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USGS2003

Flooding Associated with Typhoon Chata'an, July 5, 2002, Guam

Introduction On July 5, 2002, starting at about 8 a.m., the southern half of the eye of Typhoon Chata'an passed directly over the northern part of the island of Guam. Data collected on Guam indicate that the typhoon had sustained winds of 85 to 90 miles per hour (mi/hr) with gusts of up to 115 mi/hr (Charles Guard, National Weather Service, written commun., 2003). Storm rainfall totals exceeded 21 inches (in.) over the mountainous areas in south-central Guam. During the peak of the storm, rain fell at rates of up to 6.48 inches per hour (in/hr). Because of the damage caused by Typhoon Chata'an, the President signed a major disaster declaration on July 6, 2002. Damages associated with Typhoon Chata'an, while considered moderate relative to other storms that have affected Guam, amounted to several tens of millions of dollars. In excess of 1,000 single-family and multi-family homes were either extensively damaged or destroyed. Electrical power was out for several days over most of the island and no potable water was available through public distribution systems (Federal Emergency Management Agency, 2002). The extreme rainfall led to flooding in southern Guam and caused numerous landslides and severe erosion along water courses. The most significant evidence of these effects could be found in the Fena Valley Reservoir, where elevated sediment concentrations made the water unsuitable for use as a domestic water supply for several days. During normal operation, Fena Valley Reservoir supplies most of the drinking water for the military and some of the general public in southern Guam. All of the stream-gaging stations operated by the U.S. Geological Survey (USGS) on Guam were damaged to some extent during the flood and three of the stations were totally destroyed. Peak flows in many rivers in southern Guam reached record levels during Typhoon Chata'an. New record peak stages and/or flows of record occurred at 14 of 15 sites where the USGS has collected data. In some areas, the magnitude of flood peaks exceeded previous records significantly. Peak flows had recurrence intervals of 80 years or more at 9 of the 13 sites where sufficient data were available to make the computations. Four of the 9 sites had recurrence intervals that were determined to be greater than 100 years. In this fact sheet, storm rainfall totals and maximum rainfall totals for durations of 1-, 3-, 6-, and 12-hours are summarized for 12 rain gages on Guam. Peak stages and/or flows were computed at 15 USGS streamflow-gaging stations and recurrence intervals for the peaks determined. Rainfall and streamflow-gaging stations operated by the USGS on Guam are supported by funding provided by numerous agencies including the U.S. Navy, the U.S. Army Corps of Engineers (USACE), and the University of Guam through the Water and Environmental Research Institute (WERI). The USGS Office of Surface Water, as part of a national program to document the effects of extreme floods in the United States, provided funding to support the preparation of this fact sheet.

Fact Sheet↗

USGS2011

Using host-associated genetic markers to investigate sources of fecal contamination in two Vermont streams

The use of host-associated Bacteroidales-based 16S ribosomal ribonucleic acid genetic markers was investigated as a tool for providing information to managers on sources of bacterial impairment in Vermont streams. The study was conducted during 2009 in two watersheds on the U.S. Environmental Protection Agency's 303(d) List of Impaired Waters, the Huntington and the Mettawee Rivers. Streamwater samples collected during high-flow and base-flow conditions were analyzed for concentrations of Escherichia coli (E. coli) and Bacteroidales genetic markers (General AllBac, Human qHF183 and BacHum, Ruminant BoBac, and Canid BacCan) to identify humans, ruminants, and canids as likely or unlikely major sources of fecal contamination. Fecal reference samples from each of the potential source groups, as well as from common species of wildlife, were collected during the same season and from the same watersheds as water samples. The results were combined with data from other states to assess marker cross reaction and to relate marker results to E. coli, the regulated water-quality parameter, with a higher degree of statistical significance. Results from samples from the Huntington River collected under different flow conditions on three dates indicated that humans were unlikely to be a major source of fecal contamination, except for a single positive result at one station that indicated the potential for human sources. Ruminants (deer, moose, cow, or sheep) were potential sources of fecal contamination at all six stations on the Huntington River during one high-flow event and at all but two stations during the other high-flow event. Canids were potential sources of fecal contamination at some stations during two high-flow events, with genetic-marker concentrations in samples from two of the six stations showing consistent positive results for canids for both storm dates. A base-flow sample showed no evidence of major fecal contamination in the Huntington River from humans, ruminants, or canids. Results from samples from the Mettawee River watershed collected during high-flow conditions (12 storm samples on 2 dates at 6 stations) indicated that there was no evidence of fecal contamination from humans in seven samples and possible evidence in five samples. Results for humans were positive for only one station during both storm events. For two of the five samples with evidence for human fecal contamination, results for two different human genetic markers agreed, but results from three samples were inconsistent. In samples from five of the six Mettawee stations, ruminants were a potential source of fecal contamination on at least one of the three sampled dates, including three positive results for the base-flow sample. Yet samples from all of the stations that showed positive results for ruminants did so for only one or two of the three sampled dates. Samples from only one of the six stations gave consistent results, which were negative for ruminants for all three dates. In the Mettawee River base-flow sample, humans were an unlikely source of major fecal contamination. Factors that may influence results and conclusions include the timing of sample collection relative to the storm event; variability of E. coli and Bacteroidales concentrations in fecal reference samples and in water; sampling and analytical errors; the potential cross reactivity of host-associated genetic markers; and different persistence and survival rates of E. coli bacteria and Bacteroidales genetic markers on land, in water, and by season. These factors interfere with the ability to directly relate Bacteroidales concentrations to E. coli concentrations in river samples. It must be recognized that while use of Bacteroidales genetic markers as a source tracking tool coupled with the interpretive approach described in this report cannot be used quantitatively to pinpoint sources, it can be used to exclude potential sources as major contributors to fecal contamination.

