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Transport of nitrogen and phosphorus in the Cedar River Basin, Iowa and Minnesota, 2000–15

Nitrate concentrations in the Cedar River in Iowa and Minnesota have increased from an average of less than 1.0 milligram per liter in the early 1900s to more than 5.0 milligrams per liter in the 2000s and have resulted in periodic water-quality impairment of the river. Spatial differences and temporal changes in nitrogen and phosphorus transport in the Cedar River Basin are described for the period from 2000 to 2015. Data used to estimate nitrogen and phosphorus transport were collected by the U.S. Geological Survey as part of six base-flow synoptic studies and by the Minnesota Pollution Control Agency and the Iowa Department of Natural Resources as part of their long-term stream and river monitoring programs. The Cedar River transported an annual average of 53,100 tons of total nitrogen and 2,510 tons of total phosphorus during 2000–15. Three subbasins yielded an annual average of more than 30 pounds per acre (lb/acre) of nitrogen to the Cedar River, whereas two subbasins yielded an annual average of less than 20 lb/acre of nitrogen. The average annual total phosphorus yield from the Little Cedar River subbasin (0.35 lb/acre) was only about 16 percent of the yield from the greatest total phosphorus yielding Lower Cedar River subbasin (more than 1.0 lb/acre). The annual total nitrogen and total phosphorus loads did not change significantly during the study. The relation between annual stream runoff and annual total nitrogen and total phosphorus yields was not spatially uniform across the Cedar River Basin. The Beaver Creek, Black Hawk Creek, and Wolf Creek subbasins yielded the most, and the Main Stem Middle Cedar River, the Lower Cedar River, and the Little Cedar River subbasins yielded the least amount of nitrogen for a given amount of runoff. The Lower Cedar River and Wolf Creek subbasins yielded the most and the West Fork Cedar River and the Little Cedar River subbasins yielded the least phosphorus for a given amount of runoff. The results of this study describe nutrient transport during 2000–15 that can be used to evaluate future progress of nutrient reduction strategies in the Cedar River Basin.

Iowa, Minnesota↗

Distribution of mining-related trace elements in streambed and flood-plain sediment along the middle Big River and tributaries in the Southeast Missouri Barite District, 2012–15

Lead mining first began in the Big River watershed during the 1700s. Lead was the primary metal mined throughout most of the 1700s and early 1800s and it continued to be mined until the mid-1900s. Barite mining began in the middle part of the watershed in the mid- to late 1800s. Although considerable attention has been given to concentrations of miningrelated trace elements (mostly cadmium, lead, and zinc) in the Big River and its tributaries draining the Old Lead Belt, there is less information regarding concentrations of mining-related trace elements in tributaries draining the Barite District in southeast Missouri, which is downstream from the Old Lead Belt, and the contribution of sediment transported from this district to trace elements in lower reaches of the Big River. The purpose of this report is to present results of an investigation of the distribution of mining-related trace elements in sediments in the middle reach of the Big River downstream from the Old Lead Belt and the Big River tributaries that drain a large part of the Barite District. In general, concentrations of cadmium and lead in streambed sediment were largest in samples from the Big River and smallest in Barite District tributary samples. Concentrations of zinc were somewhat similar in the Big River and Barite District tributaries; however, higher concentrations were present in upstream Big River site samples, as well as in samples from one site on Maddin Creek and at another site on Old Mines Creek that drains the Barite District. Barium concentrations were considerably larger in samples from Barite District tributaries compared to samples collected on the Big River. Samples collected downstream from the Barite District on the Big River had considerably larger barium concentrations than samples collected upstream from the Barite District. Flood-plain core samples were collected from 26 cores at 5 transect locations along tributaries in the Barite District. Of the individual 693 bulk (unsieved) samples from these cores analyzed by x-ray fluorescence, the probable effects concentration (PEC) values were exceeded for cadmium (PEC of 4.98 milligrams per kilogram [mg/kg], 218 samples), lead (PEC of 128 mg/kg, 91 samples), nickel (PEC of 48.6 mg/kg, 45 samples), and zinc (PEC of 459 mg/kg, 77 samples). Of the 693 samples, 21 exceeded the U.S. Environmental Protection Agency residential yard cleanup level of 400 mg/kg for lead; 19 of these were samples from a single transect near the mouth of Mineral Fork Creek where its flood plain joins the Big River flood plain. Shortly after the December 2015 flood on the Big River (the third largest flood along the river since the 1950s), 23 samples of fine sediment deposited from the flood were collected from the Big River flood plain upstream and downstream from the Barite District and several tributaries. Overall, the general pattern of barium, lead, and zinc concentrations in the 2015 flood sediment samples was similar to that observed in the streambed-sediment samples. Overall concentrations of barium were larger at Big River sites downstream from the Barite District, and cadmium, lead, and zinc concentrations were generally similar or smaller at sites downstream from the Barite District when compared to sites upstream from the Barite District. These data indicate a substantial influx of barium from the Barite District into the Big River but only a minimal influx of cadmium, lead, and zinc.

Missouri↗

Assessment of the presence of sewage in the Mill River under low-flow conditions, Springfield, Massachusetts, 2010–11

