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Evaluation of a portable automated serum chemistry analyzer for field assessment of harlequin ducks, Histrionicus histrionicus

A portable analytical chemistry analyzer was used to make field assessments of wild harlequin ducks ( Histrionicus histrionicus ) in association with telemetry studies of winter survival in Prince William Sound, Alaska. We compared serum chemistry results obtained on-site with results from a traditional laboratory. Particular attention was paid to serum glucose and potassium concentrations as potential indicators of high-risk surgical candidates based on evaluation of the field data. The median differential for glucose values ( 𝑁 = 8 2 ) between methods was 0.6 mmol/L (quartiles 0.3 and 0.9 mmol/L) with the median value higher when assayed on site. Analysis of potassium on site returned a median of 2.7 mmol/L ( 𝑁 = 8 8 ; quartiles 2.4 and 3.0 mmol/L). Serum potassium values were too low for quantitation by the traditional laboratory. Changes in several serum chemistry values following a three-day storm during the study support the value of on site evaluation of serum potassium to identify presurgical patients with increased anesthetic risk.

Alaska↗

Improving predictive power of physically based rainfall-induced shallow landslide models: a probablistic approach

Distributed models to forecast the spatial and temporal occurrence of rainfall-induced shallow landslides are deterministic. These models extend spatially the static stability models adopted in geotechnical engineering and adopt an infinite-slope geometry to balance the resisting and the driving forces acting on the sliding mass. An infiltration model is used to determine how rainfall changes pore-water conditions, modulating the local stability/instability conditions. A problem with the existing models is the difficulty in obtaining accurate values for the several variables that describe the material properties of the slopes. The problem is particularly severe when the models are applied over large areas, for which sufficient information on the geotechnical and hydrological conditions of the slopes is not generally available. To help solve the problem, we propose a probabilistic Monte Carlo approach to the distributed modeling of shallow rainfall-induced landslides. For the purpose, we have modified the Transient Rainfall Infiltration and Grid-Based Regional Slope-Stability Analysis (TRIGRS) code. The new code (TRIGRS-P) adopts a stochastic approach to compute, on a cell-by-cell basis, transient pore-pressure changes and related changes in the factor of safety due to rainfall infiltration. Infiltration is modeled using analytical solutions of partial differential equations describing one-dimensional vertical flow in isotropic, homogeneous materials. Both saturated and unsaturated soil conditions can be considered. TRIGRS-P copes with the natural variability inherent to the mechanical and hydrological properties of the slope materials by allowing values of the TRIGRS model input parameters to be sampled randomly from a given probability distribution. The range of variation and the mean value of the parameters can be determined by the usual methods used for preparing the TRIGRS input parameters. The outputs of several model runs obtained varying the input parameters are analyzed statistically, and compared to the original (deterministic) model output. The comparison suggests an improvement of the predictive power of the model of about 10% and 16% in two small test areas, i.e. the Frontignano (Italy) and the Mukilteo (USA) areas, respectively. We discuss the computational requirements of TRIGRS-P to determine the potential use of the numerical model to forecast the spatial and temporal occurrence of rainfall-induced shallow landslides in very large areas, extending for several hundreds or thousands of square kilometers. Parallel execution of the code using a simple process distribution and the Message Passing Interface (MPI) on multi-processor machines was successful, opening the possibly of testing the use of TRIGRS-P for the operational forecasting of rainfall-induced shallow landslides over large regions.

Geoscientific Model Development and Discussions↗

Simultaneous determination of Cr(iii) and Cr(vi) using reversed-phased ion-pairing liquid chromatography with dynamic reaction cell inductively coupled plasma mass spectrometry

