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Water-quality conditions with an emphasis on cyanobacteria and associated toxins and taste-and-odor compounds in the Kansas River, Kansas, July 2012 through September 2016

Cyanobacteria cause a multitude of water-quality concerns, including the potential to produce toxins and taste-and-odor compounds that may cause substantial economic and public health concerns, and are of particular interest in lakes, reservoirs, and rivers that are used for drinking-water supply. Extensive cyanobacterial blooms typically do not develop in the Kansas River; however, reservoirs in the lower Kansas River Basin occasionally develop blooms that may affect downstream water quality. During July 2012 through September 2016, continuous and (or) discrete water-quality data were collected at several sites (Wamego, De Soto, and three main reservoir-fed tributaries) on the Kansas River to characterize the sources, frequency and magnitude of occurrence, and causes of cyanobacteria, cyanobacterial toxins, and taste-and-odor compounds and to develop a real-time notification system of changing water-quality conditions that may affect drinking-water treatment. Algal biomass, as estimated by chlorophyll, was consistently higher at the downstream De Soto site than the upstream Wamego site. Higher algal biomass at the De Soto site likely was caused by algal growth during downstream transport without major losses due to grazing by aquatic organisms or other processes. Algal biomass at the Wamego and De Soto sites was negatively correlated with streamflow and total and bioavailable nutrient concentrations. The negative association between algal biomass and nutrients in the Kansas River likely reflects the relatively strong positive association between nutrient concentrations and streamflows. Cyanobacteria were relatively common in the Kansas River but rarely dominated the algal community. Like overall algal biomass, cyanobacterial abundances typically were higher at the De Soto site than the Wamego site. Cyanobacterial abundances generally peaked in late summer or early fall (July through October), with smaller peaks occasionally observed in spring (April through May). Cyanobacteria in the Kansas River rarely exceeded 20,000 cells per milliliter, the abundance at which cyanobacteria may become a concern for drinking-water treatment. Relations between cyanobacterial abundance and streamflow, turbidity, and nutrients in the Kansas River were similar to those between chlorophyll and total phytoplankton abundance, indicating the same processes that influence overall algal biomass and dynamics also are influencing cyanobacteria. The cyanotoxin microcystin was detected in about 27 percent of the samples collected from Kansas River tributary and main-stem sites. Cylindrospermopsin was detected in one sample from the De Soto site. Microcystin occurrence and concentration were similar between the Wamego and De Soto sites. Concentrations exceeded the U.S. Environmental Protection Agency health advisory guidance values for finished drinking water of 0.3 (for bottle-fed infants and pre-school children) and 1.6 micrograms per liter (μg/L; for school-age children and adults) in 6 percent or less of samples collected. These guidance values are for finished drinking water and are not directly applicable to observed environmental concentrations but do provide a benchmark for comparison. Microcystin was detected most often and had the highest concentrations during summer. Though seasonal patterns in microcystin occurrence were generally consistent, seasonal maxima varied by an order of magnitude across years. The taste-and-odor compounds geosmin and 2-methylisoborneol (MIB) were detected in about 78 and 43 percent of samples, respectively, collected across all sites (main stem and tributaries). Geosmin and MIB occurrence and concentration varied considerably between the Wamego and De Soto sites. Geosmin was detected in about 67 percent of Wamego samples and 81 percent of De Soto samples. The human detection threshold of 5 nanograms per liter (ng/L) was exceeded for geosmin in about 11 and 17 percent of the samples collected at the Wamego and De Soto sites, respectively. Geosmin was detected during all months of the year at both sites, and there were no clear seasonal patterns. MIB was detected less frequently in the Kansas River than geosmin and was observed in about 42 percent of Wamego samples and 33 percent of De Soto samples. Concentrations exceeded 5 ng/L in about 7 and 5 percent of samples from the Wamego and De Soto sites, respectively. As observed for geosmin, there were no clear seasonal patterns in MIB occurrence or concentration. There seems to be a connection between microcystin detections in the Kansas River and occurrence of microcystin in upstream reservoirs (and tributary streams). Microcystin concentrations greater than 0.3 μg/L may be likely during the summer when streamflow is less than 3,000 cubic feet per second (ft 3 /s) and contributions from Milford Lake exceed about 30 percent of total flow in the Kansas River. Observed microcystin concentrations typically were higher at the De Soto site than the Wamego or tributary sites during 2012 through 2016, indicating cyanobacteria may continue to grow and produce microcystin once introduced to the Kansas River. The spatial and temporal patterns in geosmin and MIB occurrence and concentration were more complex than microcystin. There were no clear connections between geosmin and MIB occurrence in the Kansas River and potential upstream reservoir (or tributary stream) sources. Likewise, there was not a clear relation between algal biomass, cyanobacteria, or actinomycetes bacteria and taste-and-odor events in the Kansas River. Geosmin and MIB were not strongly correlated with any measured environmental variable at either Kansas River site. Continuous water-quality data may be used independently or in combination with regression models to provide information on changing water-quality conditions that may affect drinking-water treatment processes or recreational activities on the Kansas River. For example, logistic regression model outputs and continuous water-quality data may both be indicative of the potential for microcystin events. Logistic regression models that are estimating a high probability of microcystin occurrence at concentrations above 0.1 μg/L can be used as one indicator. Streamflows less than 3,000 ft 3 /s during upstream reservoir releases during periods with low turbidity and increased chlorophyll fluorescence, specific conductance, and pH values may also be indicative of microcystin events. Advanced or near-real-time notification may inform proactive, rather than reactive, management strategies when water-quality conditions are changing rapidly or are likely to cause cyanobacteria-related events.

Kansas↗

Water-quality and aquatic-community characteristics of selected reaches of the St. Croix River, Minnesota and Wisconsin, 2000

Synoptic sampling was used to determine chemical and biological characteristics of the St. Croix River within a study reach that extended from near Danbury, Wisconsin to the confluence with the Mississippi River at Prescott, Wisconsin. The study was conducted August 7- September 25, 2000 during summer low flow. Dissolved-residue concentrations were found to increase gradually as the river flows downstream, with an abrupt increase downstream of the confluence with the Sunrise River that was primarily attributed to an increase in calcium and magnesium. Dissolved residue concentrations were further augmented by increased yields of chloride and sulfate in the part of the St. Croix Basin between Nevers Dam near St. Croix Falls, Wisconsin and Marine on St. Croix, Minnesota. Nearly all of the nitrogen in transport was in the form of nitrate and organic nitrogen. Organic nitrogen, mainly in particulate form, accounted for most of the gain in total nitrogen load within the study reach. Nitrogen loading to the mainstem indicated relatively uniform nitrogen inputs from the Clam River, Kettle River, and Snake River watersheds. The rate of nitrogen load accrual increased downstream of the confluence with the Sunrise River and in the subreach extending from Nevers Dam through St. Croix Falls to Franconia, Minnesota. Nitrogen load also increased, primarily because of nitrate input, in the part of Lake St. Croix downstream of the confluence with the Kinnickinnic River. Total phosphorus concentrations and loads reflected variations in the amount of particulate phosphorus in transport. Phosphorus loading increased in the part of the St. Croix River that includes Danbury and the confluences of the Yellow River and Clam River. Phosphorus loading also increased downstream of the confluence with the Sunrise River, but the greatest load increase occurred between Nevers Dam and Franconia. Phosphorus load decreased substantially as the river flowed through the pooled reach of Lake St. Croix downstream of Stillwater. Suspended-sediment concentrations were low, ranging from 4.0 to 36 milligrams per liter. The small amount of sediment in transport was reflected in turbidity measurements that ranged from 0.5 to 3.6 Nephelometry Turbidity Units, and transparency tube measurements that were greater than 60 centimeters at all sites. Biological measures of resource quality change in the St. Croix River along its course from Danbury to Prescott. Changes in the biological indicators of resource quality (fish and invertebrate community composition) are most notable just upstream and downstream of the dam at St. Croix Falls, Wisconsin. Aquatic communities in the upper St. Croix River, from near Danbury to near Rush City, Minnesota, indicate minimal physical and chemical disturbance as evidenced by relatively high taxa richness and greater proportions of taxa intolerant to physical and chemical disturbance. In contrast, aquatic communities downstream of the Sunrise River to Marine on St. Croix indicate both physical and chemical disturbance. Resource monitoring, consisting of short-term diagnostic studies, may be needed in parts of the St. Croix River mainstem and tributaries where results from this study indicate constituent loading is greatest and where the aquatic community composition indicates disturbance. Longer-term trend monitoring may be needed to detect physical, chemical and biological responses to natural processes and human activities in the St. Croix River Basin.

