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Wind River subbasin restoration: Annual report of US..Geological Survey activities, January 2018 through December 2018

We sampled juvenile wild Steelhead Oncorhynchus mykiss in headwater streams of the Wind River, WA, to characterize populations and investigate life-history metrics, particularly migratory patterns. We used Passive Integrated Transponder (PIT)-tagging and a series of instream PIT-tag interrogation systems (PTISs) to track juveniles. The Wind River subbasin is considered a wild Steelhead refuge by Washington Department of Fish and Wildlife (WDFW). No hatchery Steelhead have been planted in the Wind River subbasin since 1997, and hatchery adults are estimated to be less than one percent of spawners in most years (pers comm. Thomas Buehrens, Washington Department of Fish and Wildlife). Our repeated headwater sampling of consistent sites in the Wind River subbasin has also allowed us to track relative abundance of Brook Trout, a non-native species to the Wind River. Our work is contributing to understanding of Steelhead population response to numerous restoration actions in the subbasin, including removal of Hemlock Dam from Trout Creek in 2009, where our PTISs are helping to quantify adult response. Data from our study, and companion work by Washington Department of Fish and Wildlife, are contributing to Bonneville Power Administration’s (BPA) Research Monitoring and Evaluation (RM&E) Program Strategy of Fish Population Status Monitoring (www.cbfish.org/ProgramStrategy.mvc/ViewProgramStrategySummary/1). Specifically this work addresses the sub-strategies of: 1) Assessing the Status and Trends of Diversity of Natural Origin Fish Populations and to Uncertainties Research regarding differing life histories of a wild Steelhead population, 2) Assessing the Status and Trend of Adult Natural Origin Fish Populations, and 3) Monitoring and Evaluating the Effectiveness of Tributary Habitat Actions Relative to Environmental, Physical, or Biological Performance Objectives. Our headwaters parr PIT tagging, WDFW parr, smolt, and adult tagging and our instream PTISs are providing data on movements and life histories of parr, smolt, and adult Steelhead. During summer 2018, we PIT-tagged 1,592 age-0 and age-1 Steelhead parr in headwater areas of the Wind River subbasin to characterize population traits and investigate life-history diversity, including growth and pre-smolt downstream movement. Repeat headwater sampling and smolt trap operations provide opportunities for recapture, and instream PTISs and Columbia River infrastructure provide opportunity for detection of PIT-tagged fish. Throughout the year, we maintained a series of six instream PTISs to monitor movement of tagged Steelhead parr, smolts, and adults. Detections at the instream PTISs have demonstrated trends of age-0 and age-1 parr emigration from natal areas during summer and fall, in addition to the expected movement of parr and smolts in spring. Substantial numbers of parr make downstream movements as age-1 fish. We have estimated that from 15 to 33 percent of parr tagged as age-0 fish make downstream migrations at age-1 for additional rearing. We have estimated that from 1 to 27 percent of parr tagged as age-1 fish make downstream migrations during fall. These findings raise many questions about parr rearing strategies, habitat use, and success of these migrants and suggest a need for broader monitoring of juvenile Steelhead in some river systems to fully document juvenile production. Long-term monitoring of PIT-tagged fish is providing information on contribution of various life-history strategies to smolt production and adult returns. Movements of PIT-tagged adult Steelhead were recorded at instream PTISs. These data have allowed assessment of adult returns to tributary watersheds within the Wind River subbasin. Detection efficiency of adult PIT-tagged Steelhead at our primary adult-monitoring PTIS in Trout Creek has been greater than 92 percent during 6 of the past 7 years. This is providing excellent data to estimate adult returns to this watershed. Determination of adult use of tributary watersheds is providing data to help evaluate the efficacy of the removal of Hemlock Dam on Trout Creek. Hemlock Dam, located at rkm 2.0 of Trout Creek, was removed in summer 2009. The dam contributed to hydrologic impairment of Trout Creek and had potential negative effects on Steelhead. The improvements made to the upper Wind River PTIS (site code WRU at rkm 28.3; better site characteristics and grid power) during 2016 and 2017, and a planned new site in the Mine Reach of the upper Wind River, will allow estimates of subbasin adult escapement like those in Trout Creek. During 2018, we also completed planning and permitting with U.S. Forest Service for a new PTIS site at rkm 36 of the Wind River (the Mine Reach, mentioned above). This site will replace two sites (one in Paradise Creek and one at rkm 41 of the Wind River), which had operational challenges due to lack of adequate solar power and winter difficulties. The new Mine Reach PTIS site at rkm 36, will have better solar exposure, fewer winter operations difficulties, and provide opportunity to detect fish from juvenile sampling sites that were downstream of the previous two PTISs. The more consistent operation of the new Mine Reach PTIS site will increase our ability to estimate migrant abundance as all the juveniles tagged upstream of it will be subject to the same potential detection history, instead of three different potential detection histories as before. Additionally, with the new Mine Reach PTIS site lower in the watershed, it will subject more PIT-tagged adult Steelhead to detection and provide ability to generate a nonbiased adult-detection efficiency estimate for the WRU PTIS at rkm 28.3 of the Wind River. This will provide the opportunity to estimate yearly adult Steelhead abundance to the upper Wind watershed area. Permitting is complete and some supplies have been purchased to build and install this new site in 2019. Repeat sampling at consistent locations in the subbasin has allowed investigation into juvenile Steelhead growth patterns. Growth rates (relative change in weight) of age-0 PIT-tagged parr during summer are similar across the subbasin, but lower for age-1 parr in the Trout Creek watershed than the upper Wind River watershed. Yearly growth for parr tagged at age-0 is similar across the subbasin. Yearly growth for parr tagged at age-1 is lowest in Martha Creek, but similar elsewhere. Non-native Brook Trout are present in portions of the subbasin, chiefly the Trout Creek watershed, and repeat sampling has allowed us to index their prevalence. Percentage of catch that is Brook Trout at each of four sample sites in Trout Creek have declined from the period 1998 – 2003 to the period 2011 – 2018. There was a pattern of decline in percent of catch and number of Brook Trout at the Trout Creek sites from 2011 through 2016, though a slight upward trend during 2017 and 2018 has been evident. Evaluating and planning restoration efforts are of interest to many managers and agencies to ensure efficient use of resources. The evaluation of various life-histories of Steelhead within the Wind River subbasin will provide information to better track populations, and to direct habitat restoration and water allocation planning. Movement of Steelhead parr raises many questions regarding estimating juvenile abundance, origin, and habitat use within watersheds. Improved PTISs and focused PIT tagging of age-0 and age-1 Steelhead parr are increasingly allowing us to investigate such questions. Increasingly detailed Viable Salmonid Population information, such as that provided by PIT-tagging and instream PTISs networks like those in the Wind River subbasin, provide data to inform policy and management, as life-history strategies and production bottlenecks are identified and understood.

