SEARCH · Geology Reports

Results for “Environmental Biology of Fishes”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 127 records · Page 7Linked to original sources

USGS2003

Variation in habitat use by juvenile Acadian redfish, Sebastes fasciatus

A basic paradigm in behavioral ecology is that organisms expand their distribution as preferred sites become saturated with individuals that reduce the availability of resources (e.g., shelter, prey) on a per capita basis. Previous fish community studies at Stellwagen Bank National Marine Sanctuary have shown that juvenile Acadian redfish Sebastes fasciatus (<20 cm total length; TL) were primarily associated with boulder reefs that have deep interstices amongst the boulders; and that redfish expanded their distribution to adjacent gravel habitats when local abundance on reefs was high. Multibeam and sidescan sonar surveys in Stellwagen Basin (primarily a cohesive mud seafloor) have shown that discrete small areas of the basin floor are composed of mud draped gravel and partially buried boulders. Linear video transects using remotely operated vehicles and a video/photographic equipped grab sampler across five of these sites in 1997 showed that exposed boulders do not have crevices along their lower margins and are surrounded by dense patches of cerianthid anemones, Cerianthus borealis. These anemone patches are not present on the surrounding mud seafloor. Video image data showed that late juvenile redfish (11-20 cm TL) occurred on boulder reefs as well as in the dense cerianthid patches but not on unstructured mud habitat (without cerianthid anemones). Comparisons of boulder reef and cerianthid habitats in 1998 showed that early demersal phase (0-year) redfish (0-10 cm TL) occurred only on reefs but late juveniles occurred both on the reefs and in dense cerianthid habitats. Adult size classes (>20 cm TL) also occurred in dense cerianthid habitats. Two explanations for these distributions can be advanced. The simplest is that redfish use both boulder and cerianthid habitats on an encounter basis, regardless of habitat saturation or predation pressure. Alternatively, boulder reefs serve as recruitment habitats and cerianthid habitats serve as a conduit for redfish moving away from saturated boulder reef sites, essentially serving as elements of a 'redfish pump'.

Gulf of Maine, Stellwagen Basin↗

USGS2002

Ontogenetic behavior and migration of Volga River Russian sturgeon, Acipenser gueldenstaedtii, with a note on adaptive significance of body color

We conducted laboratory experiments with Volga River Russian sturgeon, Acipenser gueldenstaedtii, to develop a conceptual model of early behavior. We daily observed fish from day-0 (embryos, first life interval after hatching) to day-29 feeding larvae for preference of bright habitat and cover, swimming distance above the bottom, up- and downstream movement, and diel activity. Hatchling embryos initiated a downstream migration, which suggests that predation risk of embryos at spawning sites is high. Migration peaked on days 0-5 and ceased on day 7 (8-day migration). Migrants preferred bright, open habitat and early migrants swam-up far above the bottom (maximum daily median, 140 cm) in a vertical swim tube. Post-migrant embryos did not prefer bright illumination but continued to prefer white substrate, increased use of cover habitat, and swam on the bottom. Larvae initiated feeding on day 10 after 170.6 cumulative temperature degree-days. Larvae did not migrate, weakly preferred bright illumination, preferred white substrate and open habitat, and swam near the bottom (daily median 5-78 cm). The lack of a strong preference by larvae for bright illumination suggests foraging relies more on olfaction than vision for locating prey. A short migration by embryos would disperse wild sturgeon from a spawning area, but larvae did not migrate, so a second later migration by juveniles disperses young sturgeon to the sea (2-step migration). Embryo and larva body color was light tan and tail color was black. The migration, behavior, and light body color of Russian sturgeon embryos was similar to species of Acipenser and Scaphirhynchus in North America and to Acipenser in Asia that migrate after hatching as embryos. The similarity in migration style and body color among species with diverse phylogenies likely reflects convergence for common adaptations across biogeographic regions. ?? 2002 Kluwer Academic Publishers.