The U.S. Geological Survey, in cooperation with the Pioneer Valley Planning Commission, the U.S. Environmental Protection Agency, and the Massachusetts Department of Environmental Protection Senator William X. Wall Experiment Station, assessed the presence of 14 commonly used human-health pharmaceutical compounds, fecal indicator bacteria, and other man-made compounds indicative of the presence of human sewage in the lower reach of the Mill River near its confluence with the Connecticut River in Springfield, Massachusetts. The study was part of the Tri-State Connecticut River Targeted Watershed Initiative and involved the collection and analysis of raw river water at three sites along the reach, extending from Watershops Pond to the mouth, over the course of a low-flow period, July through November 2010. Previous studies in the region indicated that nonpoint or undocumented sources of wastewater contributed a variety of organic contaminants and potentially harmful bacteria to rivers under both high- and low-flow conditions. Additional samples, including a raw sewage sample collected near a Mill River combined sewer overflow during a non-overflow period, were collected in March 2011. The study was designed to determine if city sewage or other domestic sources of wastewater were entering the river within this reach during low-flow conditions. No definitive evidence of sewage was measured in Mill River water samples collected during the study period. Fecal indicator bacteria, including Escherichia coli ( E. coli ) and enterococci bacteria, were detected in all Mill River water samples. In the DNA analysis of enterococci cultures from the Mill River, samples generally tested negative for the Enterococcus faecium ( esp ) human-specific genetic marker, whereas the raw sewage sample tested positive. Samples also generally tested negative in the human-specific rDNA marker assay for the anaerobic bacterium Bacteroidetes . Samples tested negative in 2010 for two Bacteroidetes human-specific genetic markers, HF134 and HF183, except samples from near the mouth of the Mill River, which tested positive. Samples collected in March 2011 from all three measurement sites tested positive for both markers. The results of bacterial analyses suggest that the fecal bacteria in summer and fall months are most likely of animal origin rather than human. Despite the urban setting, long history of development, and many potential sources of man-made contamination in the Mill River, none of the 12 water samples collected during the study contained targeted pharmaceutical compounds at concentrations greater than the analytical reporting levels. Other man-made compounds, like fluorescent whitening agents, were measured and detected in samples at low concentrations 4 out of 5 times the samples were collected; however, the other lines of evidence do not support a sewer source but rather other nonpoint sources upstream in the watershed. The results of this study do not support the hypothesis that aging sewer lines or combined sewer overflow infrastructure leak into the Mill River as tested during the low-flow conditions during sampling for this study. None of the results from Mill River samples offer conclusive evidence of the presence of sewage. Some low-level detections of pharmaceutical compounds, other man-made chemicals, and bacteria suggest an upstream, nonpoint source. A single raw sewage sample was collected, diluted, and examined for comparison with Mill River water samples and to ensure that the analytical methods could detect typical wastewater constituents. High levels of bacteria were measured, and low levels of three anthropogenic pharmaceutical compounds were detected, confirming the effectiveness of the sub-part-per-million method. The concentration of fluorescent whitening agent-1 in the sewage sample was 90,000 times greater than the median concentration in the Mill River samples.

Massachusetts↗

Hydrogeologic conceptual model of groundwater occurrence and brine discharge to the Dolores River in the Paradox Valley, Montrose County, Colorado

Salinity, or total dissolved solids (TDS), of the Colorado River is a major concern in the southwestern United States where the river provides water to about 40 million people for municipal and industrial use and is used to irrigate about 5.5 million acres of land. Much of the salinity in the Colorado River Basin is derived from natural interactions of surface water and groundwater with various geologic materials (rocks, soils, and alluvial deposits). The Dolores River in southwest Colorado is a major tributary of the Colorado River that historically accounts for about 6 percent of the salinity load to the Upper Colorado River Basin with the Paradox Valley being the primary source of salinity to the Dolores River. The Paradox Valley, one of several salt-anticline valleys in the region, is a fault-bounded topographic basin aligned with and exposing an underlying salt-anticline core. Salt deposits in the Pennsylvanian Paradox Formation of the Hermosa Group form an elongated salt diapir oriented northwest to southeast that is up to 12,000 feet (ft) thick beneath the present valley floor. Surface erosion, groundwater circulation, and weathering during Tertiary and Quaternary valley formation contributed to development of a cap rock, collapse features, breccia, and brine at the top of the exposed salt diapir. Today (2023), brine occurring in the brecciated cap rock and underlying salt deposits is in hydraulic connection with an overlying freshwater alluvial aquifer, and depending on seasonal river stage and hydrologic conditions, the brine discharges to the Dolores River causing the observed increase in salinity as the river crosses the Paradox Valley. To reduce salinity concentrations in the Dolores River, the Bureau of Reclamation (Reclamation) operates the Paradox Valley Unit (PVU). The PVU project consists of nine shallow brine pumping wells near the Dolores River and one deep disposal well where the brine is injected for disposal. When operational, the PVU pumping wells extract brine from the base of the alluvial aquifer that is piped and injected into a deep disposal well about 3 miles southwest of the PVU. The PVU became fully operational July 1, 1996, and by 2015, operation of the PVU had reduced salinity concentrations in the Dolores River by as much as 70 percent compared to pre-PVU conditions. In response to a 4.5 magnitude earthquake, injection operations, and thus PVU pumping, were ceased from March 2019 to June 2022. A trial period of PVU operation began in June 2022 with a reduced injection rate, and thus PVU pumping rate, of about two-thirds capacity to gather additional information and guide future operational decisions. In cooperation with Reclamation, the U.S. Geological Survey (USGS) developed this report to present the current (2023) understanding of groundwater and brine occurrence and discharge to the Dolores River in the Paradox Valley. Results from the compilation of spatial datasets, groundwater sampling and age dating, and aquifer tests are presented to provide improved understanding of the Paradox Valley hydrogeology, to supply datasets for a numerical groundwater-flow and brine-transport model, and to support future operations of the PVU. The hydrogeologic data provided herein, along with the most recent loading analysis for the Dolores River in the Paradox Valley, and a previous conceptual model for brine discharge to the river are used to present a conceptual understanding of groundwater occurrence in the Paradox Valley.