Minnesota, Wisconsin↗

Assessment of water quality and fecal contamination sources at Hook Pond, East Hampton, New York

Summary The U.S. Geological Survey, in cooperation with the Village of East Hampton, New York, conducted a 1-year study from August 2017 to August 2018 to provide data necessary to improve understanding of the sources of nutrients and pathogens to Hook Pond watershed to allow for possible mitigation or reduction of loads. Chronic eutrophication and recent concern over harmful cyanobacteria in Hook Pond are the result of past and present land uses and a changing climate that have prompted the Village of East Hampton and local businesses to study and remediate factors contributing to the persistent loading of nutrients, organic contaminants, and pathogens. This assessment of Hook Pond, Hook Pond Dreen, and shallow groundwater provides the most comprehensive set of water-quality data to date. Interpretations presented in this study and the data on which they are based can be used to support management decisions, inform and contribute to modeling, and serve as a baseline for future assessments. Results from continuous monitoring of water temperature, specific conductance, and elevation at Hook Pond site 10 (Maidstone Club golf cart bridge), as well as ancillary weather and tidal data from nearby stations, were used to help explain seasonal and storm-related concentration variation of nitrogen, phosphorus, wastewater-indicator compounds, and pathogens. Data collected were also compared to existing historical data. Physicochemical constituents measured on a routine basis throughout the pond and along the tributary showed the spatial variability in water temperature, specific conductance, dissolved oxygen, pH, turbidity, and chlorophyll a and phycocyanin fluorescence. A lakebed survey was compiled based on the year-round sampling throughout the pond for future comparisons. Water-quality data from shallow groundwater at points around Hook Pond and adjacent to Hook Pond Dreen were interpreted and quantified to estimate relative contributions and species of nutrients, wastewater-indicator compounds, and microbial source tracking (MST) markers to base flow. To supplement the continuous water-surface elevation data, a single set of discharge measurements was collected under normal (nonstorm) conditions to better understand the relative contributions and dilution of surface waters by contaminated groundwater. The nutrient and physicochemical data from this study can be used in conjunction with current and future models and decision support tools to guide planned and ongoing restoration efforts, such as dredging to reduce sediment accumulation, opening a pathway to the ocean (which would change the salinity and flow dynamics of the pond and adjacent groundwater), and addressing growing concerns over cyanobacterial blooms, while serving as a baseline for measuring changes resulting from sea-level rise, climate change, and changes in nutrient loading. The microbial source tracking and indicator bacteria results can help direct efforts to reduce runoff and direct contributions of fecal contamination from dogs and waterfowl along Hook Pond Dreen. The results can also be used to assess the current state of wastewater infrastructure surrounding and contributing to Hook Pond Dreen, based on detection of human markers throughout the year and with both Bacteroides and coliphage methods.

New York↗

Public acceptance of management actions and judgments of responsibility for the wolves of the southern Greater Yellowstone Area: Report to Grand Teton National Park

Introduction Wolves of Grand Teton National Park and the Greater Yellowstone Area Gray wolves (Canis lupus) appeared in Grand Teton National Park (GRTE) in October of 1998, two years after being reintroduced to Yellowstone National Park (YNP). Since that time, five packs have been within the GRTE borders - Gros Ventre Pack, Nez Perce Pack, Yellowstone Delta Pack, Teton Pack, and Green River Pack (Table 1). Wolves in the Greater Yellowstone Area are increasing and spreading out geographically (USFWS and others, 2004). This dispersion was demonstrated recently by the death of a 2-year-old female wolf from the Swan Lake pack on I-70 in Colorado (June 7, 2004; http://mountain-prairie.USFWS.gov/pressrel /04-43.htm). The organization of wolf packs in the GYA is dynamic and highly structured. In 2003, for example, a wolf from the Teton Pack joined with the Green River Pack, and several young wolves left the Teton Pack and moved south (USFWS and others, 2004). Pack size (averaging five to ten members) is dependent on hunting efficiency, which depends on prey size, type, and density. Each pack defends home ranges of several hundred square miles. The social structure of the pack is based on a breeding pair (an alpha male and female). Other wolves in the pack can be categorized as betas (males and/or females second in rank to the alphas), subordinates, pups, and occasional omegas (outcasts). Because generally only the alpha pair breeds, subordinate wolves of reproductive age must disperse from their packs and form new associations in order to breed. (http://www.nps.gov/grte/wolf/biolo.htm). The reintroduced wolves are classified by the U.S. Fish and Wildlife Service (USFWS) as "nonessential experimental" under section 10(j) of the Endangered Species Act. The recovery criteria for the GYA wolves were met in 2002 for removing the wolves from the Endangered Species List (30 or more breeding pairs). Currently, the USFWS manages wolf populations in the GYA until delisting occurs. After delisting, state Fish and Wildlife Services in Montana, Idaho, and Wyoming will be responsible for managing wolves. Each state must submit a wolf management plan to the USFWS which then must be approved before management shifts occur. As of this writing, the process of delisting the wolves in the state of Wyoming is ongoing. However, the reclassification of wolves nationwide was completed on April 1, 2003. Wolves outside of YNP changed in status from endangered to threatened. The wolves classified in the experimental nonessential population did not change in status (USFWS and others, 2004). This classification of experimental nonessential population allows for flexibility in management decisions concerning the wolves (Smith and others, 2004). For example, control actions in the GYA included trapping and radio-collaring four wolves; intensive monitoring; increasing riders on grazing allotments; harassing wolves with rubber bullets, cracker shells, and lights; moving livestock to different pastures; and issuing four shoot on-sight permits. When non-lethal control methods were not effective, wolves were killed in an attempt to prevent further livestock depredations (USFWS and others, 2004; Table 1). At the same time that wolf numbers are rising, human population statistics in the GRTE area are also rising. The population of Teton County, Wyoming in 1990 was just over 11,000 people; today that number has increased to approximately 19,000 (U.S. Census Bureau, 2005). park visitation for GRTE has been substantial over the last several years with an average visitation of 2.5 million visitors (NPS, 2004a). Furthermore, land ownership surrounding GRTE and the establishment of grazing rights within park boundaries are problem areas for wolf-human interactions due to livestock depredation. With increasing numbers of visitors, residents, and livestock it is reasonable to assume that conflicts are going to increase also. In 1950, GRTE was expanded to in

Open-File Report↗

Management case study: Tampa Bay, Florida

Tampa Bay, Florida, USA, is a shallow, subtropical estuary that experienced severe cultural eutrophication between the 1940s and 1980s, a period when the human population of its watershed quadrupled. In response, citizen action led to the formation of a public- and private-sector partnership (the Tampa Bay Estuary Program), which adopted a number of management objectives to support the restoration and protection of the bay’s living resources. These included numeric chlorophyll a and water-clarity targets, as well as long-term goals addressing the spatial extent of seagrasses and other selected habitat types, to support estuarine-dependent faunal guilds. Over the past three decades, nitrogen controls involving sources such as wastewater treatment plants, stormwater conveyance systems, fertilizer manufacturing and shipping operations, and power plants have been undertaken to meet these and other management objectives. Cumulatively, these controls have resulted in a 60% reduction in annual total nitrogen (TN) loads relative to earlier worse-case (latter 1970s) conditions. As a result, annual water-clarity and chlorophyll a targets are currently met in most years, and seagrass cover measured in 2008 was the highest recorded since 1950. Factors that have contributed to the observed improvements in Tampa Bay over the past several decades include the following: (1) Development of numeric, science-based water-quality targets to meet a long-term goal of restoring seagrass acreage to 1950s levels. Empirical and mechanistic models found that annual average chlorophyll a concentrations were a primary manageable factor affecting light attenuation. The models also quantified relationships between TN loads, chlorophyll a concentrations, light attenuation, and fluctuations in seagrass cover. The availability of long-term monitoring data, and a systematic process for using the data to evaluate the effectiveness of management actions, has allowed managers to track progress and make adaptive changes when needed. (2) Citizen involvement, that is, the initial reductions in TN loads, which occurred in the late 1970s and early 1980s, was a result of state regulations that were developed in response to citizens’ call for action. Improved water clarity and better fishing and swimming conditions were identified as primary goals by citizens again in the early 1990s, and led to development of numeric water-quality targets and seagrass restoration goals. More recent citizen actions, from pet waste campaigns to support of reductions in residential fertilizer use, are important elements of the nitrogen management strategy. (3) Collaborative actions, that is, in addition to numerous other collaborative ventures that have benefitted Tampa Bay, the public/private Nitrogen Management Consortium, which includes more than 40 participating organizations, has implemented over 250 nutrient-reduction projects. These projects have addressed stormwater treatment, fertilizer manufacturing and shipping, agricultural practices, reclaimed water use, and atmospheric emissions from local power stations, providing more than 300 tons of TN load reductions since 1995. (4) State and federal regulatory programs, that is, regulatory requirements, such as state statutes and rules requiring compliance with advanced wastewater treatment standards by municipal sewerage works, have played a key role in Tampa Bay management efforts. The technical basis and implementation plan of the Tampa Bay nitrogen management strategy have been developed in cooperation with state and federal regulatory agencies, and the strategy has been recognized by them as an appropriate tool for meeting water-quality standards, including federally mandated total maximum daily loads. Subsequent management efforts have focused on maintaining and extending those improvements in Tampa Bay’s environmental resources by addressing water and sediment quality and habitat protection and restoration. Implementation of a collaborative, watershed-based management process, driven by an integrated science approach, has played a central role in supporting progress toward the achievement of science-based estuary management goals.