Washington↗

The Chernobyl Nuclear Power Plant accident: ecotoxicological update

The accident at the Chernobyl, Ukraine, nuclear reactor on 26 April 1986 released large amounts of radiocesium and other radionuclides into the environment, contaminating much of the northern hemisphere, especially Europe. In the vicinity of Chernobyl, at least 30 people died, more than 115,000 others were evacuated, and consumption of milk and other foods was banned because of radiocontamination. At least 14,000 human cancer deaths are expected in Russia, Belarus, and the Ukraine as a direct result of Chernobyl. The most sensitive local ecosystems, as judged by survival, were the soil fauna, pine forest communities, and certain populations of rodents. Elsewhere, fallout from Chernobyl significantly contaminated freshwater and terrestrial ecosystems and flesh and milk of domestic livestock; in many cases, radionuclide concentrations in biological samples exceeded current radiation protection guidelines. Reindeer (Rangifer tarandus) in Scandinavia were among the most seriously afflicted by Chernobyl fallout, probably because their main food during winter (lichens) is an efficient absorber of airborne particles containing radiocesium. Some reindeer calves contaminated with 137Cs from Chernobyl showed 137Cs-dependent decreases in survival and increases in frequency of chromosomal aberrations. Although radiation levels in the biosphere are declining with time, latent effects of initial exposure--including an increased frequency of thyroid and other cancers--are now measurable. The full effect of the Chernobyl nuclear reactor accident on natural resources will probably not be known for at least several decades because of gaps in data on long-term genetic and reproductive effects and on radiocesium cycling and toxicokinetics.

Book chapter↗

Updates for Wake Atoll biosecurity management, biological control, survey, and management, and integrated pest management plans

Pests and invasive species have been defined as any organism that can have real or perceived adverse effects on operations, or the well-being of personnel, native plants, animals, their environment and ecosystem processes; attack or damage real property, supplies, equipment, or are otherwise undesirable (paraphrased from many sources including 53 Federal Register [FR] 15975, May 4, 1988, as amended at 78 FR 13507, February 28, 2013). Biosecurity programs and pest management plans can be developed and implemented with the goals of preventing the arrival of or eradication or control of pests and invasive species to reduce the potential for adverse effects. Such plans have been developed for Wake Atoll (U.S. Air Force, unpub. data 2017). Periodic plan reviews are an integral step for evaluating plan efficacy and updating plans with new information for improving plan effectiveness. This report summarizes an evaluation of past, current, and potential biosecurity and pest management for Wake with the intent this information can be used for updating existing plans. This document was prepared in cooperation with the U.S. Air Force (USAF) and surveys were performed for the 611th Civil Engineer Squadron Natural Resources Program ACES PROJECT no. YGFZ17002 under agreement number F2MUAA7116GW01 between the USAF and the U.S. Geological Survey’s Western Ecological Research Center (USGS-WERC).