Colorado↗

Streamflow, water quality, and contaminant loads in the lower Charles River Watershed, Massachusetts, 1999-2000

Streamflow data and dry-weather and stormwater water-quality samples were collected from the main stem of the Charles River upstream of the lower Charles River (or the Basin) and from four partially culverted urban streams that drain tributary subbasins in the lower Charles River Watershed. Samples were collected between June 1999 and September 2000 and analyzed for a number of potential contaminants including nitrate (plus nitrite), ammonia, total Kjeldahl nitrogen, phosphorus, cadmium, chromium, copper, lead, and zinc; and water-quality properties including specific conductance, turbidity, biochemical oxygen demand, fecal coliform bacteria, Entero-coccus bacteria, total dissolved solids, and total suspended sediment. These data were used to identify the major pathways and to determine the magnitudes of contaminants loads that contribute to the poor water quality of the lower Charles River. Water-quality and streamflow data, for one small urban stream and two storm drains that drain subbasins with uniform (greater than 73 percent) land use (including single-family residential, multifamily residential, and commercial), also were collected. These data were used to elucidate relations among streamflow, water quality, and subbasin characteristics. Streamflow in the lower Charles River Watershed can be characterized as being unsettled and flashy. These characteristics result from the impervious character of the land and the complex infrastructure of pipes, pumps, diversionary canals, and detention ponds throughout the watershed. The water quality of the lower Charles River can be considered good?meeting water-quality standards and guidelines?during dry weather. After rainstorms, however, the water quality of the river becomes impaired, as in other urban areas. The poor quality of stormwater and its large quantity, delivered over short periods (hours and days), together with illicit sanitary cross connections, and combined sewer overflows, results in large contaminant loads that appear to exceed the river?s assimilative capacity. Annual contaminant loads from stormwater discharges directly to the lower Charles River are large, but most dry-weather and stormwater contaminant loads measured in this study originate from upstream of the Watertown Dam and are delivered to the lower Charles River in mainstem flows. An exception is fecal coliform bacteria. Stony Brook, a large tributary influenced by combined sewer overflow, contributed almost half of the annual fecal coliform load to the lower Charles River for Water Year 2000. Much of this fecal coliform bacteria load is discharged from Stony Brook to the lower Charles River during rain-storms. Estimated stormwater loads for future conditions suggest that sewer separation in the Stony Brook Subbasin might reduce loads of constituents associated with sewage but increase loads of constituents associated with street runoff. The unique environment offered by the lower Charles River must be considered when the environmental implications of large contaminant loads are interpreted. In particular, the lower Charles River has low hydraulic gradients, a lack of tidal flushing, a lack of natural uncontaminated sediment from erosion of upstream uncontaminated soils, and an anoxic, sulfide-rich bottom layer that forms a non-tidal salt wedge in the downstream part of the lower Charles River. Individually and in combination, these characteristics may increase the likelihood of adverse effects of some contaminants on the water, biota, and sediment of the lower Charles River.

Water-Resources Investigations Report↗

Surface-Water Quality of the Skokomish, Nooksack, and Green-Duwamish Rivers and Thornton Creek, Puget Sound Basin, Washington, 1995-98

Streamflow and surface-water-quality data were collected from November 1995 through April 1998 (water years 1996-98) from a surface-water network in the Puget Sound Basin study unit of the U.S. Geological Survey National Water-Quality Assessment program. Water samples collected monthly and during storm runoff events were analyzed for nutrients, major ions, organic carbon, and suspended sediment, and at selected sites, samples were analyzed for pesticides and volatile organic compounds. Eleven sites were established in three major watersheds--two in the Skokomish River Basin, three in the Nooksack River Basin, five in the Green-Duwamish River Basin, and one site in Thornton Creek Basin, a small tributary to Lake Washington. The Skokomish River near Potlatch, Nooksack River at Brennan, and Duwamish River at Tukwila are integrators of mixed land uses with the sampling sites locally influenced by forestry practices, agriculture, and urbanization, respectively. The remaining eight sites are indicators of relatively homogeneous land use/land cover in their basins. The site on the North Fork Skokomish River is an indicator site chosen to measure reference or background conditions in the study unit. In the Nooksack River Basin, the site on Fishtrap Creek is an indicator of agriculture, and the Nooksack River at North Cedarville is an indicator site of forestry practices in the upper watershed. In the Green-Duwamish River Basin, Springbrook Creek is an urban indicator, Big Soos Creek is an indicator of a rapidly developing suburban basin; Newaukum Creek is an indicator of agriculture; and the Green River above Twin Camp Creek is an indicator of forestry practices. Thornton Creek is an indicator of high-density urban residential and commercial development. Conditions during the first 18 months of sampling were dominated by above-normal precipitation. For the Seattle-Tacoma area, water year 1997 was the wettest of the 3 years during the sample-collection period. Nearly 52 inches fell (about 14 inches above average) and monthly precipitation was often 200 percent of normal. The wet years kept streamflows generally above normal and contributed to high concentrations of pesticides, nutrients, suspended sediment, and organic carbon in samples. On the basis of chemical concentrations, dissolved oxygen concentrations, and water temperature, the relative quality of water among the 11 study sites ranged from exceptionally high in the North Fork Skokomish and the Green to fair in Springbrook and Thornton. Water in the large rivers (Skokomish, Nooksack, Green-Duwamish) and in two of the small streams in the Puget Sound Lowlands (Big Soos and Newaukum) was characterized by dilute water chemistry with dissolved solids concentrations less than 130 milligrams per liter. Water in three other small streams in the Lowlands (Fishtrap, Springbrook, and Thornton) had dissolved solids concentrations as high as 320 milligrams per liter. Nutrient and pesticide concentrations mostly were higher in the small streams than in the large rivers. Suspended-sediment concentrations, however, were highest in the large rivers, with averages ranging from 85 to 443 milligrams per liter. During storm and flood events, suspended-sediment concentrations in samples from the Nooksack were as much as 2,800 milligrams per liter, and from the Skokomish, 1,500 milligrams per liter. Out of 86 pesticides and 86 volatile organic compounds analyzed, a total of 35 pesticides and 11 volatile organic compounds were detected at concentrations above laboratory reporting levels in samples collected from the four intensively studied sites, the lower Nooksack River, Duwamish River, Fishtrap Creek, and Thornton Creek. Herbicides were detected more frequently than insecticides. The herbicide prometon was detected in 66 percent of all 124 samples collected, followed by simazine (65 percent), atrazine (64 percent), and the insecticide diazinon (50 percent). The detected volatile organic c

Water-Resources Investigations Report↗

Ground-water levels in an alluvial plain between the Tanana and Chena Rivers near Fairbanks, Alaska 1986-93