Vermont↗

USGS2004

Use of 87 Sr/ 86 Sr and δ 11 B to Identify Slag-Affected Sediment in Southern Lake Michigan

Slag is a ubiquitous byproduct of the iron-smelting industry and influences geochemistry and water quality in adjacent geologic units, ground and surface water. Despite extensive slag deposition along the Indiana shoreline of Lake Michigan, definitive evidence that slag has affected lakebed sediments has not been established. Concerns for the protection of water and ecosystem resources in the Great Lakes motivated this study to determine if strontium and boron isotopes could be used to identify and delineate slag-affected bed sediment in Lake Michigan. Sixty-five samples of bed sediment were acquired from the southern lobe of Lake Michigan and analyzed for 87Sr/86Sr and ??11B. Samples immediately offshore from Indiana steel mills and slag-disposal sites contained higher median 87Sr/86Sr values (0.70881) than shoreline sediments collected elsewhere in the basin (0.70847) and uniquely decreased with increasing distance from the shoreline. The highest ??11B values occurred in sediments from the Indiana shoreline (+12.9 to 16.4???) but were also elevated in sediments collected offshore from three Lake Michigan cities (+11.7 to 12.7???). Contoured isotope data indicated that 82-154 km2 of bed sediment along the Indiana shoreline had elevated 87Sr/86Sr and ??11B values relative to shoreline sediments elsewhere in southern Lake Michigan.

Environmental Science & Technology↗

USGS1998

Accounting for cyanide and its degradation products at three Nevada gold mines; constraints from stable C- and N-isotopes

An understanding of the fate of cyanide (CN-) in mine process waters is important for addressing environmental concerns and for taking steps to minimize reagent costs. The utility of stable isotope methods in identifying cyanide loss pathways has been investigated in case studies at three Nevada gold mines. Freshly prepared barren solutions at the mines have cyanide d15N and d13C values averaging -4 ? and -36 ?, respectively, reflecting the nitrogen and carbon sources used by commercial manufacturers, air and natural gas methane. Pregnant solutions returning from ore heaps display small isotopic shifts to lower d15N and d13C values. The shifts are similar to those observed in laboratory experiments where cyanide was progressively precipitated as a cyanometallic compound, and are opposite in sign and much smaller in magnitude than the shifts observed in experiments where HCN was offgassed. Offgassing is inferred to be a minor cyanide loss mechanism in the heap leach operations at the three mines, and precipitation as cyanometallic compounds, and possibly coprecipitation with ferric oxides, is inferred to be an important loss mechanism. Isotopic analysis of dissolved inorganic carbon (DIC) shows that uptake of high d13C air CO2 has been important in many barren and pregnant solutions. However, DIC in reclaim pond waters at all three mines has low d13C values of -28 to -34 ? indicating cyanide breakdown either by hydrolysis or by other chemical pathways that break the C-N bond. Isotope mass balance calculations indicate that about 40 % of the DIC load in the ponds, at a minimum, was derived from cyanide breakdown. This level of cyanide hydrolysis accounts for 14-100 % of the dissolved inorganic nitrogen species present in the ponds. Overall, isotope data provide quantitative evidence that only minor amounts of cyanide are lost via offgassing and that significant amounts are destroyed via hydrolysis and related pathways. The data also highlight the possibility that significant cyanide may be either retained in the ore heaps or destroyed via other chemical pathways.

Open-File Report↗

USGS1996

Covalent binding of aniline to humic substances. 2. 15N NMR studies of nucleophilic addition reactions

Aromatic amines are known to undergo covalent binding with humic substances in the environment. Although previous studies have examined reaction conditions and proposed mechanisms, there has been no direct spectroscopic evidence for the covalent binding of the amines to the functional groups in humic substances. In order to further elucidate the reaction mechanisms, the Suwannee River and IHSS soil fulvic and humic acids were reacted with 15N-labeled aniline at pH 6 and analyzed using 15N NMR spectrometry. Aniline underwent nucleophilic addition reactions with the quinone and other carbonyl groups in the samples and became incorporated in the form of anilinohydroquinone, anilinoquinone, anilide, imine, and heterocyclic nitrogen, the latter comprising 50% or more of the bound amine. The anilide and anilinohydroquinone nitrogens were determined to be susceptible to chemical exchange by ammonia. In the case of Suwannee River fulvic acid, reaction under anoxic conditions and pretreatment with sodium borohydride or hydroxylamine prior to reaction under oxic conditions resulted in a decrease in the proportion of anilinohydroquinone nitrogen incorporated. The relative decrease in the incorporation of anilinohydroquinone nitrogen with respect to anilinoquinone nitrogen under anoxic conditions suggested that inter- or intramolecular redox reactions accompanied the nucleophilic addition reactions.