Open-File Report↗

Assessment of effects of channelization mitigation alternatives of Stoney Brook, Carlton and St. Louis Counties, Minnesota

The U.S. Geological Survey, in cooperation with the Fond du Lac Band of Lake Superior Chippewa (FDLB), studied the effects of channel modification alternatives on lake levels and floodplain inundation in the Stoney Brook watershed in northeast Minnesota. Northern wild rice ( Zizania palustris ), also referred to as manoomin by the Ojibwe/Chippewa people, is a natural and cultural resource to the FDLB and is sensitive to water levels and rates of water-level changes, particularly during the early stages of growth. Drainage ditches constructed in the early 1900s in the Stoney Brook watershed lowered lake-water levels, caused greater fluctuations in the lakes, and created a loss in wetland coverage. The FDLB is committed to minimizing large fluctuations of the lakes with natural wild rice production in the Stoney Brook watershed and restoring a more natural hydrology to Stoney Brook. The hydrologic response of these lakes and floodplain storage to simulated channel modification alternatives were examined. Hydrologic and hydraulic models were developed for the watershed and calibrated to historical rainfall events. The models used probabilistic frequency rainfall events of 24-hour duration for 1-, 2-, 5-, and 10-year annual recurrence intervals (100-, 50-, 20-, and 10-percent annual exceedance probability) to simulate watershed management scenarios with existing and alternative conditions. The hydraulic model outputs for peak flows, volume accumulation, water levels, and inundation duration and depths were assessed to quantify the effects of the channel modification alternatives. The channel modification alternatives were simulated with four different terrain conditions: existing conditions, bank spoil breach, original channel reconnection, and original channel reconnection with bank spoil breach. Hydrologic characteristics from six distinct areas were used in the model to evaluate the effects from the channel modification alternatives. The simulated results of two lakes in which wild rice was planted demonstrated that the lakes would take longer to draw down following an event with the channel modification alternatives compared to existing conditions with little change to peak water-surface elevations. The alternatives provided minor to no increases in flows or conveyances at the downstream reference location at Pine Drive bridge. The restored floodplain locations had increased flows and conveyances for the channel modification alternatives that could be considered substantial when compared to flows with existing conditions. The inundation extent, duration, and water-depth distribution were assessed within selected floodplain areas. Generally, the channel modification alternatives produced increases in the higher depth (3–4 and greater than 4 feet) and duration (10–14 and greater than 14 days) categories for these areas, which may be beneficial to increases in wetland coverage and floodplain storage.

Minnesota↗

The importance of physiological ecology in conservation biology

Many of the threats to the persistence of populations of sensitive species have physiological or pathological mechanisms, and those mechanisms are best understood through the inherently integrative discipline of physiological ecology. The desert tortoise was listed under the Endangered Species Act largely due to a newly recognized upper respiratory disease thought to cause mortality in individuals and severe declines in populations. Numerous hypotheses about the threats to the persistence of desert tortoise populations involve acquisition of nutrients, and its connection to stress and disease. The nutritional wisdom hypothesis posits that animals should forage not for particular food items, but instead, for particular nutrients such as calcium and phosphorus used in building bones. The optimal foraging hypothesis suggests that, in circumstances of resource abundance, tortoises should forage as dietary specialists as a means of maximizing intake of resources. The optimal digestion hypothesis suggests that tortoises should process ingesta in ways that regulate assimilation rate. Finally, the cost-of-switching hypothesis suggests that herbivores, like the desert tortoise, should avoid switching food types to avoid negatively affecting the microbe community responsible for fermenting plants into energy and nutrients. Combining hypotheses into a resource acquisition theory leads to novel predictions that are generally supported by data presented here. Testing hypotheses, and synthesizing test results into a theory, provides a robust scientific alternative to the popular use of untested hypotheses and unanalyzed data to assert the needs of species. The scientific approach should focus on hypotheses concerning anthropogenic modifications of the environment that impact physiological processes ultimately important to population phenomena. We show how measurements of such impacts as nutrient starvation, can cause physiological stress, and that the endocrine mechanisms involved with stress can result in disease. Finally, our new syntheses evince a new hypothesis. Free molecules of the stress hormone corticosterone can inhibit immunity, and the abundance of "free corticosterone" in the blood (thought to be the active form of the hormone) is regulated when the corticosterone molecules combine with binding globulins. The sex hormone, testosterone, combines with the same binding globulin. High levels of testosterone, naturally occurring in the breeding season, may be further enhanced in populations at high densities, and the resulting excess testosterone may compete with binding globulins, thereby releasing corticosterone and reducing immunity to disease. This sequence could result in physiological and pathological phenomena leading to population cycles with a period that would be essentially impossible to observe in desert tortoise. Such cycles could obscure population fluctuations of anthropogenic origin. ?? 2006 The Author(s).

