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USGS2012

Selecting sagebrush seed sources for restoration in a variable climate: ecophysiological variation among genotypes

Big sagebrush ( Artemisia tridentata ) communities dominate a large fraction of the United States and provide critical habitat for a number of wildlife species of concern. Loss of big sagebrush due to fire followed by poor restoration success continues to reduce ecological potential of this ecosystem type, particularly in the Great Basin. Choice of appropriate seed sources for restoration efforts is currently unguided due to knowledge gaps on genetic variation and local adaptation as they relate to a changing landscape. We are assessing ecophysiological responses of big sagebrush to climate variation, comparing plants that germinated from ~20 geographically distinct populations of each of the three subspecies of big sagebrush. Seedlings were previously planted into common gardens by US Forest Service collaborators Drs. B. Richardson and N. Shaw, (USFS Rocky Mountain Research Station, Provo, Utah and Boise, Idaho) as part of the Great Basin Native Plant Selection and Increase Project. Seed sources spanned all states in the conterminous Western United States. Germination, establishment, growth and ecophysiological responses are being linked to genomics and foliar palatability. New information is being produced to aid choice of appropriate seed sources by Bureau of Land Management and USFS field offices when they are planning seed acquisitions for emergency post-fire rehabilitation projects while considering climate variability and wildlife needs.

Report↗

USGS2008

Using an ecological ethics framework to make decisions about the relocation of wildlife

Relocation is an increasingly prominent conservation tool for a variety of wildlife, but the technique also is controversial, even among conservation practitioners. An organized framework for addressing the moral dilemmas often accompanying conservation actions such as relocation has been lacking. Ecological ethics may provide such a framework and appears to be an important step forward in aiding ecological researchers and biodiversity managers to make difficult moral choices. A specific application of this framework can make the reasoning process more transparent and give more emphasis to the strong sentiments about non-human organisms held by many potential users. Providing an example of the application of the framework may also increase the appeal of the reasoning process to ecological researchers and biodiversity managers. Relocation as a conservation action can be accompanied by a variety of moral dilemmas that reflect the interconnection of values, ethical positions, and conservation decisions. A model that is designed to address moral dilemmas arising from relocation of humans provides/demonstrates/illustrates a possible way to apply the ecological ethics framework and to involve practicing conservationists in the overall decision-making process. ?? 2008 Springer Science+Business Media B.V.

Science and Engineering Ethics↗

USGS2018

Integrating authentic scientific research in a conservation course–based undergraduate research experience

Course-based undergraduate research experiences (CUREs) have been developed to overcome barriers including students in research. However, there are few examples of CUREs that take place in a conservation and natural resource context with students engaging in field research. Here, we highlight the development of a conservation-focused CURE integrated to a research program, research benefits, student self-assessment of learning, and perception of the CURE. With the additional data, researchers were able to refine species distribution models and facilitate management decisions. Most students reported gains in their scientific skills, felt they had engaged in meaningful, real-world research. In student reflections on how this experience helped clarify their professional intentions, many reported being more likely to enroll in graduate programs and seek employment related to science. Also interesting was all students reported being more likely to talk with friends, family, or the public about wildlife conservation issues after participating, indicating that courses like this can have effects beyond the classroom, empowering students to be advocates and translators of science. Field-based, conservation-focused CUREs can create meaningful conservation and natural resource experiences with authentic scientific teaching practices.