Florida↗

Summary appraisals of the nation's ground-water resources – California region

Most people in the California Region live in a semiarid or arid climate, with precipitation less than the potential evapotranspiration- environments of perennial water deficiency. The deficiency becomes most onerous during the characteristically rainless summers and during recurrent droughts that may continue for 10--20 years. However, water from winter rain and snow can be stored for use during the dry summer months, and water stored during a wet climatic period can be used in a succeeding dry period; moreover, perennial deficiency can be overcome by bringing water from areas of perennial surplus. Ground-water reservoirs have especial significance in arid and semiarid regions as repositories where water is stored or can be stored with minimum loss by evaporation. Nearly all the ground-water reservoirs of the California Region are in alluvial sediments of valleys and plains that flank the mountain ranges. The largest, underlying the vast Central Valley, occupies 10 percent of the area of the region, has an estimated usable capacity exceeding 100 million acre-feet (125 cubic kilometres), and has an annual pumpage from wells of about 13 million acre-feet (16 cubic kilometres). Another 10 percent of the region is occupied by 55 developed ground-water reservoirs that are widely distributed; aggregate annual pumpage from them is about 3 1/2 million acre-feet (4 cubic kilometres). In the southeastern desert about 60 ground-water reservoirs occupy still another 10 percent of the region; these have been explored only enough to show that most have some usable water, but current use is negligible. In northeastern California and adjacent Oregon and Nevada, ground-water reservoirs are identified only in valleys and lowlands where wells are feasible, but basaltic rocks of the Cascade Range and Modoc Plateau are excellent aquifers distributed over an area constituting about 15 percent of the region. In sum, slightly less than half the California Region is underlain by ground-water reservoirs, either in valley fill or in volcanic rocks, which can yield significant quantities of water to wells. The rest of the California Region includes the mountains, canyons, slopes, and foothills of the Sierra Nevada, Coast Ranges, and Basin Ranges, whose consolidated rocks and products of their weathering may be permeable locally but are not generally so. Here, the prevailing method of ground-water development is still mostly trial and error, and while in many places a well can yield enough water for a family, some families might have to do without amenities such as flush toilets and automatic washers. For more than half a century the California Region has led all others in North America in pumping of ground water as well as in the area, variety, yield, and export of crops irrigated by water from wells. It has led in the development and use of deep-well turbine pumps for large yield and in the drilling of water wells to great depths. At the same time, such developments have resulted in the elimination of artesian pressures that produced thousands of flowing wells in the 19th century and led to the wide distribution of "falling water tables." Also, California was first to induce encroachment of seawater into wells (in 1906); first to recognize subsidence of land caused by pumping from wells (in 1933), generating news about land sinking in San Jose, Long Beach, and along the Delta-Mendota and Friant-Kern Canals; and first to experience pollution of ground-water reservoirs by brines, chemicals, industrial wastes, and petroleum byproducts including gasoline. The region has led in research in several fields leading to solution of many of these problems. Ground-water problems developed rapidly after World War II with booming population, agriculture, industry, and water demand during several years of regionwide drought. Water levels in wells trended downward almost everywhere as a natural effect of the drought and at accelerated rates in areas of pumping for new enterprises or to supplement subnormal surface-water supplies. The declines in many pumping areas exceeded 100 feet (30 metres), and in some confined aquifers the potentiometric surface was drawn down more than 330 feet (100 metres). The depletion of ground-water storage has had "permanent" side effects, including subsidence of the land exceeding 10 feet (3 metres) in extensive areas, and seawater intrusion that ended the useful lives of many wells along the coast and as much as 6 miles (10 kilometres) inland. Some problems have been solved, but these solutions have at times created other problems. Many ground-water reservoirs have gone through one or more stages - exploration for productive aquifers, exploitation and development for use of the water, restriction to the perennial supply or "safe" yield, importation of surface water, artificial recharge of ground water, conjunctive use of surface and ground water, protection of water quality, and integrated management of use and disposal of water. This evolutionary sequence is unique for each reservoir, and so generalizations become difficult in a regional appraisal; also, the changes with time are significant and varied, and knowledge of prior events is a prerequisite in an appraisal of the resource in a specific year. As of 1970, water levels in many wells had risen significantly from the minimum levels of record reached during the 1960's or earlier; only in areas of new development and in desert areas of long-continued "mining" of nonreplenished water was ground-water storage still being depleted. Land subsidence has continued at diminishing rates and practically has come to a halt in some areas; invading seawater has been stopped or nudged back in most places where problems were significant. The current, favorable situation has been helped by climatic variations, from drought in 1945-52 and exceedingly dry years in 1959 and 1961 to above-normal precipitation in 1969 and 1970; but most of the serious problems have been solved by human efforts, including especially the implementation of the California Water Plan, transporting water from areas of perennial surplus to areas where it is used in lieu of ground water or for ground-water replenishment. All major urban areas now import water to supplement or replace the water pumped from wells. Extensive agricultural areas that formerly were irrigated solely by ground water now obtain some of their water from surface reservoirs and canals, especially in the Central Valley. With surface water available as an alternative supply, well owners can view their ground water with complacency. But complacency can lead to neglect and carelessness and consequent deterioration of the ground-water resource by pollution. Claiming heritage from the English Common Law, the existing California law grants to the landowner (riparian) and private enterprise (appropriator) rights to the water stored in ground-water reservoirs or discharged from them, including the base flow of streams. Ground-water development has been by private and local enterprise, and the California legislature has protected and encouraged local responsibility, control, and management of ground water. As to surface water, a constitutional amendment in 1928 limited riparian rights to the quantities of water that were "reasonably required for the beneficial use to be served." The surpluses have become public waters which are collected, stored, transported, and delivered under various contracts by Federal, State, and other agencies. The agencies have not stored water underground because of uncertainty as to their rights, but some local agencies have been encouraged with favorable pricing schedules to undertake the artificial recharge and management of ground-water reservoirs. Thus, conjunctive use of surface and ground water has become a matter of interagency negotiation. Of all the constraints on effective use of ground-water reservoirs, the most formidable may be the attitudes of people. Assurance of water supply is vital in areas of water deficiency, and Government has assumed increasing responsibility for the welfare of people in these areas. Unfortunately, when Government provides this assurance, most beneficiaries demand continued subsidy to the exclusion of perhaps cheaper private development. Indeed, as the water resources are presently segregated-with private rights predominant in ground water and public interest dominant in surface water-ground-water development has suffered for lack of public concern. The region has the scientific and technologic capability for effective use of groundwater reservoirs, as shown by the achievements and programs of several districts, but many districts are not organized or staffed for such comprehensive management and will need assistance and scientific expertise available from State and Federal agencies. Those agencies, in turn, may not have the scientific data that are essential to prevent haphazard activities and to enable programs to be organized for the most effective and attractive utilization of the water resources. In these days of increasing concern over pollution, existing data are generally inadequate to assess the natural deterioration of ground waters as a basis for defining pollution.

California↗

Surficial sediment character of the Louisiana offshore continental shelf region: A GIS compilation

The Louisiana coastal zone, comprising the Mississippi River delta plain stretching nearly 400 km from Sabine Pass at the Texas border east to the Chandeleur Islands at the Mississippi border, represents one of North America’s most important coastal ecosystems in terms of natural resources, human infrastructure, and cultural heritage. At the same time, this region has the highest rates of coastal erosion and wetland loss in the Nation due to a complex combination of natural processes and anthropogenic actions over the past century. Comparison of historical maps dating back to 1855 and recent aerial photography show the Louisiana coast undergoing net erosion at highly variable rates. Rates have increased significantly during the past several decades. Earlier published statewide average shoreline erosion rates were >6 m/yr; rates have increased recently to >10 m/yr. The increase is attributable to collective action of storms, rapid subsidence, and pervasive man-made alterations of the rivers and the coast. In response to the dramatic landloss, regional-scale restoration plans are being developed by a partnership of federal and state agencies for the delta plain that have the objectives of maintaining the barrier islands, reducing wetland loss, and enhancing the natural sediment delivery processes. There is growing awareness that the sustainability of coastal Louisiana's natural resources and human infrastructure depends on the successful restoration of natural geologic processes. Critical to the long term success of restoration is scientific understanding of the geologic history and processes of the coastal zone region, including interactions between the rivers, wetlands, coast, and inner shelf. A variety of geophysical studies and mapping of Late Quaternary sedimentary framework and coastal processes by U.S. Geological Survey and other scientists during the past 50 years document that the Louisiana delta plain is the product of a complex history of cyclic delta switching by the Mississippi River and its distributaries over the past ~10,000 years that resulted in laterally overlapping deltaic depocenters. The interactions among riverine, coastal, and inner shelf processes have been superimposed on the Holocene transgression resulting in distinctive landforms and sedimentary sequences. Four Holocene shelf-phase delta complexes have been identified using seismic reflection data and vibracores. Each delta complex is bounded by transgressive surfaces. Following each cycle of deposition and abandonment, the delta lobes undergo regional subsidence and marine reworking that forms transgressive coastal systems and barrier islands. Ultimately, the distal end of each of the abandoned delta lobes is marked by submerged marine sand bodies representing drowned barriers. These sand bodies (e.g. Ship Shoal, Outer Shoal, Trinity Shoal, Tiger Shoal, St. Bernard Shoal) offer the largest volumes and highest quality sand for beach nourishment and shoreline and wetlands restoration. These four large sand shoals on inner continental shelf, representing the reworked remnants of former prograded deltaic headlands that existed on the continental shelf at lower sea level, were generated in the retreat path of the Mississippi River delta plain during the Holocene transgression. Penland and others (1989) have shown these sand bodies represent former shoreline positions associated with lower still stands in sea level. Short periods of rapid relative sea-level rise led to the transgressive submergence of the shorelines which today can be recognized at the -10 m to -20 m isobaths on the Louisiana continental shelf. Trinity Shoal and Ship Shoal represent the -10 m middle-to-late Holocene shoreline trend, whereas Outer Shoal and the St. Bernard Shoals define the -20 m early Holocene shoreline trend (Penland and others, 1989). Collectively, these sand shoals constitute a large volume of high quality sandy sediment potentially suitable for barrier island nourishment and coastal restoration. The USGS has actively supported coastal and wetlands geologic research for the past two decades in partnership with universities (e.g., Louisiana State University, University of New Orleans), state agencies (e.g. Louisiana Geological Survey, Louisiana Department of Natural Resources), and private organizations (Williams and others, 1992a,b; Williams and Cichon, 1993; List and others, 1994). These studies have focused on regional-scale mapping of coastal and wetland change and developing a better understanding of the processes that cause coastal erosion and wetlands loss, particularly the rapid deterioration of Louisiana's barrier islands, estuaries, and wetlands environments. With a better understanding of these processes, the ability to model and predict erosion and wetlands loss will improve. More accurate predictions will, in turn, allow for proper management of coastal resources. Improved predictions will also allow for better assessments of the utility of different restoration alternatives.