Conference Paper↗

Plant-derived products selectively suppress growth of the harmful alga Prymnesium parvum

Prymnesium parvum is a harmful alga found in brackish waters worldwide whose toxins can be lethal to aquatic organisms. Established field methods to control blooms of this species, however, are unavailable. Earlier studies showed that various extracts of giant reed ( Arundo donax ) can suppress P. parvum growth and that ellipticine, an allelochemical present in giant reed, is a potent algicide against this species. The unintended effects of giant reed products on nontarget organisms, however, are not fully understood. This study determined the effects of giant reed leachate (aqueous extract of dried chips) and ellipticine on growth of P. parvum and the green microalga Chlorella sorokiniana ; survival and reproduction of the planktonic crustacean Daphnia pulex ; and hatching success, larval survival, and larval swimming behavior of the teleost fish Danio rerio . Leachate made with 3 g chips L −1 was lethally toxic to P. parvum and D. pulex , stimulated C. sorokiniana growth, and impaired D. rerio behavior. Leachate at 1 g L −1 fully suppressed P. parvum growth, had moderate effects on D. pulex reproductive output, and had no effects on D. rerio . Ellipticine at 0.01 mg L −1 irreversibly inhibited P. parvum growth, acutely but reversibly inhibited C. sorokiniana growth, slightly delayed D. pulex reproduction, and had no effects on D. rerio . These observations suggest that when applied at appropriate concentrations, natural products derived from giant reed can be used as tools to specifically control P. parvum growth with minimal effects on nontarget species.

Water↗

Dissolved organic matter compositional change and biolability during two storm runoff events in a small sgricultural watershed

Agricultural watersheds are globally pervasive, supporting fundamentally different organic matter source, composition, and concentration profiles in comparison to natural systems. Similar to natural systems, agricultural storm runoff exports large amounts of organic carbon from agricultural land into waterways. But intense management of upper soil layers, waterway channelization, wetland and riparian habitat removal, and postharvest vegetation removal promise to uniquely drive organic matter release to waterways. During a winter first flush and a subsequent storm event, this study investigated the influence of a small agricultural watershed on dissolved organic matter (DOM) source, composition, and biolability. Storm water discharge released strongly terrestrial yet biolabile (23 to 32%) dissolved organic carbon (DOC). Following a 21 day bioassay, a parallel factor analysis identified an 80% reduction in a protein-like (phenylpropyl) component (C2) that was previously correlated to lignin phenol concentration, and a 10% reduction in a humic-like, terrestrially sourced component (C4). Storm-driven releases tripled DOC concentration (from 2.8 to 8.7 mg L −1 ) during the first flush event in comparison to base flow and were terrestrially sourced, with an eightfold increase in vascular plant derived lignin phenols (23.0 to 185 μg L −1 ). As inferred from system hydrology, lignin composition, and nitrate as a groundwater tracer, an initial pulse of dilute water from the upstream watershed caused a counterclockwise DOC hysteresis loop. DOC concentrations peaked after 3.5 days, with the delay between peak discharge and peak DOC attributed to storm water hydrology and a period of initial water repellency of agricultural soils, which delayed DOM leaching.