Natural Sciences Education↗

USGS2016

Proceedings of the 12th Biennial Conference of research on the Colorado Plateau

Introduction The Colorado Plateau is a physiographic region that encompasses 330,000 square kilometers in parts of four states in the southwestern United States (Colorado, Utah, New Mexico, and Arizona). Known for its high deserts, the Colorado Plateau also includes isolated mountains, high plateaus, and rugged canyons. Not only is the region topographically diverse, but geologically, biologically, and culturally diverse as well. The landscape is managed by Federal entities including the Bureau of Land Management, the National Park Service, and the U.S. Forest Service; Tribal nations including the Navajo Nation, Kaibab Paiute, Mountain Ute, Southern Ute, Hopi, Zuni, Hualapai, Havasupai, and White Mountain Apache Tribes; State land and wildlife management agencies; and privately owned holdings, creating complex interactions and management challenges. Population growth, increased tourism to Federal and State lands, and energy development have increased water demands and altered land-use patterns, and these changes have emerged as management challenges facing the people working and living in the region. Climate change, particularly the ongoing drought, has exacerbated the effects of population growth, land-use change, and other stressors such as invasive species. As managers seek solutions to the challenges facing the region’s natural and cultural resources, the Biennial Conference of Science and Management of the Colorado Plateau has become an important venue for exchanging information about emerging management concerns and recent scientific research. Each biennial conference has sought to promote discussion, information sharing, and productive communication among the managers, scientists, students, administrators, tribal representatives, and others who attend the conference with the goal of enhancing the use of the best available science to manage the region’s incomparable natural and cultural resources. The publication and dissemination of a conference proceedings series expands the reach of the conference beyond those people in attendance and creates a record on the research presented. The idea of producing a conference proceedings, and its subsequent publication, first occurred in 1993 following the first biennial conference in 1991. A published volume of contributed papers has followed each subsequent biennial conference, including this volume. The venue for publishing proceedings has changed over the years and has included the National Park Service, the Government Printing Office, the U.S. Geological Survey, and University of Arizona Press. Recently, van Riper and others (2015) published a compilation of the abstracts from the 11 previous conference proceedings. Collectively, the proceedings highlight approximately 25 years of natural- and cultural-resources research, promoting the integration of research with resource management across the Colorado Plateau. This volume is freely downloadable by the public, thereby further expanding the influence of this conference beyond the Colorado Plateau. The 12th Biennial Conference held in Flagstaff, Arizona, from September 16 to 19, 2013, covered a range of topics in the physical, biological, and socio-cultural sciences. The conference was organized and hosted by Northern Arizona University’s ( NAU) Merriam-Powell Center for Environmental Research, the Colorado Plateau Cooperative Ecosystem Studies Unit, and the U.S. Geological Survey Southwest Biological Science Center. Financial and in-kind support was provided by a wide range of organizations including the U.S. Forest Service, National Park Service, Bureau of Land Management, Grand Canyon Trust, Colorado Plateau Research Station, and various NAU entities. NAU sponsors include the Landscape Conservation Initiative, School of Forestry, School of Earth Science and Environmental Sustainability, Office of the Provost, and Office of the Vice President of Research. Contributors to these proceedings include researchers and managers from Federal, State, and Tribal governments, universities, private entities, and non-profit organizations. In this regard, this conference has wide-ranging support and participation among private and public entities involved in the science and management of natural resources on the Colorado Plateau.

Arizona, Colorado, New Mexico, Utah↗

USGS2012

Hood River PIT-tag interrogation system efficiency study. Annual report of U.S. Geological Survey activities: November 2010-October 2011

Introduction During summer 2010, an agreement was made between the US Geological SurveyColumbia River Research Laboratory (USGS-CRRL) and the Confederated Tribes of the Warm Springs (CTWS) to operate an experimental Passive Integrated Transponder (PIT)-tag interrogation system (PTIS) near the mouth of the Hood River for a year and provide fishdetection efficiency estimates (Bonneville Power Administration (BPA) project number 1988- 053-03, contract number 50150). A previous agreement between Oregon Department of Fish and Wildlife (ODFW) and USGS-CRRL had funded materials acquisition, construction, and installation of the PTIS (BPA project number 1988-053-04, contract number 48684). The primary purpose of the project was to test the efficacy of a PTIS in the lower Hood River for providing data on returning adult salmonids to the Hood River as part of the Hood River Production Monitor and Evaluation project (HRPME). Because PIT tags are small, relatively inexpensive, carry no internal battery, and last through the lifespan of most fishes, they are commonly used in long term fish monitoring projects. They have been extensively used in the Columbia River basin to monitor salmonid behavior and survival through life stages and migration routes in the mainstem Columbia River (Skalski et al. 1998; Zabel and Achord 2004). Increasingly, PIT-tag detection equipment has been deployed in streams to investigate salmonid behavior (Zydlewski et al. 2001, 2006; Riley et al. 2003; Bond et al. 2007). Most of the detection systems deployed and evaluated to date have been in much smaller streams than the mainstem of the Hood River (Zydlewski et al. 2001, 2006; Bond et al. 2007; Horton et al. 2007; Connolly et al. 2008), but researchers are attempting to expand detection abilities to larger streams and rivers. Large streams and rivers can prove extremely challenging to monitor. Some systems have showed promise for contributing valuable detection data, others have proved less successful. A detection system in the Klamath River (Beeman et al. 2012), a site similar in size to the Hood River, suffered problems from cables being dislodged and high water that resulted in a detection efficiency estimate for juvenile coho salmon of less than 0.05. An additional USGS-CRRL task, under contract number 50150, was to build three antennas for use with Destron-Fearing 2001F-ISO PIT tag readers. These antennas would be 5 used at the East Fork Hood River Acclimation site. They would be placed in the outflow channel to inform managers about the number of PIT tagged steelhead smolts released to the Hood River after a period of acclimation when some mortality and predation might occur.

