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Genetic variation in black bears in Arkansas and Louisiana using microsatellite DNA markers

In the 1950s and 1960s, translocation projects reintroduced black bears ( Ursus americanus ) from Minnesota and Manitoba to Arkansas and Louisiana. Today, several geographically disconnected populations exist in Arkansas and Louisiana, but their origins are unclear. Some populations may represent a separate subspecies, U. a. luteolus , which is federally protected. We characterized 5 microsatellite loci in 5 isolated populations in Arkansas and Louisiana and compared them with genotypes from Minnesota. Our data indicate that bears of the Ozark and Ouachita mountains of Arkansas, an inland area of Louisiana, and those of Minnesota are similar in overall genetic diversity and allele frequencies, consistent with these populations being wholly or mostly descended from bears from the reintroduction programs. In contrast, bears from southeastern Arkansas and the coastal region of Louisiana genetically are more restricted and homogeneous. Because they exhibit a limited set of genotypes found in the other black bear populations, they represent isolated fragments of a single North American black bear population. Furthermore, genetic distance estimates indicate that the bears in southeastern Arkansas are more genetically distinct from bears in Louisiana, which are currently federally protected.

Arkansas, Louisiana

Population genetic structure of a widespread coniferous tree, Taxodium distichum [L.] Rich. (Cupressaceae), in the Mississippi River Alluvial Valley and Florida

Studies of genetic variation can elucidate the structure of present and past populations as well as the genetic basis of the phenotypic variability of species. Taxodium distichum is a coniferous tree dominant in lowland river flood plains and swamps of the southeastern USA which exhibits morphological variability and adaption to stressful habitats. This study provides a survey of the Mississippi River Alluvial Valley (MAV) and Florida to elucidate their population structure and the extent of genetic differentiation between the two regions and sympatric varieties, including bald cypress (var. distichum ) and pond cypress (var. imbricatum ). We determined the genotypes of 12 simple sequence repeat loci totaling 444 adult individuals from 18 natural populations. Bayesian clustering analysis revealed high levels of differentiation between the MAV and the Florida regions. Within the MAV region, there was a significant correlation between genetic and geographical distances. In addition, we found that there was almost no genetic differentiation between the varieties. Most genetic variation was found within individuals (76.73 %), 1.67 % among individuals within population, 15.36 % among populations within the regions, and 9.23 % between regions within the variety. Our results suggest that (1) the populations of the MAV and the Florida regions are divided into two major genetic groups, which might originate from different glacial refugia, and (2) the patterns of genetic differentiation and phenotypic differentiation were not parallel in this species.

Florida;Georgia;Louisiana;Mississippi;Alabama;Arka

Geochemical, modal, and geochronologic data for 1.4 Ga A-type granitoid intrusions of the conterminous United States