Louisiana↗

Use and occurrence of pesticides in the Apalachicola-Chattahoochee-Flint River basin, Georgia, Alabama, and Florida, 1960-91

The Apalachicola-Chattahoochee-Flint (ACF) River basin was one of the first 20 study units selected in 1991 by the U.S. Geological Survey for its National Water-Quality Assessment (NAWQA) program. Because pesticide contamination of surface water and ground water is a concern nationwide, a major emphasis of the NAWQA program is to examine the occurrence and distribution of pesticides in the water resources of these study unit basins. An understanding of the types and distribution of land uses; pesticide properties, pest-control practices, and pesticide use; and an evaluation of the occurrence and distribution of pesticides in the water resources of the ACF are necessary to meet this objective of the NAWQA program. This report describes land use and pesticide use at a county level, and the occurrence and distribution of pesticides in the water resources of the ACF River basin on the basis of previously-collected data. About 33 percent of the ACF River basin is used for agriculture, 16 percent is used for silviculture, and about 5 percent of the basin is in urban and suburban settings; primarily the Columbus, Albany, and Atlanta Metropolitan areas. The remainder is in wetlands and non-silvicultural forest. A broad range of synthetic-organic herbicides, insecticides, and fungicides are applied to land in agricultural, silvicultural, urban, and suburban areas. The period of intensive pesticide applications extends from March to October. Pesticide data available for the period from 1971 through 1989 in the U.S. Geological Survey National Water Information System (NWIS) and for the period from 1960 through 1991 in the U.S. Environmental Protection Agency Storage and Retrieval System (STORET) were analyzed to describe the occurrence and distribution of pesticides in water resources of the ACF River basin. Collectively, the NWIS and STORET databases contain about 19,600 individual analyses for pesticide concentration in the ACF River basin. Pesticide concentrations were at or above a minimum reporting level in about five percent of all analyses. Most of the pesticide analyses and most of the analyses having concentrations above minimum reporting levels in these databases are for organochlorine insecticides in samples collected five or more years before this study. With few exceptions, most of organochlorine insecticides are now banned from use in the United States. Concentrations of currently (1991) used pesticides were at or above a minimum reporting level in about 0.3 percent of the analyses. The geographic patterns in the occurrence and distribution of pesticides in the ACF River basin (as defined by data collected during 1960-91) are, as expected, somewhat defined by land-use patterns. DDT (together with DDD and DDE) were detected in wide distribution in the sediments and aquatic biota of primarily mainstem and reservoir sites in the Chattahoochee, Flint, and Apalachicola drainages. DDT was used through 1973 as an insecticide on cotton, fruits, and vegetables; and for mosquito control, so its widespread occurrence in both urban and agricultural settings is consistent with its use. Chlordane, heptachlor, dieldrin, and related compounds were agriculturally used through 1974, but predominantly as termiticides through the late 1980’s. Compounds in these groups have been found in the sediments and aquatic biota of tributary streams draining the Atlanta Metropolitan area and of mainstem reaches and reservoirs of the Chattahoochee River downstream from the Atlanta and Columbus, Ga., Metropolitan areas. The phenoxy-acid herbicides are widely used in residential, commercial/industrial, agricultural, and silvicultural areas of the ACF River basin. Detectable concentrations of 2,4-D were found in most of the surface-waters sampled in the Atlanta Metropolitan area. It is unfortunate that only limited inference can be drawn on temporal patterns. Many of the Federal and State agency pesticide-monitoring programs have been targeted to known sources and areas of contamination, an approach consistent with regulatory requirements focused on human health; and either were synoptic in nature or were conducted during a limited period of time. Thus, the composite temporal picture represented by these sampling efforts is inherently patchy.

Alabama, Florida, Georgia↗

Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060

The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) is a long-term cooperative project designed to assess the quality of groundwater resources used for public and domestic drinking water supplies in the State of California, to monitor and evaluate changes to that quality, to investigate the human and natural factors controlling water quality, and to improve the availability of comprehensive groundwater quality data and information. Between May 18, 2004, and May 3, 2018, the GAMA-PBP collected 3001 groundwater samples for analysis of pesticide constituents by the U.S. Geological Survey (USGS) National Water Quality Laboratory (NWQL)(note that ‘pesticide constituents’ includes parent compounds and degradates). Of these samples, 2994 were analyzed for pesticide constituents on schedules 2003, 2032, or 2033 (65 to 84 constituents), and 840 were analyzed for pesticide constituents on schedule 2060 (58 constituents). The original dataset reported by the NWQL to the USGS National Water Information System (NWIS) database contained a total of 2,688 detections of 78 pesticide constituents and 253,825 non-detections. In this original dataset, 33 percent of the 3,001 samples analyzed had reported detections of one or more pesticide constituents. This report describes the GAMA-PBP data-quality objectives for pesticide data, the procedures used to establish study reporting limits, and use of those reporting limits to censor the data from the NWQL so that the final data published by the GAMA-PBP meet these data-quality objectives. The final GAMA-PBP dataset for samples collected from May 2004 to May 2018, after censoring, had a total of 1,632 detections of 37 pesticide constituents. In the final GAMA-PBP dataset, 25 percent of the 3,001 samples analyzed had detections of one or more pesticide constituents. The presence of pesticides in groundwater is commonly evaluated by calculating detection frequencies. Detection frequencies for pesticides are sensitive to detection limits and method performance for concentrations near those limits; therefore, the two primary data quality issues addressed in the GAMA-PBP data-quality objectives for pesticides are (1) establishing criteria for classifying data from the laboratory as detections or non-detections for the purpose of data reporting by the project and (2) accounting for changes in analytical methods or method performance over time. The GAMA-PBP addresses these issues by developing study reporting limits that are used as the boundary between detections and non-detections for the reporting of GAMA-PBP results. These reporting limits are defined from method detection limits (MDLs) provided by the NWQL, unless examination of results from laboratory set blanks (LSBs) and GAMA-PBP field blanks indicates that a higher concentration censoring limit is warranted. The GAMA-PBP selected the MDL as the primary choice for defining study reporting limits for consistency with U.S. Environmental Protection Agency (EPA) guidelines for reporting detections of pesticides and other organic constituents. A five-step procedure is used to develop study reporting limits and censor the GAMA-PBP dataset accordingly. The effect of the censoring at each step is described to provide information about the relative effect of each step on the overall censoring of the dataset. Steps 1 and 2 can be implemented at the time the data are received, whereas steps 3−5 require information accumulated over an extended period. Step 1: Reject results that were most likely the result of specific contamination instances attributable to unusual field or laboratory conditions during sample collection or processing. Two such instances were identified, leading to rejection of 25 detections, which were assigned a data-quality indicator code of “Q” for “reviewed and rejected” in the NWIS database. Step 2: Use the NWQL MDLs in effect at the time each sample was analyzed as the reporting limit. A total of 506 detections were censored on this basis. Step 3: Use the maximum MDL established by the NWQL during July 2004–August 2018 (MDLmax) as the reporting limit. The rationale for using the MDLmax as the reporting limit is based primarily on the observation that the concentrations of MDLs generally increased over time. A total of 438 detections were censored on this basis. Step 4: Use the LSBs to identify periods of greater potential laboratory contamination bias and define raised reporting limits to be used during those periods. These periods were defined by using a moving average detection frequency approach. For consistency with the NWQL procedures for defining raised reporting limits on the basis of detections in LSBs, the raised reporting limits were defined as equal to three times the highest concentration measured in an LSB during the period. A total of 25 detections in groundwater samples analyzed during periods of increased laboratory contamination bias were censored. Step 5: Use the LSBs and field blanks to identify potential contamination bias from field or laboratory processes outside of the time periods identified in step 4. The NWQL protocols were used to define the MDLs from blanks analyzed outside of the periods identified in step 4. If an MDL defined from blanks was greater than the MDLmax, the MDL defined from blanks was used to censor the data. One constituent had a study reporting limit defined on this basis, and a total of 62 detections in groundwater samples were censored. As of 2019, the USGS NWIS database does not have the capability to store both the original value reported by the NWQL and the final value published by the GAMA-PBP that reflects application of the quality-control censoring described in this report. In the interim, while this capability is developed, the 1,031 results censored in steps 2−5 are blocked from public release in NWIS, and the GAMA-PBP has published the original and final values in a USGS data release accompanying this report. The entire GAMA-PBP final dataset for pesticide constituents on schedules 2003, 2032, or 2033, or on schedule 2060 is publicly available in that USGS data release, through the USGS GAMA-PBP public web portal, and through the California State Water Resources Control Board GAMA public groundwater information system.