Environmental Biology of Fishes↗

USGS2010

Using spatial, seasonal, and diel drift patterns of larval Lost River suckers Deltistes luxatus (Cypriniformes: Catostomidae) and shortnose suckers Chasmistes brevirostris (Cypriniformes: Catostomidae) to help identify a site for a water withdrawal structure on the Williamson River, Oregon

A small irrigation diversion dam near Chiloquin, Oregon, was removed and replaced with a pump station to improve fish passage for Lost River suckers (Deltistes luxatus) and shortnose suckers (Chasmistes brevirostris) entering the Sprague River on their spawning migrations. During the developmental phase of the pump station, a need was identified to better understand the larval drift characteristics of these endangered catostomids in order to reduce entrainment into the irrigation system. The spatial, seasonal, and diel distribution of drifting larvae was measured during the 2004 spawning season at two proposed sites on the Williamson River where the pump station could be located. Larval drift for both species coincided with the irrigation season making them subject to entrainment into the irrigation system. Drift occurred almost exclusively at night with larvae entering the drift at sunset and exiting the drift at sunrise. Nighttime larval densities were concentrated near the surface and at midchannel at both sites. Densities were generally greater on the side of mid-channel with greater flow. During early morning sampling we detected a general shift in larval drift from surface to subsurface drift. We also observed an increase in larval densities towards the shore opposite from the proposed pump station at the upper site whereas larval densities remained high at midchannel at the lower site. During daytime sampling, the few larvae that were collected were distributed throughout the water column at both pump sites. This study found that larvae drifting during all time periods were generally distributed further across the cross section, deeper in the water column, and closer to where the proposed water withdrawal structure would be built at the downstream site when compared to the upstream site. Recommendations were provided to locate the withdrawal facility at the upstream site and operate it in a manner such that larval entrainment would likely be minimized.

Oregon↗

USGS2024

Smallmouth buffalo (Ictiobus bubalus Rafinesque) population trends and demographics in the Upper Mississippi River System

Smallmouth buffalo ( Ictiobus bubalus Rafinesque) are a large-bodied fish highly valued and commercially exploited across most of their range. Despite this, relatively little is known of their population demographics compared to other exploited species. To fill these knowledge gaps, we analyzed two independent long-term datasets (30 and 57 years, respectively) and population demographic data (age structure, growth, mortality, age at maturity, and recruitment) from multiple pools of the Upper Mississippi River System (UMRS) and Illinois River (Illinois, USA). Long-term data (30-year dataset) generally show downward trends or significant declines in catch per unit effort in the UMRS, while the 57-year dataset shows a stable trend or a significant increase in the Illinois River. The oldest smallmouth buffalo were estimated to be 39 years old, with nearly every pool sampled having individuals estimated to exceed 30 years of age. Except for Pool 13 of the UMRS, 90% of smallmouth buffalo were estimated to mature between 411 and 470 mm in length or between 8.7 and 11.2 years old. Recruitment was variable: strong year classes were generally preceded by multiple years of weak year classes. Our results indicate that the smallmouth buffalo population may be stable in portions of the UMRS and Illinois River systems, but significant declines in the northern extent of the UMRS may warrant conservation concern. Recent research into ages of buffalofishes shows that consideration should be given to the idea that the UMRS population could be age truncated. Results also emphasize the importance of long-term data and the ability to show changes in exploited populations over time.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗

USGS1985

Effects of ration size on preferred temperature of lake charr Salvelinus namaycush

I tested the effects of different ration sizes on preferred temperatures of yearling lake charr, Salvelinus namaycush , by feeding them for about 2 weeks on one of four rations and then allowing them to thermoregulate in a temporal thermal gradient for 2 to 3 days. Selected temperatures and ration were directly and linearly correlated: the larger the ration, the higher the temperature selected. Mean preferred temperatures at different rations (shown in parentheses as percent of body weight per day) were as follows: 9.2°C (0.3); 10.6°C (0.8); 11.7°C (2.0); and 12.6°C (5.5). While the shift to lower temperature, under restricted ration, would maximize food conversion efficiency, previous growth studies indicate that even lower selected temperature would have been more beneficial.