Introduction The purpose of this report is to present available geochemical, modal, and geochronologic data for approximately 1.4 billion year (Ga) A-type granitoid intrusions of the United States and to make those data available to ongoing petrogenetic investigations of these rocks. A-type granites, as originally defined by Loiselle and Wones (1979), are iron-enriched granitoids (synonymous with the ferroan granitoids of Frost and Frost, 2011) that occur in an anorogenic, within-continent setting. Relative to other granitic rocks, A-type granites have high FeO*/(FeO*+MgO), high K 2 O and K 2 O/Na 2 O, are metaluminous to weakly peraluminous, and are enriched in incompatible trace elements. Loiselle and Wones (1979) further suggested that A-type granites are relatively anhydrous. Anderson (1983) provides an early compilation of data for the products of 1.4 Ga magmatism in North America and notes the spatial and temporal association of a trio of rock types, which includes gabbro to anorthosite, intermediate composition mangerite, and granitic rapakivi rocks. In North America, the majority of known A-type intrusions were emplaced between 1.5 and 1.3 Ga and are predominantly of the granitic variety (Anderson, 1983). This report addresses the broadly Mesoproterozoic-age granitic rocks of the conterminous United States. Constituents of this group of intrusive rocks were defined using a variety of spatial, compositional, and geochronologic metrics. Thomas and others (2012) provided an updated synthesis, largely based on new isotopic and geochronologic data (for example, Fisher and others, 2010), for the large-scale geologic and tectonic evolution of the eastern United States. Their findings suggest that the basement rocks of the central and southern Appalachian region are allochthonous relative to the remainder of Laurentia and were accreted along the Grenville front between 1.25 and 1.0 Ga. Accordingly, Mesoproterozoic rocks east of the Grenville front and south of the approximate latitude of New York City do not represent North American magmatism. Consequently, geochemical, modal, and geochronologic data for these rocks are not included in the compilation described herein. Further, the structural styles and compositions of granitoid rocks east of the Grenville front, mostly highly deformed gneissic rocks, are dissimilar to those characteristic of the A-type granitoid rocks described herein. A variety of compositional and age information further characterizes the 1.4 Ga A-type granitoid rocks in the conterminous United States. Most samples included in this compilation have felsic compositions, although some extend to intermediate compositions. SiO2 contents range from 56 to almost 78 weight percent, and median and mean SiO2 contents are 72.0 and 71.1 weight percent, respectively. The majority of these rocks for which modal data are available are composed of monzogranite (Streckeisen, 1976), although the dataset also contains many samples composed of granodiorite and syenogranite. A smaller group of the granitoid rocks in this dataset are composed of quartz monzodiorite and quartz monzonite, and a very small subset of samples is composed of alkali-feldspar granite, tonalite, alkali-feldspar quartz syenite, and quartz syenite (fig. 1). Many of the 1.4 Ga granitoid rocks are further characterized by medium- to coarse-grain size and are also conspicuously porphyritic; alkali feldspar phenocrysts or megacrysts (2–10 cm), often with rapakivi overgrowths, are a common feature of many of these rocks (Anderson, 1983; Anderson and Bender, 1989; Anderson and Cullers, 1978; Condie and Budding, 1979). The age of A-type magmatism in North America ranges from about 1.8 to 1.0 Ga, although Anderson (1983) suggests that more than 70 percent (by volume) of A-type magmatism in this region occurred between 1.49 and 1.41 Ga. In the conterminous United States, ages of A-type granitoid rocks are restricted to the period between about 1.49 and 1.33 Ga (Anderson, 1983; Bauer and Pollock, 1993; Bickford and Mose, 1975; Bickford, Harrower, and others, 1981; Bickford and others, 1989; Dewane and Van Schmus, 2007; Hoppe and others, 1983; Peterman and Hedge, 1968; Van Schmus and Bickford, 1981; Van Schmus and others, 1975). Using these recognition criteria, we identified A-type granitoid intrusions of the conterminous United States; for those intrusions, we compiled available geochemical, modal, isotopic (Sr and Nd) and geochronologic data for inclusion in the databases described herein. The significance of 1.4 Ga granitoid rocks relative to the geologic evolution of the conterminous United States remains unclear, despite Anderson’s (1983) compilation and synthesis of compositional data pertinent to these rocks. The large-volume magmatic events indicated by these rocks, as well as their broad geographic distribution, tectonic significance, and association with mineral deposits, underscore their importance. The broad distribution of these rocks, from the northern mid-continent to the southwestern United States (in New Mexico, Arizona, California, and southernmost Nevada), throughout the Rocky Mountains in New Mexico and Colorado (and sporadically in southern Wyoming and central Idaho), and beneath much of the Plains region (as indicated by drilling), has led to the large-scale tectonic and magmatic processes responsible for genesis of the associated magmas being actively studied. In addition, Kisvarsanyi (1972) suggests that iron-copper deposits in the St. Francois Mountains of southeastern Missouri are petrogenetically associated with 1.4 Ga A-type granitoids that occur in that region. Similarly, Dall’Agnol and others (2012) summarize important global associations between A-type granitoid rocks and a variety of important ore deposit types, particularly tin, high-field-strength elements (Zr, Hf, Nb, Ta), rare-earth elements, and iron oxide-copper-gold deposits. Consequently, the need to better understand relations between A-type granitoid rocks, tectonic setting, and magma petrogenesis, as well as their genetic associations with important types of ore deposits, suggests that developing a definitive geochemical, modal, and geochronologic database for these rocks in the conterminous United States is of considerable value.

Data Series

Madrean Archipelago Ecoregion: Chapter 28 in Status and trends of land change in the Western United States--1973 to 2000

The Madrean Archipelago Ecoregion (Omernik, 1987; U.S. Environmental Protection Agency, 1997), also known as the “Madrean Sky Islands” or “Sky Islands,” covers an area of approximately 40,536 km 2 (15,651 mi 2 ) in southeastern Arizona and southwestern New Mexico (fig. 1). The ecoregion is bounded on the west by the Sonoran Basin and Range Ecoregion, on the east by the Chihuahuan Deserts Ecoregion, and on the north by the Arizona/New Mexico Mountains Ecoregion. This area of basin-and-range topography is one of the most biologically diverse in the world (Koprowski, 2005; Skroch, 2008). Although the mountains in the ecoregion bridge the Rocky Mountains to the north and the Sierra Madre Occidental in Mexico to the south (U.S. Environmental Protection Agency, 1997), the lower elevations act as a barrier to species dispersal. Nevertheless, the geographic convergence of these two major continental mountain ranges, as well as of the Chihuahuan Desert to the east and the Sonoran Desert to the west, forms the foundation for ecological interactions found nowhere else on Earth (Skroch, 2008).

