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At least 1,243 records · Page 69Linked to original sources

USGS2020

Integrating side-scan sonar and acoustic telemetry to estimate the annual spawning run size of Atlantic sturgeon in the Hudson River

There is considerable interest in evaluating the status and trends of sturgeon populations, yet many traditional approaches to estimating the abundance of fishes are intractable due to their biology and rarity. Side-scan sonar has recently emerged as an effective tool for censusing sturgeon in rivers, yet challenges remain for censusing open populations that may visit specific habitats over periods of time (e.g., spawning runs). We use a hierarchical model to integrate side-scan sonar with acoustic telemetry, to estimate the proportion of a spawning run fitted with acoustic tags (12%; 95% CRI = 8-16%) and extrapolate to the total run size in 2014. Our investigation represents a novel approach to generating run size estimates in a large river and provides the first estimate of Atlantic sturgeon spawning run size for the Hudson River (N ̂ = 466; 95% CRI = 310-745) since the fishery moratorium in the 1990’s. Our estimate suggests that the Hudson River holds one of the largest contemporary populations of Atlantic sturgeon, but also indicates that it remains sharply depleted relative to virgin conditions.

Hudson River↗

USGS2021

The genetic composition of wild recruits in a recovering lake trout population in Lake Michigan

Strain performance evaluations are vital for developing successful fishery management and restoration strategies. Here, we utilized genotypes from 36 microsatellites to investigate hatchery strain contribution to collections of naturally produced lake trout ( Salvelinus namaycush ) sampled across Lake Michigan. Strain composition varied by area, with recoveries of Seneca Lake strain exceeding expectations based on stocking records in northern Lake Michigan but performing similarly to other strains in southern Lake Michigan. Interstrain hybrids were present at moderate frequencies similar to expectations based on simulations, suggesting that strains are interbreeding randomly. We hypothesize that the superior performance of the Seneca Lake strain in northern Lake Michigan is partially due to adaptive advantages that facilitate increased survival in areas with high mortality from sea lamprey ( Petromyzon marinus ) predation, such as northern Lake Michigan. However, when this selective pressure is lessened, the Seneca Lake strain performs similarly to other strains. Our study demonstrates that strain performance can vary across small spatial scales and illustrates the importance of conducting thorough strain evaluations to inform management and conservation.

Lake Michigan↗

USGS2022

Conflicts among protected native birds and valuable sport fishes: Potential pelican predation effects

Reservoirs are examples of novel ecosystems that have developed into popular sport fisheries; these systems are also becoming seasonal refuges for migratory birds, including the piscivorous American white pelican ( Pelecanus erythrorhynchos ). We (1) investigated the proportion of cutthroat trout ( Oncorhynchus clarkii utah ) and other species consumed by pelicans, (2) compared whether pelicans have an adverse effect on cutthroat trout spawning movement, and (3) determined the importance of pelican predation relative to other sources of fish mortality in Strawberry Reservoir, Utah, USA. Pelican diet samples consisted of >85% Utah sucker ( Catostomus ardens ), 6% Utah chub ( Gila atraria ), and 3% cutthroat trout. Based on bioenergetics, we estimated that pelicans consumed 384–3020 individual cutthroat trout (0.17%–1.3% of population), in contrast to 14 166–27 196 nongame sucker and chub. Bird-related mortality rate ranged from 1% to 6% for stocked, PIT (passive integrated transponder)-tagged adult cutthroat trout and from 4% to 16% for subadult cutthroat trout. Based on these results, any management action taken to control pelican predation would need to be weighed against the benefits of nongame fish removal and the protected status of pelicans.