Oregon↗

USGS2016

Monitoring and research on the Bi-State Distinct Population Segment of greater sage-grouse ( Centrocercus urophasianus ) in the Pine Nut Mountains, California and Nevada—Study progress report, 2011–15

The Bi-State distinct population segment (DPS) of greater sage-grouse ( Centrocercus urophasianus ) that occurs along the Nevada–California border was proposed for listing as threatened under the Endangered Species Act (ESA) by the U.S. Fish and Wildlife Service (FWS) in October 2013. However, in April 2015, the FWS determined that the Bi-State DPS no longer required protection under the ESA and withdrew the proposed rule to list the Bi-State DPS (U.S. Fish and Wildlife Service, 2015). The Bi-State DPS occupies portions of Alpine, Mono, and Inyo Counties in California, and Douglas, Esmeralda, Lyon, Carson City, and Mineral Counties in Nevada. Unique threats facing this population include geographic isolation, expansion of single-leaf pinyon ( Pinus monophylla ) and Utah juniper ( Juniperus osteosperma ), anthropogenic activities, and recent changes in predator communities. Estimating population vital rates, identifying seasonal habitat, quantifying threats, and identifying movement patterns are important first steps in developing effective sage-grouse management and conservation plans. During 2011–15, we radio- and Global Positioning System (GPS)-marked (2012–14 only) 44, 47, 17, 9, and 3 sage-grouse, respectively, for a total of 120, in the Pine Nut Mountains Population Management Unit (PMU). No change in lek attendance was detected at Mill Canyon (maximum=18 males) between 2011 and 2012; however, 1 male was observed in 2014 and no males were observed in 2013 and 2015. Males were observed near Bald Mountain in 2013, making it the first year this lek was observed to be active during the study period. Males were observed at a new site in the Buckskin Range in 2014 during trapping efforts and again observed during surveys in 2015. Findings indicate that pinyon-juniper is avoided by sage-grouse during every life stage. Nesting females selected increased sagebrush cover, sagebrush height, and understory horizontal cover, and brood-rearing females selected similar areas, but also preferred increased perennial forb abundance. Using maximum likelihood estimation, nest survival for the Pine Nut Mountains PMU during 2011–14 was 23.8 percent (95-percent confidence interval [CI]=0.3–40.6 percent) and appeared lower in comparison to the average 42 percent nest success for sage-grouse range-wide. Brood survival for 50-day brood-rearing phase in the Pine Nut Mountains PMU during 2011–14 was 53.8 percent (95-percent CI=30.0–73.4 percent). Adult survival during 2011–15 was 67.4 percent (95-percent CI=56.1–76.5 percent). During 2011–14, 696 raptor/raven surveys were completed and results indicate a greater number of raven detections ( n =464) in the Pine Nut Mountains PMU than at other study areas in Nevada. These data will be used to develop a predator index. We conducted a more minimal monitoring effort of sage-grouse populations during the 2015 field season, which included trapping efforts, general telemetry, brood monitoring, and GPS monitoring. Nest monitoring, microhabitat sampling, and raptor/raven surveys were not conducted in the 2015 season. Deployment of GPS transmitters has expanded our knowledge of movement corridors and fine-scale movement patterns by sage-grouse in the Pine Nut Mountains PMU. Movement corridors between seasonal habitats were identified with one sage-grouse traveling greater than 100 kilometers south to the Bodie Mountains in California for the winter season. The use of GPS technology to monitor movements in conjunction with intensive field efforts will be important in developing habitat models and maps for the Pine Nut Mountains PMU.