California↗

Southeast Regional Assessment Project for the National Climate Change and Wildlife Science Center, U.S. Geological Survey

The Southeastern United States spans a broad range of physiographic settings and maintains exceptionally high levels of faunal diversity. Unfortunately, many of these ecosystems are increasingly under threat due to rapid human development, and management agencies are increasingly aware of the potential effects that climate change will have on these ecosystems. Natural resource managers and conservation planners can be effective at preserving ecosystems in the face of these stressors only if they can adapt current conservation efforts to increase the overall resilience of the system. Climate change, in particular, challenges many of the basic assumptions used by conservation planners and managers. Previous conservation planning efforts identified and prioritized areas for conservation based on the current environmental conditions, such as habitat quality, and assumed that conditions in conservation lands would be largely controlled by management actions (including no action). Climate change, however, will likely alter important system drivers (temperature, precipitation, and sea-level rise) and make it difficult, if not impossible, to maintain recent historic conditions in conservation lands into the future. Climate change will also influence the future conservation potential of non-conservation lands, further complicating conservation planning. Therefore, there is a need to develop and adapt effective conservation strategies to cope with the effects of climate and landscape change on future environmental conditions. Congress recognized this important issue and authorized the U.S. Geological Survey (USGS) National Climate Change and Wildlife Science Center (NCCWSC; http://nccw.usgs.gov/) in the Fiscal Year 2008. The NCCWSC will produce science that will help resource management agencies anticipate and adapt to climate change impacts to fish, wildlife, and their habitats. With the release of Secretarial Order 3289 on September 14, 2009, the mandate of the NCCWSC was expanded to address climate change-related impacts on all Department of the Interior (DOI) resources. The NCCWSC will establish a network of eight DOI Regional Climate Science Centers (RCSCs) that will work with a variety of partners to provide natural resource managers with tools and information that will help them anticipate and adapt conservation planning and design for projected climate change. The forecasting products produced by the RCSCs will aid fish, wildlife, and land managers in designing suitable adaptive management approaches for their programs. The DOI also is developing Landscape Conservation Cooperatives (LCCs) as science and conservation action partnerships at subregional scales. The USGS is working with the Southeast Region of the U.S. Fish and Wildlife Service (FWS) to develop science collaboration between the future Southeast RCSC and future LCCs. The NCCWSC Southeast Regional Assessment Project (SERAP) will begin to develop regional downscaled climate models, land cover change models, regional ecological models, regional watershed models, and other science tools. Models and data produced by SERAP will be used in a collaborative process between the USGS, the FWS (LCCs), State and federal partners, nongovernmental organizations, and academia to produce science at appropriate scales to answer resource management questions. The SERAP will produce an assessment of climate change, and impacts on land cover, ecosystems, and priority species in the region. The predictive tools developed by the SERAP project team will allow end users to better understand potential impacts of climate change and sea level rise on terrestrial and aquatic populations in the Southeastern United States. The SERAP capitalizes on the integration of five existing projects: (1) the Multi-State Conservation Grants Program project "Designing Sustainable Landscapes," (2) the USGS multidisciplinary Science Thrust project "Water Availability for Ecological Needs," (3) the USGS Southeast Pilot Project "Climate Change in the Southeastern U.S. and its Impacts on Bird Distributions and Habitats," (4) a sea-level rise impacts study envisioned jointly with the National Oceanic and Atmospheric Administration (NOAA), and (5) two USGS sea-level rise impact assessment projects that address inundation hazards and provide probabilistic forecasts of coastal geomorphic change. The SERAP will expand on these existing projects and include the following tasks, which were initiated in summer 2009: * Regionally downscaled probabilistic climate-change projections * Integrated coastal assessment * Integrated terrestrial assessment * Multi-resolution assessment of potential climate change effects on biological resources: aquatic and hydrologic dynamics * Optimal conservation strategies to cope with climate change The SERAP seeks to formally integrate these tasks to aid conservation planning and design so that ecosystem management decisions can be optimized for providing desirable outcomes across a range of species and environments. The following chapters detail SERAP's efforts in providing a suite of regional climate, watershed, and landscape-change analyses and develop the interdisciplinary framework required for the biological planning phases of adaptive management and strategic conservation. The planning phase will include the identification of conservation alternatives, development of predictive models and decision support tools, and development of a template to address similar challenges and goals in other regions. The project teams will explore and develop ways to link the various ecological models arising from each component. The SERAP project team also will work closely with members of the LCCs and other partnerships throughout the life of the project to ensure that the objectives of the project meet resources mangers needs in the Southeast.

Open-File Report↗

Antibiotic, pharmaceutical, and wastewater-compound data for Michigan, 1998-2005

Beginning in the late 1990's, the U.S. Geological Survey began to develop analytical methods to detect, at concentrations less than 1 microgram per liter (ug/L), emerging water contaminants such as pharmaceuticals, personal-care chemicals, and a variety of other chemicals associated with various human and animal sources. During 1998-2005, the U.S. Geological Survey analyzed the following Michigan water samples: 41 samples for antibiotic compounds, 28 samples for pharmaceutical compounds, 46 unfiltered samples for wastewater compounds (dissolved and suspended compounds), and 113 filtered samples for wastewater compounds (dissolved constituents only). The purpose of this report is to summarize the status of emerging contaminants in Michigan waters based on data from several different project-specific sample-collection efforts in Michigan during an 8-year period. During the course of the 8-year sampling effort, antibiotics were determined at 20 surface-water sites and 2 groundwater sites, pharmaceuticals were determined at 11 surface-water sites, wastewater compounds in unfiltered water were determined at 31 surface-water sites, and wastewater compounds in filtered water were determined at 40 surface-water and 4 groundwater sites. Some sites were visited only once, but others were visited multiple times. A variety of quality-assurance samples also were collected. This report describes the analytical methods used, describes the variations in analytical methods and reporting levels during the 8-year period, and summarizes all data using current (2009) reporting criteria. Very few chemicals were detected at concentrations greater than current laboratory reporting levels, which currently vary from a low of 0.005 ug/L for some antibiotics to 5 ug/L for some wastewater compounds. Nevertheless, 10 of 51 chemicals in the antibiotics analysis, 9 of 14 chemicals in the pharmaceuticals analysis, 34 of 67 chemicals in the unfiltered-wastewater analysis, and 56 of 62 chemicals in the filtered-wastewater analysis were detected. Antibiotics were detected at 7 of 20 tested surface-water sites, but none were detected in 2 groundwater samples. Pharmaceuticals were detected at 7 of 11 surface-water sites. Wastewater compounds were detected at 25 of 31 sites for which unfiltered water samples were analyzed and at least once at all 40 surface-water sites and all 4 groundwater sites for which filtered water samples were analyzed. Overall, the chemicals detected most frequently in Michigan waters were similar to those reported frequently in other studies nationwide. Patterns of chemical detections were site specific and appear to be related to local sources, overall land use, and hydrologic conditions at the time of sampling. Field-blank results provide important information for the design of future sampling programs in Michigan and demonstrate the need for careful field-study design. Field-replicate results indicated substantial confidence regarding the presence or absence of the many chemicals tested. Overall, data reported herein indicate that a wide array of antibiotic, pharmaceutical, and organic wastewater compounds occur in Michigan waters. Patterns of occurrence, with respect to hydrologic, land use, and source variables, generally appear to be similar for Michigan as for other sampled waters across the United States. The data reported herein can serve as a basis for future studies in Michigan.

Michigan↗

Geologic effects of the March 1964 earthquake and associated seismic sea waves on Kodiak and nearby islands, Alaska