California↗

Identifying the pollen of an extinct spruce species in the Late Quaternary sediments of the Tunica Hills region, south-eastern United States

Late Quaternary fluvial deposits in the Tunica Hills region of Louisiana and Mississippi are rich in spruce macrofossils of the extinct species Picea critchfieldii , the one recognized plant extinction of the Late Quaternary. However, the morphology of P. critchfieldii pollen is unknown, presenting a barrier to the interpretation of pollen spectra from the last glacial of North America. To address this issue, we undertook a morphometric study of Picea pollen from Tunica Hills. Morphometric data, together with qualitative observations of pollen morphology using Apotome fluorescence microscopy, indicate that Picea pollen from Tunica Hills is morphologically distinct from the pollen of P. glauca , P. mariana and P. rubens . Measurements of grain length, corpus width and corpus height indicate that Picea pollen from Tunica Hills is larger than the pollen of P. mariana and P. rubens , and is slightly larger than P. glauca pollen. We argue that the morphologically distinctive Tunica Hills Picea pollen was probably produced by the extinct spruce species P. critchfieldii . These morphological differences could be used to identify P. critchfieldii in existing and newly collected pollen records, which would refine its paleoecologic and biogeographic history and clarify the nature and timing of its extinction in the Late Quaternary.

Louisiana, Mississippi↗

Impacts of climate changes and amplified natural disturbance on global ecosystems

Natural disturbances maintain biological diversity and landscape heterogeneity and initiate ecosystem renewal and reorganization. However, the severity, frequency, and extent of many disturbances have increased substantially in recent decades as the result of anthropogenic climate change. Disturbances can be discrete, short-duration events, such as wildfires or hurricanes, or can exert persistent, cumulative stresses on an ecosystem (for example, ongoing warming of ocean or land surface temperatures). Landscape and ecosystem impacts can occur from a single disturbance, from several disturbances acting independently, or from the interactions of multiple, linked disturbances. Key, climate-related disturbances affecting global biomes and ecosystems include shifting temperature and hydrologic regimes (for example, warming surface temperatures and increasing aridity), increased frequency and magnitude of extreme events such as heatwaves, severe droughts, storms, and hurricanes, warming-induced permafrost thaw, and heightened wildfire activity and insect-caused tree mortality. For ecosystems and landscapes, the consequences of climate-amplified disturbance include forced poleward and upward movement of plant and animal species, widespread tree mortality and reduced forest productivity, changes in plant community structure and species distributions, reduced biodiversity, increased erosion, debris flows, wetland dynamism, declining sea ice extent, more frequent storm-driven tides and saltwater intrusion, and increased landscape flammability.

Book chapter↗

Dryland mechanisms could widely control ecosystem functioning in a drier and warmer world

Responses of terrestrial ecosystems to climate change have been explored in many regions worldwide. While continued drying and warming may alter process rates and deteriorate the state and performance of ecosystems, it could also lead to more fundamental changes in the mechanisms governing ecosystem functioning. Here we argue that climate change will induce unprecedented shifts in these mechanisms in historically wetter climatic zones, towards mechanisms currently prevalent in dry regions, which we refer to as ‘dryland mechanisms’. We discuss 12 dryland mechanisms affecting multiple processes of ecosystem functioning, including vegetation development, water flow, energy budget, carbon and nutrient cycling, plant production and organic matter decomposition. We then examine mostly rare examples of the operation of these mechanisms in non-dryland regions where they have been considered irrelevant at present. Current and future climate trends could force microclimatic conditions across thresholds and lead to the emergence of dryland mechanisms and their increasing control over ecosystem functioning in many biomes on Earth.

Nature Ecology & Evolution↗

Where temperate meets tropical: Multi-factorial effects of elevated CO2, nitrogen enrichment, and competition on a mangrove-salt marsh community

Our understanding of how elevated CO 2 and interactions with other factors will affect coastal plant communities is limited. Such information is particularly needed for transitional communities where major vegetation types converge. Tropical mangroves ( Avicennia germinans ) intergrade with temperate salt marshes ( Spartina alterniflora ) in the northern Gulf of Mexico, and this transitional community represents an important experimental system to test hypotheses about global change impacts on critical ecosystems. We examined the responses of A. germinans (C 3 ) and S. alterniflora (C 4 ), grown in monoculture and mixture in mesocosms for 18 months, to interactive effects of atmospheric CO 2 and pore water nitrogen (N) concentrations typical of these marshes. A. germinans , grown without competition from S. alterniflora , increased final biomass (35%) under elevated CO 2 treatment and higher N availability. Growth of A. germinans was severely curtailed, however, when grown in mixture with S. alterniflora , and enrichment with CO 2 and N could not reverse this growth suppression. A field experiment using mangrove seedlings produced by CO 2 ‐ and N‐enriched trees confirmed that competition from S. alterniflora suppressed growth under natural conditions and further showed that herbivory greatly reduced survival of all seedlings. Thus, mangroves will not supplant marsh vegetation due to elevated CO 2 alone, but instead will require changes in climate, environmental stress, or disturbance to alter the competitive balance between these species. However, where competition and herbivory are low, elevated CO 2 may accelerate mangrove transition from the seedling to sapling stage and also increase above‐ and belowground production of existing mangrove stands, particularly in combination with higher soil N.