California, Nevada↗

USGS2017

Long‐term trends in fall age ratios of black brant

Accurate estimates of the age composition of populations can inform past reproductive success and future population trajectories. We examined fall age ratios (juveniles:total birds) of black brant ( Branta bernicla nigricans ; brant) staging at Izembek National Wildlife Refuge near the tip of the Alaska Peninsula, southwest Alaska, USA, 1963 to 2015. We also investigated variation in fall age ratios associated with sampling location, an index of flock size, survey effort, day of season, observer, survey platform (boat‐ or land‐based) and tide stage. We analyzed data using logistic regression models implemented in a Bayesian framework. Mean predicted fall age ratio controlling for survey effort, day of year, and temporal and spatial variation was 0.24 (95% CL = 0.23, 0.25). Overall trend in age ratios was −0.6% per year (95% CL = −1.3%, 0.2%), resulting in an approximate 26% decline in the proportion of juveniles over the study period. We found evidence for variation across a range of variables implying that juveniles are not randomly distributed in space and time within Izembek Lagoon. Age ratios varied by location within the study area and were highly variable among years. They decreased with the number of birds aged (an index of flock size) and increased throughout September before leveling off in early October and declining in late October. Age ratios were similar among tide stages and observers and were lower during boat‐based (offshore) than land‐based (nearshore) surveys. Our results indicate surveys should be conducted annually during early to mid‐October to ensure the entire population is present and available for sampling, and throughout Izembek Lagoon to account for spatiotemporal variation in age ratios. Sampling should include a wide range of flock sizes representative of their distribution and occur in flocks located near and off shore. Further research evaluating the cause of declining age ratios in the fall population is necessary to inform management and predict long‐term population dynamics of brant.

Alaska↗

USGS2016

Predictors of breeding site occupancy by amphibians in montane landscapes

Ecological relationships and processes vary across species’ geographic distributions, life stages and spatial, and temporal scales. Montane landscapes are characterized by low wetland densities, rugged topographies, and cold climates. Consequently, aquatic-dependent and low-vagility ectothermic species (e.g., pool-breeding amphibians) may exhibit unique ecological associations in montane landscapes. We evaluated the relative importance of breeding- and landscape-scale features associated with spotted salamander ( Ambystoma maculatum ) and wood frog ( Lithobates sylvaticus ) wetland occupancy in Maine's Upper Montane-Alpine Zone ecoregion, and we determined whether models performed better when the inclusive landscape-scale covariates were estimated with topography-weighted or circular buffers. We surveyed 135 potential breeding sites during May 2013–June 2014 and evaluated environmental relationships with multi-season implicit dynamics occupancy models. Breeding site occupancy by both species was influenced solely by breeding-scale habitat features. Spotted salamander occupancy probabilities increased with previous or current beaver ( Castor canadensis ) presence, and models generally were better supported when the inclusive landscape-scale covariates were estimated with topography-weighted rather than circular buffers. Wood frog occupancy probabilities increased with site area and percent shallows, but neither buffer type was better supported than the other. Model rank order and support varied between buffer types, but model inferences did not. Our results suggest pool-breeding amphibian conservation in montane Maine include measures to maintain beaver populations and large wetlands with proportionally large areas of shallows ≤1-m deep. Inconsistencies between our study and previous studies substantiate the value of region-specific research for augmenting species’ conservation management plans and suggest the application of out-of-region inferences may promote ineffective conservation.

Maine↗

USGS2022

Seed treatments containing neonicotinoids and fungicides reduce aquatic insect richness and abundance in midwestern USA–managed floodplain wetlands

