorus deficiency and consortial nutrient exchanges among microorganisms.

Microbial Ecology↗

USGS2020

What could explain δ13C signatures in biocrust cyanobacteria of drylands?

Dryland ecosystems are increasing in geographic extent and contribute greatly to interannual variability in global carbon dynamics. Disentangling interactions among dominant primary producers, including plants and autotrophic microbes, can help partition their contributions to dryland C dynamics. We measured the δ 13 C signatures of biological soil crust cyanobacteria and dominant plant species (C 3 and C 4 ) across a regional scale in the southwestern USA to determine if biocrust cyanobacteria were coupled to plant productivity (using plant-derived C mixotrophically), or independent of plant activity (and therefore purely autotrophic). Cyanobacterial assemblages located next to all C 3 plants and one C 4 species had consistently more negative δ 13 C (by 2‰) than the cyanobacteria collected from plant interspaces or adjacent to two C 4 Bouteloua grass species. The differences among cyanobacterial assemblages in δ 13 C could not be explained by cyanobacterial community composition, photosynthetic capacity, or any measured leaf or root characteristics (all slopes not different from zero). Thus, microsite differences in abiotic conditions near plants, rather than biotic interactions, remain a likely mechanism underlying the observed δ 13 C patterns to be tested experimentally.

New Mexico↗

USGS2001

Quantification of mine-drainage inflows to Little Cottonwood Creek, Utah, using a tracer-injection and synoptic-sampling study

Historic mining in Little Cottonwood Canyon in Utah has left behind many mine drainage tunnels that discharge water to Little Cottonwood Creek. To quantify the major sources of mine drainage to the stream, synoptic sampling was conducted during a tracer injection under low flow conditions (September 1998). There were distinct increases in discharge downstream from mine drainage and major tributary inflows that represented the total surface and subsurface contributions. The chemistry of stream water determined from synoptic sampling was controlled by the weathering of carbonate rocks and mine drainage inflows. Buffering by carbonate rocks maintained a high pH throughout the study reach. Most of the metal loading was from four surface-water inflows and three subsurface inflows. The main subsurface inflow was from a mine pool in the Wasatch Tunnel. Natural attenuation of all the metals resulted in the formation of colloidal solids, sorption of some metals, and accumulation onto the streambed. The deposition on the streambed could contribute to chronic toxicity for aquatic organisms. Information from the study will help to make decisions about environmental restoration.

Utah↗

USGS2012

Wildlife contact analysis: Emerging methods, questions, and challenges

Recent technological advances, such as proximity loggers, allow researchers to collect complete interaction histories, day and night, among sampled individuals over several months to years. Social network analyses are an obvious approach to analyzing interaction data because of their flexibility for fitting many different social structures as well as the ability to assess both direct contacts and indirect associations via intermediaries. For many network properties, however, it is not clear whether estimates based upon a sample of the network are reflective of the entire network. In wildlife applications, networks may be poorly sampled and boundary effects will be common. We present an alternative approach that utilizes a hierarchical modeling framework to assess the individual, dyadic, and environmental factors contributing to variation in the interaction rates and allows us to estimate the underlying process variation in each. In a disease control context, this approach will allow managers to focus efforts on those types of individuals and environments that contribute the most toward super-spreading events. We account for the sampling distribution of proximity loggers and the non-independence of contacts among groups by only using contact data within a group during days when the group membership of proximity loggers was known. This allows us to separate the two mechanisms responsible for a pair not contacting one another: they were not in the same group or they were in the same group but did not come within the specified contact distance. We illustrate our approach with an example dataset of female elk from northwestern Wyoming and conclude with a number of important future research directions.

Behavioral Ecology and Sociobiology↗