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Evidence and opportunities for integrating landscape ecology into natural resource planning across multiple-use landscapes

Enhancing natural resource management has been a focus of landscape ecology since its inception, but numerous authors argue that landscape ecology has not yet been effective in achieving the underlying goal of planning and designing sustainable landscapes. We developed nine questions reflecting the application of fundamental research topics in landscape ecology to the landscape planning process and reviewed two recent landscape-scale plans in western North America for evidence of these concepts in plan decisions. Both plans considered multiple resources, uses, and values, including energy development, recreation, conservation, and protection of cultural and historic resources. We found that land use change and multiscale perspectives of resource uses and values were very often apparent in planning decisions. Pattern-process relationships, connectivity and fragmentation, ecosystem services, landscape history, and climate change were reflected less frequently. Landscape sustainability was considered only once in the 295 decisions reviewed, and outputs of landscape models were not referenced. We suggest six actionable opportunities for further integrating landscape ecology concepts into landscape planning efforts: 1) use landscape sustainability as an overarching goal, 2) adopt a broad ecosystem services framework, 3) explore the role of landscape history more comprehensively, 4) regularly consider and accommodate potential effects of climate change, 5) use landscape models to support plan decisions, and 6) promote a greater presence of landscape ecologists within agencies that manage large land bases and encourage active involvement in agency planning efforts. Together these actions may improve the defensibility, durability, and sustainability of landscape plan decisions.

Current Landscape Ecology Reports↗

Hydrostratigraphic characterization of intergranular and secondary porosity in part of the Cambrian sandstone aquifer system of the cratonic interior of North America: Improving predictability of hydrogeologic properties

The Upper Cambrian interval of strata in the cratonic interior of North America has a long history of inconsistent hydrogeologic classification and a reputation for marked and unpredictable variability in hydraulic properties. We employed a hydrostratigraphic approach that requires hydraulic data to be interpreted within the context of a detailed characterization of the distribution of porosity and permeability to arrive at a better understanding of these rocks. As a first step, we constructed a framework of hydrostratigraphic attributes that is a depiction of the spatial distribution of both rock matrix and secondary porosity, independent of hydraulic data such as pumping-test results. The locations of hundreds of borehole geophysical logs and laboratory measurements of rock sample matrix porosity and permeability were mapped on detailed (mostly 1:100,000 or greater), conventional, lithostratigraphic maps. Stratigraphic cross-sections, based on hundreds of natural gamma logs and thousands of water-well records, have provided a markedly improved depiction of the regional distribution of rock matrix hydrostratigraphic components. Borehole, core and outcrop observations of secondary porosity were also tied to detailed stratigraphic sections and interpolated regionally. As a second step, we compiled and conducted a large number of hydraulic tests (e.g., packer tests and borehole flowmeter logs) and analyzed thousands of specific capacity tests (converted to hydraulic conductivity). Interpretation of these data within the context of the hydrostratigraphic attributes allowed us to produce a new hydrogeologic characterization for this stratigraphic interval and gain important insights into geologic controls on hydraulic variability. There are a number of assumptions in herent in most previous hydrogeologic investigations of these strata, such as equivalency of lithostratigraphic and hydrogeologic units and the dominance of intergranular flow in sandstone, that are not consistent with our results. A particularly important outcome of our study is recognition of regionally extensive bedding-plane fracture clusters. Such exceptionally high hydraulic conductivity features dominate the hydraulics of aquifers and confining units in these siliciclastic-dominated strata, including within intervals consisting largely of friable sandstone with high intergranular conductivity. Furthermore, our results provide some measure of fracture predictability, by correlating their abundance and hydraulic importance to specific stratigraphic positions and particular depths of burial beneath younger bedrock. A discrete, consistent stratigraphic interval of fine-grained siliciclastic beds also is apparently resistant to the development of vertically interconnected fractures, making the location of this regionally extensive confining unit predictable. Our more rigorous approach of interpreting typical hydraulic tests as well as relatively new techniques of borehole flowmeter logging, within the context of a hydrostratigraphic framework, results in improved definition of individual aquifers and confining units. It also enables quantification of their hydraulic properties, which leads to improved prediction of groundwater flow paths and time-of-travel. ?? 2005 Elsevier B.V. All rights reserved.