Environmental Science & Technology↗

USGS2002

Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental contaminants and their effects on fish in the Mississippi River Basin

We collected, examined, and analyzed 1378 fish of 22 species from 47 sites in the Mississippi River basin (MRB) during 1995 and from a reference site in 1996. The sampling sites in the MRB represented National Contaminant Biomonitoring Program (NCBP) stations situated at key points on major rivers and National Water- Quality Assessment Program (NAWQA) stations located on lower-order rivers and streams in the Eastern Iowa Basins (EIB) and Mississippi Embayment (MSE) Study Units. The reference site was the water supply system of the USGS-Leetown Science Center in rural Jefferson County, WV. Common carp (Cyprinus carpio; carp) and black basses (Micropterus spp.; bass), the targeted species, together represented 82% of the fish collected. Each fish was examined in the field for externally and internally visible gross lesions, selected organs were weighed to compute various ponderal and organo-somatic indices, and selected tissues and fluids were obtained and preserved for analysis of biomarkers. Fish health indicators included splenic macrophage aggregates, lysozyme activity, and hispathological analysis of liver, kidney, and other tissues. Reproductive biomarkers included analysis of plasma concentrations of vitellogenin (vtg) and the sex steroid hormones 17-estradiol (E2) and 11-ketotestosterone (11- kt); and the histological determination of percent oocyte atresia (in female fish) and gonadal stage. Hepatic ethoxyresorufin O-deethylase (EROD) activity was also measured. Composite samples of whole fish from each station were grouped by species and gender and analyzed for persistent organochlorine and elemental contaminants and for dioxin-like activity (TCDD-EQ) using the H4IIE rat hepatoma cell bioassay. Organochlorine and inorganic contaminant concentrations in fish were generally low relative to historical levels at most sites, but remained present at concentrations representing threats to piscivorous wildlife in some locations. Toxaphene and DDT (mostly as p,p?-DDE) concentrations remained elevated in fish from the cottongrowing regions of the lower Mississippi valley, and were generally greater in the smaller streams draining agricultural areas (that is, in the MSE Study Unit) than at large river sites. Cyclodiene pesticide concentrations were also greatest in the EIB Study Unit and elsewhere in the corn-growing regions of the mid-MRB. Former point-sources of organochlorine pesticides also remained evident, especially in the Mississippi River near Memphis, TN. Consistent with previous findings, total PCB concentrations tended to be greatest (1-3 g/g) in the industrialized and urbanized Ohio River and Upper Mississippi sub-basins and at Memphis, TN, and were generally correlated with TCDD-EQ and EROD activity. Conversely, PCB concentrations were low (<0.1 g/g) in the more agricultural parts of the MRB. Concentrations of inorganic contaminants were also relatively low and stable or declining relative to past levels at most sites. Exceptions were Hg and Se; Hg concentrations were slightly elevated (>0.3 g/g) in bass from the Mississippi River at Memphis and several other sites and in carp from one MSE site. Concentrations of Se were also great enough to constitute a hazard to piscivorous wildlife (>0.6 g/g) at several MRB sites in the western parts of the MRB and were especially high (4-5 g/g) in fish from John Martin Reservoir, CO, where elevated concentrations were reported previously. Biomarker results indicated that fish from many stations had been exposed to contaminants, but at no sites did findings indicate exposure to high concentrations of toxic chemicals. Noteworthy among biomarker findings was that 73% of the male smallmouth bass (Micropterus dolomieui) from the Mississippi River at Lake City, MN (Lake Pepin) were intersex as indicated by the histological detection of ovotestes; and the combined EROD and H4IIE results indicated that fish from several rural sites in the

Mississippi River basin↗

USGS2019

Benthos and plankton of western Lake Michigan Areas of Concern in comparison to non-Areas of Concern for selected rivers and harbors, 2012 and 2014

