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At least 127 records · Page 7Linked to original sources

Gulf Coast Basin CORE-CM initiative final report

The Bureau of Economic Geology at the University of Texas at Austin (UT-BEG) is leading the Gulf Coast Carbon Ore, Rare Earth, and Critical Minerals (CORE-CM) Initiative to assess the potential to produce critical minerals (CMs), including rare earth elements (REEs) from coal, coal ash, and produced water related to oil and gas production, and related materials (alumina processing waste [red mud], heavy mineral sands, graphite, and zeolite) within the Gulf Coast Basin. This project represents the first phase in a long-term program and provides reconnaissance data that will be foundational for future work by assessing resources and suggesting plans to be conducted in future work and expanding stakeholder engagement. The project includes several tasks designed to identify, characterize, and assess several necessary aspects for development of CMs and REEs in the Gulf Coast Basin.

Gulf Coast basin↗

Final project memorandum: sea-level rise modeling handbook: resource guide for resource managers, engineers, and scientists

Coastal wetlands of the Southeastern United States are undergoing retreat and migration from increasing tidal inundation and saltwater intrusion attributed to climate variability and sea-level rise. Much of the literature describing potential sea-level rise projections and modeling predictions are found in peer-reviewed academic journals or government technical reports largely suited to reading by other Ph.D. scientists who are more familiar or engaged in the climate change debate. Various sea-level rise and coastal wetland models have been developed and applied of different designs and scales of spatial and temporal complexity for predicting habitat and environmental change that have not heretofore been synthesized to aid natural resource managers of their utility and limitations. Training sessions were conducted with Federal land managers with U.S. Fish and Wildlife Service, National Park Service, and NOAA National Estuarine Research Reserves as well as state partners and nongovernmental organizations across the northern Gulf Coast from Florida to Texas to educate and to evaluate user needs and understanding of concepts, data, and modeling tools for projecting sea-level rise and its impact on coastal habitats and wildlife. As a result, this handbook was constructed from these training and feedback sessions with coastal managers and biologists of published decision-support tools and simulation models for sea-level rise and climate change assessments. A simplified tabular context was developed listing the various kinds of decision-support tools and ecological models along with criteria to distinguish the source, scale, and quality of information input and geographic data sets, physical and biological constraints and relationships, datum characteristics of water and land elevation components, utility options for setting sea-level rise and climate change scenarios, and ease or difficulty of storing, displaying, or interpreting model output. The handbook is designed to be a primer to understanding sea-level rise and a practical synthesis of the current state of knowledge and modeling tools as a resource guide for DOl land management needs and facilitating Landscape Conservation Cooperative (LCC) research and conservation initiatives.

Conference Paper↗

Interim Progress Report on the Application of an Independent Components Analysis-based Spectral Unmixing Algorithm to Beowulf Computers

This report describes work done to implement an independent-components-analysis (ICA) -based blind unmixing algorithm on the Eastern Region Geography (ERG) Beowulf computer cluster. It gives a brief description of blind spectral unmixing using ICA-based techniques and a preliminary example of unmixing results for Landsat-7 Thematic Mapper multispectral imagery using a recently reported1,2,3 unmixing algorithm. Also included are computer performance data. The final phase of this work, the actual implementation of the unmixing algorithm on the Beowulf cluster, was not completed this fiscal year and is addressed elsewhere. It is noted that study of this algorithm and its application to land-cover mapping will continue under another research project in the Land Remote Sensing theme into fiscal year 2004.

Open-File Report↗

U.S. Geological Survey Middle Rio Grande Basin Study; Proceedings of the first annual workshop, Denver, Colorado, November 12-14, 1996

Approximately 40 percent (about 600,000 people) of the total population of New Mexico lives within the Middle Rio Grande Basin, which includes the City of Albuquerque. Ongoing analyses of the central portion of the Middle Rio Grande Basin by the U.S. Geological Survey (USGS) in cooperation with the City of Albuquerque and other cooperators have shown that ground water in the basin is not as readily accessible as earlier studies indicated. A more complete characterization of the ground-water resources of the entire Middle Rio Grande Basin is hampered by a scarcity of data in the northern and southern areas of the basin. The USGS Middle Rio Grande Basin Study is a 5-year effort by the USGS and other agencies to improve the understanding of the hydrology, geology, and land-surface characteristics of the Middle Rio Grande Basin. The primary objective of this study is to improve the understanding of the water resources of the basin. Of particular interest is to determine the extent of hydrologic connection between the Rio Grande and the Santa Fe Group aquifer. Additionally, ground-water quality affects the availability of water supplies in the basin. Improving the existing USGS- constructed ground-water flow model of the Middle Rio Grande Basin will integrate all the various tasks that improve our knowledge of the various components of the Middle Rio Grande water budget. Part of this improvement will be accompanied by extended knowledge of the aquifer system beyond the Albuquerque area into the northern and southern reaches of the basin. Other improvements will be based on understanding gained through process-oriented research and improved geologic characterization of the deposits. The USGS will study the hydrology, geology, and land-surface characteristics of the basin to provide the scientific information needed for water- resources management and for managers to plan for water supplies needed for a growing population. To facilitate exchange of information among the many USGS scientists working in the Middle Rio Grande Basin, yearly technical meetings are planned for the anticipated 5-year study. These meetings provide an opportunity to present research results and plan new field efforts. This report documents the results of research presented at the first technical workshop held in Denver, Colorado, in November 1996. The report is organized into this introduction, five chapters that focus on USGS investigations in progress in the Middle Rio Grande Basin, and three appendixes with supplemental information. The first chapter provides an overview of the USGS program in the basin. The second chapter describes geographic data and analysis efforts in the basin. The third chapter details work being done on the hydrogeologic framework of the basin. The fourth chapter describes studies on ground-water availability in the basin and is divided into three areas of research: ground-water/surface-water interaction, ground-water flow and aquifer properties, and recharge. The fifth chapter is devoted to an overview of New Mexico District Cooperative Program studies in the basin. Finally, the appendixes list publications and presentations made during the first year of the study and 1996 workshop attendees. The report concludes with a list of selected references relevant to the study. The information in this report presents preliminary results of an evolving study. As the study progresses and individual projects publish their results in more detail, the USGS hopes to expand the scientific basis needed for management decisions regarding the Middle Rio Grande Basin.