Arizona;New Mexico

Drain tiles and groundwater resources: Understanding the relations

Executive Summary Drainage for agricultural production over the past 150 years has been an integral component of human-driven change to Minnesota’s rural landscapes. Benefits of drainage Historically, poorly drained soils across much of the State would often remain saturated or flooded after spring snowmelt, preventing timely farm operations such as tilling and planting crops (Arneman, 1963). Installation of agricultural drainage, both surface ditches and subsurface drainage, accelerated transport of water off farm fields and imparted producers higher crop yields (Beauchamp, 1987; Stoner and others, 1993). Agricultural drainage offered many other benefits such as preventing crop drown out, aerating the soil profile for improved plant growth, limiting surface runoff and soil erosion, and allowing farmers better access to croplands (Fausey and others, 1987). Without agricultural drainage on much of Minnesota’s croplands, it would have been difficult to realize high enough crop yields to remain economically viable. Environmental concerns While drainage of Minnesota croplands provided the benefits mentioned above, several environmental concerns result. These include wetland loss, degradation of downstream water quality, and reduced [potential for] recharge. Early agricultural drainage efforts (pre-20th century) led to the disappearance of much of Minnesota’s natural wetlands. Increased focus on preventing or mitigating wetland loss over the last 50 years has helped curtail further losses, even as agricultural drainage proceeds. Prior to establishment of Minnesota statehood, wetlands accounted for more than 10 million acres in Minnesota, including prairie wetlands, peatlands, and forest wetlands that comprised approximately 19 percent of the total land area (Palmer, 1915; King, 1980). In 2018, only half of Minnesota’s pre-settlement wetlands remain, mostly in parts of the State that have not experienced widespread drainage, such as northern Minnesota. Water-quality monitoring has shown that agricultural drainage, in particular the practice of subsurface drainage, provides a direct flow path for nutrient (nitrogen and soluble phosphorus) losses to surface water resources. The negative consequences of agricultural drainage on surface water quality are well documented (for example, Dinnes and others, 2002; Kladivko and others, 2004; Richards and others, 2008; Rozemeijer and others, 2010; Schottler and others, 2013). Agricultural basins with a high percentage of agricultural drainage have been implicated as part of the cause of the Gulf of Mexico hypoxia zone due to excessive nitrogen export (Goolsby and Battaglin, 2001; Randall and Mulla, 2001). The connection of hydrological effects of agricultural subsurface drainage on groundwater recharge and aquifers, on the other hand, has not been well-established. Agricultural subsurface drainage intercepts infiltrating water below croplands and directly discharges the water to nearby surface waters. However, the size of the water balance shift from drained water that would have evapotranspired or run off the land to drained water that would recharge underlying aquifers has been poorly characterized (Schuh, 2008). Drain Tiles and Groundwater Given the poor accounting of subsurface drainage effects on groundwater resources, the Minnesota Ground Water Association (MGWA) deemed it imperative that we document these effects so that groundwater resources in agricultural regions with substantial drainage can be effectively managed. This white paper documents the relations of drain tiles and groundwater resources and discusses the historical significance of agricultural drainage practices, the recognized positive benefits and potential negative consequences of agricultural drainage practices, and the gaps in understanding of the connections between agricultural drainage and groundwater resources. The major messages emerged from the findings of this white paper are: Complex history. Minnesota has a long history of agricultural drainage, spanning over 150 years. Agricultural drainage, and the eventual widespread usage of subsurface drainage, can be separated into at least four distinct periods of time: (a) early drainage to get water off the land, pre-20th century; (b) the boom and bust era (1900-1945); (c) postwar resurgence of subsurface drainage and early conservation efforts (1945-1960); and, (d) emergence of the environmental movement (1960 to present). The State’s regulatory framework that both allowed for drainage and controlled its usage during these periods is complicated and has been governed by a patchwork of both State and Federal statutes. Drainage Provinces. This white paper advances the concept of tile drainage provinces to aid in the discussion of regional differences in subsurface drainage and its overall effect on groundwater resources. Built upon the concept of groundwater provinces (Minnesota Department of Natural Resources, 2001), three distinct tile drainage provinces were conceptualized: (1) the Southeastern Province; (2) the SouthCentral Province; and, (3) the Western Province. The distinct geology and the soils that developed in these regions have implications for each region’s subsurface drainage density and the potential implications for groundwater. Knowledge gaps. Several critical knowledge gaps are identified in this paper, creating opportunities for further research to improve our understanding for better managed water resources: Extent of drainage is unknown. Direct estimates of the extent of subsurface drainage do not exist in Minnesota. However, several indirect methods have been utilized to estimate subsurface drainage, from the field-scale to countylevel through the use of geographic information system (GIS) analysis and aerial photography. Based on a 2012 U.S. Geological Survey estimate of subsurface drainage extent (Nakagaki and Wieczorek, 2016), about 21% of the land area in Minnesota has some density of subsurface drainage. Effect of drainage on underlying aquifers is unknown. A basic understanding of unconfined and confined aquifers and their recharge is necessary to connect any hydrological effects from agricultural drainage to groundwater. The basic goal of subsurface drainage to efficiently drain saturated soils clearly alters the water balance in croplands. However, its overall effect on groundwater resources has been poorly characterized, and is in large part determined by the geology below drained areas and the arrangement of underlying aquifers. Water balance shifts. An improved understanding of historical water balance shifts from pre- to post-drainage periods is necessary to understand long-term implications on net groundwater recharge. Also, more direct field-scale studies and indirect modeling studies are needed to characterize water budgets for fields with subsurface drainage.