Since their designation in the 1980s, Areas of Concern (AOCs) around the Great Lakes have been the focus of multi-State and international cleanup efforts that were needed after decades of human activity resulted in severely contaminated sediment, water-quality degradation, loss of habitat for aquatic organisms, and impaired public use. Although individual Great Lake States had been working to cleanup and mitigate environmental concerns, there was insufficient funding and little coordination between Federal and State efforts to address the large and complex set of problems. The Great Lakes Ecosystem Protection Act was passed in 2010, providing for comprehensive multi-State planning and dedicating Federal funds to accelerate cleanup and improve conditions at the AOCs with a particular focus on 14 beneficial use impairments, such as degradation of benthos and degradation of phytoplankton and zooplankton populations. Of Wisconsin’s five AOCs, four lie adjacent to Lake Michigan: Lower Menominee River, Lower Green Bay and Fox River, Sheboygan River, and Milwaukee Estuary (which includes the Milwaukee River, Menomonee River, Kinnickinnic River, and Milwaukee Harbor). The Wisconsin Department of Natural Resources has focused much of the cleanup on removal of contaminated sediment from these AOCs because many beneficial use impairments were a result of contaminated sediment. However, recent and quantitative assessments of the status of benthos and plankton at the AOCs were lacking. Therefore, to inform management decisions regarding the status of benthos and plankton at AOCs, the U.S. Geological Survey, in cooperation with the Wisconsin Department of Natural Resources (WDNR) and the U.S. Environmental Protection Agency, Great Lakes National Program Office, assessed the condition of benthos (benthic invertebrates) and plankton (zooplankton and phytoplankton) at sites in the 4 AOCs and at 6 less-degraded comparison sites (hereafter referred to as “non-AOCs”). The U.S. Geological Survey collected benthos, plankton, sediment, and water three times per year in 2012 and 2014 between May and August at the AOC and non-AOC comparison sites. Except for Lower Green Bay and Milwaukee Harbor, each AOC site or subsite was paired with sites in two non-AOCs with similar environmental conditions. Community-based metrics were compared using univariate and multivariate statistics between each AOC and the mean of all non-AOCs and between each AOC and the mean of two non-AOC comparison sites. Although it was assumed that, because of their designation as AOCs, the relationships would indicate degraded conditions compared to the non-AOC sites, several metrics for the AOCs did not significantly differ between the AOCs and non-AOCs in 2014. Of all four AOCs examined for benthos, only the Lower Menominee River AOC differed from its two non-AOC comparison sites; the density and richness of taxa in insect orders Ephemeroptera-Plecoptera-Trichoptera (mayflies, stoneflies, and caddisflies) in combined benthos (dredge and artificial substrate samples) were lower at the AOC. For plankton, the assemblages for zooplankton at the Fox River near Allouez (a subsite in the Lower Green Bay AOC) and the Milwaukee River differed from their two non-AOC comparison sites; density of zooplankton was lower at both AOCs. Metrics for combined benthos and combined phytoplankton (soft algae and diatoms) at the Sheboygan River AOC did not differ from the two non-AOC comparison sites; however, the diversity of zooplankton in 2014 was lower at the Sheboygan River AOC than at the two non-AOC comparison sites. The combination of univariate and multivariate statistics provided a way to evaluate the status of the aquatic assemblage at each AOC and whether or not the assemblage differed from less-degraded non-AOC comparison sites. Results for this study provide multiple lines of evidence for evaluating the status of aquatic communities at AOC sites in Wisconsin along the western Lake Michigan shoreline in 2012 and 2014.

Wisconsin↗

USGS2004

Predicting maternal body burdens of organochlorine pesticides from eggs and evidence of maternal transfer in Alligator mississippiensis

Few data exist regarding maternal-embryonal transfer of organochlorine pesticides (OCPs) in reptiles. The objective of the present study was to evaluate maternal transfer of OCPs in American alligators (Alligator mississippiensis) from low-, intermediate-, and high-OCP-exposure sites. Overall, total OCP burdens ranged from less than 0.8 ppb in blood to more than 44,000 ppb in abdominal adipose tissue (wet wt concentrations). Lipid-adjusted ratios of maternal adipose burdens (total OCPs) to yolk burdens were close to one (0.94 ?? 0.31:1), suggesting that animals were in steady state and that OCPs in eggs originated from adipose lipids. In contrast, lipid-adjusted muscle and liver OCP burdens were greater than yolk OCP burdens, suggesting that lipids in muscle were not utilized during oogenesis and that nonlipid liver tissue sequesters OCPs. Predictive equations were derived for several tissues and several OCP analytes with r2 values ranging from 0.40 to 0.99 (p < 0.05). We suggest that yolk burdens are predictive of maternal tissue burdens for certain tissues and OCPs and that certain OCPs are maternally transferred in the American alligator. Furthermore, we suggest that future studies should investigate the applicability of these predictive equations for assessing maternal exposure in other crocodilian species.

Environmental Toxicology and Chemistry↗

USGS2024

Homogenization of soil seed bank communities by fire and invasive species in the Mojave Desert

Soil seed banks help maintain species diversity through temporal storage effects and function as germination pools that can optimize fitness across varying environmental conditions. These characteristics promote the persistence of native plant communities, yet disturbances such as fire and associated invasions by non-native species can disrupt these reserves, fundamentally altering successional trajectories. This may be particularly true in deserts, where native plant communities are less adapted to fire. While studies of fire effects on desert plant communities are not uncommon, information regarding the short- and long-term effects of fire on seed banks is less available. To better understand the influence of fire and invasive species on desert seed banks, we investigated soil seed bank biodiversity from 30 wildfires that burned between 1972 and 2010 across the Mojave Desert ecoregion of North America. We assessed how characteristics of fire regimes (frequency, time since fire, and burn severity) interacted with climate and invasive plants on measures of α-, β-, and γ-diversities. Because β-diversity is a direct measure of community variability and reveals important information about biodiversity loss, we further examined the nestedness and turnover components of β-diversity. Mean α- and γ-diversities were generally higher for burned locations than in unburned reference sites, however individual fire variables had little influence on patterns of seed bank diversity. Burned area seed banks tended to be dominated by non-native invasive species, primarily two grasses, ( Bromus rubens , Bromus tectorum ), as well as an invasive forb ( Erodium cicutarium ). The most striking pattern we observed was a collective sharp decline in α-, β-, and γ-diversities with increased invasive species dominance, indicating the homogenization of seed bank communities with the colonization of invasive species after fire. Evidence of homogenization was further supported by reduced turnover and increased nestedness in burn areas compared to reference areas indicating potential biodiversity loss. Our findings highlight how biological processes such as plant invasions can combine with disturbance from fire to alter patterns of seed bank composition and diversity in desert ecosystems.