The aquifer of an alluvial plain between the Tanana and Chena Rivers near Fairbanks, Alaska, generally consists of highly transmissive sands and gravels under water-table conditions. During 1986-88, the U.S. Geological Survey studied the distribution of ground-water levels in the alluvial plain between Moose Creek Dam and the confluence of the Tanana and Chena Rivers. Moose Creek Dam is a flood-control structure on the Chena River that impounds water only during high flows in the Chena River or during tests of the dam's control gates. Ground-water-level information is needed to help design and place septic systems, buildings, and drainage structures. Using 38 existing wells and 83 wells drilled for this study during 1986 and 1987, ground-water levels were measured to determine the depth to the water table, its seasonal variation, and its relation to changes in river and reservoir stages. Water levels were continuously measured in 10 wells and periodically measured in 110 other wells until August 1988. During 1989, water levels were measured at least once in 59 wells. Three wells were equipped with water-level recorders through 1993. River stages were measured continuously at one gaging station on the Tanana River and at two stations on the Chena River. During summer months of 1986-88, stages and discharges in the Chena River were generally less than long-term mean monthly values, whereas mean monthly stages and discharges in the Tanana River fluctuated above and below long-term mean monthly values. Depths to water in monitoring wells ranged from slightly above land surface to about 21 feet below land surface. Depths to water in the alluvial plain were within 10 feet of land surface in most areas, but were within 5 feet of land surface in many low-lying areas. In general, the water table sloped to the northwest, from the Tanana River to the Chena River, at a gradient of about 4 feet per mile. Water levels in wells within about half a mile of either river responded rapidly to changes in river stage. During summer months of 1989-93, stages and discharges in the Chena River were generally higher than those during 1986-88, whereas stages and discharges in the Tanana River were similar to those during 1986-88. During 1989, peak water levels were higher in more than half the wells measured than during peak levels observed during 1986-88. Peak water levels were also 1.9 to 3.3 feet higher in 1991 or 1992 than peak values during 1986-88 in three wells equipped with water-level recorders. Water levels in wells near Moose Creek Dam responded rapidly to changes in water levels behind the dam. During one impoundment, water levels in a well 0.1 mile from the dam rose approximately 7 feet, to 4.8 feet below land surface.

Alaska↗

Surface-water-quality assessment of the Yakima River basin, Washington: Overview of major findings, 1987-91

Surface-water-quality conditions were assessed in the Yakima River Basin, which drains 6,155 square miles of mostly forested, range, and agricultural land in Washington. The Yakima River Basin is one of the most intensively farmed and irrigated areas in the United States, and is often referred to as the “Nation’s Fruitbowl.” Natural and anthropogenic sources of contaminants and flow regulation control water-quality conditions throughout the basin. This report summarizes the spatial and temporal distribution, sources, and implications of the dissolved oxygen, water temperature, pH, suspended sediment, nutrient, organic compound (pesticide), trace element, fecal indicator bacteria, radionuclide, and aquatic ecology data collected during the 1987–91 water years. The Yakima River descends from a water surface altitude of 2,449 feet at the foot of Keechelus Dam to 340 feet at its mouth downstream from Horn Rapids Dam near Richland. The basin can be divided into three distinct river reaches on the basis of its physical characteristics. The upper reach, which drains the Kittitas Valley, has a high gradient, with an average streambed slope of 14 feet per mile (ft/mi) over the 74 miles from the foot of Keechelus Dam (river mile [RM] 214.5) to just upstream from Umtanum. The middle reach, which drains the Mid Valley, extends a distance of 33 miles from Umtanum (RM 140.4) to just upstream from Union Gap and also has a high gradient, with an average streambed slope of 11 ft/mi. The lower reach of the Yakima River drains the Lower Valley and has an average streambed slope of 7 ft/mi over the 107 miles from Union Gap (RM 107.2) to the mouth of the Yakima River. These reaches exhibited differences in water-quality conditions related to the differences in geologic sources of contaminants and land use. Compared with the rest of the basin, the Kittitas Valley and headwaters of the Naches River Subbasin had relatively low concentrations and loads of suspended sediment, nutrients, organic compounds, and fecal indicator bacteria. There were very few failures to meet the Washington State dissolved oxygen standard or exceedances of the water temperature and pH standards in this reach. In general, these areas are considered to be areas of lessdegraded water quality in the basin. The preTertiary metamorphic and intrusive rocks of the Cle Elum and Teanaway River Subbasins, however, were found to be significant geologic sources of antimony, arsenic, chromium, copper, mercury, nickel, selenium, and zinc. As a result, the arsenic, chromium, and nickel concentrations measured in the streambed sediment of the Kittitas Valley were 13 to 74 times higher than those measured in the Lower Valley. The Mid and Lower Valleys had similar water-quality conditions, governed by the intensive agricultural and irrigation activities, highly erosive landscapes, and flow regulation. Most of the failures to meet the Washington State standards for dissolved oxygen and exceedances of the standards for water temperature and pH occurred in the Mid and Lower Valleys. Agricultural drains in the Mid and Lower Valleys were found to be significant sources of nutrients, suspended sediment, pesticides, and fecal indicator bacteria. Downstream from the irrigation diversions near Union Gap, summertime streamflow in the Yakima River was drastically reduced to only a few hundred cubic feet per second. In the lower Yakima River, agricultural return flow typically accounts for as much as 80 percent of the main stem summertime flow near the downstream terminus of the basin. Therefore, the water-quality characteristics of the lower Yakima River resemble those of the agricultural drains. The highest fecal bacteria concentrations (35,000 colonies of Escherichia coli per 100 milliliters of water) were measured in the Granger/Sunnyside area, the location of most of the livestock in the basin. The east side area of the Lower Valley (area east of the Yakima River) was the predominant source area for suspended sediment and pesticides in the basin. This area had the largest acreage of irrigated land and generally received the largest application of pesticides. Owing to the highly erosive soils of the area, the suspended sediment load from the east side in June 1989 (320 kilograms per day) was five or more times larger than from any other area, and the loads of several of the more hydrophobic organic compounds were four or more times larger. An ecological assessment of the Yakima River Basin ranked physical, chemical, and biological conditions at impaired (degraded) sites against reference sites in an effort to understand how land use changes physical and chemical site characteristics and how biota respond to these changes. For this assessment, the basin was divided into four natural ecological categories: (1) Cascades ecoregion, (2) Eastern Cascades Slopes and Foothills ecoregion, (3) Columbia Basin ecoregion, and (4) large rivers. Each of these categories has a unique combination of climate and landscape features that produces a distinctive terrestrial vegetation assemblage. In the combined Cascades and Eastern Cascades site group, which had the fewest impaired sites, the metals index was the only physical and chemical index that indicated any impairment. The moderate levels of impairment noted in the invertebrate and algal communities were not, however, associated with metals, and may have been related to the effects of logging, although the intensity of logging was not directly quantified in this study. Sites in the Columbia Basin site group were all moderately or severely impaired with the exception of the two reference sites (Umtanum Creek and Satus Creek below Dry Creek), which showed no physical, chemical, or biological impairment. Three sites were heavily affected by agriculture (Granger Drain, Moxee Drain, and Spring Creek) and were listed as severely impaired by most of the physical, chemical, and biological condition indices. Agriculture was the primary cause of the impairment of biological communities in this site group. The primary physical and chemical indicators of agricultural effects were nutrients, pesticides, dissolved solids, and substrate embeddedness, which all tended to increase with agricultural intensity. The biological effects of agriculture were manifested by a decrease in the abundance and number of native species of fish and invertebrates, a shift in algal communities to species indicative of eutrophic conditions, and higher abundances. There was also an increase in the abundance and number of nonnative fish species due to the prevalence of fish that are largely tolerant of nutrient-rich conditions. Main stem (large river) sites downstream from the city of Yakima exhibited severe impairment of fish communities associated with high levels of pesticides in fish tissues and the presence of external anomalies on fish.

