The U.S. Geological Survey Recent Highlights--Environmental Effects on Human and Wildlife Health
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BACKGROUND Island ecosystems throughout the Pacific have undergone catastrophic species loss, largely due to the effects of alien or non-native species. Rats, in particular, pose significant threats to native species. In Hawai`i, the appearance of rats (which are not native to Hawai`i) in the subfossil record coincides with the disappearance of ground nesting birds. Sadly, only three of Hawai`i?s 10 endemic waterfowl species still exist today. The Laysan Duck (Anas laysanensis), also known as the Laysan Teal, is a critically endangered dabbling duck that is restricted to a single population on the remote and rat-free Laysan Island (Fig. 1). The Laysan Duck was listed as an endangered species in 1966 because of its small population, limited distribution, and dependence on a fragile island ecosystem. The same threats identified in 1966 continue to plague the species today.
BACKGROUND Domestic cats (Felis catus) were first brought to Hawai`i aboard sailing ships of European explorers and colonists. The job of these predators was to control mice and rats on the ships during the long voyages. As in other places, cats were taken in and adopted by the families of Hawai`i and soon became household pets known as popoki. But cats have always been very well equipped to live and hunt on their own. On tropical archipelagos like the Hawaiian Islands where no other predatory mammals of comparable size existed, abundant and naive prey were particularly easy game, and cats soon thrived in the wild. Although the details of when cats first came to live in the wild remain little known, adventurers, writers, and naturalists of the day recorded some important observations. Feral cats were observed in remote wilderness around K?ilauea volcano on Hawai`i Island as early as 1840 by explorer William Brackenridge. Mark Twain was so impressed by the great abundance of cats when he visited Honolulu in 1866 that he reported his observations in the Sacramento Union newspaper, which were later reprinted in his book Roughing It: I saw... tame cats, wild cats, singed cats, individual cats, groups of cats, platoons of cats, companies of cats, regiments of cats, armies of cats, multitudes of cats, millions of cats...
Landscape patterns and processes reflect both natural ecosystem attributes and the policy and management decisions of individual Federal, State, county, and private organizations. Land-use regulation, water management, and habitat conservation and restoration efforts increasingly rely on landscape-level approaches that incorporate scientific information into the decision-making process. Since management actions are implemented to affect future conditions, decision-support models are necessary to forecast potential future conditions resulting from these decisions. Spatially explicit modeling approaches enable testing of different scenarios and help evaluate potential outcomes of management actions in conjunction with natural processes such as climate change. The ability to forecast the effects of changing land use and climate is critically important to land and resource managers since their work is inherently site specific, yet conservation strategies and practices are expressed at higher spatial and temporal scales that must be considered in the decisionmaking process.
Scientists at the U.S. Geological Survey (USGS) use a range of research approaches to investigate the genetics of native and non-native species that are being managed. This Fact Sheet outlines those approaches and explains the type of information they provide.
A deadly fungal pathogen, Batrachochytrium salamandrivorans ( Bsal ) that affects amphibian skin was discovered during a die-off of European fire salamanders ( Salamandra salamandra ) in 2014. This pathogen has the potential to worsen already severe worldwide amphibian declines. Bsal is a close relative to another fungal disease known as Batrachochytrium dendrobatidis ( Bd ). Many scientists consider Bd to be the greatest threat to amphibian biodiversity of any disease because it affects a large number of species and has the unusual ability to drive species and populations to extinction. Although not yet detected in the United States, the emergence of Bsal could threaten the salamander population, which is the most diverse in the world. The spread of Bsal likely will lead to more State and federally listed threatened or endangered amphibian species, and associated economic effects. Because of the concern expressed by resource management agencies, the U.S. Geological Survey (USGS) has made Bsal and similar pathogens a priority for research.
No abstract available.