Frontiers in Ecology and Evolution↗

USGS2011

Adaptive management for a turbulent future

The challenges that face humanity today differ from the past because as the scale of human influence has increased, our biggest challenges have become global in nature, and formerly local problems that could be addressed by shifting populations or switching resources, now aggregate (i.e., "scale up") limiting potential management options. Adaptive management is an approach to natural resource management that emphasizes learning through management based on the philosophy that knowledge is incomplete and much of what we think we know is actually wrong. Adaptive management has explicit structure, including careful elucidation of goals, identification of alternative management objectives and hypotheses of causation, and procedures for the collection of data followed by evaluation and reiteration. It is evident that adaptive management has matured, but it has also reached a crossroads. Practitioners and scientists have developed adaptive management and structured decision making techniques, and mathematicians have developed methods to reduce the uncertainties encountered in resource management, yet there continues to be misapplication of the method and misunderstanding of its purpose. Ironically, the confusion over the term "adaptive management" may stem from the flexibility inherent in the approach, which has resulted in multiple interpretations of "adaptive management" that fall along a continuum of complexity and a priori design. Adaptive management is not a panacea for the navigation of 'wicked problems' as it does not produce easy answers, and is only appropriate in a subset of natural resource management problems where both uncertainty and controllability are high. Nonetheless, the conceptual underpinnings of adaptive management are simple; there will always be inherent uncertainty and unpredictability in the dynamics and behavior of complex social-ecological systems, but management decisions must still be made, and whenever possible, we should incorporate learning into management. ?? 2010 .

Journal of Environmental Management↗

USGS2012

Assessing ongoing sources of dissolved-phase polychlorinated biphenyls in a contaminated stream

Few studies assess the potential of ongoing sources of “fresh” polychlorinated biphenyls (PCBs) to aquatic systems when direct discharge to the environment has been eliminated. In the present study, the authors used single-layered, low-density polyethylene samplers (PEs) to measure total PCB concentrations, congener profiles, and enantiomeric fractions (EFs) in a contaminated stream and to provide multiple lines of evidence for assessing ongoing inputs of PCB. Concentrations were well above background levels that have been monitored for years. Concentrations significantly increased with distance, the farthest downstream PE concentrations being almost five times greater than those at 79 m downstream of a historical point source. The PCBs in the PEs at 79 m downstream of the contamination source were dominated by low K OW congeners, similar to those in the mixture of Aroclors 1016 and 1254 (4:1 v/v) historically released from the former capacitor manufacturer. The only two chiral congeners detected in the PEs downstream were PCBs 91 and 95. The EF values were nonracemic for PCB 91, while the values were either racemic or near racemic for PCB 95. Increased PCB concentrations with distance and a congener composition of predominantly low-weight congeners in the PEs at 79 m downstream of the plant site suggested an ongoing PCB source from the plant site. Chiral signatures suggested aerobic biotransformation of dissolved PCBs but did not shed any light on possible ongoing PCB inputs.

Environmental Toxicology and Chemistry↗

USGS2006

Evidence of regional subsidence and associated interior wetland loss induced by hydrocarbon production, Gulf Coast region, USA

Analysis of remote images, elevation surveys, stratigraphic cross-sections, and hydrocarbon production data demonstrates that extensive areas of wetland loss in the northern Gulf Coast region of the United States were associated with large-volume fluid production from mature petroleum fields. Interior wetland losses at many sites in coastal Louisiana and Texas are attributed largely to accelerated land subsidence and fault reactivation induced by decreased reservoir pressures as a result of rapid or prolonged extraction of gas, oil, and associated brines. Evidence that moderately-deep hydrocarbon production has induced land-surface subsidence and reactivated faults that intersect the surface include: (1) close temporal and spatial correlation of fluid production with surficial changes including rapid subsidence of wetland sediments near producing fields, (2) measurable offsets of shallow strata across the zones of wetland loss, (3) large reductions in subsurface pressures where subsidence rates are high, (4) coincidence of orientation and direction of displacement between surface fault traces and faults that bound the reservoirs, and (5) accelerated subsidence rates near producing fields compared to subsidence rates in surrounding areas or compared to geological rates of subsidence. Based on historical trends, subsidence rates in the Gulf Coast region near producing fields most likely will decrease in the future because most petroleum fields are nearly depleted. Alternatively, continued extraction of conventional energy resources as well as potential production of alternative energy resources (geopressured-geothermal fluids) in the Gulf Coast region could increase subsidence and land losses and also contribute to inundation of areas of higher elevation. ?? Springer-Verlag 2006.