Utah↗

USGS2022

First juvenile Chum Salmon confirms successful reproduction for Pacific salmon in the North American Arctic

The distributional extent of Pacific salmon Oncorhynchus spp. in the North American Arctic is unresolved. While adult Pacific salmon have a recurring presence across the Alaskan North Slope and into the Canadian Arctic, it is uncertain if these fish are part of established Arctic populations, vagrants from outside sources reproducing unsuccessfully, or both. Here we present the first confirmed record of a juvenile Chum Salmon O. keta captured in the nearshore marine ecosystem in the North American Arctic. This provides the first scientific evidence of successful spawning and early marine survival of Pacific salmon in the North American Arctic. It was caught near Kaktovik, Alaska in August 2017 with a group of similarly sized age-0 Mackenzie River Arctic Cisco Coregonus autumnalis . Stable isotope and otolith microchemistry analyses are consistent with use of the nearshore estuarine corridor from the Mackenzie River west along the northern coast. This contributes critical information needed to identify, manage, and conserve biodiversity at the northern range edge, and will help to clarify the status of Pacific salmon as potentially emerging fisheries develop in the North American Arctic due to climate warming.

Alaska↗

USGS2023

Using continuous surveys to evaluate precision and bias of inferences from design-based reach-scale sampling of stream habitat

Accurately estimating stream characteristics is essential for managing and restoring populations and aquatic ecosystems. Reach-based sampling designs have been used extensively to collect fisheries related data; however, few studies have examined the effectiveness of reach-based sampling designs for stream habitat assessments. Here, we used continuous habitat surveys to census stream attributes in tributaries in the upper Lewis River, WA and better understand the potential bias and precision of reach-based designs. We used resampling analyses via bootstrapping to create simulated outcomes of different sampling designs including simple random with equal probability, simple random with unequal probability, and a generalized random tessellation stratified design (GRTS). We found precision of estimates of habitat attributes (large woody debris, residual pool depth, and grain size) increased with sampling intensity; however, the effort needed to achieve reasonable precision (CV = 0.20) varied across streams, attributes, and designs. Bias was relatively low, but also varied across streams and attributes. Our findings illustrate the challenges of using reach-based designs for stream habitat assessments and the need for novel approaches for broader data collection.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2023

Connecting habitat to species abundance: The role of light and temperature on the abundance of walleye in lakes

Walleye ( Sander vitreus) are an ecologically important species managed for recreational, tribal, and commercial harvest. Walleye prefer cool water and low light conditions, and therefore changing water temperature and clarity potentially impacts walleye habitat and populations across the landscape. Using survey data collected from 1993 to 2018 from 312 lakes in Minnesota, we evaluated the relationship between thermal-optical habitat and the relative abundance of small (0–300 mm), medium (300–450 mm), and large (450 + mm) walleye. Thermal-optical habitat was positively correlated with the relative abundance of small and medium walleye but not large walleye. Walleye were more abundant in larger, naturally reproducing lakes opposed to smaller, stocked lakes. Thermal-optical habitat changed in 59% of lakes since 1980 (26% increasing and 33% decreasing) and appears to be driven primarily by changes in water clarity and thus optical habitat area. Our study provides important insights into local and regional drivers that influence walleye populations that can be used to assist fisheries managers in setting population goals and managing harvest.

Minnesota↗

USGS2023

Drought related changes in water quality surpass effects of experimental flows on trout growth downstream of Lake Powell reservoir

Flows released from reservoirs are often modified to mitigate the negative ecosystem effects of dams. We estimated the effects of two experimental flows, fall-timed floods and elimination of sub-daily variation in flows on weekends, on growth rates of rainbow trout (Oncorhynchus mykiss) in the Colorado River downstream from Glen Canyon Dam. Experimental flow effects were compared to effects of water temperature, phosphorous concentration, solar insolation, and competition, by fitting mixed effect von Bertalanffy models to ~ 10,000 observations of growth from mark-recapture between 2012 and 2021. There was strong support for models predicting faster growth during intervals with higher solar insolation, and lower water temperature and competition for prey. Effects of phosphorus and experimental flows were small and uncertain. Drought-related increases in dam release temperatures during summer and fall were predicted to result in severe weight loss for larger trout and could eventually threaten the viability of the population and the fishery it supports. The effects of water temperature and competition on fish growth substantially exceeded the effects of controlled floods and steadier flows.