Agrochemicals including neonicotinoid insecticides and fungicides are frequently applied as seed treatments on corn, soybeans, and other common row crops. Crops grown from pesticide-treated seed are often directly planted in managed floodplain wetlands and used as a soil disturbance or food resource for wildlife. We quantified invertebrate communities within mid-latitude floodplain wetlands and assessed their response to use of pesticide-treated seeds within the floodplain. We collected and tested aqueous and sediment samples for pesticides in addition to sampling aquatic invertebrates from 22 paired wetlands. Samples were collected twice in 2016 (spring [pre-water level drawdown] and autumn [post-water level flood-up]) followed by a third sampling period (spring 2017). Meanwhile, during the summer of 2016, a portion of study wetlands were planted with either pesticide-treated or untreated corn seed. Neonicotinoid toxic equivalencies (NI-EQs) for sediment ( X̅ = 0.58 μg/kg), water ( X̅ = 0.02 μg/L), and sediment fungicide concentrations ( X̅ = 0.10 μg/kg) were used to assess potential effects on wetland invertebrates. An overall decrease in aquatic insect richness and abundance was associated with greater NI-EQs in wetland water and sediments, as well as with sediment fungicide concentration. Post-treatment, treated wetlands displayed a decrease in insect taxa-richness and abundance before recovering by the spring of 2017. Information on timing and magnitude of aquatic insect declines will be useful when considering the use of seed treatments for wildlife management. More broadly, this study brings attention to how agriculture is used in wetland management and conservation planning.

Missouri↗

USGS2021

Oregon and Landsat

Oregon’s landscape is as complex and diverse as it is beautiful. Mountain peaks in the Cascade Range soar higher than 10,000 feet. Crater Lake sinks to a depth of 1,943 feet, making it the deepest lake in the United States. Oregon’s lands feature forests, farm fields, grasslands, ocean coastline, rivers, a semidesert, and mountain ranges that stretch across the State. A wide range of birds, animals, and fish—including 16 federally endangered species—share this space with more than 4 million people. With Oregon’s economy tied to these natural resources, industries like agriculture, timber, and fishing interlace with the well-being of wildlife and residents. Landsat data and imagery are one of many U.S. Geological Survey tools used by State resource managers and scientists to help achieve a natural balance and provide information about forests, habitats, and much more to Oregon decision makers. This will become even more important as research indicates climate change will make extreme weather more likely, leading to the likely increase in droughts, infestation, wildfires, and other natural hazards.

Oregon↗

USGS2005

A Science Framework for Connecticut River Watershed Sustainability

Introduction: This document outlines a research framework for water resource managers and land-use planners in the four-state Connecticut River Watershed (CRW). It specifically focuses on developing the decision-support tools and data needed by managers in the watershed. The purpose of the Science Framework is to identify critical research issues and information required to better equip managers to make decisions on desirable changes in the CRW. This Science Framework is the result of a cooperative project between the U.S. Geological Survey (USGS), the University of Massachusetts at Amherst (UMass-Amherst), and the U.S. Fish and Wildlife Service (FWS). The cooperative project was guided by a Science Steering Committee (SC) and included several focus groups, a 70-person workshop in September 2004, and an open collaborative process by which the workshop outcomes were synthesized, written up, and then progressively refined through peer review. This document is the product of that collaborative process.

Open-File Report↗

USGS2018

Landsat classification of surface-water presence during multiple years to assess response of playa wetlands to climatic variability across the Great Plains Landscape Conservation Cooperative region

To improve understanding of the distribution of ecologically important, ephemeral wetland habitats across the Great Plains, the occurrence and distribution of surface water in playa wetland complexes were documented for four different years across the Great Plains Landscape Conservation Cooperative (GPLCC) region. This information is important because it informs land and wildlife managers about the timing and location of habitat availability. Data with an accurate timestamp that indicate the presence of water, the percent of the area inundated with water, and the spatial distribution of playa wetlands with water are needed for a host of resource inventory, monitoring, and research applications. For example, the distribution of inundated wetlands forms the spatial pattern of available habitat for resident shorebirds and water birds, stop-over habitats for migratory birds, connectivity and clustering of wetland habitats, and surface waters that recharge the Ogallala aquifer; there is considerable variability in the distribution of playa wetlands holding water through time. Documentation of these spatially and temporally intricate processes, here, provides data required to assess connections between inundation and multiple environmental drivers, such as climate, land use, soil, and topography. Climate drivers are understood to interact with land cover, land use and soil attributes in determining the amount of water that flows overland into playa wetlands. Results indicated significant spatial variability represented by differences in the percent of playas inundated among States within the GPLCC. Further, analysis-of-variance comparison of differences in inundation between years showed significant differences in all cases. Although some connections with seasonal moisture patterns may be observed, the complex spatial-temporal gradients of precipitation, temperature, soils, and land use need to be combined as covariates in multivariate models to effectively account for these patterns. We demonstrate the feasibility of using classification of Landsat satellite imagery to describe playa-wetland inundation across years and seasons. Evaluating classifications representing only 4 years of imagery, we found significant year-to-year and state-to-state differences in inundation rates.