A method for the simultaneous determination of Cr(iii) and Cr(vi) species in waters, soil leachates and synthetic bio-fluids is described. The method uses reversed-phase ion-pairing liquid chromatography to separate the chromium species and a dynamic reaction cell (DRC??) equipped ICP-MS for detection of chromium. Separation of the chromium species is carried out in less than 2 min. Cr(iii) is complexed with ethylenediaminetetraacetic acid (EDTA) prior to separation by mixing samples with the mobile phase containing 2.0 mM tetrabutylammonium hydroxide (TBAOH), 0.5 mM EDTA (dipotassium salt), and 5% (vol/vol) methanol, adjusted to pH 7.6. The interfering 40Ar 12C+ background peak at mass 52 was reduced by over four orders of magnitude to less than 200 cps by using 0.65 mL min-1 ammonia as a reaction gas and an RPq setting on the DRC of 0.75. Method detection limits (MDLs) of 0.09 ??g L-1 for Cr(iii) and 0.06 ??g L-1 for Cr(vi) were obtained based on peak areas at mass 52 for 50 ??L injections of low level spikes. Reproducibility at 2 ??g L-1 was 3% RSD for 5 replicate injections. The tolerance of the method to various levels of common cations and anions found in natural waters and to matrix constituents found in soil leachates and simulated gastric and lung fluids was tested by performing spike recovery calculations for a variety of samples. ?? The Royal Society of Chemistry.

Journal of Analytical Atomic Spectrometry↗

Determination of selected azaarenes in water by bonded-phase extraction and liquid chromatography

A method for the rapid and simple quantitative determination of quinoline, isoquinoline, and five selected three-ring azaarenes in water has been developed. The azaarene fraction is separated from its carbon analogues on n-octadecyl packing material by edition with acidified water/acetonitrile. Concentration as great as 1000-fold is achieved readily. Instrumental analysis involves high-speed liquid chromatography on flexible-walled, wide-bore columns with fluorescence and ultraviolet detection at several wavelengths employing filter photometers in series. Method-validation data is provided as azaarene recovery efficiency from fortified samples. Distilled water, river water, contaminated ground water, and secondary-treatment effluent have been tested. Recoveries at part-per-billion levels are nearly quantitative for the three-ring compounds, but they decrease for quinoline and isoquinoline.

Analytical Chemistry↗

230Th/U ages Supporting Hanford Site‐Wide Probabilistic Seismic Hazard Analysis

This product represents a USGS Administrative Report that discusses samples and methods used to conduct uranium-series isotope analyses and resulting ages and initial 234U/238U activity ratios of pedogenic cements developed in several different surfaces in the Hanford area middle to late Pleistocene. Samples were collected and dated to provide calibration of soil development in surface deposits that are being used in the Hanford Site-Wide probabilistic seismic hazard analysis conducted by AMEC. The report includes description of sample locations and physical characteristics, sample preparation, chemical processing and mass spectrometry, analytical results, and calculated ages for individual sites. Ages of innermost rinds on a number of samples from five sites in eastern Washington are consistent with a range of minimum depositional ages from 17 ka for cataclysmic flood deposits to greater than 500 ka for alluvium at several sites.

Washington↗

Evaluation of analytical techniques to determine AQUI-S® 20E (eugenol) concentrations in water

There is a critical need in U.S. public aquaculture and fishery management programs for an immediate-release sedative, i.e. a compound that can be safely and effectively used to sedate fish and subsequently, allow for their immediate release. AQUI-S® 20E (10% active ingredient, eugenol; any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government) is being pursued for U.S. approval as an immediate-release sedative. As part of the approval process, data describing animal safety and efficacy are needed. Essential to conducting studies that generate those data, is a method to accurately and precisely determine AQUI-S® 20E concentrations in exposure baths. Spectrophotometric and solid phase extraction (SPE)–high pressure liquid chromatography (LC) methods were developed and evaluated as methods to determine AQUI-S® 20E (eugenol) concentrations in water, methods that could be applied to any situation where eugenol was being evaluated as a fish sedative. The spectrophotometric method was accurate and precise (accuracy, > 87%; precision, < 0.70 %CV) when determining eugenol concentrations in solutions of 50 to 1000 mg/L AQUI-S® 20E made with LC grade water and water with varying pH and hardness. The spectrophotometric method's accuracy was negatively affected when analyzing water containing fish feed. The SPE–LC method was also accurate and precise (accuracy > 86%; precision < 8.9 %CV) when determining eugenol concentrations in solutions of 50 to 1000 mg/L AQUI-S® 20E made with LC grade water and water with varying pH and hardness. The SPE–LC method was influenced to a lesser degree by the presence of fish feed indicating greater specificity for eugenol.