Minnesota

Geographic variation in Yellow-headed Blackbirds from the northern Great Plains

We assessed geographic variability in morphology among Yellow-headed Blackbirds ( Xanthocephalus xanthocephalus ) collected from breeding populations in Minnesota, North Dakota, and South Dakota in the United States and Alberta, Manitoba, and Saskatchewan in Canada during spring. Both male and female Yellow-headed Blackbirds tended to be larger in the more northern breeding populations. Males collected in Manitoba and southeast Saskatchewan tended to be more like populations from the United States, whereas other populations in Saskatchewan and Alberta populations were morphologically similar to each other. For females, however, only the Manitoba population was similar to the U. S. populations, and the females from the southeastern Saskatchewan were similar to other Saskatchewan birds. Southeastern Saskatchewan appears to represent a transitional region between northwestern and southeastern breeding populations of Yellow-headed Blackbirds.

The Condor

Desert tortoises in the Mojave and Colorado deserts

The desert tortoise ( Gopherus agassizii ) is a widespread species of the southwestern United States and Mexico. Within the United States, desert tortoises live in the Mojave, Colorado, and Sonoran deserts of southeastern California, southern Nevada, southwestern Utah, and western Arizona (Fig. 1). A substantial portion of the habitat is on lands administered by the U.S. Department of the Interior. The U.S. government treats the desert tortoise as an indicator or umbrella species to measure the health and well-being of the ecosystems it inhabits. The tortoise functions well as an indicator because it is long-lived, takes 12-20 years to reach reproductive maturity, and is sensitive to changes in the environment. In 1990 the U.S. Fish and Wildlife Service listed the species as threatened in the northern and western parts of its geographic range (Fig. 1) because of widespread population declines and overall habitat loss, deterioration, and fragmentation. Because some populations exhibit significant genetic, morphologic (see glossary), and behavioral differences, the Desert Tortoise Recovery Team identified six distinctive population segments (Fig. 1) for critical habitat protection and long-term conservation within the Mojave and Colorado deserts (e.g., Lamb et al. 1989; USFWS 1994). The population segments are representative of distinctive climatic, floristic, and geographic regions.

Arizona, California, Nevada, Utah

Trends of lesser prairie-chicken habitat extent and distribution on the Southern High Plains

The lesser prairie-chicken ( Tympanuchus pallidicinctus ) is a species of prairie grouse that occupies grassland ecosystems in the Southern and Central High Plains of the Great Plains. Reduced abundance and occupied ranges have led to increased conservation efforts throughout the species’ range. Habitat loss is considered the predominant cause of these declines. In the Southern High Plains of Texas and New Mexico, lesser prairie-chicken habitat corresponds to the Sand Shinnery Oak Prairie Ecoregion, which is comprised of a mixture of sand shinnery oak ( Quercus havardii) -dominated grasslands, sand sagebrush ( Artemisia filifolia )-dominated grasslands, and mixed grasslands. In sand shinnery oak–grassland communities, conversion to row-crop agriculture, continuous unmanaged livestock grazing, restriction of natural fire, invasive plant species (e.g., mesquite ( Prosopis spp. )), extensive use of herbicides, energy development, and a variety of other factors have also negatively affected ecosystem extent and function. We integrated historical maps and remote sensing-derived information to measure trends in the extent and geographical distribution of sand shinnery oak prairies in eastern New Mexico and northwest Texas. Potential lesser prairie-chicken habitat was reduced by 56% from a potential of 43,258 km 2 to 18,908 km 2 in ~115 years (since pre-settlement). Our assessment indicated both mixed grasslands and sand shinnery oak-dominated grasslands were transformed from large parcels of existing vegetation communities to urban settlements, row crops, roads, and industrial land uses by the 1970s. Currently, potential habitat is highly fragmented and restricted to isolated locations in Texas and New Mexico, with an increasing dominance in mixed grasslands, especially in the southeastern portion of the lesser prairie-chicken range. Sand shinnery oak-dominated grasslands have been declining rapidly, from 69% of its potential extent in 1985, 65% in 1995, 54% in 2005, to 42% in 2015. Mixed grasslands drastically declined to 50% of its potential distribution by 1985. Since then, it has been stable until the 2005–2015 period when it declined to 45% of its potential extent. Based on the 2015 assessment, the current potential habitat for lesser prairie chicken is estimated at 18,908 km 2 (1,890,800 ha or 4.6 million acres), where 13,126 km 2 corresponds to mixed grasslands and 5782 km 2 corresponds to sand shinnery oak-dominated grasslands.