Environmental Biology of Fishes↗

USGS1987

Effect of differential gastric evacuation and multispecies prey items on estimates of daily energy intake in juvenile Chinook salmon

The caloric density of stomach contents in juvenile chinook salmon, Oncorhynchus tshawytscha , was not affected by gastric evacuation, suggesting a constant caloric density of stomach contents during evacuation. Differences in the caloric density of prey consumed did affect caloric density of stomach contents over a 24-h period. Consumption of the amphipod Corophium sp. was associated with reduced caloric densities of stomach contents. During periods when Corophium contributed more than 4% of the stomach contents, average caloric density declined from 5.56 to 5.33 kcal g −1 . Despite this difference, estimates of daily energy intake of juvenile chinook salmon were only 3%, greater when developed from the mean caloric density of stomach contents excluding Corophium .

Environmental Biology of Fishes↗

USGS1994

Vulnerability to predation and physiological stress responses of experimentally descaled juvenile Chinook salmon, Oncorhynchus tshawytscha

Juvenile salmonids, Oncorhynchus spp., commonly encounter conditions (e.g., during hatchery release and dam passage) that result in damage to the skin, scale, and slime complex. We conducted laboratory experiments to determine if descaling of juvenile chinook salmon, O. tshawytscha , increased their vulnerability to predation, and to assess the physiological stress responses elicited by descaling. Salmon were experimentally descaled on either 10% or 20% of their total body area. When offered equal numbers of control and descaled juvenile chinook salmon, northern squawfish, Ptychocheilus oregonensis , did not consume significantly more of either prey type (48–60% of consumed prey were descaled). Juvenile chinook salmon descaled on 10% of their body area did show significant physiological stress responses, however. Mean concentrations of plasma cortisol peaked 1 h after descaling, and returned to control levels by 12 h. Plasma glucose peaked 3 h post-treatment and remained elevated for 24 h. Plasma lactate increased immediately following treatment and returned to undisturbed control levels by 3 h. The osmoregulatory response of plasma potassium was highly variable, but plasma sodium decreased immediately and remained low for 24 h. The observed physiological responses suggest that descaling of juvenile chinook salmon could result in decreased resistance to disease and other stressors encountered in the field, possibly leading to reduced performance capacity and lowered survival.

Environmental Biology of Fishes↗

USGS1993

Effect of four fluctuating temperature regimes on cui-ui Chasmistes cujus survival from egg fertilization to swim-up and size of larvae produced

We evaluated cui-ui, Chasmistes cujus , swim-up success, time of hatching and swim-up, and size of larvae at swim-up under four fluctuating temperature regimes (8.9–15.0, 12.2–18.3, 15.0–21.1, and 17.8–23.9° C). The greatest swim-up success was at the 8.9–15.0° C regime and the lowest at the 15.0–21.1° C regime. Hatching and swim-up time varied inversely with incubation temperature. The largest (and presumably the most fit) larvae were in the 8.9–15.0° C treatment, whereas the smallest were in the 17.8–23.9° C treatment. Cui-ui appeared best adapted to the coolest of the four temperature regimes.

Environmental Biology of Fishes↗

USGS2005

Vulnerability of young white sturgeon, Acipenser transmontanus, to predation in the presence of alternative prey

We conducted laboratory trials to test the vulnerability of young white sturgeon, Acipenser transmontanus, to predation when an alternative prey was available. In trials with two species of predators, we observed two feeding patterns. When equal numbers of white sturgeon and goldfish, Carassius auratus, were available, prickly sculpins, Cottus asper, ingested more white sturgeon. Conversely, northern pikeminnow, Ptychocheilus oregonensis, ate more juvenile coho salmon, Oncorhynchus kisutch, than white sturgeon in three out of four sets of trials, but ate more white sturgeon in one set of trials. White sturgeon size and the availability of cover did not affect the proportions of prey species ingested. Our results indicate that predation may be affecting survival of white sturgeon larvae and juveniles in the wild and could be one factor limiting recruitment of young-of-the-year white sturgeon in some locations. ?? Springer 2005.