Great Plains Landscape Conservation Cooperative↗

USGS2019

Effects of air exposure on survival of Yellowstone Cutthroat Trout angled from a stream with warm water temperatures

We evaluated the effects of air exposure on Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri caught and released in a cold-water stream with elevated water temperatures (i.e., > 14°C) in southeastern Idaho. Anglers caught fish in a 2.3-km section of Fall Creek, Idaho, during August 2018. Sampled fish remained underwater while we measured and then tagged them with T-bar anchor tags. We exposed fish to air for 0, 30, or 60 s and then released them at the point of capture. We continuously monitored temperature during the study period. Water temperatures during the study varied from 10.0 to 19.7°C and averaged 14.9°C (SE = 0.08). In total, anglers caught 161 Yellowstone Cutthroat Trout over 10 d. Of those fish, we did not expose 54 to air; we exposed 54 to air for 30 s, and 53 for 60 s. We used electrofishing to recapture tagged fish and estimate relative survival. Relative survival was highest for fish exposed to air for 60 s (0.40 [SE = 0.25]) followed by 0 s (0.35 [SE = 0.25]) and 30 s (0.30 [SE = 0.27]), but differences were not statistically significant. Results from this study are consistent with other air-exposure studies suggesting that air exposure of 60 s or less is not likely a concern in Yellowstone Cutthroat Trout fisheries. Releasing fish as quickly as possible is always encouraged, but management regulations restricting air exposure seem unnecessary given the collective body of field-based research on air exposure. Nevertheless, similar studies on other systems and species are warranted.

Idaho↗

USGS2018

Waterbird habitat in California's Central Valley basins under climate, urbanization, and water management scenarios

California's Central Valley provides critical, but threatened habitat and food resources for migrating and wintering waterfowl, shorebirds, and other waterbirds. The Central Valley is comprised of nine basins that were defined by the Central Valley Joint Venture (CVJV) to assist in conservation planning. Basins vary in composition and extent of habitats, which primarily include croplands and wetlands that rely on water supplies shared with other competing human and environmental uses. Changes in climate, urban development, and water supply management are uncertain and could reduce future availability of water supplies supporting waterbird habitats and limit effectiveness of wetland restoration planned by the CVJV to support wintering waterbirds. We modeled 17 plausible scenarios including combinations of three climate projections, three urbanization rates, and five water supply management options to promote agricultural and urban water uses, with and without wetland restoration. Our research examines the reduction in quantity and quality of habitats during the fall migration-wintering period by basin under each scenario, and the efficacy of planned wetland restoration to compensate reductions in flooded areas of wetland habitats. Scenario combinations of projected climate, urbanization, and water supply management options reduced availability of flooded cropland and wetland habitats during fall-winter and degraded the quality of seasonal wetlands (i.e., summer-irrigation for improved forage production), though the extent and frequency of impacts varied by basin. Planned wetland restoration may substantially compensate for scenario-related effects on wetland habitats in each basin. However, results indicate that Colusa, Butte, Sutter, San Joaquin, and Tulare Basins may require additional conservation to support summer-irrigation of seasonal wetlands and winter-flooding of cropland habitats. Still further conservation may be required to provide sufficient areas of flooded seasonal and semi-permanent wetlands in San Joaquin and Tulare Basins during fall-winter. The main objective of this research is to provide decision-support for achieving waterbird conservation goals in the valley and to inform CVJV's regional conservation planning.

California↗

USGS1953

Lake fisheries need lamprey control and research

Since 1921, when the first sea lamprey was recorded from Lake Erie, concern about this parasite in the Great Lakes above Niagara Falls, where previously it had never occurred, grew successively. At first, the concern was shared only in scientific circles, but as the parasite continued its persistent and rapid spread throughout the upper Great Lakes this concern was voiced by state conservation departments, the U.S. Fish and Wildlife Service, and interested fishermen. Catches of lake trout especially, and other species secondarily, began to fall below anything representing normal fluctuations in abundance. The fishing industry on Lake Huron and Lake Michigan became extremely concerned due to the fact that income was diminishing greatly. Producers on Lake Superior were fearful that the same decline in production would soon characterize their fishery.