This study was initiated to expand upon previous findings that indicated concentrations of dissolved solids, arsenic, boron, mercury, molybdenum, selenium, and uranium were either above geochemical background concentrations or were approaching or exceeding ecological criteria in the lower Humboldt River system. Data were collected from May 1998 to September 2000 to further characterize streamflow and surface-water and bottom-sediment quality in the lower Humboldt River, selected agricultural drains, Upper Humboldt Lake, and Lower Humboldt Drain (ephemeral outflow from Humboldt Sink). During this study, flow in the lower Humboldt River was either at or above average. Flows in Army and Toulon Drains generally were higher than reported in previous investigations. An unnamed agricultural drain contributed a small amount to the flow measured in Army Drain. In general, measured concentrations of sodium, chloride, dissolved solids, arsenic, boron, molybdenum, and uranium were higher in water from agricultural drains than in Humboldt River water during this study. Mercury concentrations in water samples collected during the study period typically were below the laboratory reporting level. However, low-level mercury analyses showed that samples collected in August 1999 from Army Drain had higher mercury concentrations than those collected from the river or Toulon Drain or the Lower Humboldt Drain. Ecological criteria and effect concentrations for sodium, chloride, dissolved solids, arsenic, boron, mercury, and molybdenum were exceeded in some water samples collected as part of this study. Although water samples from the agricultural drains typically contained higher concentrations of sodium, chloride, dissolved solids, arsenic, boron, and uranium, greater instantaneous loads of these constituents were carried in the river near Lovelock than in agricultural drains during periods of high flow or non-irrigation. During this study, the high flows in the lower Humboldt River produced the maximum instantaneous loads of sodium, chloride, dissolved solids, arsenic, boron, molybdenum, and uranium at all river-sampling sites, except molybdenum near Imlay. Nevada Division of Environmental Protection monitoring reports on mine-dewatering discharge for permitted releases of treated effluent to the surface waters of the Humboldt River and its tributaries were reviewed for reported discharges and trace-element concentrations from June 1998 to September 1999. These data were compared with similar information for the river near Imlay. In all bottom sediments collected for this study, arsenic concentrations exceeded the Canadian Freshwater Interim Sediment-Quality Guideline for the protection of aquatic life and probable-effect level (concentration). Sediments collected near Imlay, Rye Patch Reservoir, Lovelock, and from Toulon Drain and Army Drain were found to contain cadmium and chromium concentrations that exceeded Canadian criteria. Chromium concentrations in sediments collected from these sites also exceeded the consensus-based threshold-effect concentration. The Canadian criterion for sediment copper concentration was exceeded in sediments collected from the Humboldt River near Lovelock and from Toulon, Army, and the unnamed agricultural drains. Mercury in sediments collected near Imlay and from Toulon Drain in August 1999 exceeded the U.S. Department of the Interior sediment probable-effect level. Nickel concentrations in sediments collected during this study were above the consensus-based threshold-effect concentration. All other river and drain sediments had constituent concentrations below protective criteria and toxicity thresholds. In Upper Humboldt Lake, chloride, dissolved solids, arsenic, boron, molybdenum, and uranium concentrations in surface-water samples collected near the mouth of the Humboldt River generally were higher than in samples collected near the mouth of Army Drain. Ecological criteria or effect con
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In the summer of 2007, we undertook an assessment of larval and juvenile sucker use of Hanks Marsh in Upper Klamath Lake, Oregon. This 1,200-acre marsh on the southeastern shoreline of the lake represents part of the last remaining natural emergent wetland habitat in the lake. Because of the suspected importance of this type of habitat to larval and juvenile endangered Lost River and shortnose suckers, it was thought that sucker abundance in the marsh might be comparatively greater than in other non-vegetated areas of the lake. It also was hoped that Hanks Marsh would serve as a reference site for wetland restoration projects occurring in other areas of the lake. Our study had four objectives: to (1) examine seasonal distribution and relative abundance of larval suckers in and adjacent to Hanks Marsh in relation to habitat features such as depth, vegetation, water quality, and relative abundance of non-sucker species; (2) determine the presence or absence and describe the distribution of juvenile suckers [35 to 80 mm standard length (SL)] along the periphery of Hanks Marsh; (3) assess spatial and temporal overlap between larval suckers and their potential predators; and (4) assess suitability of water quality throughout the summer for young-of-the-year suckers. Due to the low number of suckers found in the marsh and our inability to thoroughly sample all marsh habitats due to declining lake levels during the summer, we were unable to completely address these objectives in this pilot study. The results, however, do give some indication of the relative use of Hanks Marsh by sucker and non-sucker species. Through sampling