Arizona, Utah↗

USGS2024

Multi-decadal trophic shifts in Lake Erie yellow perch Perca flavescens

In Lake Erie, yellow perch Perca flavescens support vast commercial and recreational fisheries, yet populations have recently declined. Using N = 5889 yellow perch stomachs collected from 1997 to 2021, we explored trends in the feeding ecology and trophic level of yellow perch with generalized additive models. Models revealed a significant decrease in yellow perch trophic level (−0.15 trophic levels in the last decade), and significant dietary shifts. Yellow perch have shifted away from feeding on piscine prey and round goby Neogobius melanostomus over the 25-year period, and now feed on invertebrates more frequently—including invasive waterfleas ( Bythotrephes longimanus and Cercopagis pengoi ) and chironomids. Dietary patterns appear to reflect broad ecological changes—invasive waterfleas have proliferated while populations of forage fish and round goby have declined. Furthermore, hypoxia events have increased in duration and severity, which may explain observed increases in chironomid consumption, which are hypoxia tolerant. This study demonstrates trophic adaptability in yellow perch, which have changed feeding behavior and trophic position in response to novel invaders and changing environmental conditions.

Lake Erie↗

USGS2024

Evolutionary perspectives on thiamine supplementation of managed Pacific salmonid populations

Thiamine deficiency complex (TDC) has been identified in an ever-expanding list of species and populations. In many documented occurrences of TDC in fishes, juvenile mortality can be high—up to 90% at the population level. Such sweeping demographic losses and concomitant decreases in genetic diversity due to TDC can be prevented by treating pre-spawn females or fertilized eggs with supplemental thiamine. However, some fisheries managers are hesitant to widely apply thiamine treatments due to the potential for unforeseen evolutionary consequences. With these concerns in mind, we first review the existing data regarding genetic adaptation to low-thiamine conditions and provide perspectives on evolution-informed treatment strategies with specific population examples. We also provide practical treatment information, consider the potential logistical constraints of thiamine supplementation, and explore the consequences of deciding against supplementation. Until new evidence bolsters or refutes the genetic adaptation hypothesis, we suggest that TDC mitigation strategies should be designed to support maximum population genetic diversity through thiamine supplementation.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2025

Integrating acoustic telemetry research into management: successes and challenges in the Laurentian Great Lakes

In the Laurentian Great Lakes, the application of acoustic telemetry to track fish movements has evolved into an important part of multijurisdictional management. Nevertheless, barriers remain in translating telemetry research into management or conservation actions. Here, we synthesize acoustic telemetry literature within the Great Lakes basin to explore factors that have contributed to successes and failures of integrating research with the needs of decision-making processes. Collaboration between researchers and managers, facilitated by consistent opportunities for stakeholder engagement, stood out as one of the most effective means of integration. For example, 79% (95 of 127) of articles published (up to 2023) included co-authorship by both government and academic organizations. Case studies on lake sturgeon ( Acipenser fulvescens ), walleye ( Sander vitreus ), and sea lamprey ( Petromyzon marinus ) further highlight how telemetry has informed management through collaborative engagement among researchers, stakeholders, and managers, as well as ongoing challenges. By exploring facets of acoustic telemetry research and connections to conservation and fisheries concerns, we identify pathways to reduce knowledge–action gaps widely applicable within and outside of the Great Lakes.

Laurentian Great Lakes↗

USGS2000

Using linear models with correlated errors to analyze changes in abundance of Lake Michigan fishes: 1973-1992

We examined annual changes in relative abundance of Lake Michigan fishes using linear models with correlated errors in space and time. Abundance of bloater ( Coregonus hoyi ), deepwater sculpin ( Myoxocephalus thompsoni ), slimy sculpin ( Cottus cognatus ), alewife ( Alosa pseudoharengus ), and rainbow smelt ( Osmerus mordax ) was monitored with bottom trawls at 10 discrete depths (between 18 and 110 m) off eight fixed ports from 1973 to 1992. The model describing abundance included fixed effects of year, port, depth, and interaction terms as well as quadratic and cubic effects of year and depth because changes in abundance were not strictly linear. Observed temporal trends in abundance varied with species and depth. Additionally, trends in alewife and slimy sculpin abundances depended on port. Cubic trends in the abundance of bloater and quadratic trends in deepwater sculpin and rainbow smelt abundances were similar among ports, permitting lakewide inferences for these species. Mean bloater abundance was low throughout the 1970s, increased during the 1980s, and reached high levels by 1990. Mean abundances of deepwater sculpin and rainbow smelt increased from 1973 to the mid-1980s and declined thereafter. The linear model with correlated errors can be readily applied to repeated-measures data from other fixed-station fishery surveys and is appropriate for data exhibiting spatial and temporal autocorrelations.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2003