Louisiana↗

Modeled production, oxidation, and transport processes of wetland methane emissions in temperate, boreal, and Arctic regions

Wetlands are the largest natural source of methane (CH 4 ) to the atmosphere. The eddy covariance method provides robust measurements of net ecosystem exchange of CH 4 , but interpreting its spatiotemporal variations is challenging due to the co-occurrence of CH 4 production, oxidation, and transport dynamics. Here, we estimate these three processes using a data-model fusion approach across 25 wetlands in temperate, boreal, and Arctic regions. Our data-constrained model—iPEACE—reasonably reproduced CH 4 emissions at 19 of the 25 sites with normalized root mean square error of 0.59, correlation coefficient of 0.82, and normalized standard deviation of 0.87. Among the three processes, CH 4 production appeared to be the most important process, followed by oxidation in explaining inter-site variations in CH 4 emissions. Based on a sensitivity analysis, CH 4 emissions were generally more sensitive to decreased water table than to increased gross primary productivity or soil temperature. For periods with leaf area index (LAI) of ≥20% of its annual peak, plant-mediated transport appeared to be the major pathway for CH 4 transport. Contributions from ebullition and diffusion were relatively high during low LAI (<20%) periods. The lag time between CH 4 production and CH 4 emissions tended to be short in fen sites (3 ± 2 days) and long in bog sites (13 ± 10 days). Based on a principal component analysis, we found that parameters for CH 4 production, plant-mediated transport, and diffusion through water explained 77% of the variance in the parameters across the 19 sites, highlighting the importance of these parameters for predicting wetland CH 4 emissions across biomes. These processes and associated parameters for CH 4 emissions among and within the wetlands provide useful insights for interpreting observed net CH 4 fluxes, estimating sensitivities to biophysical variables, and modeling global CH 4 fluxes.

Global Change Biology↗

Global patterns of tree stem growth and stand aboveground wood production in mangrove forests

Mangrove forests provide important ecological and economic services including carbon sequestration and storage. The conservation and restoration of mangroves are expected to play an important role in mitigating climate change, and understanding the factors influencing mangrove stem growth and wood production are important in predicting and improving mangrove carbon sequestration and responses to environmental change. In this study, we collected data of individual diameter at breast height (DBH) growth rate and stand level aboveground wood production in both non-plantation (commonly termed as natural) mangroves and mangrove plantations across the world. Climatic factors, proxies of edaphic factors, as well as biological factors (e.g. mangrove species) were included as explanatory variables in the analyses to determine factors influencing the global patterns of tree growth rate and stand wood production of mangroves. Using hierarchical Classification and Regression Tree (CART) analysis we found interactions among environmental and biological factors in controlling mangrove tree growth rate and stand wood production. We also found different global patterns of tree growth rate and stand wood production between non-plantation mangroves and plantations. Climatic conditions (precipitation of driest season, precipitation seasonality) were the most important factors influencing the global pattern of tree DBH growth rate in non-plantation mangroves, with edaphic and biological characteristics also playing a role under specific climatic conditions. The global pattern of stand wood production in non-plantation mangroves was primarily determined by stand mean DBH growth rate of individual trees. However, in mangrove plantations management measures, specifically species selection and planting density, were the most important factors influencing the global patterns of tree growth rate and stand wood production. Our study provides parameters for a global estimation of long-term carbon sequestration in both non-plantation mangroves and mangrove plantations. In addition, our results help us better predict the dynamics of tree growth and carbon sequestration of non-plantation mangroves under changing climate.

Forest Ecology and Management↗

Global hotspots and correlates of alien species richness across taxonomic groups

Human-mediated transport beyond biogeographic barriers has led to the introduction and establishment of alien species in new regions worldwide. However, we lack a global picture of established alien species richness for multiple taxonomic groups. Here, we assess global patterns and potential drivers of established alien species richness across eight taxonomic groups (amphibians, ants, birds, freshwater fishes, mammals, vascular plants, reptiles and spiders) for 186 islands and 423 mainland regions. Hotspots of established alien species richness are predominantly island and coastal mainland regions. Regions with greater gross domestic product per capita, human population density, and area have higher established alien richness, with strongest effects emerging for islands. Ants and reptiles, birds and mammals, and vascular plants and spiders form pairs of taxonomic groups with the highest spatial congruence in established alien richness, but drivers explaining richness differ between the taxa in each pair. Across all taxonomic groups, our results highlight the need to prioritize prevention of further alien species introductions to island and coastal mainland regions globally.