Kodiak Island and the nearby islands constitute a mountainous landmass with an aggregate area of 4,900 square miles that lies at the western border of the Gulf of Alaska and from 20 to 40 miles off the Alaskan mainland. Igneous and metamorphic rocks underlie most of the area except for a narrow belt of moderately to poorly indurated rocks bordering the Gulf of Alaska coast and local accumulations of unconsolidated alluvial and marine deposits along the streams and coast. The area is relatively undeveloped and is sparsely inhabited. About 4,800 of the 5,700 permanent residents in the area live in the city of Kodiak or at the Kodiak Naval Station. The great earthquake, which occurred on March 27, 1964, at 5:36 p.m. Alaska standard time (March 28,1964, 0336 Greenwich mean time), and had a Richter magnitude of 8.4-8.5, was the most severe earthquake felt on Kodiak Island and its nearby islands in modern times. Although the epicenter lies in Prince William Sound 250 miles northeast of Kodiak—the principal city of the area—the areal distribution of the thousands of aftershocks that followed it, the local tectonic deformation, and the estimated source area of the subsequent seismic sea wave, all suggest that the Kodiak group of islands lay immediately adjacent to, and northwest of, the focal region from which the elastic seismic energy was radiated. The duration of strong ground motion in the area was estimated at 2½ minutes. Locally, the tremors were preceded by sounds audible to the human ear and were reportedly accompanied in several places by visible ground waves. Intensity and felt duration of the shocks during the main earthquake and aftershock sequence varied markedly within the area and were strongly influenced by the local geologic environment. Estimated Mercalli intensities in most areas underlain by unconsolidated Quaternary deposits ranged from VIII to as high as IX. In contrast, intensities in areas of upper Tertiary rock ranged from VII to VIII, and in areas of relatively well indurated lower Tertiary and Mesozoic rocks, from VI to VII. Local subsidence of as much as 10 feet was widespread in noncohesive granular deposits through compaction, flow, and sliding that resulted from vibratory loading during the earthquake. This phenomenon, which was largely restricted to saturated beach and alluvial deposits or artificial fill, was locally accompanied by extensive cracking of the ground and attendant ejection of water and water-sediment mixtures. Numerous landslides, including a wide variety of rockfalls, rockslides, and flows along steep slopes, were triggered by the long-duration horizontal and vertical accelerations during the earthquake. The landslides are most numerous in a narrow belt along the southeast coast of Kodiak Island and the nearby offshore islands. Their abundance appears to be related to an area underlain predominantly by Tertiary rocks. Temporary and permanent changes of level occurred after the earthquake in some wells, lakes, and streams throughout the area; ice was cracked, and the salinity of a few wells increased. Permanent change of water level at some localities appears to be related to readjustments of fracture porosity by earthquake-induced movements of bedrock blocks. Increased salinity of wells in coastal areas resulted from encroachment of seawater into aquifiers after subsidence during the earthquake, and to flooding of watersheds by seismic sea waves. Vertical displacements, both downward and upward, occurred throughout the area as a result of crustal warping along a northeast-trending axis. Most of Kodiak and all of Afognak, Shuyak, and adjacent islands are within a regional zone of subsidence whose trough plunges gently northeastward and approximately coincides with the mountainous backbone of Kodiak Island. Subsidence in excess of 6 feet occurred throughout the northern part of the zone-a maximum subsidence of 6½ feet having occurred on Marmot and, eastern Afognak Islands. Southeast of the axis of tectonic tilting, uplift of at least 2lh feet occurred in a narrow zone that includes most of the southeasterly capes of Kodiak Island, the southeastern half of Sitkalidak Island, and Sitkinak Island. The uplift is inferred to extend offshore over much or all of the continental shelf adjacent to the Kodiak group of islands. Within the affected area, tectonic subsidence, which was locally augmented by surficial subsidence of unconsolidated. deposits, caused widespread inundation of shorelines and attendant damage to intertidal organisms, nearshore terrestrial vegetation, and salmon-spawning areas. The most devastating effect of the earthquake on Kodiak Island and nearby islands resulted from seismic sea waves that probably originated along a linear zone of differential uplift in the Gulf of Alaska. A train of at least seven seismic sea waves, having initial periods of 50–55 minutes, struck along all the southeast coast of the island group from 38 to 63 minutes after the earthquake. The southeast shores were repeatedly washed by destructive waves having runup heights along exposed coasts of perhaps as much as 40 feet above existing tide level, and of 8–20 feet along protected shores. Runup heights of the waves were much less on the northwest and southwest sides of the islands, and no wave damage was incurred there. Locally, high-velocity currents that accompanied the waves caused intense erosion and redistribution of unconsolidated natural and artificial shore deposits and of shallow sea-floor deposits. The Alaska earthquake was the greatest natural catastrophe to befall the Kodiak Island area in historic time. The combination of seismic shock and the earthquake-related tectonic deformation and seismic sea waves took 18 lives, destroyed property worth about $45 million, and resulted in estimated losses of income to the fishing industry of an additional $5 million. Most of the damage and all of the loss of life were directly attributable to the seismic sea waves that crippled the city of Kodiak, wiped out the village of Kaguyak, and destroyed most of the village of Old Harbor and parts of the villages of Afognak and Uzinki. Bridges and segments of the highways in the vicinity of the city of Kodiak were washed out, and parts of the Kodiak Naval Station were inundated and damaged. Especially serious to all the damaged communities was the loss of fishing boats, seafood processing plants, and other waterfront installations, which had been the mainstay of the economy. Additional heavy losses resulted from the combined regional tectonic and local surficial subsidence that occurred during the earthquake. Widespread shoreline flooding by high tides necessitated raising, protecting, or removing many installations otherwise undamaged by the earthquake or waves. Structural damage attributable to seismic shock during the earthquake was relatively light and was restricted to areas underlain by saturated unconsolidated deposits. The chief structural failure in the area as a result of shaking was the collapse of part of a cannery built on saturated beach deposits that were partially liquefied during the earthquake. Minor structural damage resulted from differential settlement and cracking of the ground on natural granular deposits and artificial fills. The overwhelming majority of structures are constructed on indurated bedrock; none of these sustained damage other than small losses resulting from shifting about and breakage of their contents.

Alaska↗

Contaminants of emerging concern in the Great Lakes: Science to inform management practices for protecting the health and integrity of wildlife populations from adverse effects: GLRI action plan I, focus area 1, goal 5

Executive Summary: Under Action Plan I (2010-2014) of the Great Lakes Restoration Initiative (GLRI), Federal and Academic partners began an investigation of the presence and distribution of contaminants of emerging concern (CECs) in the Great Lakes and potential impacts on fish and wildlife. The term CECs is applied to a broad range of chemicals that are currently in use but for which we currently lack good understanding of whether fish, wildlife, or humans are being exposed and/or whether negative health or environmental effects are expected if exposure occurs. Pharmaceuticals, personal care products, flame retardants, many current use pesticides, and poly- and perfluorinated chemicals are some well-known groups of CECs, but there is no definitive or comprehensive list that can be used to support the management of CECs to reduce impacts on the Great Lakes ecosystem. Four overarching goals were identified for this collaborative investigation: 1. Evaluate the sources, occurrence, and distribution of CECs across the Great Lakes Basin. 2. Examine associations between the distribution of CECs and land-use patterns. 3. Review both scientific literature and field-generated data to determine the potential for CECs to cause adverse effects on Great Lakes fish and wildlife populations. 4. Develop efficient strategies to survey and/or monitor for threats that CECs may pose in order to take effective management actions before those threats evolve into large scale impacts on Great Lakes ecosystems or the services they provide. Achievement of these goals ensures progress towards Focus Area 1: Toxic Substances and Areas of Concern from GLRI Action Plan I, Goal 5: “ The health and integrity of wildlife populations and habitat are protected from adverse chemical and biological effects associated with the presence of toxic substances in the Great Lakes Basin ”. This large-scale research effort was comprised of individual and collaborative projects from multiple federal agencies and academic institutions, involving over 85 investigators, and overseen by the U.S. Environmental Protection Agency (EPA) Region 5, Great Lakes National Program Office. Partners include the United States Geological Survey, the National Oceanic and Atmospheric Administration, U.S. Fish and Wildlife Service, Saint Cloud State University, the U.S. EPA Office of Research and Development, and the U.S. Army Corps of Engineers. Key findings: 1. Contaminants of emerging concern were found throughout the monitored Great Lakes tributaries, but types and concentrations vary in association with regional land use. CECs were detected in nearly all samples collected. The type and concentration of the specific contaminants detected varied considerably among field sites and in association with land use type, such as urban, agricultural, wetland, 2 or forest. Contaminants were detected in the water column, sediment, and tissues of all species surveyed in the current work (mussels, aquatic insects, fish, and insect-eating birds). 2. There were over 20 contaminants for which CEC concentrations approached or exceeded those reported to cause toxicity in laboratory experiments. This was based on detection in water, sediments and or biota at one or more field sites. These contaminants represent compounds that warrant further investigation and monitoring with respect to potential impacts in certain areas of the Great Lakes basin. Based on the present investigation, compounds of greatest concern include: polycyclic aromatic hydrocarbons, associated with oil-based products and combustion of organic matter; atrazine, an herbicide; dichlorvos, an insecticide; and ibuprofen and venlafaxine, both pharmaceuticals. 3. Results suggest that mixtures of CECs presently found in most Great Lakes tributary locations surveyed may elicit subtle biological effects, but likely are not, alone, causing obvious detriment to current communities of fish and wildlife. CECs detected in the Great Lakes were associated with subtle biological effects like changes in gene expression, altered circulating glucose, etc. in both wild-caught and laboratory-reared organisms. These effects were generally not indicative of reproductive failure or mortality. However, the effects may have more serious implications when combined with other sources of stress like habitat degradation, changing climate conditions, and competition with invasive species. Due to limited historical data, it is unknown whether severe CEC-related impacts have already affected aquatic communities in waterbodies that have received long-term inputs of these contaminants. Likewise, under Action Plan I, biological effects were not necessarily evaluated at the sites where CEC concentrations exceeding laboratory toxicity thresholds were detected. As a result, strategic, ongoing surveillance and monitoring of CECs is warranted. This collaborative investigation resulted in new tools, approaches, and data that can be used to inform and support the management of CECs to reduce their impacts on Great Lakes natural resources. The following products of this research effort are available through https://communities.geoplatform.gov/glri/ or by contacting the investigators (see technical chapters found in Appendices A-F): 1. Database of CEC occurrence and concentrations in US tributary streams. The database includes CEC detections in water, sediment, and fish and wildlife tissues, and represents the most comprehensive survey of CECs in the Great Lakes Region. 2. Synopses of results and key findings. Integrated summaries of results, conclusions, and management implications of the CEC research are available through reports, topical fact sheets, and presentations. 3. Technical publications: This collaborative research effort has resulted in over 50 peer-reviewed publications, agency reports, and data releases that can be of use to resource managers, the scientific community, and members of the public. 4. Innovative tools. Innovative monitoring devices, sampling equipment, conceptual frameworks, and software applications were developed over the course of this 3 research. These tools are transferable to stakeholders via internet accessibility or via specifications, instructions, and demonstration detailed in technical publications. Hypotheses to guide CECs research under Action Plan II. Findings from 2010-2014 were used to guide further research in 2015-2018 for basin-wide surveillance of CECs and for sites warranting further study of potential biological impacts of CECs. Additional surveillance included both evaluation of additional classes of contaminants and expanded lists for chemical classes shown to be of greatest concern. Mixtures of some of the most frequently detected contaminants were also tested in laboratory studies to understand whether long term exposures to multiple contaminants may result in effects not evident from uncontrolled, short-term field experiments.