Lake Ontario: Food web dynamics in a changing ecosystem (1970-2000)

We examined stressors that have led to profound ecological changes in the Lake Ontario ecosystem and its fish community since 1970. The most notable changes have been reductions in phosphorus loading, invasion by Dreissena spp., fisheries management through stocking of exotic salmonids and control of sea lamprey ( Petromyzon marinus ), and fish harvest by anglers and double-crested cormorants ( Phalacrocorax auritus ). The response to these stressors has led to ( i ) declines in both algal photosynthesis and epilimnetic zooplankton production, ( ii ) decreases in alewife ( Alosa pseudoharengus ) abundance, ( iii ) declines in native Diporeia and lake whitefish ( Coregonus clupeaformis ), ( iv ) behavioral shifts in alewife spatial distribution benefitting native lake trout ( Salvelinus namaycush ), threespine stickleback ( Gasterosteus aculeatus ), and emerald shiner ( Notropis atherinoides ) populations, ( v ) dramatic increases in water clarity, ( vi ) predation impacts by cormorants on select fish species, and ( vii ) lake trout recruitment bottlenecks associated with alewife-induced thiamine deficiency. We expect stressor responses associated with anthropogenic forces like exotic species invasions and global climate warming to continue to impact the Lake Ontario ecosystem in the future and recommend continuous long-term ecological studies to enhance scientific understanding and management of this important resource.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2008

Annual variation in habitat-specific recruitment success: Implications from an individual-based model of Lake Michigan alewife (Alosa pseudoharengus)

The identification of important spawning and nursery habitats for fish stocks can aid fisheries management, but is complicated by various factors, including annual variation in recruitment success. The alewife (Alosa pseudoharengus) is an ecologically important species in Lake Michigan that utilizes a variety of habitats for spawning and early life growth. While productive, warm tributary mouths (connected to Lake Michigan) may contribute disproportionately more recruits (relative to their habitat volume) to the adult alewife population than cooler, less productive nearshore habitats, the extent of interannual variation in the relative contributions of recruits from these two habitat types remains unknown. We used an individual-based bioenergetics simulation model and input data on daily temperatures to estimate alewife recruitment to the adult population by these different habitat types. Simulations suggest that nearshore lake habitats typically produce the vast majority of young alewife recruits. However, tributary habitats may contribute the majority of alewife recruits during years of low recruitment. We suggest that high interannual variation in the relative importance of habitats for recruitment is a common phenomenon, which should be considered when developing habitat management plans for fish populations. ?? 2008 NRC.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2008

Forage fish of the Pacific Rim as revealed by diet of a piscivorous seabird: Synchrony and relationships with sea surface temperature

We tested the hypothesis of synchronous interannual changes in forage fish dynamics around the North Pacific Rim. To do this, we sampled forage fish communities using a seabird predator, the rhinoceros auklet ( Cerorhinca monocerata ), at six coastal study sites from Japan to California. We investigated whether take of forage fishes was related to local marine conditions as indexed by sea surface temperature (SST). SST was concordant across sites in the eastern Pacific, but inversely correlated between east and west. Forage fish communities consisted of anchovy ( Engraulis spp.), sandlance ( Ammodytes spp.), capelin ( Mallotus spp.), and juvenile rockfish ( Sebastes spp.), among others, and take of forage fish varied in response to interannual and possibly lower-frequency oceanographic variability. Take of primary forage species were significantly related to changes in SST only at the eastern sites. We found synchrony in interannual variation of primary forage fishes across several regions in the eastern Pacific, but no significant east–west correlations. Specifically in the Japan Sea, factors other than local SST or interannual variability may more strongly influence forage fishes. Predator diet sampling offers a fishery-independent, large-scale perspective on forage fish dynamics that may be difficult to obtain using conventional means of study.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2009