Open-File Report↗

Compilation of existing data for sand resource studies in Federal and California State Waters of the San Francisco, Oceanside, and Silver Strand littoral cell study areas along the continental shelf of California—Strategy for field studies and sand resource assessment

Executive Summary The Sand Resources Project was established through collaborative agreements between the U.S. Geological Survey (USGS), the Bureau of Ocean Energy Management (BOEM), and the California Ocean Protection Council (OPC) with the purpose of evaluating sand and gravel resources in Federal and California State Waters for potential use in future beach-nourishment projects. Project partners worked in collaboration with California Coastal Sediment Management Workgroup (CSMW) members to define priority study areas for this work based on the potential for finding sand within the broader region and the needs for this sand as shown by beach erosion areas of concern in the adjacent littoral cells. The final study areas were defined to be (1) the San Francisco Littoral Cell, (2) the Oceanside Littoral Cell, and (3) the Silver Strand Littoral Cell. A two-stage approach was used to assess the study areas. This report addresses the initial stage, which is a synthesis of the existing geophysical and sediment-sampling data in each area. This allowed for evaluations of the data availability, data gaps, and general patterns of sediment thickness and grain size. This report provides a description of the methods and results of this synthesis. The findings from this work were used to refine study area boundaries and develop sampling plans for stage two of the project. Stage two of the project, the results of which will be published separately, will be the collection, processing, and synthesis of new data, including high-resolution geophysical surveys and sediment cores within the three study areas. The data collected will provide new information about the three study areas including sediment thickness, grain-size distributions, and total organic carbon. The description and results of stage two of the work is included in another USGS report (Warrick and others, 2022).

California↗

Management-driven science synthesis: An evaluation of Everglades restoration trajectories

The Synthesis of Everglades Restoration andEcosystem Services (SERES) Project was funded in 2010 by the U.S. Department of Interior (DOI) through the Critical Ecosystem Studies Initiative (CESI) and established to synthesize the ever-growing body of Everglades scientific information with the goal of addressing topics that have hampered restoration since the Comprehensive Everglades Restoration Plan (CERP) was passed in 2000. A distinguishing characteristic of this synthesis effort was that the target end-user was a management/ decision-maker audience. Specifically, the aim was to address the questions of the water managers and other decision leaders in a way that would illuminate and inform but not constrain or specify decisions. Since its inception, the SERES Project has been managed by the Everglades Foundation; however, a core group of scientifc experts from agencies, academic institutions, and the private sector have contributed to the project (see list on page 4). We began the project by interviewing key officials, including resource managers, decision-makers, and heads of agencies and environmental organizations. The objective of these interviews was to establish the Key Science Management Questions that needed to be addressed in order to advance restoration of the Everglades. The resulting questions led to the organization of project teams focused on Hydrology, Water Quality, Soils, Trophic Dynamics, and Landscape Pattern. In order to establish the technical basis for the project, we conducted in depth reviews of the recent scientifc literature, evaluation tools and models, and available data in each of these core areas. Finally, we developed a suite of restoration options that would aid us in addressing the Key Questions and evaluated their relative performance from hydrological, ecological, and economic perspectives. General fndings of the SERES Project are described in subsequent sections, and technical reviews and results of analyses supporting this document are available in reports on the project website.

Florida↗

Hydrography of and biogeochemical inputs to Liberty Bay, a small urban embayment in Puget Sound, Washington

This multi-chapter report describes scientific and logistic understanding gained from a 2 year proof-of-concept study in Liberty Bay, a small urban embayment in central Puget Sound, Washington. The introductory chapter describes the regional and local setting, the high-level study goals, the site-specific urban stressors, and the interdisciplinary study approach. Subsequent data chapters describe detailed studies of various components of the Liberty Bay ecosystem: the aquatic environment (Chapter 2), surface and groundwater quantity and quality (Chapter 3), sediment quality (Chapter 4), eelgrass habitat (Chapter 5), carbon and nitrogen sources (Chapter 6), and a statistical model relating herring spawn probability to shoreline attributes (Chapter 7). The final chapter synthesizes knowledge about individual components into a system-wide understanding of how urbanization may affect the Liberty Bay ecosystem. The Liberty Bay study was conducted as part of the U.S. Geological Survey's Coastal Habitats in Puget Sound project, an interdisciplinary collaboration to understand physical and biological processes that affect nearshore ecosystems.