Environmental Geology↗

USGS2024

Causal inference approaches reveal both positive and negative unintended effects of agricultural and urban management practices on instream biological condition

Agricultural and urban management practices (MPs) are primarily designed and implemented to reduce nutrient and sediment concentrations in streams. However, there is growing interest in determining if MPs produce any unintended positive effects, or co-benefits, to instream biological and habitat conditions. Identifying co-benefits is challenging though because of confounding variables (i.e., those that affect both where MPs are applied and stream biota), which can be accounted for in novel causal inference approaches. Here, we used two causal inference approaches, propensity score matching (PSM) and Bayesian network learning (BNL), to identify potential MP co-benefits in the Chesapeake Bay watershed portion of Maryland, USA. Specifically, we examined how MPs may modify instream conditions that impact fish and macroinvertebrate indices of biotic integrity (IBI) and functional and taxonomic endpoints. We found evidence of positive unintended effects of MPs for both benthic macroinvertebrates and fish indicated by higher IBI scores and specific endpoints like the number of scraper macroinvertebrate taxa and lithophilic spawning fish taxa in a subset of regions. However, our results also suggest MPs have negative unintended effects, especially on sensitive benthic macroinvertebrate taxa and key instream habitat and water quality metrics like specific conductivity. Overall, our results suggest MPs offer co-benefits in some regions and catchments with largely degraded conditions but can have negative unintended effects in some regions, especially in catchments with good biological conditions. We suggest the number and types of MPs drove these mixed results and highlight carefully designed MP implementation that incorporates instream biological data at the catchment scale could facilitate co-benefits to instream biological conditions. Our study underscores the need for more research on identifying effects of individual MP types on instream biological and habitat conditions.

Maryland↗

USGS2018

Monitoring the water-quality response of agricultural conservation practices in the Bucks Branch watershed, Sussex County, Delaware, 2014–16

The purpose of this study was to evaluate the effects of irrigation and cover crops as conservation practices on water quality in groundwater and streams. Bucks Branch, a stream in the Nanticoke River watershed in southwestern Delaware, was identified as having one of the highest concentrations of nitrate in all surface-water sites sampled by the Delaware Department of Natural Resources and Environmental Control (DNREC). The study site is on two adjacent fields bordering Bucks Branch, one that has used irrigation since 2000 and one with dryland farming; both under conservation tillage and long-term rotation of corn, soybean, and small grain crops. A streamgage was installed near the study site fields to measure streamflow and water quality. The study area is typical of farming practices and environmental conditions throughout much of the intensively farmed agricultural land of the Coastal Plain of Delaware and surrounding parts of Maryland. Monitoring was conducted from January 2014 through June 2016. Corn was grown on both fields during the two growing seasons of the study period, and cover crops were planted before or shortly after harvest on both fields. During the second year of data collection, the effects of radish and rye grass cover crops on nutrient transport were studied. The combined results from data collected for this study show that water and nitrate moved below the root zone year round when soil moisture was high, especially after significant rainfall and frequently after irrigation. Soil water sampled 2 to 3 weeks after nutrients were applied had nitrate concentrations greater than 50 milligrams per liter as nitrogen (mg/L as N) and may be a significant source of nitrate to groundwater. Whereas recharge containing elevated nitrate concentrations also occurred under the dryland field, it was less frequent and of lower concentration than recharge under the irrigated field. Nitrate was present in all groundwater samples from these sites. Groundwater estimated to have recharged within 10 years or less had higher median concentrations of nitrate than in older water samples. The oldest groundwater encountered was over 30 years old, and had traveled along the longest, deep flowpaths from upland fields to the stream. The median nitrate concentration was 18 mg/L as N in younger water (less than 10 years old) beneath the irrigated field, compared to about 10 mg/L as N in younger water beneath the dryland field. Samples from the shallow upland wells in both study fields showed little, if any, evidence of denitrification. Several samples from deeper wells and from wells near forested riparian zone wetlands that border both fields did show partial denitrification. A mixing model estimated that between 12 and 22 percent of the nitrate discharging to the stream was lost through uptake and denitrification upstream of the streamgage on Bucks Branch. Continuous data collected at this site and evidence of denitrification in the surface-water samples showed a greater potential for loss of nitrate during the warmer months than the colder months. This pattern was similar to that seen below the streamgage at the most downstream site in the watershed. A mixed cover crop of radishes and rye was planted prior to removal (radishes) and just after harvest (rye) of the corn crop on the irrigated field. Rye grass was planted shortly after crop harvest on the dryland field. Cover crop biomass samples collected while radishes were growing and after they were killed by freezing temperatures indicates that the early planted radish crop effectively scavenged available nitrogen from the soil. Whereas radish biomass initially held more nitrogen than rye, at 55 to 8 pounds per acre, respectively, leaching of inorganic nitrate following radish die-off was minimal. Soil-water nitrate concentrations during the cover-crop growing period were lower than during the growing season prior to planting of the cover crop. There also was an increase in soil fertility and dissolved organic nitrate in samples of soil water that was likely related to increased soil microbial metabolism. Results indicate that cover crops stored plant nutrients over the winter and did not increase shallow groundwater concentrations of nitrate. Although conservation practices such as cover crops and nutrient management have been applied to these fields, there was still significant leaching of nitrate to groundwater, especially under the irrigated field. This will likely continue to be a challenge in this area and other parts of the Coastal Plain where soil moisture capacity is relatively low and managing irrigation around rainfall is difficult. Cover crops, when planted in standing corn, are one practice that can effectively pull nitrate from below the root zone to the top layer of soil, thus limiting the amount of potential nitrate leaching to groundwater. Irrigation management that would lower average soil moisture conditions during the growing season also could potentially limit nitrogen transport.