Aquaculture↗

Concentrations of Insecticides in Selected Surface Water Bodies in Suffolk County, New York, Before and After Mosquito Spraying, 2002-04

Concentrations of insecticides sprayed from truck or helicopter onto selected surface-water bodies in Suffolk County, N.Y., during the summers of 2002-04 decreased to below detection limits within 4 days after application. The U.S. Geological Survey (USGS), in cooperation with Suffolk County Department of Health Services (SCDHS), sampled surface waters from selected wetlands for insecticides that were sprayed seasonally from a truck or helicopter as part of the county’s West Nile Virus vector-control program. A total of 72 samples were collected from 27 sites and analyzed for 6 compunds—malathion, methoprene, methoprene acid, piperonyl butoxide (PBO), resmethrin, and sumithrin—that are typically used to help control mosquitoes. PBO was the most frequently detected analyte (33.3%), followed by resmethrin (11.1%), methoprene (9.7%), and methoprene acid (2.4%). Sumithrin and malathion were not applied and were not detected in any of the samples. Maximum recorded concentration of compounds in surface water were: PBO (59,800 ng/L), methoprene (9,030 ng/L), methoprene acid (1,710 ng/L), and resmethrin (293 ng/L). PBO and resmethrin were detected more often in samples when the compounds were applied by a helicopter rather than a truck. This report describes the 27 sampled locations, the sampling methods, and presents the initial results of the study. Detail is provided about concentrations of the applied compounds with respect to time as well as comparisons between the two application processes (truck versus helicopter). All data collected are presented in a table.

New York↗

Integration of vegetation classification with land cover mapping: Lessons from regional mapping efforts in the Americas

Aims : Natural resource management and biodiversity conservation rely on inventories of vegetation that span multiple management or political jurisdictions. However, while remote sensing data and analytical tools have enabled production of maps at increasing spatial resolution and reliability, there are limited examples where national or continental-scaled maps are produced to represent vegetation at high thematic detail. We illustrate two examples that have bridged the gap between traditional land cover mapping and modern vegetation classification. Study area : Our two case studies include national ( USA ) and continental (North and South America) vegetation and land cover mapping. These studies span conditions from subpolar to tropical latitudes of the Americas. Methods : Both case studies used a supervised modeling approach with the International Vegetation Classification ( IVC ) to produce maps that provide for greater thematic detail. Georeferenced locations for these vegetation types are used by machine learning algorithms to train a predictive model and generate a distribution map. Results : The USA LANDFIRE (Landscape Fire and Resource Management Planning Tools Project) case study illustrates how a history of vegetation-based classification and availability of key inputs can come together to generate standard map products covering more than 9.8 million km 2 that are unsurpassed anywhere in the world in terms of spatial and thematic resolution. That being said, it also remains clear that mapping at the thematic resolution of the IVC Group and finer resolution require very large and spatially balanced inputs of georeferenced samples. Even with extensive prior data collection efforts, these remain a key limitation. The NatureServe effort for the Americas - encompassing 22% of the global land surface - demonstrates methods and outputs suitable for worldwide application at continental scales. Conclusions : Continued collection of input data used in the case studies could enable mapping at these spatial and thematic resolutions around the globe.

Vegetation Classification and Survey↗

Kullback-Leibler information in resolving natural resource conflicts when definitive data exist

Conflicts often arise in the management of natural resources. Often they result from differing perceptions, varying interpretations of the law, and self-interests among stakeholder groups (for example, the values and perceptions about spotted owls and forest management differ markedly among environmental groups, government regulatory agencies, and timber industries). We extend the conceptual approach to conflict resolution of Anderson et al. (1999) by using information-theoretic methods to provide quantitative evidence for differing stakeholder positions. Importantly, we assume that relevant empirical data exist that are central to the potential resolution of the conflict. We present a hypothetical example involving an experiment to assess potential effects of a chemical on monthly survival probabilities of the hen clam (Spisula solidissima). The conflict centers on 3 stakeholder positions: 1) no effect, 2) an acute effect, and 3) an acute and chronic effect of the chemical treatment. Such data were given to 18 analytical teams to make independent analyses and provide the relative evidence for each of 3 stakeholder positions in the conflict. The empirical evidence strongly supports only one of the 3 positions in the conflict: the application of the chemical causes acute and chronic effects on monthly survival, following treatment. Formal inference from all the stakeholder positions is provided for the 2 key parameters underlying the hen clam controversy. The estimates of these parameters were essentially unbiased (the relative bias for the control and treatment group's survival probability was -0.857% and 1.400%, respectively) and precise (coefficients of variation were 0.576% and 2.761%, respectively). The advantages of making formal inference from all the models, rather than drawing conclusions from only the estimated best model, is illustrated. Finally, we contrast information-theoretic and Bayesian approaches in terms of how positions in the controversy enter the formal analysis.