Great Lakes↗

Investigations needed to stimulate the development of Jordan's mineral resources

The level of living that any society can attain is a direct function of the use it makes of all kinds of raw materials (soil, water, metals, nonmetals, etc.), all kinds of energy (both animate and inanimate), and all kinds of human ingenuity; and is an inverse function of the size of the population that must share the collective product. The relation between raw materials, energy and ingenuity is such that use of a large amount of one may offset the need for large amounts of others. The most vital raw materials are water, soil, and construction materials, for these are needed in large quantities and are hard to import. Metals, chemicals, and inanimate energy are necessary for industrialization. The more of these minerals a nation possess, the better, but not nation can hope to be self-sufficient in all of the m and therefore must trade for some essential materials. Jordan’s natural resources have been little explored. The grantitc-metamorphic terrane in the southeastern part of the Kingdom could contain deposits of tungsten, rare earths, feldspar, mica, fluorite etc. and the sedimentary terrane over much of the rest of the county is favorable for the occurrence of oil. Even if none of these minerals is found, however, Jordan’s other mineral resource, if fully explored and developed in the light of modern technology, will support a far higher level of living than her people now enjoy. Very likely she can increase her rainfall by about 10 percent by cloud seeding, and she undeveloped supplies in both surface and ground water that are sufficient to nearly double her usable water supply. Even if she does not have oil or have it in large quantities, she can buy it cheaply from neighboring counties, and in addition has undeveloped sources of hydroelectric power, large reserves of bituminous limestone, large reserves of nuclear power as uranium in phosphate rock, and can use solar and wind power for special purposes. Her large supplies of construction, fertilizer, and other chemical raw materials will not only satisfy her own needs, but will yield both raw materials and some manufactured products for export. And she has valuable resource of touristic interest in the form of incomparable scenery, antiquities, and holy places, which, if properly advertised, could well become her largest single source of foreign currency. Revenues obtained from this source and from the export of agricultural products, nonmetallic minerals, and mineral products should support foreign oil purchase of oil, machinery, and other products not mined or produced internally. Full development of Jordan’s economic potential will take years to achieve and involves many complex activities. One of the most essential is one that can be pressed in the early years, namely the gathering of facts and basic data concerning the character, extent, and distribution of her resources, and the uses that can be made of them. Without each fundamental data or the understanding of their meaning or the ways to use and apply them, costly developmental projects and similar efforts to raise the level of living are likely to have limited success at best. Basic data and mineral resources are best gathered and published by permanent government agencies, for private organizations and individual cannot afford to take the risks involved in gathering data that may not have an immediate economic return; and even if private parties do collect such data they are not likely to make them general available. Of the activities needed in the field of mineral resources, some are already underway as the established function of government agencies. No bureau however, seems to have responsibility for making geologic maps and for gathering data on such things as steam flow, composition and properties of minerals and rocks, or for investigating the uses to which Jordan’s minerals might be put. To satisfy these needs, a Geological Survey and a Bureau of Mineral Industries should be formed and placed in operation as quickly as possible. The task of collecting and interpreting basic data or mineral resources must be done largely by Jordanians, for only in this way will Jordan acquire the technical competence needed to use the information. Few Jordanians have enough training or experience to work independently in these fields now, however, so help from outside technicians would be necessary over an initial training period of several years. But the number of outside technicians should never exceed the number of Jordanian technicians, and for this reason, neither organization could have a staff of more than a few people during the early years of operation.

Open-File Report↗

Character and Trends of Water Quality in the Blue River Basin, Kansas City Metropolitan Area, Missouri and Kansas, 1998 through 2007

Water-quality and ecological character and trends in the metropolitan Blue River Basin were evaluated from 1998 through 2007 to provide spatial and temporal resolution to factors that affect the quality of water and biota in the basin and provide a basis for assessing the efficacy of long-term combined sewer control and basin management plans. Assessments included measurements of stream discharge, pH, dissolved oxygen, specific conductance, turbidity, nutrients (dissolved and total nitrogen and phosphorus species), fecal-indicator bacteria (Escherichia coli and fecal coliform), suspended sediment, organic wastewater and pharmaceutical compounds, and sources of these compounds as well as the quality of stream biota in the basin. Because of the nature and myriad of factors that affect basin water quality, multiple strategies are needed to decrease constituent loads in streams. Strategies designed to decrease or eliminate combined sewer overflows (CSOs) would substantially reduce the annual loads of nutrients and fecal-indicator bacteria in Brush Creek, but have little effect on Blue River loadings. Nonpoint source reductions to Brush Creek could potentially have an equivalent, if not greater, effect on water quality than would CSO reductions. Nonpoint source reductions could also substantially decrease annual nutrient and bacteria loadings to the Blue River and Indian Creek. Methods designed to decrease nutrient loads originating from Blue River and Indian Creek wastewater treatment plants (WWTPs) could substantially reduce the overall nutrient load in these streams. For the main stem of the Blue River and Indian Creek, primary sources of nutrients were nonpoint source runoff and WWTPs discharges; however, the relative contribution of each source varied depending on how wet or dry the year was and the number of upstream WWTPs. On Brush Creek, approximately two-thirds of the nutrients originated from nonpoint sources and the remainder from CSOs. Nutrient assimilation processes, which reduced total nitrogen loads by approximately 13 percent and total phosphorus loads by double that amount in a 20-kilometer reach of the Blue River during three synoptic base-flow sampling events between August through September 2004 and September 2005, likely are limited to selected periods during any given year and may not substantially reduce annual nutrient loads. Bacteria densities typically increased with increasing urbanization, and bacteria loadings to the Blue River and Indian Creek were almost entirely the result of nonpoint source runoff. WWTPs contributed, on average, less than 1 percent of the bacteria to these reaches, and in areas of the Blue River that had combined sewers, CSOs contributed only minor amounts (less than 2 percent) of the total annual load in 2005. The bulk of the fecal-indicator bacteria load in Brush Creek also originated from nonpoint sources with the remainder from CSOs. From October 2002 through September 2007, estimated daily mean Escherichia coli bacteria density in upper reaches of the Blue River met the State of Missouri secondary contact criterion standard approximately 85 percent of the time. However, in lower Blue River reaches, the same threshold was exceeded approximately 45 percent of the time. The tributary with the greatest number of CSO discharge points, Brush Creek, contributed approximately 10 percent of the bacteria loads to downstream reaches. The tributary Town Fork Creek had median base-flow Escherichia coli densities that were double that of other basin sites and stormflow densities 10 times greater than those in other parts of the basin largely because approximately one-fourth of the runoff in the Town Fork Creek Basin is believed to originate in combined sewers. Genotypic source typing of bacteria indicated that more than half of the bacteria in this tributary originated from human sources with two storms contributing the bulk of all bacteria sourced as human. However, areas outsid

Scientific Investigations Report↗

Presence, distribution, and potential sources of nitrate and selected pesticides in the surficial aquifer along the Straight River in north-central Minnesota, 1992-93

The presence and distribution of nitrate and selected pesticides in ground water in the surficial aquifer along the Straight River in north-central Minnesota were studied. Local residents and public officials are concerned that these substances may pose a health hazard to humans and livestock. Nitrate and pesticides may move downward from cultivated croplands, livestock feedlots and manured fields, waste-water lagoons, and residential development to the ground water. Ground water near the water table ranged in nitrate-nitrogen concentration (based on median values determined for sampled monitoring wells) from less than 5 to a little greater than 20 mg/L (milligrams per liter) except for one concentration of 50 mg/L downgradient from a feedlot and manured field. Increased nitrate-nitrogen concentrations generally were coincident with cultivated croplands. Decreased nitrate-nitrogen concentrations generally were coincident with forests. Trace amounts of atrazine were detected in 4 of 8 ground-water samples collected from 8 monitoring wells screened near the water table. Detections were more frequent in cultivated croplands (detections at 3 of 5 monitoring wells) than in forests (detections at 1 of 3 monitoring wells). Atrazine concentrations ranged from 0.01 to 0.11 ( μ g/L (micrograms per liter), which are well below the MCL (Maximum Contaminant Level) of 3 μ g/L established by the USEPA (U.S. Environmental Protection Agency). Trace amounts of metolachlor and alachlor were detected in one of the samples in which atrazine was detected. MCLs for metolachlor and alachlor have not been established by the USEPA. The median nitrate-nitrogen concentration determined from sampled monitoring wells along the direction of ground-water flow through five land-use settings: (1) increased from slightly greater than 0 to 50 mg/L near the water table at a feedlot and an adjacent manured field; animal waste was a nitrate source; (2) increased from 8.0 to 16 mg/L near the water table at cultivated croplands irrigated with municipal treated waste water; fertilizer probably was a nitrate source; (3) increased from slightly greater than 0 to 14 mg/L near the bottom of the aquifer at cultivated croplands irrigated with ground water; fertilizer probably was a nitrate source; (4) increased from 1.6 to 3.7 mg/L near the water table and from slightly greater than 0 to 2.8 mg/L near the bottom of the aquifer at a residential development; septic-system leachates, and possibly lawn fertilizer, may have been nitrate sources; and (5) decreased from 14 to 2.6 mg/L near the water table at three waste-water treatment lagoons; waste water was not a nitrate source. Upgradient to downgradient mean or individual nitrogen isotope δ 15 N values in % o (delta units in parts per thousand) determined for sampled monitoring wells along the direction of ground-water flow through the five land-use settings were: (1) 5.1 % o and 4.0 % o for the feedlot and adjacent manured field; (2) 1.1 % o and 0.9 % o for the cultivated croplands irrigated with waste water; (3) 3.8 % o and 2.7 % o for the cultivated croplands irrigated with ground water; (4) 3.4 % o and 4.9 % o for the residential development; and (5) 1.7 % o and 3.0 % o for the three waste-water lagoons. Nitrate from fertilizer appeared to have been present in ground water at the waste-water lagoons, cultivated croplands irrigated with waste water, and cultivated croplands irrigated with ground water. Nitrate from soil organic matter rather than from animal waste appeared to have been present in ground water at the feedlot and adjacent manured field.