Environmental Biology of Fishes↗

USGS2006

Population status of North American green sturgeon, Acipenser medirostris

North American green sturgeon, Acipenser medirostris, was petitioned for listing under the Endangered Species Act (ESA). The two questions that need to be answered when considering an ESA listing are; (1) Is the entity a species under the ESA and if so (2) is the "species" in danger of extinction or likely to become an endangered species in the foreseeable future throughout all or a significant portion of its range? Green sturgeon genetic analyses showed strong differentiation between northern and southern populations, and therefore, the species was divided into Northern and Southern Distinct Population Segments (DPSs). The Northern DPS includes populations in the Rogue, Klamath-Trinity, and Eel rivers, while the Southern DPS only includes a single population in the Sacramento River. The principal risk factors for green sturgeon include loss of spawning habitat, harvest, and entrainment. The Northern DPS is not considered to be in danger of extinction or likely to become an endangered species in the foreseeable future. The loss of spawning habitat is not large enough to threaten this DPS, although the Eel River has been severely impacted by sedimentation due to poor land use practices and floods. The two main spawning populations in the Rogue and Klamath-Trinity rivers occupy separate basins reducing the potential for loss of the DPS through catastrophic events. Harvest has been substantially reduced and green sturgeon in this DPS do not face substantial entrainment loss. However there are significant concerns due to lack of information, flow and temperature issues, and habitat degradation. The Southern DPS is considered likely to become an endangered species in the foreseeable future. Green sturgeon in this DPS are concentrated into one spawning area outside of their natural habitat in the Sacramento River, making them vulnerable to catastrophic extinction. Green sturgeon spawning areas have been lost from the area above Shasta Dam on the Sacramento River and Oroville Dam on the Feather River. Entrainment of individuals into water diversion projects is an additional source of risk, and the large decline in numbers of green sturgeon entrained since 1986 causes additional concern. ?? 2006 Springer Science+Business Media B.V.

Environmental Biology of Fishes↗

USGS2006

Influence of dams and habitat condition on the distribution of redhorse (Moxostoma) species in the Grand River watershed, Ontario

Redhorse, Moxostoma spp., are considered to be negatively affected by dams although this assertion is untested for Canadian populations. One hundred and fifty-one sites in the Grand River watershed were sampled to identify factors influencing the distribution of redhorse species. Individual species of redhorse were captured from 3 to 32% of sites. The most widespread species were golden redhorse, M. erythrurum (30%) and greater redhorse, M. valenciennesi (32%), while river redhorse, M. carinatum, was only found along the lower Grand River. Redhorse were absent from the highly fragmented Speed River sub-watershed and upper reaches of the Conestogo River and the Grand River. Redhorse species richness was positively correlated to river fragment size and upstream drainage area. Generalized additive models (GAMs) were applied to evaluate the influence of river fragment length, connectivity and habitat on species distribution. Principal component analysis reduced habitat data to three axes representing: channel structure, substrate, and pool, riffle and run habitats (PC1); gradient and drainage area (PC2); and cover (PC3). GAMs indicate that PC2 was important for predicting black redhorse and greater redhorse site occupancy and PC1 was important for golden redhorse. River fragment length was important for predicting site occupancy for shorthead redhorse, but not other species. ?? 2006 Springer Science+Business Media, Inc.

Environmental Biology of Fishes↗

USGS2007

Lake trout demographics in relation to burbot and coregonine populations in the Algonquin Highlands, Ontario

The objective of the study was to test the hypothesis that lake trout populations change in relation to cisco, lake whitefish, round whitefish and burbot populations in lakes in the Algonquin Highlands region of Ontario. Lake trout population change is greatest where cisco and lake whitefish are present. Lake trout populations in lakes without either coregonine tend to have small adults and many juveniles. Where cisco or lake whitefish are present, adult lake trout are large, juvenile abundance is low, and the stock-recruit relationship appears to be uncoupled likely due to a larval bottleneck. Lake trout populations in these lakes may be sensitive to overfishing and recruitment failure. Lake trout populations do not appear to change in relation to round whitefish. There appears to be an indirect positive change on juvenile lake trout abundance through reductions in the density of benthic coregonines in the presence of large, hypolimnetic burbot. ?? 2007 Springer Science+Business Media B.V.