New Mexico, Texas

Net-infiltration map of the Navajo Sandstone outcrop area in western Washington County, Utah

As populations grow in the arid southwestern United States and desert bedrock aquifers are increasingly targeted for future development, understanding and quantifying the spatial variability of net infiltration and recharge becomes critically important for inventorying groundwater resources and mapping contamination vulnerability. A Geographic Information System (GIS)-based model utilizing readily available soils, topographic, precipitation, and outcrop data has been developed for predicting net infiltration to exposed and soil-covered areas of the Navajo Sandstone outcrop of southwestern Utah. The Navajo Sandstone is an important regional bedrock aquifer. The GIS model determines the net-infiltration percentage of precipitation by using an empirical equation. This relation is derived from least squares linear regression between three surficial parameters (soil coarseness, topographic slope, and downgradient distance from outcrop) and the percentage of estimated net infiltration based on environmental tracer data from excavations and boreholes at Sand Hollow Reservoir in the southeastern part of the study area. Processed GIS raster layers are applied as parameters in the empirical equation for determining net infiltration for soil-covered areas as a percentage of precipitation. This net-infiltration percentage is multiplied by average annual Parameter-elevation Regressions on Independent Slopes Model (PRISM) precipitation data to obtain an infiltration rate for each model cell. Additionally, net infiltration on exposed outcrop areas is set to 10 percent of precipitation on the basis of borehole net-infiltration estimates. Soils and outcrop net-infiltration rates are merged to form a final map. Areas of low, medium, and high potential for ground-water recharge have been identified, and estimates of net infiltration range from 0.1 to 66 millimeters per year (mm/yr). Estimated net-infiltration rates of less than 10 mm/yr are considered low, rates of 10 to 50 mm/yr are considered medium, and rates of more than 50 mm/yr are considered high. A comparison of estimated net-infiltration rates (determined from tritium data) to predicted rates (determined from GIS methods) at 12 sites in Sand Hollow and at Anderson Junction indicates an average difference of about 50 percent. Two of the predicted values were lower, five were higher, and five were within the estimated range. While such uncertainty is relatively small compared with the three order-of-magnitude range in predicted net-infiltration rates, the net-infiltration map is best suited for evaluating relative spatial distribution rather than for precise quantification of recharge to the Navajo aquifer at specific locations. An important potential use for this map is land-use zoning for protecting high net-infiltration parts of the aquifer from potential surface contamination.

Utah

On the contribution of reconstruction labor wages and material prices to demand surge

Demand surge is understood to be a socio-economic phenomenon of large-scale natural disasters, most commonly explained by higher repair costs (after a large- versus small-scale disaster) resulting from higher material prices and labor wages. This study tests this explanation by developing quantitative models for the cost change of sets, or "baskets," of repairs to damage caused by Atlantic hurricanes making landfall on the mainland United States. We define six such baskets, representing the total repair cost, and material and labor components, each for a typical residential or commercial property. We collect cost data from the leading provider of these data to insurance claims adjusters in the United States, and we calculate the cost changes from July to January for nine Atlantic hurricane seasons at fifty-two cities on the Atlantic and Gulf Coasts. The data show that: changes in labor costs drive the changes in total repair costs; cost changes can vary significantly by geographic region and year; and cost changes for the residential basket of repairs are more volatile than the cost changes for the commercial basket. We then propose a series of multilevel regression models to predict the cost changes by considering several combinations of the following explanatory variables: the largest gradient wind speed at a city in a hurricane season; the number of tropical storms in a hurricane season whose center passes within 200 km of a city; and cost changes in the first two quarters of the year. We also allow the coefficients of the regression model to be stochastic, varying across groups defined by region of the Southeastern United States and year. Our best models predict that, for any city on the Gulf or Atlantic Coasts in any hurricane season, the residential total repair cost changes vary from 0.01 to 0.25, depending on the wind speed and number of storms, with an uncertainty of 0.1 (two standard errors of prediction) given the wind speed and number of storms. The commercial total repair cost changes vary from 0.005 to 0.15 with an uncertainty of 0.08. Our models including wind speed, the number of storms affecting a city, and cost changes in the first half of the year explain roughly half of the observed variability in cost changes. Additional explanatory variables that we have not considered may account for the remaining variability. Given these models, however, there is still considerable uncertainty in their predictions. This uncertainty arises from variations between groups defined by region and year, not from variations within a given region and year.