Washington↗

Stream water quality in coal mined areas of the lower Cheat River Basin, West Virginia and Pennsylvania, during low-flow conditions, July 1997

Introduction The Cheat River Basin is in the Allegheny Plateau and Allegheny Mountain Sections of the Appalachian Plateau Physiographic Province (Fenneman, 1946) and is almost entirely within the state of West Virginia. The Cheat River drains an area of 1,422 square miles in Randolph, Tucker, Preston, and Monongalia Counties in West Virginia and Fayette County in Pennsylvania. From its headwaters in Randolph County, W.Va., the Cheat River flows 157 miles north to the Pennsylvania state line, where it enters the Monongahela River. The Cheat River drainage comprises approximately 19 percent of the total Monongahela River Basin. The Cheat River and streams within the Cheat River Basin are characterized by steep gradients, rock channels, and high flow velocities that have created a thriving white-water rafting industry for the area. The headwaters of the Cheat River contain some of the most pristine and aesthetic streams in West Virginia. The attraction to the area, particularly the lower part of the Cheat River Basin (the lower 412 square miles of the basin), has been suppressed because of poor water quality. The economy of the Lower Cheat River Basin has been dominated by coal mining over many decades. As a result, many abandoned deep and surface mines discharge untreated acid mine drainage (AMD), which degrades water quality, into the Cheat River and many of its tributary streams. Approximately 60 regulated mine-related discharges (West Virginia Department of Environmental Protection, 1996) and 185 abandoned mine sites (U.S. Office of Surface Mining, 1998) discharge treated and untreated AMD into the Cheat River and its tributaries. The West Virginia Department of Environmental Protection (WVDEP) Office of Abandoned Mine Lands and Reclamation (AML&R) has recently completed several AMD reclamation projects throughout the Cheat River Basin that have collectively improved the mainstem water quality. The AML&R office is currently involved in acquiring grant funds and designing treatment facilities for several additional AMD sites that adversely affect the Cheat River and its tributaries. To obtain the baseline water-quality information necessary to evaluate instream treatment and alternative methods for remediating AMD and its effects, the U.S. Geological Survey (USGS), in cooperation with the WVDEP, collected stream water samples at 111 sites throughout the Lower Cheat River Basin during low-flow conditions from July 16-18, 1997. The data also will provide information on stream water quality in areas affected by AMD and thus would point to priority areas of focus, such as the sources of the AMD. This report presents the results of analyses of the samples collected in July 1997 and describes a process for ranking of stream water-quality degradation as a guide to water-resource managers considering AMD remediation activities.

Pennsylvania, West Virginia↗

Nutrients and Suspended Solids in Surface Waters of the Upper Illinois River Basin in Illinois, Indiana, and Wisconsin, 1978-97