Environmental Biology of Fishes↗

USGS2009

Fine sediment affects on survival to emergence of robust redhorse

Robust redhorse (Moxostoma robustum) is a rare riverine sucker for which life history information is scarce. Spawning occurs over loose gravel substrate and eggs and larvae may be adversely affected by fine sediments among the gravel. A 2-year study was conducted to determine the threshold at which fine sediments are detrimental to successful egg incubation and larval emergence. Year 1 gravel treatments contained 0, 25, 50, and 75% fine sediments. Mean survival during Year 1 ranged from 63.5% in the 0% fine sediment treatment to 0% in the 75% fine sediment treatment. The results also indicated an adverse affect threshold between 0 and 25% fine sediment. Year 2 gravel treatments contained 0, 5, 10, 15, 20, and 25% fine sediments. Mean survival during Year 2 ranged from 69.8% in the 0% treatment to 9.1% in the 25% treatment. Year 2 results also identified the 15% fine sediment treatment as the threshold at which survival began to decline. Substrates at one known spawning area used by robust redhorse typically contain 25 to 50% fine sediment, but the spawning act cleans some fines from the egg pocket. Whether the "cleaning" that results from the spawning act reduces the fines sufficiently to avoid adverse effects is unknown. According to our results, survival rates of robust redhorse eggs and larvae are predicted to be about 8.0% or less when fine sediment is >25%. ?? US Government 2009.

Environmental Biology of Fishes↗

USGS2010

Utility of mesohabitat features for determining habitat associations of subadult sharks in Georgia’s estuaries

We examined the affects of selected water quality variables on the presence of subadult sharks in six of nine Georgia estuaries. During 231 longline sets, we captured 415 individuals representing nine species. Atlantic sharpnose shark ( Rhizoprionodon terranovae ), bonnethead ( Sphyrna tiburo ), blacktip shark ( Carcharhinus limbatus ) and sandbar shark ( C. plumbeus ) comprised 96.1% of the catch. Canonical correlation analysis (CCA) was used to assess environmental influences on the assemblage of the four common species. Results of the CCA indicated Bonnethead Shark and Sandbar Shark were correlated with each other and with a subset of environmental variables. When the species occurred singly, depth was the defining environmental variable; whereas, when the two co-occurred, dissolved oxygen and salinity were the defining variables. Discriminant analyses (DA) were used to assess environmental influences on individual species. Results of the discriminant analyses supported the general CCA findings that the presence of bonnethead and sandbar shark were the only two species that correlated with environmental variables. In addition to depth and dissolved oxygen, turbidity influenced the presence of sandbar shark. The presence of bonnethead shark was influenced primarily by salinity and turbidity. Significant relationships existed for both the CCA and DA analyses; however, environmental variables accounted for <16% of the total variation in each. Compared to the environmental variables we measured, macrohabitat features (e.g., substrate type), prey availability, and susceptibility to predation may have stronger influences on the presence and distribution of subadult shark species among sites.

Georgia↗

USGS2010

A method of mounting multiple otoliths for beam-based microchemical analyses

Beam-based analytical methods are widely used to measure the concentrations of elements and isotopes in otoliths. These methods usually require that otoliths be individually mounted and prepared to properly expose the desired growth region to the analytical beam. Most analytical instruments, such as LA-ICPMS and ion and electron microprobes, have sample holders that will accept only one to six slides or mounts at a time. We describe a method of mounting otoliths that allows for easy transfer of many otoliths to a single mount after they have been prepared. Such an approach increases the number of otoliths that can be analyzed in a single session by reducing the need open the sample chamber to exchange slides-a particularly time consuming step on instruments that operate under vacuum. For ion and electron microprobes, the method also greatly reduces the number of slides that must be coated with an electrical conductor prior to analysis. In this method, a narrow strip of cover glass is first glued at one end to a standard microscope slide. The otolith is then mounted in thermoplastic resin on the opposite, free end of the strip. The otolith can then be ground and flipped, if needed, by reheating the mounting medium. After otolith preparation is complete, the cover glass is cut with a scribe to free the otolith and up to 20 small otoliths can be arranged on a single petrographic slide. ?? 2010 The Author(s).