SESM

Range-wide population projections for Northern Red-Bellied Cooters (Pseudemys rubriventris)

Northern Red-Bellied Cooters ( Pseudemys rubriventris ) have a disjunct distribution with a relictual population in southeastern Massachusetts and a larger range across the mid-Atlantic United States. The relictual population is currently listed with protections under the U.S. Endangered Species Act but the status of the population in the remainder of the species' range has not been assessed, and there is concern that it may be at risk of extinction without protection. The U.S. Fish and Wildlife Service requires scientific information of the species' status to inform conservation decisions. There is little empirical information available from P. rubriventris populations and, furthermore, the majority of what exists comes from the disjunct northern subpopulation. To fill data gaps in the species' life history and reduce geographic bias, we supplement available data from P. rubriventris with demographic rate estimates from other Pseudemys species to parameterize an age-structured population projection model. Our estimate of mean population growth rate was 0.987 (0.92–1.04), indicating that P. rubriventris populations may be in decline. However, there was considerable uncertainty in our results, with 35% of projections resulting in stable or increasing populations. Additional uncertainty about parameter values, geographic variation, and current threats limit the assessment. We discuss the merits and limitations of our population projection modeling (PPM) approach where other analytical methods are precluded by lack of available data.

Maryland, Massachusetts, New Jersey, North Carolin

Magnitude and Frequency of Rural Floods in the Southeastern United States, 2006: Volume 3, South Carolina

A multistate approach was used to update methods for estimating the magnitude and frequency of floods in rural, ungaged basins in South Carolina, Georgia, and North Carolina that are not substantially affected by regulation, tidal fluctuations, or urban development. Annual peak-flow data through September 2006 were analyzed for 943 streamgaging stations having 10 or more years of data on rural streams in South Carolina, Georgia, North Carolina, and adjacent parts of Alabama, Florida, Tennessee, and Virginia. Flood-frequency estimates were computed for the 943 stations by fitting the logarithms of annual peak flows for each station to a Pearson Type III distribution. As part of the computation of flood-frequency estimates for the stations, a new value for the generalized skew coefficient was developed using a Bayesian generalized least-squares regression model. Additionally, basin characteristics for these stations were computed by using a geographical information system and automated computer algorithms. Exploratory regression analyses using ordinary least-squares regression completed on the initial database of 943 gaged stations resulted in defining five hydrologic regions for South Carolina, Georgia, and North Carolina. Stations with drainage areas less than 1 square mile were removed from the database, and a procedure to examine for basin redundancy (based on drainage area and periods of record) also resulted in the removal of some stations from the regression database. Regional regression analysis, using generalized least-squares regression, was used to develop a set of predictive equations for estimating the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent chance exceedance flows for rural ungaged basins in Georgia, South Carolina, and North Carolina. Flood-frequency estimates and basin characteristics for 828 streamgaging stations were combined to form the final database used in the regional regression analysis. The final predictive equations are all functions of drainage area and percentage of the drainage basin within each hydrologic region. Average errors of prediction for these regression equations range from 34.0 to 47.7 percent. Peak-flow records at 25 regulated stations were assessed to determine if a flood-frequency analysis was appropriate. Based on those assessments, flood-frequency estimates are provided for three regulated stations. Annual peak-flow data are provided for the regulated stations in an appendix.

South Carolina

Vulnerability assessment in and near Theodore Roosevelt National Park, North Dakota