Wildlife Society Bulletin↗

Foundations of modeling resilience of tidal saline wetlands to sea-level rise along the U.S. Pacific Coast

Context Tidal saline wetlands (TSWs) are highly threatened from climate-change effects of sea-level rise. Studies of TSWs along the East Coast U.S. and elsewhere suggest significant likely losses over coming decades but needed are analytic tools gauged to Pacific Coast U.S. wetlands. Objectives We predict the impacts of sea-level rise (SLR) on the elevation capital (vertical) and migration potential (lateral) resilience of TSWs along the Pacific Coast U.S. over the period 2020 to 2150 under a 1.5-m SLR scenario, and identified TSWs at risk of most rapid loss of resilience. Here, we define vertical resilience as the amount of elevation capital and lateral resilience as the amount of TSW displacement area relative to existing area. Methods We used Bayesian network (BN) modeling to predict changes in resilience of TSWs as probabilities which can be useful in risk analysis and risk management. We developed the model using a database sample of 26 TSWs with 147 sediment core samples, among 16 estuary drainage areas along coastal California, Oregon, and Washington. Results We found that all TSW sites would lose at least 50% of their elevation capital resilience by 2060 to just before 2100, and 100% by 2070 to 2130, depending on the site. Under a 1.5-m sea-level rise scenario, nearly all sites in California will lose most or all of their lateral migration resilience. Resilience losses generally accelerated over time. In the BN model, elevation capital resilience is most sensitive to elevation capital at time t, mean tide level at time t, and change in sea level from time 0 to time t. Conclusions All TSW sites were projected with declines in resilience. Our model can further aid decision-making such as prioritizing sites for potential management adaptation strategies. We also identified variables most influencing resilience predictions and thus those potentially prioritized for monitoring or development of strategies to prevent loss regionally.

California, Oregon, Washington↗

A comprehensive assessment of membrane bioreactor contaminant removal efficacy through analytical chemistry, fish exposures, and microbiome characterization

Treated municipal wastewater effluent is an important pathway for Contaminants of Emerging Concern (CEC) to enter aquatic ecosystems. As the aging wastewater infrastructure in many industrialized countries requires upgrades or replacement, assessing new treatment technologies in the context of CEC effects may provide additional support for science-based resource management. Here, we used three lines of evidence, analytical chemistry, fish exposure experiments, and fish and water microbiome analysis, to assess the effectiveness of membrane bioreactor treatment (MBR) to replace traditional activated sludge treatment. To do this, we sampled a municipal wastewater treatment plant with a split wastewater stream, a portion of which was treated with an MBR and another via an oxidation ditch (OXI). The OXI and MBR treatments substantially reduced most measured CECs compared to the primary effluent (PRI). Only pesticides and some pharmaceuticals were recalcitrant to both secondary treatment methods. While ammonia toxicity of PRI prevented its inclusion in fish exposure experiments, exposure of fish with waters from the OXI or MBR treated wastewater produced only subtle biological differences with no adverse apical outcomes. These findings were consistent with low chemically derived exposure: activity ratios for OXI and MBR. Microbiome analysis of fish and wastewater highlighted the significant reduction of microbial abundance and diversity in the MBR treatment compared to all other treatments. The comparable removal efficacy of CECs in MBR makes it an attractive alternative to traditional OXI, especially when MBR may eliminate the need for tertiary treatment for wastewater disinfection.