A retrospective analysis of selected data on nutrients and suspended solids in surface waters of the upper Illinois River Basin was done as part of the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) Program. Approximately 91 percent of the upper Illinois River Basin is drained by three principal rivers: the Kankakee (and its major tributary, the Iroquois), the Des Plaines, and the Fox. The data analyzed were collected by the Illinois Environmental Protection Agency (IEPA), which operates 39 monitoring sites in the study area as part of its Ambient Water-Quality Monitoring Network, and included analyses for total ammonia nitrogen, total nitriteplus- nitrate nitrogen, total ammonia-plus-organic (total Kjeldahl) nitrogen, dissolved and total phosphorus, and total suspended solids and volatile solids. Nutrient and suspended-sediment data collected by the USGS as part of the upper Illinois River Basin NAWQA pilot study from 1987-90 were compared to IEPA data. For the 1978-97 period, in general, nutrient concentrations, with the exception of nitrate, were highest at streams in the urban areas of the Des Plaines River Basin. Streams in the Kankakee and Fox River Basins generally had lower concentrations, although the data indicate that concentrations increased in a downstream direction in these basins. These spatial patterns in nutrient concentrations correspond closely with land use in the respective basins. The elevated concentrations of ammonia and phosphorus in the urbanized Des Plaines River Basin, with respect to other sites in the study area, indicate that municipal- and industrial- waste discharges into streams of the basin increase concentrations of these nutrients in the receiving streams. In contrast, nitrate concentrations were highest in agricultural areas. Relatively large ratios of nitrogen to phosphorus and nitrate to ammonia are characteristic of agricultural drainage. On the other hand, urban tributaries were characterized by smaller ratios of nitrogen to phosphorus and nitrate to ammonia. The apparent, but nonuniform, correspondence of nutrient concentrations to urban and agricultural land use in the upper Illinois River Basin was generally consistent with findings in other river basins. A seasonal pattern of nutrient concentrations characterized by high concentrations in the winter months, depletion during the spring and summer, and minimum levels in the late summer or early fall was observed in some of the data from the upper Illinois River Basin. Monthly median concentrations of total ammonia nitrogen and nitrite plus nitrate nitrogen were at minimum levels from July through October, whereas phosphorus concentrations did not display a strong seasonal trend. The net result of nutrient inputs and transport through the river system were elevated nutrient concentrations at the most-downstream site in the study area on the Illinois River. At this site, the median concentrations of nitrate, total phosphorus, and orthophosphate were among the highest in the Mississippi River Basin, and the concentration of ammonia was the highest. Suspended-solids concentrations do not indicate any particularly strong spatial patterns among major river basins in the study area. Instead, higher suspended-solids concentrations are observed at sites draining areas of low-permeability, easily eroded soils in agricultural and urban areas alike. Seasonal variation of suspended solids were consistent at sites across the study area. In general, suspended- solids concentrations were highest in the summer and lowest in the winter. The increase during the summer can be attributed to higher streamflow and the associated increase in runoff and transport, as well as increased phytoplankton growth. Because of the high nutrient concentrations in the upper Illinois River Basin, annual loads and yields also were relatively large; however, yields of phosphorus from the Fox and Kankakee River Basins were not unusually high. The ma

Water-Resources Investigations Report↗

Depositional settings of sand beaches along whitewater rivers

The numbers and sizes of sand beaches suitable for recreation along selected whitewater rivers in the western United States depend on sand concentrations, range of discharge and the size, frequency and type of depositional settings. River-width expansions downstream from constrictions are the predominant depositional setting for sand beaches in the upper Grand Canyon and along five Wild and Scenic Rivers in Idaho, but not along other rivers. Beaches located upstream from constrictions are rare, in general, except in the Grand Canyon. Beaches found in expansions without constrictions dominate depositional sites along the Yampa and Green Rivers, are fairly common along the rivers in Idaho, but are relatively rare in the Grand Canyon. The magnitude of flow expansion is a reliable predictor of beach size. Beaches located on the inside of curves are uncommon, in general, but can be important recreation sites. The mid-channel bar setting is the least important from a recreation standpoint because that setting is rare and beaches there are typically small, and emergent only at low flow. The frequency of beaches is highly variable among rivers and the concentration of sand in transport is only partially responsible. Of the rivers studied, the unregulated Yampa River carries the highest concentrations of suspended sand and has among the most beaches (1.2 beaches km-1). Emergent sand beaches are essentially nonexistent along the Deschutes River and are rare along other Oregon rivers, yet these rivers transport some sand. Sand beaches are fairly common (0.8-1.1 beaches km-1) along the regulated Colorado River, but are comparatively rare (0.6 beaches km-1) along the unregulated Middle Fork Salmon River. The suspended sand concentrations in study reaches of these two rivers are similar, and the difference in the frequency of beaches may be largely because the processes that create beach-deposition settings are less active along the Middle Fork Salmon.

River Research and Applications↗

Rivers of the Lower Mississippi Basin

Discussed in this chapter are seven significant tributaries of the Lower Mississippi River and its major distributary. As a group, these eight rivers and their basins encompass substantial variation in physical form, hydrology, biota, ecology, and human impacts. The Current River, Ouachita River, and Saline River, flow to the Mississippi out of the U.S. Interior Highlands. The Cache River basin, centered in Arkansas, contains a vast expanse of bottomland hardwood forest and is famous for wintering waterfowl. The Hatchie River, flowing west out of Tennessee, is the longest free-flowing tributary of the Lower Mississippi River and famous for its rich diversity of mussels and fishes. The Wolf River of Tennessee supports a magnificent bald cypress-tupelo swamp and is notable as a protected urban river that flows through Memphis. The Big Sunflower River begins and ends in the alluvial floodplain of the Mississippi River and flows through a basin of intense agriculture and historical human conflict. The Atchafalaya River, the primary distributary of the Mississippi River, supports the nation's largest expanse of bottomland hardwood forest and swamp wetlands. In this chapter, we review the physiography, geomorphology, hydrology, water chemistry, land use, biological diversity, ecological processes, human impacts, and areas of need for research and management of each of these eight rivers and their basins.

Lower Mississippi River basin↗

Large-scale dam removal on the Elwha River, Washington, USA: source-to-sink sediment budget and synthesis