Scientific Investigations Report↗

High-Flow Experimental Outcomes to Inform Everglades Restoration, 2010–22

The Decompartmentalization Physical Model (DPM) was an experimental facility in the central Everglades operated between 2010 and 2022 to release high flows through a levee-enclosed area of degraded ridge and slough wetland that had been isolated from flow for sixty years. The purpose of DPM experimental program was to make measurements before, during, and after seasonal high-flow releases that could help guide the Congressionally authorized Everglades restoration project known as the Decompartmentalization and Sheet Flow Enhancement Project. The DPM facility was operated by the South Florida Water Management District, with the U.S. Geological Survey (USGS) and several universities participating in experimental design and leading aspects of the research. The USGS research at DPM focused on measuring high-flow hydraulics and its sedimentary and ecological responses in downstream wetlands. USGS investigated interactions between flow and vegetation and microtopography that influenced flow velocity and water depth, bed shear stress, sediment entrainment, and the resulting downstream transport of suspended sediment and fate of particle-associated phosphorus. USGS also investigated high-flow changes in water-column mixing and gas exchange and resulting effects on metabolism of the aquatic ecosystem (primary productivity and respiration). USGS also investigated effects of built structures such as levee gaps that were constructed to reconnect levee-enclosed basins. This report describes the methods and results of the USGS-led data collection at DPM. The USGS studies at DPM have identified factors that influence effectiveness of restoration, specifically how high-flow releases maximize sheet flow and affect sediment and nutrient dynamics while minimizing undesirable outcomes caused by past management that bypassed wetlands by conveying polluted water through canals to ecologically sensitive downstream areas. The DPM high-flow experiments reconnected the Water Conservation Area 3A and Water Conservation Area 3B basins, and it therefore has become a central feature of the restoration’s Decompartmentalization and Sheet Flow Enhancement Project. DPM’s scientific findings have already influenced the adaptive management of Everglades restoration in guiding elements of the final design and implementation of the Central Everglades Planning Project-South. In addition to serving Everglades restoration, the DPM has the potential to influence similar adaptive management programs throughout the nation’s network of federal and state-managed river corridors, floodplains, and riparian ecosystems.

Florida↗

Multipurpose Wetlands Phase II/III: final design and ongoing research investigations

The Eastern Municipal Water District (EMWD), the Bureau of Reclamation (USBR), and the National Biological Survey (NBS), in consultation with other governmental agencies, the academic community, and environmental groups, are involved in a cooperative wetlands research and demonstration effort. This report reflects progress through the first 3 years of a 5-year program. The goal of the Multipurpose Wetlands Research and Demonstration Project is to evaluate and expand the use of reclaimed water and contaminated ground water through the incorporation of multipurpose constructed wetlands into EMWD's total water resources management program. The focus of the wetlands is the development of design, construction, and operation criteria that will provide a cost-effective and innovative alternative for managing water resources and provide other public benefits in arid areas. The program also recognizes the fact that naturally-occurring wetlands, both coastal and inland, have been disappearing at an alarming rate.

Report↗

Climate-resource scenarios to inform climate change adaptation in Wrangell-St. Elias National Park and Preserve: Summary of 2021 climate change scenario planning

This report illustrates use of scenario planning as a climate change adaptation tool supporting Wrangell-St. Elias National Park and Preserve’s Resource Stewardship Strategy. The primary objective of scenario planning is to help resource managers and scientists make management and planning decisions informed by assessments of critical future uncertainties. This report outlines a process that synthesized future climate projections into three distinct but plausible and relevant climate summaries for the focal area and used them to develop climate-resource scenarios through participatory scenario planning. Initial steps identified the priority resource management topics and the corresponding related climate uncertainties. Next, local climate summaries were used to develop divergent climate futures: those that describe the broadest possible range of plausible conditions while capturing relevant uncertainty. The final phase further developed the climate futures and their resource implications. These participatory scenario planning exercises occurred virtually in fall (August–November) 2021. The climate-resource scenarios informed adaptation strategies in conjunction with the park’s Resource Stewardship Strategy development. The scope and complexity of this effort is unique but elements from the scenarios and resource implications have broad applicability to other large, protected areas in Alaska and Northwest Canada.