Environmental Toxicology and Chemistry↗

Trends in streamflow and concentrations and flux of nutrients and total suspended solids in the Upper White River at Muncie, near Nora, and near Centerton, Indiana

The U.S. Geological Survey (USGS), in cooperation with The Nature Conservancy, completed a study to estimate and assess trends in streamflow and annual mean concentrations and flux of nutrients (nitrate plus nitrite, total Kjeldahl nitrogen, and total phosphorus) and total suspended solids at three USGS streamgages (hereafter referred to as “study gages”) on the Upper White River at Muncie (USGS station 03347000), near Nora (USGS station 03351000), and near Centerton (USGS station 03354000), Indiana. Water-quality data used in the analyses were collected by several agencies between calendar years 1991 and 2017, and streamflow (discharge) data were collected by the USGS. For most of the water-quality constituents, there were suitable data to facilitate an analysis of the 26-year period extending from calendar years 1991 to 2017 (water years 1992 to 2017); however, shorter analytical periods were necessary for total Kjeldahl nitrogen for the study gages at Muncie and near Centerton and for total suspended solids for the study gage near Centerton. Temporal trends in streamflows at the study gages for the period extending from water years 1978 to 2017 were assessed using Exploration and Graphics for RivEr Trends (EGRET) and Mann-Kendall and Pettitt tests. With just one exception, the annual maximum and mean daily streamflows and the annual minimum 7-day mean streamflows at the study gages demonstrated upward trends (increasing streamflows) in the EGRET analyses. The exception was the annual 7-day minimum streamflow at the study gage near Nora, which indicated no trend. Mann-Kendall tests also indicated that the average trend for the annual maximum daily, annual mean daily, and annual 7-day minimum streamflow statistics between water years 1978 and 2017 was upward at each of the study gages; however, only the trends in the annual mean daily streamflows at the study gage at Muncie and the annual maximum daily streamflows at the study gages near Nora and near Centerton were statistically significant at a 0.05 probability level. The Pettitt tests indicated that a statistically significant step trend (abrupt change) in annual mean daily streamflows occurred at each of the study gages around water year 2001. The seasonal distributions of total suspended solids, total phosphorus, nitrate plus nitrite, and total Kjeldahl nitrogen concentrations at the study gages were evaluated to identify patterns and other distinguishing characteristics by examining boxplots of concentrations as a function of month of the year. Seasonal distributions of nitrate plus nitrite concentrations and total suspended solids concentrations differed from each other but were generally similar among the three study gages for a given constituent. Median concentrations of nitrate plus nitrite were highest during the January–June months, whereas median concentrations of total suspended solids were highest during June and July. Seasonal distributions of total phosphorus concentrations were similar at the study gages near Nora and near Centerton, but the seasonal distribution was noticeably different at the study gage at Muncie, which had monthly median concentrations that were substantially lower than at the two downstream study gages (near Nora and near Centerton). The seasonal distribution of total Kjeldahl nitrogen concentrations differed in pattern among the three study gages; however, in general, some of the higher monthly median total Kjeldahl nitrogen concentrations at each study gage were associated with the late spring and summer periods. The Weighted Regressions on Time, Discharge, and Season (WRTDS) method implemented in EGRET was used to estimate water-year annual mean daily concentrations and flux of nutrients and total suspended solids, as well as estimates of concentrations and flux that were “normalized” to remove the effect of year-to-year variation in streamflow. The approximate coefficients of determination for the WRTDS regression models ranged from a high of 0.82 for total phosphorus for the study gage near Centerton to a low of 0.19 for nitrate plus nitrite for the study gage near Nora. Loads and yields of total suspended solids, total phosphorus, nitrate plus nitrite, and total Kjeldahl nitrogen were estimated for analytical periods consisting of the longest periods of concurrent record at the three study gages. Loads of each of the constituents increased sequentially from the most upstream study gage to the most downstream study gage; however, the same was not true for yields. The highest yields of total suspended solids, total phosphorus, and total Kjeldahl nitrogen occurred at the most upstream study gage (at Muncie); however, the highest yield of nitrate plus nitrite occurred at the most downstream study gage (near Centerton). WRTDS bootstrap tests were used to assess the magnitude, direction, and likelihood of changes in annual flow-normalized mean daily concentrations and flux of total suspended solids, total phosphorus, nitrate plus nitrite, and total Kjeldahl nitrogen at the study gages between water years 1997 and 2017. Changes in flow-normalized concentrations and flux of the constituents between water years 1997 and 2017 were mostly downward (decreasing). The exceptions were likely to highly likely upward (increasing) changes in (1) flow-normalized annual mean daily concentration and annual flux for total suspended solids and total phosphorus at the study gage at Muncie, (2) flow-normalized annual mean daily total phosphorus concentration at the study gage near Centerton, (3) flow-normalized annual flux of total phosphorus at the study gage near Centerton, and (4) flow-normalized annual mean daily nitrate plus nitrite concentration at the study gage near Centerton. Although an upward change in flow-normalized nitrate plus nitrite concentrations was likely at the study gage near Centerton, flow-normalized annual flux of nitrate plus nitrite at that study gage was determined to have a highly likely downward change. EGRET and Exploration and Graphics for RivEr Trends Confidence Intervals (EGRETci) analyses can be used to improve our understanding of how concentrations and flux change as functions of time and streamflow, as well as provide information on how the relations between streamflow and constituent concentrations have changed within the calendar year between any 2 years included in the analyses. Examples of those uses, illustrating changes between calendar years 1992 and 2017, were given for total suspended solids concentrations at the study gage near Nora and for nitrate plus nitrite concentrations at the study gage near Centerton.