of larval and juvenile suckers in various habitat types within the marsh, we determined that sucker use of Hanks Marsh may be very low in comparison with other areas of the lake. We caught only 42 larval and 19 juvenile suckers during 12 weeks of sampling throughout the marsh. Sucker catches were rare in Hanks Marsh, and were lower than catch rates in other marshes of Upper Klamath Lake and in other nearshore and offshore areas of the lake. Based on the few suckers we did capture in Hanks Marsh, larvae tended to be found more often in vegetated habitats. A modified sampling design and approach may be necessary to address the objectives in this study, given that declining lake-surface elevation prevented us from adequately sampling all portions of the marsh throughout the sampling season. Common non-sucker species in Hanks Marsh included juvenile and adult brown bullhead, larval blue chub, tui chub, fathead minnow, and yellow perch. This species composition was similar to that of other marshes in Upper Klamath Lake but most species were found in lower numbers in Hanks Marsh than other marshes. It may be that use of Hanks Marsh is limited by poor water quality, which we found to exist at many sites after June. It also may be that access to or habitat in the marsh is limited at certain times of the year by low water. Although the results from this initial study of Hanks Marsh indicate that the area may have little direct benefit for sucker species, indirect benefits for these species possibly may come from its positive influence on some aspects of water quality in the lake, such as regulation of pH. It also may be the case that use of Hanks Marsh may vary by year and conditions; however, under the current scope of the study, we were unable to investigate inter-annual variability.
Permafrost has warmed throughout much of the Northern Hemisphere since the 1980s, with colder permafrost sites warming more rapidly (Romanovsky and others, 2010; Smith and others, 2010). Warming of the near-surface permafrost may lead to widespread terrain instability in ice-rich permafrost in the Arctic and the Subarctic, and may result in thermokarst development and other thaw-related landscape features (Jorgenson and others, 2006; Gooseff and others, 2009). Thermokarst and other thaw-related landscape features result from varying modes and scales of permafrost thaw, subsidence, and removal of material. An increase in active-layer depth, water accumulation on the soil surface, permafrost degradation and associated retreat of the permafrost table, and changes to lake shores and coastal bluffs act and interact to create thermokarst and other thaw-related landscape features (Shur and Osterkamp, 2007). There is increasing interest in the spatial and temporal dynamics of thermokarst and other thaw-related features from diverse disciplines including landscape ecology, hydrology, engineering, and biogeochemistry. Therefore, there is a need to synthesize and disseminate knowledge on the current state of near-surface permafrost terrain. The term "thermokarst" originated in the Russian literature, and its scientific use has varied substantially over time (Shur and Osterkamp, 2007). The modern definition of thermokarst refers to the process by which characteristic landforms result from the thawing of ice-rich permafrost or the melting of massive ice (van Everdingen, 1998), or, more specifically, the thawing of ice-rich permafrost and (or) melting of massive ice that result in consolidation and deformation of the soil surface and formation of specific forms of relief (Shur, 1988). Jorgenson (2013) identifies 23 distinct thermokarst and other thaw-related features in the Arctic, Subarctic, and Antarctic based primarily on differences in terrain condition, ground-ice volume, and heat and mass transfer processes. Typical Arctic thermokarst landforms include thermokarst lakes, collapsed pingos, sinkholes, and pits. Thermokarst is differentiated from thermal erosion, which refers to the erosion of the land surface by thermal and mechanical processes (Mackay, 1970; van Everdingen, 1998). Typical thermal erosional features include thermo-erosional gullies. Thermal abrasion is further differentiated from thermokarst and thermal erosion by association with the reworking of ocean, river, and lake bluffs (Are, 1988). Typical thermo-abrasion features include erosional niches at the base of bluffs. Thermal denudation is another distinct term that refers to the effect of incoming solar energy on the thaw of frozen slopes and permafrost bodies that subsequently become transported downhill by gravity (Shur and Osterkamp, 2007). Active layer detachment slides and thaw slumps are typical thermal denudation features. Shur and Osterkamp (2007) noted that these various transport processes may occur together with thermokarst or in instances that would not be considered thermokarst. This compilation of references regarding thermokarst and other thaw-related features is focused on the Arctic and the Subarctic. References were drawn from North America as well as Siberia. English-language literature mostly was targeted, with 167 references annotated in version 1.0; however, an additional 28 Russian-language references were taken from Shur and Osterkamp (2007) and are provided at the end of this document. This compilation may be missing key references and inevitably will become outdated soon after publication. We hope that this document, version 1.0, will serve as the foundation for a comprehensive compilation of thermokarst and permafrost-terrain stability references, and that it will be updated continually over the coming years.