Nature Ecology & Evolution↗

Development of a macrophyte-based index of biotic integrity for Minnesota lakes

Traditional approaches for managing aquatic resources have often failed to account for effects of anthropogenic disturbances on biota that are not directly reflected by chemical and physical proxies of environmental condition. The index of biotic integrity (IBI) is a potentially effective assessment method to integrate ecological, functional, and structural aspects of aquatic systems. A macrophyte-based IBI was developed for Minnesota lakes to assess the ability of aquatic plant communities to indicate environmental condition. The index was developed using quantitative point intercept vegetation surveys for 97 lakes that represent a range of limnological and watershed characteristics. We followed an approach similar to that used in Wisconsin to develop the aquatic macrophyte community index (AMCI). Regional adaptation of the AMCI required the identification of species representative of macrophyte communities in Minnesota. Metrics and scaling methods were also substantially modified to produce a more empirically robust index. Regression analyses indicated that IBI scores reflected statewide differences in lake trophic state (R2 = 0.57, F = 130.3, df = 1, 95, p < 0.005), agricultural (R2 = 0.51, F = 83.0, df = 1, 79, p < 0.005), urban (R2 = 0.22, F = 23.0, df = 1, 79, p < 0.005), and forested land uses (R2 = 0.51, F = 84.7, df = 1, 79, p < 0.005), and county population density (R2 = 0.14, F = 16.6, df = 1, 95, p < 0.005). Variance partitioning analyses using multiple regression models indicated a unique response of the IBI to human-induced stress separate from a response to natural lake characteristics. The IBI was minimally affected by differences in sample point density as indicated by Monte Carlo analyses of reduced sampling effort. Our analysis indicates that a macrophyte IBI calibrated for Minnesota lakes could be useful for identifying differences in environmental condition attributed to human-induced stress gradients. ?? 2010 Elsevier Ltd.

Ecological Indicators↗

Sea otters and kelp forests in Alaska: Generality and variation in a community ecological paradigm

Multiscale patterns of spatial and temporal variation in density and population structure were used to evaluate the generality of a three—trophic—level cascade among sea otters (Enhydra lutris), invertebrate herbivores, and macroalgae in Alaska. The paradigm holds that where sea otters occur herbivores are rare and plants are abundant, whereas when sea otters are absent herbivores are relatively common and plants are rare. Spatial patterns were based on 20 randomly placed quadrats at 153 randomly selected sites distributed among five locations with and four locations without sea otters. Both sea urchin and kelp abundance differed significantly among locations with vs. without sea otters in the Aleutian Islands and southeast Alaska. There was little (Aleutian Islands) or no (southeast Alaska) overlap between sites with and without sea otters, in plots of kelp density against urchin biomass. Despite intersite variation in the abundance of kelps and herbivores, these analyses demonstrate that sea otter predation has a predictable and broadly generalizable influence on the structure of Alaskan kelp forests. The percent cover of algal turf and suspension feeder assemblages also differed significantly (although less dramatically) between locations with and without sea otters. Temporal variation in community structure was assessed over periods of from 3 to 15 yr at sites in the Aleutian Islands and southeast Alaska where sea otters were 1) continuously present, 2) continuously absent, or 3) becoming reestablished because of natural range expansion. Kelp and sea urchin abundance remained largely unchanged at most sites where sea otters were continuously present or absent, the one exception being at Torch Bay (southeast Alaska), where kelp abundance varied significantly through time and urchin abundance varied significantly among sites because of episodic and patchy disturbances. In contrast, kelp and sea urchin abundances changed significantly, and in the expected directions, at sites that were being recolonized by sea otters. Sea urchin biomass declined by 50% in the Aleutian Islands and by nearly 100% in southeast Alaska following the spread of sea otters into previously unoccupied habitats. In response to these different rates and magnitudes of urchin reduction by sea otter predation, increases in kelp abundance were abrupt and highly significant in southeast Alaska but much smaller and slower over similar time periods in the Aleutian Islands. The different kelp colonization rates between southeast Alaska and the Aleutian Islands appear to be caused by large—scale differences in echinoid recruitment coupled with size—selective predation by sea otters for larger urchins. The length of urchin jaws (correlated with test diameter, r 2 = 0.968) in sea otter scats indicates that sea urchins <15—20 mm test diameter are rarely eaten by foraging sea otters. Sea urchin populations in the Aleutian Islands included high densities of small individuals (<20 mm test diameter) at all sites and during all years sampled, whereas in southeast Alaska similarly sized urchins were absent from most populations during most years. Small (<30—35 mm test diameter) tetracycline—marked urchins in the Aleutian Islands grew at a maximum rate of °10 mm/yr; thus the population must have significant recruitment annually, or at least every several years. In contrast, echinoid recruitment in southeast Alaska was more episodic, with many years to perhaps decades separating significant events. Our findings help explain regional differences in recovery rates of kelp forests following recolonization by sea otters.