Alaska↗

Landbird trends in national parks of the North Coast and Cascades Network, 2005-12

National parks in the North Coast and Cascades Network (NCCN) can fulfill vital roles as refuges for bird species dependent on late-successional forest conditions and as reference sites for assessing the effects of land-use and land-cover changes on bird populations throughout the larger Pacific Northwest region. Additionally, long-term monitoring of landbirds throughout the NCCN provides information that can inform decisions about important management issues in the parks, including visitor impacts, fire management, and the effects of introduced species. In 2005, the NCCN began implementing a network-wide Landbird Monitoring Project as part of the NPS Inventory and Monitoring Program. In this report, we discuss 8-year trends (2005–12) of bird populations in the NCCN, based on a sampling framework of point counts established in three large wilderness parks (Mount Rainier, North Cascades, and Olympic National Parks), 7-year trends at Lewis and Clark National Historical Park (sampled in 2006, 2008, 2010, and 2012), and 5-year trends at San Juan Islands National Historical Park (sampled in 2007, 2009, and 2011). Our analysis encompasses a fairly short time span for this long-term monitoring program. The first 2 years of the time series (2005 and 2006) were implemented as part of a limited pilot study that included only a small subset of the transects. The subsequent 6 years (2007–12) represent just a single cycle through 5 years of alternating panels of transects in the large parks, with the first of five alternating panels revisited for the first time in 2012. Of 204 transects that comprise the six sampling panels in the large parks, only 68 (one-third) have thus been eligible for revisit surveys (34 during every year after 2005, and an additional 34 only in 2012) and can contribute to our current trend estimates. We therefore initiated the current analysis with a primary goal of testing our analytical procedures rather than detecting trends that might be strong enough to drive conservation or management decisions in the parks or elsewhere. We expect that aggregated trend detection results may change substantially over the next several years, as the number of transects with revisit histories triples and the spatial dispersion of transects contributing to trend estimates also improves greatly. In the meantime, caution should be exercised in interpreting the importance of trends, as individual years can have very large influences on the direction and magnitude of trends in a time series of such limited duration (and limited numbers of repeat visits at the small parks). Nevertheless, we estimated trends for 43 species at Mount Rainier National Park, 53 species at North Cascades National Park Complex, and 41 species at Olympic National Park. Of 137 park-species combinations (including combined-park analyses), we found 16 significant decreases (12 percent) and five significant increases (4 percent). We identify several limitations of the current analytical framework for trend assessment but suggest that the overall sampling design is strong and amenable to analysis by more recently developed model-based methods. These could provide a more flexible framework for examining trends and other population parameters of interest, as well as testing hypotheses that relate the distribution and abundance of species to environmental covariates. A model-based approach would allow for modeling various components of the detection process and analyzing observations (detection process), population state (occupancy, population size, density), and change (trend, local extinction and colonization rates turnover) simultaneously. Finally, we also evaluate operational aspects of NCCN Landbird Monitoring Project, and conclude that our robust, multi-party partnership is successfully implementing the project as it was envisioned.

British Columbia;Oregon;Washington↗

Rio Grande transboundary integrated hydrologic model and water-availability analysis, New Mexico and Texas, United States, and Northern Chihuahua, Mexico