Theodore Roosevelt National Park is in western North Dakota and was established in 1978 under the National Wilderness Preservation system to preserve and protect the qualities of the North Dakota Badlands, including the wildlife, scenery, and wilderness. The park is made up of three units (North, Elkhorn Ranch, and South) that are connected by the Little Missouri River, which was identified by the National Park Service as a significant resource essential to fulfilling the park's purpose. The development of oil and gas (OG) resources has expanded in the past two decades in the region surrounding Theodore Roosevelt National Park. This expansion of OG development outside park boundaries increases the potential for adverse environmental and economic effects inside the park boundaries, especially for the hydrologic processes within Theodore Roosevelt National Park. This report assesses the vulnerability of critical components that contribute to supporting plants and wildlife of the Northwestern Great Plains ecological region and Theodore Roosevelt National Park’s mission of preservation. Critical components include land cover, slope, soil saturated hydraulic conductivity, distance to Ovis canadensis (Shaw, 1804) (bighorn sheep) critical habitat, distance to springs, distance to rivers and streams, and distance to surficial aquifers. The study area included all the 12-digit hydrologic units within the watershed boundary dataset that intersect Theodore Roosevelt National Park or are within the 12-digit hydrologic units for Little Missouri River tributaries that flow into the park. Critical components that had existing publicly available geographic data were assessed and assigned vulnerability index values. These values were then summed to develop a vulnerability score and mapped. OG development and associated transportation infrastructure, referred to as “stressors” in this report, with publicly available geographic data were mapped, and then flow paths were generated starting from the stressor locations to assess their likelihood to contaminate vulnerable areas within the study area. The North Unit had the most area with moderate, high, and very high vulnerability. These areas occurred all across the southern and eastern parts of the North Unit where the Little Missouri River, surficial aquifer, wetland type land covers, and bighorn sheep critical habitat are present. Several stressor flow paths from pipelines and highways cross these areas and may pose the most risk to the vulnerable areas identified. In the Elkhorn Ranch Unit, areas with moderate, high, and very high vulnerability were in the southeastern part of the unit, where the Little Missouri River, surficial aquifer, wetland type land covers, and bighorn sheep critical habitat are present. The stressor flow paths in the Elkhorn Ranch Unit follow the length of the Little Missouri River and all its tributaries in the study area. The stressor flow paths originated from crude oil wells and pipelines. In the South Unit, one area had moderate, high, and very high vulnerability. This area is where the Little Missouri River and bighorn sheep critical range are present. The stressor flow paths in the South Unit follow the length of the Little Missouri River and nearly all its tributaries in the study area. Several stressor flow paths cross the one identified vulnerable area that originated from crude oil wells.

North Dakota

Magnitude and frequency of rural floods in the southeastern United States, 2006: Volume 1, Georgia

A multistate approach was used to update methods for estimating the magnitude and frequency of floods in rural, ungaged basins in Georgia, South Carolina, and North Carolina that are not substantially affected by regulation, tidal fluctuations, or urban development. Annual peak-flow data through September 2006 were analyzed for 943 streamgaging stations having 10 or more years of data on rural streams in Georgia, South Carolina, North Carolina, and adjacent parts of Alabama, Florida, Tennessee, and Virginia. Flood-frequency estimates were computed for the 943 stations by fitting the logarithms of annual peak flows for each station to a Pearson Type III distribution. As part of the computation of flood-frequency estimates for these streamgaging stations, a new value for the generalized-skew coefficient was developed by using a Bayesian generalized least-squares regression model. Additionally, basin characteristics for the streamgaging stations were computed by using a geographical information system and automated computer algorithms. Regional regression analysis, using generalized least-squares regression, was used to develop a set of predictive equations for estimating the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent chance exceedance flows for rural ungaged basins in Georgia, South Carolina, and North Carolina. Flood-frequency estimates and basin characteristics for 828 stream-gaging stations were combined to form the final database used in the regional regression analysis. Five hydrologic regions were developed for Georgia, South Carolina, and North Carolina. The final predictive equations are all functions of drainage area and percentage of the drainage basin within each hydrologic region. Average standard errors of prediction for these regression equations range from 34.5 to 47.7 percent.

Georgia

Science Plan, U.S. Geological Survey Florida District

This Science Plan has been prepared by the Florida District of the U.S. Geological Survey (USGS) as a tool to provide direction for the scientific work to be accomplished in the District during the next 5-10 years. A Science Plan can serve as a guide to determine the optimum use of the limited financial resources of the USGS in Florida to address water resource issues. The Florida District has four primary operational centers geographically distributed across the State, in Tallahassee, Orlando, Tampa, and Miami, with a laboratory in Ocala and field offices in Jacksonville and Fort Myers. Other USGS discipline offices in Florida are located in Gainesville (biology), St. Petersburg (geology), and Miami (restoration ecology) (fig.1). Although some differences exist in programs among the four water-resource offices because of differing physiographic settings and information needs, many common elements are present and these common elements are the focus of this District Science Plan. Science Plan development was based on other planning documents including individual Science Plans prepared by personnel in each of the four primary Florida water resource offices, and strategic planning documents of the Southeastern Region, Water Resources Discipline (WRD), and the USGS. A broad cross-section of District staff, representing all primary offices, a number of different scientific disciplines, and different programs of the District (data collection, investigations, and research) collaborated on the development of this Science Plan. As part of the development process, input was solicited from staff in every office and considered for inclusion in the plan. The Science Plan will be evaluated on an ongoing basis to ensure its continued relevancy to recognized water resources needs in Florida, and to guide future program development and collaboration with our existing and potential partners and customers, both within and outside the USGS.