Elemental signatures in otoliths of hatchery rainbow trout (Oncorhynchus mykiss): Distinctiveness and utility fo detecting origins and movement

Otolith chemistry in freshwater has considerable potential to reveal patterns of origin and movement, which would benefit traditional fisheries management and provide a valuable tool to curb the spread of invasive and illicitly stocked species. We evaluated the relationship between otolith and water chemistry for five markers (Ba/Ca, Mn/Ca, Sr/ Ca, Zn/Ca, and 87 Sr/ 86 Sr) in rainbow trout (Oncorhynchus mykiss) using the existing hatchery system in Colorado and Wyoming, USA, to provide controlled, seminatural conditions. Otolith Ba/Ca, Sr/Ca, and 87 Sr/ 86 Sr reflected ambient levels, whereas Mn/Ca and Zn/Ca did not. Using only the markers correlated with water chemistry, we classified fish to their hatchery of origin with up to 96% accuracy when element and isotope data were used together. Large changes in 87Sr/ Sr were evident in otolith transects, although subtler changes in Sr/Ca were also detectable. Our results suggest the relatively few otolith markers that reflect ambient chemistry can discriminate among locations and track movements well enough to provide valuable insight in a variety of applied contexts.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2012

Semi-discrete biomass dynamic modeling: an improved approach for assessing fish stock responses to pulsed harvest events

Continuous harvest over an annual period is a common assumption of continuous biomass dynamics models (CBDMs); however, fish are frequently harvested in a discrete manner. We developed semidiscrete biomass dynamics models (SDBDMs) that allow discrete harvest events and evaluated differences between CBDMs and SDBDMs using an equilibrium yield analysis with varying levels of fishing mortality ( F ). Equilibrium fishery yields for CBDMs and SDBDMS were similar at low fishing mortalities and diverged as F approached and exceeded maximum sustained yield ( F MSY ). Discrete harvest resulted in lower equilibrium yields at high levels of F relative to continuous harvest. The effect of applying harvest continuously when it was in fact discrete was evaluated by fitting CBDMs and SDBDMs to time series data generated from a hypothetical fish stock undergoing discrete harvest and evaluating parameter estimates bias. Violating the assumption of continuous harvest resulted in biased parameter estimates for CBDM while SDBDM parameter estimates were unbiased. Biased parameter estimates resulted in biased biological reference points derived from CBDMs. Semidiscrete BDMs outperformed continuous BDMs and should be used when harvest is discrete, when the time and magnitude of harvest are known, and when F is greater than F MSY .

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS1962

The relative efficiency of nylon and cotton gill nets for taking lake trout in Lake Superior

The change from cotton to nylon twine for gill nets in 1949–52 resulted in a sharp increase in the efficiency of the most important gear used for taking lake trout in Lake Superior, and, consequently, biased estimates of fishing intensity and abundance severely.From early May to the end of September 1961, short gangs (2000 or 4000 linear feet) of cotton and nylon nets were fished in parallel sets for lake trout. A total of 343,000 feet of gill netting was lifted. Nylon nets were 2.25 times as efficient as cotton nets for taking legal-sized fish and 2.8 times as efficient for undersized lake trout. The average lengths of legal, undersized, and all lake trout taken in nets of the two materials did not differ greatly. The percentage of the catch which was undersized (less than 1.25&ensp;lb, dressed weight) was 20.8 in nylon nets and 17.7 in cotton. The relative efficiency of cotton and nylon nets showed no trend during the season. The efficiency ratio determined in this study was closely similar to that obtained by earlier workers.Correction of estimates of fishing intensity and abundance for the greater efficiency of the nylon nets used since 1951 has not been attempted. The drastic decline of the lake trout fishery has forced fishermen to make changes in fishing practices in the past few years that cause new bias of an unknown extent to estimates of fishing intensity.

Journal of the Fisheries Research Board of Canada↗

USGS1971

Plotting of bathythermograph transect data on a printer

A program for plotting bathythermograph transect data on a computer (IBM 1130) printer is available from the Great Lakes Fishery Laboratory. Temperature values are printed in positions proportional to their depths and distances from shore. Contour lines are drawn manually through the plotted points.

Journal of the Fisheries Research Board of Canada↗