Errata **September 28, 2018: The purpose of a USGS Open-file report (OFR) is dissemination of information that must be released immediately to fill a public need or information that is not sufficiently refined to warrant publication in one of the other USGS series. As part of that refinement process, an error was discovered in one of the input data sets of the Rio Grande Transboundary Integrated Hydrologic Model (RGTIHM) that this OFR was based upon. The error involved the assignment of storage properties to “phantom cells.” Phantom cells are required for most variants of MODFLOW that use a structured finite-difference grid when individual stratigraphic layers are represented as separate layers. Using phantom cells is a common practice that allows separate model layers to be maintained without having to combine stratigraphic layers into equivalent model layers or to use an unstructured grid. Typically, phantom cell horizontal hydraulic conductivities and storage properties are set to a small number and vertical hydraulic conductivities are set to a number large enough to allow vertical flow between the vertically adjacent layers. In the RGTIHM, the specific storage properties of the phantom cells for the upper (RGTIHM layers 3 and 4), middle (RGTIHM layers 5 and 6), and lower (RGTIHM layers 7 and 8) members of the Santa Fe Group were inadvertently assigned a value of 1 feet -1 . The revision of these specific storage values to a small number (1.0 x 10 -09 feet -1 ) required additional trial-and-error model calibration and a new sensitivity analysis. After calibration, the overall model fit remained similar to the fit described in the OFR, but the fit for many individual features such as project water available for diversions at the American Canal and Acequia Madre improved due to the reduction in flow coming from lower layers. Overall, there is still an average net depletion of groundwater flow, and the conclusions of the report are not changed. The revised average annual groundwater flow depletion simulated for the period 1953-2014 is -1,480 acre-feet/year for the entire model region, and -3,660 acre-feet/year for the portion of the model in the United States. The final version of the model will be the basis of the USGS Scientific Investigations Report that will supersede this OFR. An updated Model Archive of RGTIHM is available upon request to the USGS California Water Science Center. The corrected version of the model WAS the basis for the USGS Scientific Investigations Report that SUPERSEDED this Open-File Report.** Abstract Changes in population, agricultural development and practices (including shifts to more water-intensive crops), and climate variability are increasing demands on available water resources, particularly groundwater, in one of the most productive agricultural regions in the Southwest—the Rincon and Mesilla Valley parts of Rio Grande Valley, Doña Ana and Sierra Counties, New Mexico, and El Paso County, Texas. The goal of this study was to produce an integrated hydrological simulation model to help evaluate water-management strategies, including conjunctive use of surface water and groundwater for historical conditions, and to support long-term planning for the Rio Grande Project. This report describes model construction and applications by the U.S. Geological Survey, working in cooperation and collaboration with the Bureau of Reclamation. This model, the Rio Grande Transboundary Integrated Hydrologic Model, simulates the most important natural and human components of the hydrologic system, including selected components related to variations in climate, thereby providing a reliable assessment of surface-water and groundwater conditions and processes that can inform water users and help improve planning for future conditions and sustained operations of the Rio Grande Project (RGP) by the Bureau of Reclamation. Model development included a revision of the conceptual model of the flow system, construction of a Transboundary Rio Grande Watershed Model (TRGWM) water-balance model using the Basin Characterization Model (BCM), and construction of an integrated hydrologic flow model with MODFLOW-One-Water Hydrologic Flow Model (referred to as One Water). The hydrologic models were developed for and calibrated to historical conditions of water and land use, and parameters were adjusted so that simulated values closely matched available measurements (calibration). The calibrated model was then used to assess the use and movement of water in the Rincon Valley, Mesilla Basin, and northern part of the Conejos-Médanos Basin, with the entire region referred to as the “Transboundary Rio Grande” or TRG. These tools provide a means to understand hydrologic system response to the evolution of water use in the region, its availability, and potential operational constraints of the RGP. The conceptual model identified surface-water and groundwater inflows and outflows that included the movement and use of water both in natural and in anthropogenic systems. The groundwater-flow system is characterized by a layered geologic sedimentary sequence combined with the effects of groundwater pumping, operation of the RGP, natural runoff and recharge, and the application of irrigation water at the land surface that is captured and reused in an extensive network of canals and drains as part of the conjunctive use of water in the region. Historical groundwater-level fluctuations followed a cyclic pattern that were aligned with climate cycles, which collectively resulted in alternating periods of wet or dry years. Periods of drought that persisted for one or more years are associated with low surface-water availability that resulted in higher rates of groundwater-level decline. Rates of groundwater-level decline also increased during periods of agricultural intensification, which necessitated increasing use of groundwater as a source of irrigation water. Agriculture in the area was initially dominated by alfalfa and cotton, but since 1970 more water-intensive pecan orchards and vegetable production have become more common. Groundwater levels substantially declined in subregions where drier climate combined with increased demand, resulting in periods of reduced streamflows. Most of the groundwater was recharged in the Rio Grande Valley floor, and most of the pumpage and aquifer storage depletion was in Mesilla Basin agricultural subregions. A cyclic imbalance between inflows and outflows resulted in the modeled cyclic depletion (groundwater withdrawals in excess of natural recharge) of the groundwater basin during the 75-year simulation period of 1940–2014. Changes in groundwater storage can vary considerably from year to year, depending on land use, pumpage, and climate conditions. Climatic drivers of wet and dry years can greatly affect all inflows, outflows, and water use. Although streamflow and, to a minor extent, precipitation during inter-decadal wet-year periods replenished the groundwater historically, contemporary water use and storage depletion could have reduced the effects of these major recharge events. The average net groundwater flow-rate deficit for 1953–2014 was estimated to be about 8,990 acre-feet per year.

New Mexico, Northern Chihuahua, Texas↗

Inventory of the mosses, liverworts, and lichens of Olympic National Park, Washington- Species list

The identification of non-vascular cryptogam species (lichens, mosses, liverworts, and hornworts) is especially challenging because of their small size, their often microscopic or chemical distinguishing features, and their enormous diversity. Consequently, they are a poorly known component of Olympic National Park, despite their ecological and aesthetic importance. This project is the first attempt at a systematic, comprehensive survey of non-vascular cryptogams in the Park and presents the current species list with descriptions of the substrate and vascular vegetation type where they were observed. The authors strove to collect from as many park environments as feasible, and distributed collections along important environmental gradients in different regions of the park using vascular vegetation as an environmental indicator. They also collected opportunistically when interesting habitats or microhabitats were encountered. Finally, the authors updated the nomenclature in the Park’s previous collection of nonvascular plants. This study identified approximately 13,200 bryophyte and lichen species, adding approximately 425 new species to the Olympic National Park Herbarium. These data, combined with select literature reports and personal data from Martin and Karen Hutten, added more than 350 species to the previously documented Olympic Peninsula lichen and bryophyte list. The authors discuss the list in a local, regional, and global context of rarity, as well as cryptogam conservation and further work needed in Olympic National Park. The improved inventory of Olympic National Park cryptogams represented by this project enables Olympic National Park to protect populations of rare and sensitive species, assess the damage caused by illegal harvest, and contribute information to the Bureau of Land Management and U.S. Forest Service Sensitive Species Programs.