Delaware↗

USGS2022

Using microbial source tracking to identify contamination sources in Port Jefferson Harbor, Setauket Harbor, and Conscience Bay on Long Island, New York

The U.S. Geological Survey worked in cooperation with the New York State Department of Environmental Conservation to assess the potential sources of fecal contamination entering Port Jefferson Harbor, Setauket Harbor, and Conscience Bay, an embayment complex on the northern shore of Suffolk County, Long Island, New York. Water samples are routinely collected by the New York State Department of Environmental Conservation in the harbor and analyzed for fecal coliform bacteria, an indicator of fecal contamination, to determine the need for closure of shellfish beds for harvest and consumption. Fecal coliform and other bacteria are an indicator of the potential presence of pathogenic (disease-causing) bacteria. However, indicator bacteria alone cannot determine the biological or geographical sources of contamination; therefore, microbial source tracking was implemented to determine various biological sources of contamination. In addition, information such as the location, weather and season, and surrounding land use where a sample was collected help determine the geographical source and conveyance of land-based water to the embayment. Our analysis revealed that the most substantial source of fecal contamination to the Port Jefferson Harbor complex was discharge from sites draining ponds and wetlands, particularly during the summer months. Fecal coliform bacteria at sites where ponds and wetlands drain are increased by stormwater runoff, which is another substantial source of fecal contamination. Human markers, likely originating from the outfall of the Port Jefferson sewage treatment plant, were found at least once in every sample collected within Port Jefferson Harbor; however, fecal coliform concentrations were low, indicating that the sewage treatment plant is not a likely source of fecal contamination to the embayment. Canine markers detected in Conscience Bay were associated with high fecal coliform, particularly in wet summer samples. Waterfowl markers were most often detected in source water for Port Jefferson Harbor, but in Conscience Bay, waterfowl was frequently detected within the bay itself. Resuspension of bed sediment may contribute to fecal contamination in the harbor, but more targeted analyses are needed to support this finding. There was little evidence of groundwater-contributing fecal bacteria by direct discharge from the subsurface. A classification scheme was developed to convey the degree of fecal contamination to stakeholders and resource managers. Based on this classification scheme, the Culvert North of State Route 25A, Culvert North of Shore Road, Old Mill Creek Culvert, and Mill Pond Culvert to Conscience Bay sites were identified as locations that contribute substantial fecal contamination to the Port Jefferson Harbor complex.

New York↗

USGS1996

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Vermejo Project area and the Maxwell National Wildlife Refuge, Colfax County, northeastern New Mexico, 1993