The Fisherman↗

USGS2023

Pardus in the press: Drivers of leopard (Panthera pardus fusca) attack occurrence on humans in Nepal

The negative impact of large carnivore presence in human-dominated landscapes manifests as livestock depredation and in extreme cases as attacks on humans. In the case of conflict with leopards in Nepal, attacks resulting in human fatality have become more frequent over time, thus creating an urgent socio-ecological and management issue. We estimated the occurrence of leopard attacks in Nepal from human-leopard conflict cases reported in the media. We used occupancy models to analyse data collected from online news reports on incidents of leopard attacks on humans to explore drivers of leopard attacks on a landscape scale. Our results suggest that the probability of occurrence of leopard attack is associated with human population density, terrain ruggedness and livestock density. The human population density effect may be indicative of a density-dependent relationship, where attacks are more likely in areas where an increased abundance of humans increases encounter rates with leopards. The positive effect of livestock density suggests that livestock may be drawing leopards into human settlements, and consequently increasing the likelihood of attacks on humans. Terrain ruggedness might be offering ideal conditions to facilitate attacks on humans, for example remoteness and high amounts of cover to launch ambush attacks. We provide inference and insights into key determinants of leopard attacks on humans on a landscape scale. These insights can be used to guide future research, inform mitigation measures to reduce leopard attacks and foster a better understanding of the interaction between people and leopards. This study demonstrates the applicability and novelty of using a hierarchical modelling framework applied to freely and publicly available media reports to inform the applied management of human-wildlife conflict at a national scale.

People and Nature↗

USGS2019

The presence of antibiotic resistance genes in coastal soil and sediment samples from the eastern seaboard of the USA

Infections from antibiotic resistant microorganisms are considered to be one of the greatest global public health challenges that result in huge annual economic losses. While genes that impart resistance to antibiotics (AbR) existed long before the discovery and use of antibiotics, anthropogenic uses of antibiotics in agriculture, domesticated animals, and humans are known to influence the prevalence of these genes in pathogenic microorganisms. It is critical to understand the role that natural and anthropogenic processes have on the occurrence and distribution of antibiotic resistance in microbial populations to minimize health risks associated with exposures. As part of this research, 15 antibiotic resistance genes were analyzed in coastal sediments and soils along the eastern seaboard of the USA using presence/absence quantitative and digital polymerase chain reaction assays. Samples (53 soil and 192 sediment samples including 54 replicates) were collected from a variety of coastal settings where human and wildlife exposure is likely. At least one of the antibiotic resistance genes was detected in 76.4% of the samples. Samples that contained at least five or more antibiotic resistance genes (5.7%) where typically hydrologically down gradient of watersheds influenced by combined sewer outfalls (CSO). The most frequently detected antibiotic resistance target genes were found in 33.2%, 34.4%, and 42.2% of samples (target genes bla SHV , tetO , and aadA2 , respectively). These data provide unique insight into potential exposure of AbR genes over a large geographical region of the eastern seaboard of the USA.

Connecticut, Delaware, District of Columbia, Maine↗

USGS2012

Science in support of the Deepwater Horizon response

This introduction to the Special Feature presents the context for science during the Deepwater Horizon oil spill response, summarizes how scientific knowledge was integrated across disciplines and statutory responsibilities, identifies areas where scientific information was accurate and where it was not, and considers lessons learned and recommendations for future research and response. Scientific information was integrated within and across federal and state agencies, with input from nongovernmental scientists, across a diverse portfolio of needs—stopping the flow of oil, estimating the amount of oil, capturing and recovering the oil, tracking and forecasting surface oil, protecting coastal and oceanic wildlife and habitat, managing fisheries, and protecting the safety of seafood. Disciplines involved included atmospheric, oceanographic, biogeochemical, ecological, health, biological, and chemical sciences, physics, geology, and mechanical and chemical engineering. Platforms ranged from satellites and planes to ships, buoys, gliders, and remotely operated vehicles to laboratories and computer simulations. The unprecedented response effort depended directly on intense and extensive scientific and engineering data, information, and advice. Many valuable lessons were learned that should be applied to future events.

Alabama, Florida, Louisiana, Mississippi, Texas↗