Alaska↗

Effectiveness of environmental flows for riparian restoration in arid regions: A tale of four rivers

Environmental flows have become important restoration tools on regulated rivers. However, environmental flows are often constrained by other demands within the river system and thus typically are comprised of smaller water volumes than the natural flows they are meant to replace, which can limit their functional efficacy. We review environmental flow programs aimed at restoring riparian vegetation on four arid zone rivers: the Tarim River in China; the Bill Williams River in Arizona, U.S.; the delta of the Colorado River in Mexico; and the Murrumbidgee River in southern Australia. Our goal is to determine what worked and what did not work to accomplish restoration goals. The lower Tarim River in China formerly formed a “green corridor” across the Taklamakan Desert. The riparian zone deteriorated due to diversion of surface and groundwater for irrigated agriculture. A massive restoration program began in 2000 with release of 1038 million cubic meters of water over the first three years. Groundwater levels rose but the ecological response was less than expected politically, socially and within the scientific community. However, releases continued and by 2015 portions of the original iconic Populus euphratica (Euphrates poplar) forest were reestablished. The natural flow regime of the Bill Williams River was disrupted by construction of a dam in 1968, dramatically reducing peak flows along with associated fluvial processes. As a result, the channel narrowed and riparian vegetation expanded and was comprised largely of an introduced shrub species ( Tamarix spp.). Environmental flow releases including small, managed floods and sustained base flows have been implemented since the mid 1990’s to promote establishment and maintenance of native riparian trees (cottonwoods and willows) and have been successful, although in a “downsized” portion of the valley bottom. Experience from the Bill Williams was used to help design the Minute 319 environmental flow in the delta of the Colorado River in 2014. Water was released as a short, one-time pulse during spring with the intent of starting new cohorts of cottonwood and willow. However, fluvial disturbance was limited by the relatively small magnitude pulse, low flows did not continue throughout the growing season in some reaches, native tree recruitment was low, and most of the new plants recruited were Tamarix . The inundated portion of the floodplain did respond with a temporary increase in greenness as measured by satellite vegetation indices, however. The Murrumbidgee River in Australia is a tributary in the Murray-Darling River Basin, which supports iconic red gum ( Eucalyptus camaldulensis ) forests that depend on near-yearly floods for maintenance. During the recent Millennial Drought (2000–2010) environmental flows were provided on an experimental basis to small portions of the Yanga National Forest to see how much water was needed. As with the Colorado River delta, gains in vegetation vigor as measured by satellite vegetation indices following the flows were temporary. Environmental flows in the Bill Williams were able to restore enough overbank flooding and fluvial disturbance to promote some establishment of new cohorts of trees, but on the Colorado and Murrumbidgee Rivers larger volumes of total flows released over longer periods and targeted restoration will be needed to restore the ecosystems. A measure of success in restoring the Euphrates poplar forest on the Tarim and germinating new chorts of willows on the Bill Williams has been achieved after 15–20 years of environmental flows, but the Colorado River delta and Murrumbidgee Rivers have only received one or two flows. Success in enhancing native trees in the Colorado delta has been achieved in restoration plots, but the Murrumbidgee will require large overbank flows on a continuing schedule to rejuvenate the red gum forest.

Ecological Engineering↗

Reducing greenhouse gas emissions of Amazon hydropower with strategic dam planning

Hundreds of dams have been proposed throughout the Amazon basin, one of the world’s largest untapped hydropower frontiers. While hydropower is a potentially clean source of renewable energy, some projects produce high greenhouse gas (GHG) emissions per unit electricity generated (carbon intensity). Here we show how carbon intensities of proposed Amazon upland dams (median = 39 kg CO 2 eq MWh −1 , 100-year horizon) are often comparable with solar and wind energy, whereas some lowland dams (median = 133 kg CO 2 eq MWh −1 ) may exceed carbon intensities of fossil-fuel power plants. Based on 158 existing and 351 proposed dams, we present a multi-objective optimization framework showing that low-carbon expansion of Amazon hydropower relies on strategic planning, which is generally linked to placing dams in higher elevations and smaller streams. Ultimately, basin-scale dam planning that considers GHG emissions along with social and ecological externalities will be decisive for sustainable energy development where new hydropower is contemplated.

Nature Communications↗