Understanding landscape responses to sediment supply changes constitutes a fundamental part of many problems in geomorphology, but opportunities to study such processes at field scales are rare. The phased removal of two large dams on the Elwha River, Washington, exposed 21 ± 3 million m 3 , or ~ 30 million tonnes (t), of sediment that had been deposited in the two former reservoirs, allowing a comprehensive investigation of watershed and coastal responses to a substantial increase in sediment supply. Here we provide a source-to-sink sediment budget of this sediment release during the first two years of the project (September 2011–September 2013) and synthesize the geomorphic changes that occurred to downstream fluvial and coastal landforms. Owing to the phased removal of each dam, the release of sediment to the river was a function of the amount of dam structure removed, the progradation of reservoir delta sediments, exposure of more cohesive lakebed sediment, and the hydrologic conditions of the river. The greatest downstream geomorphic effects were observed after water bodies of both reservoirs were fully drained and fine (silt and clay) and coarse (sand and gravel) sediments were spilling past the former dam sites. After both dams were spilling fine and coarse sediments, river suspended-sediment concentrations were commonly several thousand mg/L with ~ 50% sand during moderate and high river flow. At the same time, a sand and gravel sediment wave dispersed down the river channel, filling channel pools and floodplain channels, aggrading much of the river channel by ~ 1 m, reducing river channel sediment grain sizes by ~ 16-fold, and depositing ~ 2.2 million m 3 of sand and gravel on the seafloor offshore of the river mouth. The total sediment budget during the first two years revealed that the vast majority (~ 90%) of the sediment released from the former reservoirs to the river passed through the fluvial system and was discharged to the coastal waters, where slightly less than half of the sediment was deposited in the river-mouth delta. Although most of the measured fluvial and coastal deposition was sand-sized and coarser (> 0.063 mm), significant mud deposition was observed in and around the mainstem river channel and on the seafloor. Woody debris, ranging from millimeter-size particles to old-growth trees and stumps, was also introduced to fluvial and coastal landforms during the dam removals. At the end of our two-year study, Elwha Dam was completely removed, Glines Canyon Dam had been 75% removed (full removal was completed 2014), and ~ 65% of the combined reservoir sediment masses—including ~ 8 Mt of fine-grained and ~ 12 Mt of coarse-grained sediment—remained within the former reservoirs. Reservoir sediment will continue to be released to the Elwha River following our two-year study owing to a ~ 16 m base level drop during the final removal of Glines Canyon Dam and to erosion from floods with larger magnitudes than occurred during our study. Comparisons with a geomorphic synthesis of small dam removals suggest that the rate of sediment erosion as a percent of storage was greater in the Elwha River during the first two years of the project than in the other systems. Comparisons with other Pacific Northwest dam removals suggest that these steep, high-energy rivers have enough stream power to export volumes of sediment deposited over several decades in only months to a few years. These results should assist with predicting and characterizing landscape responses to future dam removals and other perturbations to fluvial and coastal sediment budgets.

Washington↗

Late Quaternary chronostratigraphic framework of terraces and alluvium along the lower Ohio River, southwestern Indiana and western Kentucky, USA

The lower Ohio River valley is a terraced fluvial landscape that has been profoundly influenced by Quaternary climate change and glaciation. A modern Quaternary chronostratigraphic framework was developed for the lower Ohio River valley using optically stimulated luminescence (OSL) dating and allostratigraphic mapping to gain insights into the nature of fluvial responses to glacial–interglacial/stadial–interstadial transitions and Holocene climate change. River deposits, T0 (youngest) to T7 (oldest), were mapped along a 75 km reach of the lower Ohio River and were dated using 46 OSL and 5 radiocarbon samples. The examination of cores combined with OSL and radiocarbon dating shows that fluvial sediments older than marine oxygen isotope stage (MIS) 2 are present only in the subsurface. Aggradation during MIS 6 (Illinoian glaciation) filled the valley to within ∼7 m of the modern floodplain, and by ∼114 ka (MIS 5e/Sangamon interglacial) the Ohio River had scoured the MIS 6 sediments to ∼22 m below the modern floodplain surface. There were no fluvial sediments in the valley with ages between MIS 5e and the middle of MIS 3. The MIS 3 ages (∼39 ka) and stratigraphic position of T5 deposits suggest the Ohio River aggraded 8–14 m during MIS 4 or MIS 3. Near the end of MIS 3, the Ohio River incised the mid Last Glacial (mid-Wisconsinan) deposits ∼10 m and began aggrading again by ∼30 ka. Aggradation continued into MIS 2, with maximum MIS 2 aggradation occurring before ∼21 ka, which is coincident with the global Last Glacial Maximum (LGM). As the Ohio River adjusted to changing fluxes in sediment load and discharge following the LGM, it formed a sequence of fill-cut terraces in the MIS 2 outwash that get progressively younger with decreasing elevation, ranging in age from ∼21 ka to ∼13 ka. From ∼14 ka to ∼13 ka the Ohio River rapidly incised ∼3 m to form a new terrace, and by ∼12 ka at the onset of the Holocene, the Ohio River established a meandering channel pattern. The river formed a broad floodplain surface from ∼12 ka to ∼6 ka, and then incised ∼1 m and formed a fill-cut terrace from ∼6 ka to ∼5 ka. After ∼5 ka, likely in response to mid-Holocene drought in North America, the Ohio River incised ∼5 m, and by ∼4 ka the river began aggrading again. The Ohio River has aggraded ∼4 m since aggradation began at ∼4 ka. The chronostratigraphic framework and reconstructed history developed here suggest that the lower Ohio River is highly sensitive to glacial–interglacial transitions and abrupt Holocene climate change and responds rapidly to these allogenic forcings.

Indiana, Kentucky↗

The ecology of river ice

Many of the world's rivers are ice-covered during winter months but increasing evidence indicates that the extent of river ice will shift substantially as winters warm. However, our knowledge of rivers during winter lags far behind that of the growing season, limiting our understanding of how ice loss will affect rivers. Physical, chemical, and biological processes change from headwaters to large rivers; thus, we expect ice processes and resulting effects on the ecology of rivers could also vary with river size, as a result of the associated changes in geomorphology, temperature regimes, and connectivity. To conceptualize these relationships, we review typically disparate literature on ice processes and winter ecology and compare what is known in the smallest and largest rivers. In doing so, we show that our ability to link ice with ecology across river networks is made difficult by a primary focus on ice processes in larger rivers and a lack of study of ecosystem processes during winter. To address some of these gaps, we provide new scenarios of river ice loss and analyses of how the annual importance of winter gross primary productivity (GPP) varies with river size. We show projected ice loss varied with large-scale watershed characteristics such as north-south orientation and that the importance of winter to annual GPP was greatest in the smallest rivers. Finally, we highlight information needed to fill knowledge gaps on winter across river networks and improve our understanding of how rivers may change as climate and ice regimes shift.