Florida

Patterns of genetic differentiation and conservation of the slabside pearlymussel, Lexingtonia dolabelloides (Lea, 1840) in the Tennessee River drainage

The restoration and recovery of imperiled mussel species will require the re-establishment of populations into historically occupied habitats. The possible existence of genetic differentiation among populations should be considered before inter-basin transfers are made. Eighty individuals of the federal candidate species Lexingtonia dolabelloides were sampled from populations in the North Fork Holston, Middle Fork Holston, Clinch, Paint Rock and Duck rivers of the Tennessee River basin in the southeastern United States. We sequenced 603 base-pairs of a mitochondrial DNA gene (ND-1) and 512 base-pairs of a nuclear DNA gene (ITS-1). Analyses of molecular variation (AMOVA) values for both genes indicated that the majority of variation in L. dolabelloides resided within populations (82.9-88.3%), with 11.7-17.1% of variation among populations. Haplotype frequencies differed significantly among populations for both genes sequenced. Clustering of haplotypes in minimum-spanning networks did not conform stringently to population boundaries, reflecting high within-population and low between-population variability. Maximum parsimony analysis did not identify any population as a monophyletic lineage. A Mantel test showed no significant correlation between geographical stream distance and genetic distance, thus not supporting a pattern of isolation-by-distance. Overall, results provided support to manage fragmented populations of L. dolabelloides in the Tennessee River drainage as two management units (MUs), but did not provide evidence for the existence of ESUs following published molecular criteria. ?? The Author 2005. Published by Oxford University Studies on behalf of The Malacological Society of London, all rights reserved.

Journal of Molluscan Studies

Spatial digital database for the tectonic map of southeast Arizona

A spatial database was created for Drewes' (1980) tectonic map of southeast Arizona: this database supercedes Drewes and others (2001, ver. 1.0). Staff and a contractor at the U.S. Geological Survey in Tucson, Arizona completed an interim digital geologic map database for the east part of the map in 2001, made revisions to the previously released digital data for the west part of the map (Drewes and others, 2001, ver. 1.0), merged data files for the east and west parts, and added additional data not previously captured. Digital base map data files (such as topography, roads, towns, rivers and lakes) are not included: they may be obtained from a variety of commercial and government sources. This digital geospatial database is one of many being created by the U.S. Geological Survey as an ongoing effort to provide geologic information in a geographic information system (GIS) for use in spatial analysis. The resulting digital geologic map database can be queried in many ways to produce a variety of geologic maps and derivative products. Because Drewes' (1980) map sheets include additional text and graphics that were not included in this report, scanned images of his maps (i1109_e.jpg, i1109_w.jpg) are included as a courtesy to the reader. This database should not be used or displayed at any scale larger than 1:125,000 (for example, 1:100,000 or 1:24,000). The digital geologic map plot files (i1109_e.pdf and i1109_w.pdf) that are provided herein are representations of the database (see Appendix A). The map area is located in southeastern Arizona (fig. 1). This report describes the map units (from Drewes, 1980), the methods used to convert the geologic map data into a digital format, the ArcInfo GIS file structures and relationships, and explains how to download the digital files from the U.S. Geological Survey public access World Wide Web site on the Internet. The manuscript and digital data review by Helen Kayser (Information Systems Support, Inc.) is greatly appreciated.

Arizona

Population structure of Desmophyllum pertusum found along the United States eastern continental margin

Objective The connectivity and genetic structuring of populations throughout a region influence a species’ resilience and probability of recovery from anthropogenic impacts. By gaining a comprehensive understanding of population connectivity, more effective management can be prioritized. To assess the connectivity and population genetic structure of a common cold-water coral species, Desmophyllum pertusum ( Lophelia pertusa ), we performed Restriction-site Associated DNA Sequencing (RADseq) on individuals from nine sites ranging from submarine canyons off New England to the southeastern coast of the United States (SEUS) and the Gulf of Mexico (GOM). Fifty-seven individuals and 3,180 single-nucleotide polymorphisms (SNPs) were used to assess genetic differentiation. Results High connectivity exists among populations along the SEUS, yet these populations were differentiated from those to the north off New England and in Norfolk Canyon along the North Atlantic coast of the United States, as well as those in the GOM. Interestingly, Norfolk Canyon, located just north of North Carolina, and GOM populations exhibited low levels of genetic differentiation, corroborating previous microsatellite analyses and signifying gene flow between these populations. Increasing sample sizes from existing populations and including additional sampling sites over a larger geographic range would help define potential source populations and reveal fine-scale connectivity patterns among D. pertusum populations.

Atlantic coastal margin