The Cosumnes River watershed requires a 57–64 percent reduction in loads to meet the new Delta methylmercury (MeHg) total maximum daily load allocation, established by the Central Valley Regional Water Quality Control Board. Because there are no large point sources of MeHg in the watershed, the focus of MeHg load reductions will fall upon non-point sources, particularly the expansive wetlands considered to be a primary source of MeHg in the region. Few management practices have been implemented and tested in order to meet load reductions in managed wetlands, but recent efforts have shown promise. This project examines a treatment approach to reduce MeHg loads to the Sacramento-San Joaquin River Delta by creating open-water deep cells with a small footprint at the downstream end of wetlands to promote net demethylation of MeHg and to minimize MeHg and Hg loads exiting wetlands at the Cosumnes River Preserve. Specifically, the deep cells were were located immediately up gradient of the wetland’s outflow weir and were deep enough (75–91 centimeter depth) to be vegetation-free. The topographic and hydrologic structure of each treatment wetland was modified to include open-water deep cells so that the removal of aqueous MeHg might be enhanced through (1) particle settling, (2) photo-degradation, and (3) benthic microbial demethylation. These deep cells were, therefore, expected to clean MeHg from surface water prior to its discharge to the Cosumnes River and the downstream Delta. Our goal was to test whether the implementation of the deep cells within wetlands would minimize MeHg and total Hg export. Further, we sought to test whether continuous flow-through hydrology, would lower MeHg concentrations in resident biota, compared to traditional wetland management operations. The dominant practice in seasonal wetlands management is the “fill-and-maintain” approach, in which wetlands are filled with water and the water levels maintained without substantial draining until drawdown. Our approach was to create and characterize replicate treatment wetland complexes, in conjunction with monitoring of hydrologic, biologic, and chemical indicators of MeHg exposure for two full annual cycles within winter-spring flooded seasonal wetlands. In addition to the creation of deep cells within treatment wetlands, hydrology was manipulated so that there was a constant flow-through of water, while the control wetlands utilized the fill-and-maintain approach. Specifically, the treatment wetlands were maintained in a flow-through manner, while the control wetlands were maintained in a fill-and-maintain manner from September through May, to test the hypothesis that the flow of water through the seasonal wetland can lower fish bioaccumulation through dilution of MeHg-concentrated water within the wetland by constant inflows of water into the wetland. The major tasks of this study included: (1) field design and implementation, (2) water and wetland management, (3) hydrologic monitoring and water quality sampling, (4) MeHg export and load estimates, (5) caged fish experiments for examining MeHg bioaccumulation, (6) site and process characterization to improve understanding and transferability of results, (7) adaptive management, transferability, and outreach, and (8) reporting of results and conclusions. This report summarizes the key findings of this study, which focuses on MeHg load estimates from control and treatment wetlands, quantification of three MeHg removal mechanisms (particulate settling, benthic demethylation, and photo-demethylation) in the deep cells within the treatment wetlands, and MeHg bioaccumulation in wetland fishes. Key findings include: Over two years of study, mean whole-water MeHg load decreased 37 percent in deep cells, when comparing inlet of check weir flows to outlet. Of the 37 percent MeHg load removed within the deep cell, photodegradation accounted for 7 percent and particle flux to the benthos accounted for 24 percent of the mass removed, with the remaining 6 percent apparent MeHg loss unexplained. Benthic