Indiana↗

Determination of the oxidation state of uranium in apatite and phosphorite deposits

Geological and mineralogical evidence indicate that the uranium present in apatite may proxy for calcium in the mineral structure as U(IV). An experimental investigation was conducted and chemical evidence was obtained that establishes the presence of U(IV) in apatite. The following analytical procedure was developed for the determination of U(IV). Carbonatefluorapatite is dissolved in 1.5 M orthophosphoric acid at a temperature of 5°C or slightly below and fluorapatite is dissolved in cold 1.2 M hydrochloric acid (approximately 5°C) containing 1.5 g of hydroxylamine hydrochloride per 100 ml. Uranium(IV) is precipitated by cupferron using titanium as a carrier. The uranium in the precipitate is separated by use of the ethyl acetate extraction procedure and determined fluorimetrically. The validity and the limitations of the method have been established by spike experiments.

Geochimica et Cosmochimica Acta↗

Local site effects and dynamic soil behavior

Amplitudes of seismic waves increase significantly as they pass through soft soil layers near the earth's surface. This phenomenon, commonly known as site amplification, is a major factor influencing the extent of damage on structures. It is crucial that site amplification is accounted for when designing structures on soft soils. The characteristics of site amplification at a given site can be estimated by analytical models, as well as field tests. Analytical models require as inputs the geometry of all soil layers from surface to bedrock, their dynamic properties (e.g. density, wave velocity, damping), and the incident bedrock motions. Field tests involve recording and analyzing the dynamic response of sites to artificial excitations, ambient forces, and actual earthquakes. The most reliable estimates of site amplification are obtained by analyzing the recorded motions of the site during strong earthquakes. This paper presents a review of the types and the generating mechanisms of site amplification, and the models and methods that are used to characterize them from earthquake records. ?? 2001 Published by Elsevier Science Ltd.

Soil Dynamics and Earthquake Engineering↗

Computation of type curves for flow to partially penetrating wells in water-table aquifers

Evaluation of Neuman's analytical solution for flow to a well in a homogeneous, anisotropic, water-table aquifer commonly requires large amounts of computation time and can produce inaccurate results for selected combinations of parameters. Large computation times occur because the integrand of a semi-infinite integral involves the summation of an infinite series. Each term of the series requires evaluation of the roots of equations, and the series itself is sometimes slowly convergent. Inaccuracies can result from lack of computer precision or from the use of improper methods of numerical integration. In this paper it is proposed to use a method of numerical inversion of the Laplace transform solution, provided by Neuman, to overcome these difficulties. The solution in Laplace space is simpler in form than the real-time solution; that is, the integrand of the semi-infinite integral does not involve an infinite series or the need to evaluate roots of equations. Because the integrand is evaluated rapidly, advanced methods of numerical integration can be used to improve accuracy with an overall reduction in computation time. The proposed method of computing type curves, for which a partially documented computer program (WTAQ1) was written, was found to reduce computation time by factors of 2 to 20 over the time needed to evaluate the closed-form, real-time solution.