Based on findings of limited studies during 1989-92, a reconnaissance investigation was conducted in 1993 to assess the effects of the Vermejo Irrigation Project on water quality in the area of the project, including the Maxwell National Wildlife Refuge. This project was part of a U.S. Department of the Interior National Irrigation Water-Quality Program to determine whether irrigation drainage has caused or has the potential to cause significant harmful effects on human health, fish, and wildlife and whether irrigation drainage may adversely affect the suitability of water for other beneficial uses. For this study, samples of water, sediment, and biota were collected from 16 sites in and around the Vermejo Irrigation Project prior to, during the latter part of, and after the 1993 irrigation season (April, August-September, and November, respectively). No inorganic constituents exceeded U.S. Environmental Protection Agency drinking-water standards. The State of New Mexico standard of 750 micrograms per liter for boron in irrigation water was exceeded at three sites (five samples), though none exceeded the livestock water standard of 5,000 micrograms per liter. Selenium concentrations exceeded the State of New Mexico chronic standard of 2 micrograms per liter for wildlife and fisheries water in at least eight samples from five sites. Bottom-sediment samples were collected and analyzed for trace elements and compared to concentrations of trace elements in soils of the Western United States. Concentrations of three trace elements at eight sites exceeded the upper values of the expected 95-percent ranges for Western U.S. soils. These included molybdenum at one site, selenium at seven sites, and uranium at four sites. Cadmium and copper concentrations exceeded the National Contaminant Biomonitoring Program 85th percentile in fish from six sites. Average concentrations of selenium in adult brine flies (33.7 μ g/g dry weight) were elevated above concentrations in other invertebrates. Concentrations of other elements were below their respective toxicity levels. Plants, invertebrates, fish, and fish fillets were collected and analyzed. These analyses were compared to diagnostic criteria and to each other to determine the extent of bioaccumulation of trace elements. Plants contained larger dry weight concentrations of aluminum, arsenic, boron, chromium, iron, lead, magnesium, manganese, nickel, and vanadium than invertebrates and fish. Adult brine flies, gathered from playas, contained larger geometric mean dry weight concentrations of boron, magnesium, and selenium than other invertebrates. Of all samples collected, the largest mercury concentrations were found in fish fillets, although these concentrations were below levels of concern. Mercury and selenium bioaccumulation was evident in various habitats of the study area. Biological samples from Natural playa, an endemic wetland, and Half playa, a playa that receives additional water through seepage and irrigation delivery canals, generally had elevated concentrations of boron, iron, magnesium, and selenium than samples from reservoir and river sites. Selenium concentrations were lowest in biota from the two reservoir sites, although a wetland immediately downstream from the dam impounding Lake No. 13 (created by seepage from the reservoir) had elevated concentrations of selenium in biota. The geometric mean selenium concentration of whole-fish samples, except those from Lakes No. 13 and No. 14, exceeded the 5- μ g/g dry weight selenium concentration that demarcates the approximate lower limit of the threshold range of concentrations that have freen associated with adverse effects on piscine reproduction. Biota collected on and in the area around Maxwell National Wildlife Refuge contained concentrations of selenium that are in the lower range of threshold values that have been associated (dietarily) with risks of avian reproductive abnormalities. Bottom-sediment samples from two sites downstream from the irrigation project were collected and analyzed for 23 organic compounds (principally organochlorine pesticide residues). Three compounds were detected at the two sites: DDD was found at 0.2 microgram per kilogram, DDE was detected at 0.1 microgram per kilogram at both sites, and chlordane was detected at 1 microgram per kilogram. None of the 28 whole-fish and fillet samples analyzed for PCB and organochlorine pesticide residues contained any of the 23 organic compounds tested for at concentrations higher than the analytical reporting limit (less than 0.01 μ g/g wet weight). Concentrations of inorganic analytes were generally within established guidelines or expected concentrations for water, sediment, and biota. lirigation-return flows were found to be unrelated to adverse effects in biota.

New Mexico↗

USGS1999

Liquefaction evidence for at least two strong Holocene paleo-earthquakes in central and southwestern Illinois, USA

Two strong mid-Holocene earthquakes in Illinois have been documented by paleoliquefaction features such as clastic dikes, sills, and detachments of fine-grained sediment that sunk into liquefied sand. At least one paleo-earthquake occurred in central Illinois about 35 km NE of Springfield, probably sometime between 5,900 and 7,400 yr BP. Dike widths are as much as 0.4 m near the energy center of the earthquake. Outward from this center, dike widths attenuate and ultimately disappear at about 35 km. More than one paleo-earthquake is probably represented by liquefaction features near Springfield. Another paleo-earthquake that appears to have been centered about 65 km ESE of St. Louis, Missouri, occurred near 5,700 yr BP. The energy center is inferred as being in Illinois, and most likely near lowermost Shoal Creek where the meizoseismal region is defined by dikes as wide as 0.5 m and by a regional abundance of dikes. Dikes from this earthquake probably extend at least as far as 35 km from its inferred energy center. The earthquake near Shoal Creek and one earthquake near Springfield almost certainly exceeded M 6. The paleomagnitudes can be more closely bracketed by geotechnical testing and analysis, when used in conjunction with existing data.

Illinois↗

USGS2021

Enhanced susceptibility of methylmercury bioaccumulation into seston of the Laurentian Great Lakes

Mercury concentrations in the Laurentian Great Lakes waters are among the lowest reported in the literature, while game fish concentrations approach consumption advisory limits, particularly in Lakes Superior, Huron, and Michigan, indicating efficient methylmercury transfer from water to game fish. To determine if increased transfer efficiency is evident within the lower food web, we measured (2010–2018) mercury and dissolved organic carbon (DOC) in water, and in size-sieved seston, dietary tracers (carbon and nitrogen isotope ratios), phytoplankton methylmercury bioaccumulation, and methylmercury biomagnification between increasing seston size fractions. We observed consistently low filter-passing methylmercury (<0.010 ng L –1 ) and comparatively variable DOC (1.1 to 3.4 mg L –1 ) concentrations. Methylmercury biomagnification factors between size-sieved seston were similar between lakes. Bioaccumulation factors in phytoplankton were among the highest in the literature (log 5.5 to 6.1), exceeding those in oceans, smaller lakes, and streams, and was influenced by DOC. Higher bioaccumulation rates increase the susceptibility of methylmercury accumulation into the food web. Because mercury is dominantly delivered to the Great Lakes through the atmosphere and the biota therein is highly susceptible to methylmercury uptake, we propose that the Laurentian Great Lakes are excellent sentinels to trace the success of efforts to decrease global mercury emissions (e.g., Minamata Treaty) in the future.

Environmental Science and Technology↗