Scientific Investigations Report↗

Map showing general availability of ground water in the Kaiparowits coal-basin area, Utah

This is one of a series of maps that describe the geology and related natural resources in the Kaiparowits coal-basin area. This map is based partly on records of water wells, springs, and coal and petroleum exploration holes, partly on unpublished reports of field evaluations of prospective stock-water well sites by personnel of the U.S. Geological Survey, and partly on a 6-day field reconnaissance by the writer in parts of the mapped area. Most of the data used to compile this map were collected by the U.S. Geological Survey in cooperation with State, local, and other Federal agencies. Published sources of data included Phoenix (1963), Iorns, Hembree, and Phoenix (1964), Cooley (1965), Feltis (1966), Goode (1966, 1969), and the final environmental impact statement for the proposed Kaiparowits power project (U.S. Bureau of Land Management, 1976). Few data about the availability or depth of ground water could be obtained for large areas in the Kaiparowits coal basin. In those areas, expected yields of individual wells are inferred from the geology as compiled by Stokes (1964) and Hackman and Wyant (1973), and depths of ground water in wells are inferred largely from the local topography. El Paso Natural Gas Co., Resources Co., Kaiser Engineers, and Southern California Edison Co. provided specific information regarding the availability and depth of ground water in their exploratory holes on the Kaiparowits Plateau. The cooperation of those firms is gratefully acknowledged.

Utah↗

Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060

The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) is a long-term cooperative project designed to assess the quality of groundwater resources used for public and domestic drinking water supplies in the State of California, to monitor and evaluate changes to that quality, to investigate the human and natural factors controlling water quality, and to improve the availability of comprehensive groundwater quality data and information. Between May 18, 2004, and May 3, 2018, the GAMA-PBP collected 3001 groundwater samples for analysis of pesticide constituents by the U.S. Geological Survey (USGS) National Water Quality Laboratory (NWQL)(note that ‘pesticide constituents’ includes parent compounds and degradates). Of these samples, 2994 were analyzed for pesticide constituents on schedules 2003, 2032, or 2033 (65 to 84 constituents), and 840 were analyzed for pesticide constituents on schedule 2060 (58 constituents). The original dataset reported by the NWQL to the USGS National Water Information System (NWIS) database contained a total of 2,688 detections of 78 pesticide constituents and 253,825 non-detections. In this original dataset, 33 percent of the 3,001 samples analyzed had reported detections of one or more pesticide constituents. This report describes the GAMA-PBP data-quality objectives for pesticide data, the procedures used to establish study reporting limits, and use of those reporting limits to censor the data from the NWQL so that the final data published by the GAMA-PBP meet these data-quality objectives. The final GAMA-PBP dataset for samples collected from May 2004 to May 2018, after censoring, had a total of 1,632 detections of 37 pesticide constituents. In the final GAMA-PBP dataset, 25 percent of the 3,001 samples analyzed had detections of one or more pesticide constituents. The presence of pesticides in groundwater is commonly evaluated by calculating detection frequencies. Detection frequencies for pesticides are sensitive to detection limits and method performance for concentrations near those limits; therefore, the two primary data quality issues addressed in the GAMA-PBP data-quality objectives for pesticides are (1) establishing criteria for classifying data from the laboratory as detections or non-detections for the purpose of data reporting by the project and (2) accounting for changes in analytical methods or method performance over time. The GAMA-PBP addresses these issues by developing study reporting limits that are used as the boundary between detections and non-detections for the reporting of GAMA-PBP results. These reporting limits are defined from method detection limits (MDLs) provided by the NWQL, unless examination of results from laboratory set blanks (LSBs) and GAMA-PBP field blanks indicates that a higher concentration censoring limit is warranted. The GAMA-PBP selected the MDL as the primary choice for defining study reporting limits for consistency with U.S. Environmental Protection Agency (EPA) guidelines for reporting detections of pesticides and other organic constituents. A five-step procedure is used to develop study reporting limits and censor the GAMA-PBP dataset accordingly. The effect of the censoring at each step is described to provide information about the relative effect of each step on the overall censoring of the dataset. Steps 1 and 2 can be implemented at the time the data are received, whereas steps 3−5 require information accumulated over an extended period. Step 1: Reject results that were most likely the result of specific contamination instances attributable to unusual field or laboratory conditions during sample collection or processing. Two such instances were identified, leading to rejection of 25 detections, which were assigned a data-quality indicator code of “Q” for “reviewed and rejected” in the NWIS database. Step 2: Use the NWQL MDLs in effect at the time each sample was analyzed as the reporting limit. A total of 506 detections were censored on this basis. Step 3: Use the maximum MDL established by the NWQL during July 2004–August 2018 (MDLmax) as the reporting limit. The rationale for using the MDLmax as the reporting limit is based primarily on the observation that the concentrations of MDLs generally increased over time. A total of 438 detections were censored on this basis. Step 4: Use the LSBs to identify periods of greater potential laboratory contamination bias and define raised reporting limits to be used during those periods. These periods were defined by using a moving average detection frequency approach. For consistency with the NWQL procedures for defining raised reporting limits on the basis of detections in LSBs, the raised reporting limits were defined as equal to three times the highest concentration measured in an LSB during the period. A total of 25 detections in groundwater samples analyzed during periods of increased laboratory contamination bias were censored. Step 5: Use the LSBs and field blanks to identify potential contamination bias from field or laboratory processes outside of the time periods identified in step 4. The NWQL protocols were used to define the MDLs from blanks analyzed outside of the periods identified in step 4. If an MDL defined from blanks was greater than the MDLmax, the MDL defined from blanks was used to censor the data. One constituent had a study reporting limit defined on this basis, and a total of 62 detections in groundwater samples were censored. As of 2019, the USGS NWIS database does not have the capability to store both the original value reported by the NWQL and the final value published by the GAMA-PBP that reflects application of the quality-control censoring described in this report. In the interim, while this capability is developed, the 1,031 results censored in steps 2−5 are blocked from public release in NWIS, and the GAMA-PBP has published the original and final values in a USGS data release accompanying this report. The entire GAMA-PBP final dataset for pesticide constituents on schedules 2003, 2032, or 2033, or on schedule 2060 is publicly available in that USGS data release, through the USGS GAMA-PBP public web portal, and through the California State Water Resources Control Board GAMA public groundwater information system.