JGR Biogeosciences↗

A high-resolution, daily hindcast (1990-2021) of Alaskan river discharge and temperature from coupled and optimized physical models

Water quality and freshwater ecosystems are affected by river discharge and temperature. Models are frequently used to estimate river temperature on large spatial and temporal scales due to limited observations of discharge and temperature. In this study, we use physically based river routing and temperature models to simulate daily discharge and river temperature for rivers in 138 basins in Alaska, including the entire Yukon River basin, from 1990–2021. The river temperature model was optimized for ice free months using a surrogate-based model optimization method, improving model performance at uncalibrated river gages. A common statistical model relating local air and water temperature was used as a benchmark. The physically based river temperature model exhibited superior performance compared to the benchmark statistical model after optimization, suggesting river temperature model optimization could become more routine. The river temperature model demonstrated high sensitivity to air temperature and model parameterization, and lower sensitivity to discharge. Validation of the models showed a Kling-Gupta Efficiency of 0.46 for daily river discharge and a root mean square error of 2.04°C for daily river temperature, improving on the non-optimized physical model and the benchmark statistical model, which had root mean square errors of 3.24 and 2.97°C, respectively. The simulation shows that rivers in northern Alaska have higher maximum summer temperatures and more variability than rivers in the Central and Southern regions. Furthermore, this framework can be readily adapted for use across models and regions.

Alaska↗

Dispersal of river sediment in the Southern California Bight

The rivers of Southern California deliver episodic pulses of water, sediment, nutrients, and pollutants to the region's coastal waters. Although river-sediment dispersal is observed in positively buoyant (hypopycnal) turbid plumes extending tens of kilometers from river mouths, very little of the river sediment is found in these plumes. Rather, river sediment settles quickly from hypopycnal plumes to the seabed, where transport is controlled by bottom-boundary layer processes, presumably including fluid-mud (hyperpycnal) gravity currents. Here we investigate the geographical patterns of river-sediment dispersal processes by examining suspended-sediment concentrations and loads and the continental shelf morphology offshore river mouths. Throughout Southern California, river sediment is discharged at concentrations adequately high to induce enhanced sediment settling, including negative buoyancy. The rivers draining the Western Transverse Range produce suspended-sediment concentrations that are orders of magnitude greater than those in the urbanized region and Peninsular Range to the south, largely due to differences in sediment yield. The majority of sediment discharge from the Santa Clara River and Calleguas Creek occurs above the theoretical negative buoyancy concentration (>40 g/l). These rivers also produce event sediment loading as great as the Eel River, where fluid-mud gravity currents are observed. The continental shelf of Southern California has variable morphology, which influences the ability to transport via gravity currents. Over half of the rivers examined are adjacent to shelf slopes greater than 0.01, which are adequately steep to sustain auto-suspending gravity currents across the shelf, and have little (<10 m) Holocene sediment accumulation. Shelf settings of the Ventura, Santa Clara, and Tijuana Rivers are very broad and low sloped (less than 0.004), which suggests that fluid-mud gravity currents could transport across these shelves, albeit slowly (??10 cm/s) and only with adequate wave-generated shear stress and sediment loading. Calleguas Creek is unique in that it discharges directly into a steepsloped canyon (greater than 0.1) that should allow for violent auto-suspending gravity currents. In light of this, only one shelf setting-the Santa Clara and Ventura-has considerable Holocene sediment accumulation (exceeding 60 m), and here we show that the morphology of this shelf is very similar to an equilibrium shape predicted by gravity-current sediment transport. Thus, we conclude that a wide distribution of river-shelf settings occur in the Southern California Bight, which will directly influence sediment dispersal processes-both dilute suspended and gravity-current transport-and sediment-accumulation patterns. ?? 2009 The Geological Society of America.

Special Paper of the Geological Society of America↗

Assessing the migratory histories, trophic positions, and conditions of lake sturgeon in the St. Croix and Mississippi Rivers using fin ray microchemistry, stable isotopes, and fatty acid profiles

Background Reproducing populations of invasive carps ( Hypophthalmichthys spp.) could alter aquatic food webs and negatively affect native fishes in the Mississippi National River and Recreation Area (MISS) and the St. Croix National Scenic Riverway (SACN). However, proposed invasive carp barriers may also threaten populations of native migratory fishes by preventing movements of fish between rivers that are necessary for life history requirements. In this study, nonlethal chemical techniques were used to provide baseline data related to the condition, trophic position, and migratory histories of lake sturgeon ( Acipenser fulvescens ) captured in the Mississippi and St. Croix Rivers. Results Fish length and weight measurements and age estimates determined from pectoral fin rays demonstrated that lake sturgeon from the Mississippi River had greater lengths-at-age compared to sturgeon from the St. Croix River. However, length–weight relations were similar for sturgeon from the Mississippi and St. Croix Rivers. Lake sturgeon captured from different locations had distinguishable fatty acid signatures, and stable isotope analyses demonstrated that lake sturgeon from the Mississippi River generally feed at a higher trophic level than those in the St. Croix River. Strontium-to-calcium ratios (Sr:Ca) from fin ray cross sections indicated that sturgeon captured from the Mississippi River had higher Sr:Ca values than sturgeon captured from the St. Croix River, and natal origins and capture locations were not significantly different among sturgeon captured within individual rivers. Most sturgeon were captured in water with a similar Sr:Ca signature as their natal waters, indicating that there is some separation between populations of lake sturgeon in the St. Croix and Mississippi Rivers. However, Sr:Ca data indicated substantial variation in movement patterns among individual lake sturgeon, indicating that populations interact through migrations of individual fish between rivers. Conclusions Study results provide baseline condition and food web structure index data for assessing changes in lake sturgeon populations should invasive carps become established in these areas of the Mississippi and St. Croix Rivers. Controlled-exposure and telemetry studies would help verify and enhance the relations between Sr:Ca signatures in water and lake sturgeon pectoral fin rays to further assess mixing of sturgeons between rivers.

Minnesota, Wisconsin↗