Ground Water↗

Spatially-structured statistical network models for landscape genetics

A basic understanding of how the landscape impedes, or creates resistance to, the dispersal of organisms and hence gene flow is paramount for successful conservation science and management. Spatially structured ecological networks are often used to represent spatial landscape‐genetic relationships, where nodes represent individuals or populations and resistance to movement is represented using non‐binary edge weights. Weights are typically assigned or estimated by the user, rather than observed, and validating such weights is challenging. We provide a synthesis of current methods used to estimate edge weights and an overview of common model types, stressing the advantages and disadvantages of each approach and their ability to model landscape‐genetic data. We further explore a set of spatial‐statistical methods that provide ecologists with alternative approaches for modeling spatially explicit processes that may affect genetic structure. This includes an overview of spatial autoregressive models, with a particular focus on how correlation and partial correlation are used to represent neighborhood structure with the inverse of the covariance matrix (i.e., precision matrix). We then demonstrate how to model resistance by specifying an appropriate statistical model on the nodes, conditioned on the edge weights, through the precision matrix. This integration of network ecology and spatial statistics provides a practical analytical framework for landscape‐genetic studies. The results can be used to make statistical inferences about the relative importance of individual landscape characteristics, such as the vegetative cover, hillslope, or the presence of roads or rivers, on gene flow. In addition, the R code we include allows readers to explore landscape‐genetic structure in their own datasets, which will potentially provide new insights into the evolutionary processes that generated ecological networks, as well as valuable information about the optimal characteristics of conservation corridors.

Ecological Monographs↗

Sequestration of priority pollutant PAHs from sediment pore water employing semipermeable membrane devices

Semipermeable membrane devices (SPMDs) were employed to sample sediment pore water in static exposure studies under controlled laboratory conditions using (control pond and formulated) sediments fortified with 15 priority pollutant polycyclic aromatic hydrocarbons (PPPAHs). The sediment fortification level of 750 ng/g was selected on the basis of what might be detected in a sediment sample from a contaminated area. The sampling interval consisted of 0, 4, 7, 14, and 28 days for each study. The analytical methodologies, as well as the extraction and sample cleanup procedures used in the isolation, characterization, and quantitation of 15 PPPAHs at different fortification levels in SPMDs, water, and sediment were reported previously (Williamson, M.S. Thesis, University of Missouri - Columbia, USA; Williamson et al., Chemosphere (This issue - PII: S0045-6535(02)00394-6)) and used for this project. Average (mean) extraction recoveries for each PPPAH congener in each matrix are reported and discussed. No procedural blank extracts (controls) were found to contain any PPPAH residues above the method quantitation limit, therefore, no matrix interferences were detected. The focus of this publication is to demonstrate the ability to sequester environmental contaminants, specifically PPPAHs, from sediment pore water using SPMDs and two different types of fortified sediment.

Chemosphere↗

GRA prospectus: optimizing design and management of protected areas

Protected areas comprise one major type of global conservation effort that has been in the form of parks, easements, or conservation concessions. Though protected areas are increasing in number and size throughout tropical ecosystems, there is no systematic method for optimally targeting specific local areas for protection, designing the protected area, and monitoring it, or for guiding follow-up actions to manage it or its surroundings over the long run. Without such a system, conservation projects often cost more than necessary and/or risk protecting ecosystems and biodiversity less efficiently than desired. Correcting these failures requires tools and strategies for improving the placement, design, and long-term management of protected areas. The objective of this project is to develop a set of spatially based analytical tools to improve the selection, design, and management of protected areas. In this project, several conservation concessions will be compared using an economic optimization technique. The forest land use portfolio model is an integrated assessment that measures investment in different land uses in a forest. The case studies of individual tropical ecosystems are developed as forest (land) use and preservation portfolios in a geographic information system (GIS). Conservation concessions involve a private organization purchasing development and resource access rights in a certain area and retiring them. Forests are put into conservation, and those people who would otherwise have benefited from extracting resources or selling the right to do so are compensated. Concessions are legal agreements wherein the exact amount and nature of the compensation result from a negotiated agreement between an agent of the conservation community and the local community. Funds are placed in a trust fund, and annual payments are made to local communities and regional/national governments. The payments are made pending third-party verification that the forest expanse and quality have been maintained.

Open-File Report↗