Minnesota↗

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Vermejo Project area and the Maxwell National Wildlife Refuge, Colfax County, northeastern New Mexico, 1993

Based on findings of limited studies during 1989-92, a reconnaissance investigation was conducted in 1993 to assess the effects of the Vermejo Irrigation Project on water quality in the area of the project, including the Maxwell National Wildlife Refuge. This project was part of a U.S. Department of the Interior National Irrigation Water-Quality Program to determine whether irrigation drainage has caused or has the potential to cause significant harmful effects on human health, fish, and wildlife and whether irrigation drainage may adversely affect the suitability of water for other beneficial uses. For this study, samples of water, sediment, and biota were collected from 16 sites in and around the Vermejo Irrigation Project prior to, during the latter part of, and after the 1993 irrigation season (April, August-September, and November, respectively). No inorganic constituents exceeded U.S. Environmental Protection Agency drinking-water standards. The State of New Mexico standard of 750 micrograms per liter for boron in irrigation water was exceeded at three sites (five samples), though none exceeded the livestock water standard of 5,000 micrograms per liter. Selenium concentrations exceeded the State of New Mexico chronic standard of 2 micrograms per liter for wildlife and fisheries water in at least eight samples from five sites. Bottom-sediment samples were collected and analyzed for trace elements and compared to concentrations of trace elements in soils of the Western United States. Concentrations of three trace elements at eight sites exceeded the upper values of the expected 95-percent ranges for Western U.S. soils. These included molybdenum at one site, selenium at seven sites, and uranium at four sites. Cadmium and copper concentrations exceeded the National Contaminant Biomonitoring Program 85th percentile in fish from six sites. Average concentrations of selenium in adult brine flies (33.7 μ g/g dry weight) were elevated above concentrations in other invertebrates. Concentrations of other elements were below their respective toxicity levels. Plants, invertebrates, fish, and fish fillets were collected and analyzed. These analyses were compared to diagnostic criteria and to each other to determine the extent of bioaccumulation of trace elements. Plants contained larger dry weight concentrations of aluminum, arsenic, boron, chromium, iron, lead, magnesium, manganese, nickel, and vanadium than invertebrates and fish. Adult brine flies, gathered from playas, contained larger geometric mean dry weight concentrations of boron, magnesium, and selenium than other invertebrates. Of all samples collected, the largest mercury concentrations were found in fish fillets, although these concentrations were below levels of concern. Mercury and selenium bioaccumulation was evident in various habitats of the study area. Biological samples from Natural playa, an endemic wetland, and Half playa, a playa that receives additional water through seepage and irrigation delivery canals, generally had elevated concentrations of boron, iron, magnesium, and selenium than samples from reservoir and river sites. Selenium concentrations were lowest in biota from the two reservoir sites, although a wetland immediately downstream from the dam impounding Lake No. 13 (created by seepage from the reservoir) had elevated concentrations of selenium in biota. The geometric mean selenium concentration of whole-fish samples, except those from Lakes No. 13 and No. 14, exceeded the 5- μ g/g dry weight selenium concentration that demarcates the approximate lower limit of the threshold range of concentrations that have freen associated with adverse effects on piscine reproduction. Biota collected on and in the area around Maxwell National Wildlife Refuge contained concentrations of selenium that are in the lower range of threshold values that have been associated (dietarily) with risks of avian reproductive abnormalities. Bottom-sediment samples from two sites downstream from the irrigation project were collected and analyzed for 23 organic compounds (principally organochlorine pesticide residues). Three compounds were detected at the two sites: DDD was found at 0.2 microgram per kilogram, DDE was detected at 0.1 microgram per kilogram at both sites, and chlordane was detected at 1 microgram per kilogram. None of the 28 whole-fish and fillet samples analyzed for PCB and organochlorine pesticide residues contained any of the 23 organic compounds tested for at concentrations higher than the analytical reporting limit (less than 0.01 μ g/g wet weight). Concentrations of inorganic analytes were generally within established guidelines or expected concentrations for water, sediment, and biota. lirigation-return flows were found to be unrelated to adverse effects in biota.

New Mexico↗

Chemicals of emerging concern in water and bottom sediment in the Great Lakes Basin, 2012: collection methods, analytical methods, quality assurance, and study data

In synoptic surveys of surface-water quality across the United States, a large group of organic chemicals associated with agricultural, household, and industrial waste have been detected. These chemicals are referred to collectively as chemicals of emerging concern (CECs) and include prescription drugs and antibiotics, over-the-counter medications, reproductive hormones, personal-care products, detergent metabolites, and flame retardants. The U.S. Geological Survey (USGS) collaborated with the U.S. Fish and Wildlife Service and the U.S. Environmental Protection Agency on a study to identify the presence of CECs in water and bottom-sediment samples collected during 2012 at 66 sites throughout the Great Lakes Basin. The 2012 effort is part of a long-term study that was initiated in 2010. The purposes of this report are to document the collection and analytical methods, provide the quality-assurance data and analyses, and provide the water and bottom-sediment data for this study of CECs in the Great Lakes Basin for 2012. A previous report documents data collected during 2010 and 2011. The methods used for chemical analyses were identical between the 2010–11 and 2012 studies, with the exception that a method to determine nontarget chemicals was used during 2010–11. The data from this study are published as a USGS Data Series Report to ensure adequate documentation of the original methods and provide a citable source for study data. This report contains no interpretations of the study data. The chemical data are as reported by the laboratory and have not been censored or adjusted unless otherwise noted. Field measurements were recorded and samples were collected in April and May and in September 2012, by U.S. Geological Survey, U.S. Fish and Wildlife Service, and U.S. Environmental Protection Agency personnel. Study sites included tributaries to the Great Lakes located near Duluth, Minnesota; King, Wisconsin; Green Bay, Wis.; Detroit, Michigan; Monroe, Mich.; Toledo, Ohio, and Rochester, New York. Water and bottom-sediment samples were analyzed at the USGS National Water Quality Laboratory in Denver, Colorado, for a broad suite of CECs. During this 2012 study, 140 environmental and 8 field duplicate samples of surface water and wastewater effluent, 1 field blank water sample, and 5 field spike water samples were collected or prepared. Water samples were analyzed at the USGS National Water Quality Laboratory using laboratory schedule 4433 for wastewater indicators, research method 8244 for pharmaceuticals, and laboratory schedule 4434 for steroid hormones, sterols, and bisphenol A. For wastewater indicators in unfiltered water, 61 of the 68 chemicals analyzed using laboratory schedule 4433 had detectable concentrations ranging from 0.002 to 64.4 micrograms per liter. Thirty-eight of the 48 chemicals analyzed using research method 8244 for pharmaceuticals in unfiltered water had detectable concentrations ranging from 0.002 to 3.32 micrograms per liter. Twelve of the 20 chemicals analyzed using laboratory schedule 4434 for steroid hormones, sterols, and bisphenol A in unfiltered water had detectable concentrations ranging from 0.43 to 120,000 nanograms per liter. During this study, 53 environmental samples, 4 field duplicate samples, and 8 field spike samples of bottom sediment and laboratory matrix-spike samples were analyzed for a wide variety of CECs at the USGS National Water Quality Laboratory using laboratory schedule 5433 for wastewater indicators; research method 6434 for steroid hormones, sterols, and bisphenol A; and research method 9008 for human-use pharmaceuticals and antidepressants. Forty of the 57 chemicals analyzed using laboratory schedule 5433 had detectable concentrations ranging from 1 to 49,000 micrograms per kilogram. Fourteen of the 20 chemicals analyzed using research method 6434 had detectable concentrations ranging from 0.04 to 24,940 nanograms per gram. Ten of the 20 chemicals analyzed using research method 9008 had detectable concentrations ranging from 0.59 to 197.5 micrograms per kilogram. Five of the 11 chemicals analyzed using research method 9008 had detectable concentrations ranging from 1.16 to 25.0 micrograms per kilogram.

Great Lakes Basin↗