California↗

Final Report for Emergency Stabilization and Rehabilitation Treatment Monitoring of the Keeney Pass, Cow Hollow, Double Mountain, and Farewell Bend Fires

A strategy for monitoring post-fire seedings in the sagebrush steppe of the Intermountain West was developed and used to monitor four example fires in the Vale, Oregon District of the Bureau of Land Management (BLM). We began to develop a potential approach by (1) reviewing previous vegetation monitoring manuals produced by the Federal government to determine what techniques and approaches had been approved for use, and (2) monitoring a set of example fire rehabilitation projects from 2006 through 2008. We reviewed seven vegetation monitoring manuals approved for use by the Federal government. From these seven manuals, we derived a set of design elements appropriate for monitoring post-fire rehabilitation and stabilization projects. These design elements consisted of objectives, stratification, control plots, random sampling, data quality, and statistical analysis. Additionally, we chose three quantitative vegetation field procedures that were objective and repeatable to be used in conjunction with these six design elements. During the spring and summer of 2006 to 2008, U.S. Geological Survey personnel monitored vegetation in seven post-fire seeding treatments in four burned areas in the Vale district of the BLM in eastern Oregon. Treatments monitored included a native and non-native seeding in each of the Farewell Bend, Double Mountain, and Keeney Pass fires, and a native seeding at the Cow Hollow fire. All fires occurred in 2005. There generally was a low level of plant establishment for all seedings by 2008. The quantitative objective established by the BLM was to achieve 5 seeded grass plants/m2 by the end of 3 years as a result of the seeding. There was an estimated 3.97 and 6.28 plants/m2 in 2006 and 1.06 and 0.85 plants/m2 seeded perennial grasses in 2008 from the Keeney Pass non-native and native seeding, respectively. The Cow Hollow seeding resulted in the lowest establishment of perennial seeded grasses of the four project areas with 0.69 plants/m2 in 2006 and 0.09 plants/m2 in 2008. Density of seeded perennial grasses at the Double Mountain non-native and native seeding were 2.72 and 3.86 plants/m2 in 2006 and 0.90 and 1.74 plants/m2 in 2008, respectively. The Farewell Bend non-native seeding resulted in 5.62 plants/m2 in 2006 and 0.42 plants/m2 in 2008 while the native seeding had 2.22 seeded grass plants/m2 in 2006 and 0.44 plants/m2 by 2008. The primary reason for low level of establishment on most treatments except the Cow Hollow seeding was most likely the unfavorable timing and amount of precipitation in 2007 and 2008. Measurements of density within the first 3 years provide the best estimate of initial seeding success. Increases in cover due to the seedings were not detectable in the first 3 years following seeding in this monitoring effort. Changes in cover resulting from the treatments may be detectable in cases where the seedings were very successful in the first 3 years following seeding, but in areas with lower annual average precipitation, may not occur consistently. As a result, cover of seeded species may not be a good indication of seeding success in the early years after treatment. However, cover is useful for monitoring initial patterns of abundance of naturally recovering vegetation, exotic annual grasses and forbs, and bare ground. Cover measurements at these four sites revealed patterns common to most of the treatment areas in cover of litter, bare ground, and exotic annuals in response to drill seeding and weather patterns. There was a rapid increase in litter at all treatments after the fire. Additionally, there was less litter in treatment plots than in the control plots in 2006 probably due to the mechanical action of the seed drill. There also was a corresponding decrease in bare ground from 2006 to 2008. Initially, higher bare ground cover at treatment plots appears to be due to the mechanical action of the seed drill. Cover of annual grasses, primarily Bromus tectorum,

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A satellite model of Southwestern Willow Flycatcher ( Empidonax traillii extimus ) breeding habitat and a simulation of potential effects of tamarisk leaf beetles ( Diorhabda spp.), southwestern United States