MeHg degradation did not appear to be a major MeHg removal process in the deep cells, as changes in the ambient MeHg pool over 7-day bottle incubations showed that the surface sediment exhibited net MeHg production in the majority (87 percent) of incubation experiments. In only 13 percent of the incubations (3 out of 24) was net MeHg degradation observed. Estimates of benthic diffusive flux of MeHg across the sediment/water interface were small relative to particulate flux and variable (positive or negative), suggesting this is likely a minor term in the overall MeHg budget within the deep cells. Although the deep cells served as net MeHg sink overall, MeHg export from the flow-through treatment wetlands (shallow and deep combined) exceeded export from the fill-and-maintain managed control wetlands, because of the differences in hydrologic management between the two wetland types. Shallow wetlands under flow-through conditions generated a net export of MeHg. Most of the annual MeHg export from the treatment wetlands occurred within the first 3 months of flood up (September to November), shortly after hydrologic management began. Despite the effectiveness of the deep cell in lowering MeHg export concentrations, total mercury (THg) concentration did not decrease in biosentinel fish ( Gambusia affinis , Mosquitofish) between the deep cell inlet and outlet. Mosquitofish THg concentrations were higher in treatment wetlands than in control wetlands during the first year of study, likely because of an associated increase in MeHg availability immediately following wetland construction activities. Mosquitofish THg concentrations declined in the treatment wetlands during the second year of study, and fish THg concentrations in treatment wetlands were no different from those in the control. Similarly, the increased hydrologic flow rates in the treatment wetlands did not lower fish THg concentrations nor aqueous MeHg concentrations in the shallow cells, suggesting that MeHg flux from the sediment to water column exceeded the flow-through flushing rate in the shallow portion of the treatment wetlands. Reductions in MeHg concentrations of surface water and fish may require higher flow rates than used in the study to achieve the region’s regulatory goals. However, the flow rates necessary may not be feasible for these managed wetlands because of limited water supply and the associated costs for water and pumping. The use of deep cells in seasonal wetlands were effective in lowering MeHg exports under continuous water flow-through hydrology. However, fill-and-maintain hydrology had lower exports overall, because of a single major drainage event at the end of the flood season. Future studies focused on limiting MeHg export should consider combining deep cells with the fill-and-maintain or fill-and-trickle hydrologic management approach.
A lagoon-wide, point-sampling survey of eelgrass ( Zostera marina ) abundance was conducted in Izembek Lagoon, Alaska, August 7–16, 2018, the ninth year of annual surveys (2007–11, 2015–18). Mean predicted aboveground biomass of eelgrass across 116 sampled points was 238 grams per square meter (g m-2) (95 percent confidence interval: 203–278 g m-2) in 2018, an increase of 240 percent from the previous year’s low estimate of 97 g m-2 (95 percent confidence interval: 78–120 g m-2). The increase marked the third year since 2015 where eelgrass biomass was above the long-term mean (158 g m-2). Eelgrass biomass was stable over the 9 years of this survey. A separate (transect) survey for eelgrass abundance at Grant Point-Old Boat Launch showed annual trends in eelgrass biomass similar to the lagoon-wide survey, but over a slightly longer time (2007–18). The estimates of above-average eelgrass biomass in Izembek Lagoon were likely influenced by relatively warm air temperatures and little or no ice in winter (air temperatures 2.7 degrees Celsius greater than the 12-year mean) and average (cool) air temperatures during the growing season (April–August) in 2018.
No abstract available.