Environmental Biology of Fishes↗

USGS2010

Use of cover habitat by bull trout, Salvelinus confluentus, and lake trout, Salvelinus namaycush, in a laboratory environment

Lacustrine-adfluvial bull trout, Salvelinus confluentus , migrate from spawning and rearing streams to lacustrine environments as early as age 0. Within lacustrine environments, cover habitat provides refuge from potential predators and is a resource that is competed for if limiting. Competitive interactions between bull trout and other species could result in bull trout being displaced from cover habitat, and bull trout may lack evolutionary adaptations to compete with introduced species, such as lake trout, Salvelinus namaycush . A laboratory experiment was performed to examine habitat use and interactions for cover by juvenile (i.e., <80 mm total length) bull trout and lake trout. Differences were observed between bull trout and lake trout in the proportion of time using cover ( F 1,22.6 = 20.08, P < 0.001) and bottom ( F 1,23.7 = 37.01, P < 0.001) habitat, with bull trout using cover and bottom habitats more than lake trout. Habitat selection ratios indicated that bull trout avoided water column habitat in the presence of lake trout and that lake trout avoided bottom habitat. Intraspecific and interspecific agonistic interactions were infrequent, but approximately 10 times greater for intraspecific interactions between lake trout. Results from this study provide little evidence that juvenile bull trout and lake trout compete for cover, and that species-specific differences in habitat use and selection likely result in habitat partitioning between these species.

Environmental Biology of Fishes↗

USGS2011

Selection and preference of benthic habitat by small and large Ammocoetes of the Least Brook Lamprey (Lampetra aepyptera)

In this laboratory study, we quantified substrate selection by small (<50 mm) and large (100–150 mm) ammocoetes of the least brook lamprey ( Lampetra aepyptera ). In aquaria, ammocoetes were given a choice to burrow into six equally-available substrate types: small gravel (2.360–4.750 mm), coarse sand (0.500–1.400 mm), fine sand (0.125–0.500 mm), organic substrate (approximately 70% decomposing leaves/stems and organic sediment particles, and 30% silt and fine sand), an even mixture of silt, clay, and fine sand, and silt/clay (<0.063 mm). Fine sand was selected with a significantly higher probability than any other substrate. Fine sand habitat is limited in many streams, in part owing to geology, but also as a result of channelization and excessive silt/clay sedimentation, which is a conservation concern. Our results indicate that ammocoetes of least brook lampreys are habitat specialists that prefer fine sand habitat. Hence, availability of fine sand habitat may limit distributions and population sizes.

Environmental Biology of Fishes↗

USGS2011

Significant genetic differentiation between native and introduced silver carp (Hypophthalmichthys molitrix) inferred from mtDNA analysis

Silver carp Hypophthalmichthys molitrix (Cyprinidae) is native to China and has been introduced to over 80 countries. The extent of genetic diversity in introduced silver carp and the genetic divergence between introduced and native populations remain largely unknown. In this study, 241 silver carp sampled from three major native rivers and two non-native rivers (Mississippi River and Danube River) were analyzed using nucleotide sequences of mitochondrial COI gene and D-loop region. A total of 73 haplotypes were observed, with no haplotype found common to all the five populations and eight haplotypes shared by two to four populations. As compared with introduced populations, all native populations possess both higher haplotype diversity and higher nucleotide diversity, presumably a result of the founder effect. Significant genetic differentiation was revealed between native and introduced populations as well as among five sampled populations, suggesting strong selection pressures might have occurred in introduced populations. Collectively, this study not only provides baseline information for sustainable use of silver carp in their native country (i.e., China), but also offers first-hand genetic data for the control of silver carp in countries (e.g., the United States) where they are considered invasive.

Environmental Biology of Fishes↗