Executive Summary The study described in this report represents the first time that a satellite model has been used to identify potential Southwestern Willow Flycatcher ( Empidonax traillii extimus ) (hereinafter referred to as “flycatcher”) breeding habitat rangewide for 2013–15. Fifty-seven Landsat scenes were required to map the entire range of the flycatcher, encompassing parts of six States and more than 1 billion 30-meter pixels. Predicted flycatcher habitat was summarized in a hierarchical fashion from largest to smallest: regionwide, State, U.S. Fish and Wildlife Service (FWS) management unit, 7.5-minute quadrangle, and critical-habitat reach. The term “predicted habitat” is used throughout this report to distinguish areas the satellite model predicts as suitable flycatcher habitat from what may actually exist on the ground. A rangewide accuracy assessment was done with 758 territories collected in 2014, and change detection was done with yearly habitat maps to identify how and where habitat changed over time. Additionally, effects of tamarisk leaf beetles ( Diorhabda spp.) on flycatcher habitat were summarized for the lower Virgin River from 2010 to 2015, and simulations of how tamarisk leaf beetles may affect flycatcher habitat in the lower Colorado and upper Gila Rivers were done for 2015. Model results indicated that the largest areas of predicted flycatcher habitat at elevations below 1,524 meters were in New Mexico and Arizona, areas followed in descending order by California, Texas, Nevada, Utah, and Colorado. By FWS management unit, the largest area of flycatcher habitat during all 3 years were the Middle Rio Grande (New Mexico), followed by the Upper Gila (Arizona and New Mexico) and Middle Gila/San Pedro (Arizona) management units. The area of predicted flycatcher habitat varied considerably in 7.5-minute quadrangles, ranging from 0 to1,398 hectares (ha). Averaged across 3 years, the top three producing quadrangles were Paraje Well (New Mexico), San Marcial (New Mexico), and San Carlos Reservoir (Arizona). The top three FWS critical-habitat reaches in 2015 were Rio Grande-middle (9,544 ha), San Pedro River (1,779 ha), and Gila River-mid San Carlos (1,356 ha); this ranking did not change in 2013 or 2014. Change detection among years showed a large shift in predicted flycatcher habitat influenced by drought patterns, with California habitat decreasing and New Mexico habitat increasing. An accuracy assessment indicated that 88 percent of territories were correctly classified at a 40 percent probability threshold, with an exponential relationship between territory densities and five probability classes. A spatially explicit analysis indicated that beetles decreased predicted flycatcher habitat 94.2 percent from 2010 to 2015 along the lower Virgin River, with only 5.8 percent persisting. In contrast, beetle simulations indicated that 64.1 percent of habitat will persist along the lower Colorado River and 45 percent will persist along the upper Gila River. This project shows that the satellite model adequately predicts flycatcher habitat rangewide, but it lacks the ability to predict which patches will be occupied in a given year. The next logical step is the development of an occupancy model that ties the habitat predictions of the satellite model to patch occupancy so managers can better allocate their resources for survey and restoration activities. Finally, the methods presented in this report seem well suited for automated mapping applications and cloud-based resources.

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The Ecology of Parasite-Host Interactions at Montezuma Well National Monument, Arizona - Appreciating the Importance of Parasites

Although parasites play important ecological roles through the direct interactions they have with their hosts, historically that fact has been underappreciated. Today, scientists have a growing appreciation of the scope of such impacts. Parasites have been reported to dominate food webs, alter predator-prey relationships, act as ecosystem engineers, and alter community structure. In spite of this growing awareness in the scientific community, parasites are still often neglected in the consideration of the management and conservation of resources and ecosystems. Given that at least half of the organisms on earth are probably parasitic, it should be evident that the ecological functions of parasites warrant greater attention. In this report, we explore different aspects of parasite-host relationships found at a desert spring pond within Montezuma Well National Monument, Arizona. In three separate but related chapters, we explore interactions between a novel amphipod host and two parasites. First, we identify how host behavior responds to this association and how this association affects interactions with both invertebrate non-host predators and a vertebrate host predator. Second, we look at the human dimension, investigating how human recreation can indirectly affect patterns of disease by altering patterns of vertebrate host space use. Finally - because parasites and diseases are of increasing importance in the management of wildlife species, especially those that are imperiled or of management concern - the third chapter argues that research would benefit from increased attention to the statistical analysis of wildlife disease studies. This report also explores issues of statistical parasitology, providing information that may better inform those designing research projects and analyzing data from studies of wildlife disease. In investigating the nature of parasite-host interactions, the role that relationships play in ecological communities, and how human activities alter these associations, scientists usually make inferences by methods of statistical hypotheses testing. This type of hypothesis testing places additional importance on the analysis and interpretation of parasite-host interactions. We address these ideas in this report, focusing on the following questions: (1) How do two parasites with complex life cycles alter the behavior of a novel amphipod host, and how do host and non-host predators respond to infected amphipod prey? (2) Does human recreation affect spatial patterns of infection in an otherwise natural ecosystem? (3) How is hypothesis-testing applied in studies of wildlife disease? (4) What conclusions can we make about the relative usefulness of these methodologies? and (5) How can the analysis and interpretation of wildlife disease studies be improved? Each chapter of this report contains its own literature-cited section, with tables included in appendixes at the end of the full report.

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