Sedimentary Geology↗

Atlantic circulation change still uncertain

Deep oceanic overturning circulation in the Atlantic (Atlantic Meridional Overturning Circulation (AMOC)) is projected to decrease in the future in response to anthropogenic warming. Caesar et al. 1 argue that an AMOC slowdown started in the nineteenth century and intensified during the mid-twentieth century. Although the argument and selected evidence proposed have some merits, we find that their conclusions might be different if a more complete array of data available in the North Atlantic region is considered. We argue that the strength of AMOC over recent centuries is still poorly constrained and the expected slowdown may not have started yet. Recently, Moffa-Sánchez et al. 2 compiled a comprehensive set of palaeoclimate proxy data from the North Atlantic and Arctic regions using objective criteria to identify high-quality datasets of ocean conditions that span the past two millennia (Fig. 1). Although no direct (singular) proxy for AMOC exists, the palaeoceanographic proxy data compiled by Moffa-Sánchez et al. 2 highlight the spatial and temporal complexities of the ocean state in modern times and the recent past. When all the available proxy records potentially related to AMOC variability and twentieth century observational datasets are considered, the time history of the AMOC system becomes less certain. In contrast, selecting only a subset of proxy records that share similar trends, as performed by Caesar et al. 1 , provides an incomplete perspective on AMOC changes through time.

Atlantic Ocean↗

Atlas of the Breeding Birds of Maryland and the District of Columbia

This was the result of a 5-year cooperative study with the Maryland Ornithological Society and the Maryland Department of Natural Resources. Each of Maryland's 1,256 5-km (25 sq km) blocks was surveyed for breeding birds using the standard categories of Possible, Probable, and Confirmed breeding. Special features include: (1) coverage of all blocks instead of a random sample; (2) one-third of the state (including the most rapidly changing counties) was covered in quarterblocks (2.5 km on each side) to facilitate detecting future changes; (3) quantitative sampling (miniroutes) was completed in more than half the blocks; (4) a 2 percent statewide random sample of blocks was searched for about 30 hours each by Patuxent professionals to evaluate efficiency of coverage by the volunteers; (5) besides species maps for 1983-87, the atlas also includes distribution maps from the 1950s; (6) life history data are based largely on unpublished Maryland information.

Book↗

Mute swans and their Chesapeake Bay habitats: proceedings of a symposium

The symposium 'Mute Swans and their Chesapeake Bay Habitats,' held on June 7, 2001, provided a forum for biologists and managers to share research findings and management ideas concerning the exotic and invasive mute swan (Cygnus olar). This species has been increasing in population size and is considered by many to be a problem in regard to natural food resources in the Bay that are used by native waterfowl during the winter months. Other persons, however, feel that resource managers are attempting to create a problem to justify more killing of waterfowl by hunters. Some persons also believe that managers should focus on the larger issues causing the decline of native food resources, such as the unabated human population increase in the Bay watershed and in the immediate coastal areas of the Bay. The symposium, sponsored by the Wildfowl Trust of North America and the U.S. Geological Survey, provided the atmosphere for presentation of mute swan data and opinions in a collegial setting where discussion was welcomed and was often informative and enthusiastic. An interesting historic review of the swan in regard to the history of mankind was presented, followed by a discussion on the positive and negative effects of invasive species. Biologists from different parts of the continent discussed the population status of the species in several states in the east and in the Great Lakes area. Data on the food habits of this species were presented in regard to submerged aquatic vegetation, and an interesting discussion on the role that the food habits of Canada geese in regard to native vegetation was presented. Findings and recommendations of the Mute Swan Task Force were presented. Finally, a representative of the Friends of Animals gave a thought-provoking presentation in defense of the mute swan. The presentations, in general, provided the necessary information and recommendations to allow managers to proceed with management of this controversial species with new and valuable perspectives.

Maryland, Virginia↗

Global status of trout and char: Conservation challenges in the twenty-first century

Freshwater ecosystems are among the most threatened ecosystems in the world (Richter et al. 1997; Strayer and Dudgeon 2010), and freshwater fishes may now be the most threatened group of vertebrates (Ricciardi and Rasmussen 1999; Vorosmarty et al. 2010; Darwall and Freyhof 2016). Of the 7,300 freshwater fish species globally assessed by the International Union for Conservation of Nature (IUCN, www.iucnredlist.org) in 2013, nearly one of every three species was threatened with extinction (Darwall and Freyhof 2016). Growing pressures from a multitude of direct and indirect human stressors (e.g., habitat loss and degradation, pollution, invasive species, overexploitation, diversion or alteration of biological flows, climate change, and others) threaten the persistence of many freshwater fish species and entire aquatic communities around the globe (Limburg et al. 2011). This pattern is particularly true for salmonid fishes (family Salmonidae, subfamily Salmoninae, belonging to the genera Oncorhynchus, Salvelinus, Salmo, Hucho, Parahucho, Brachymystax, and Salvethymus). Salmonids are globally-distributed, coldwater taxa with life-cycles restricted entirely to freshwater ecosystems (typically referred to as trout and char), but also Atlantic and Pacific salmon with more complex anadromous life-histories.

Book chapter↗

Constraints on the sedimentation history of San Francisco Bay from 14C and 10Be

Industrialization and urbanization around San Francisco Bay as well as mining and agriculture in the watersheds of the Sacramento and San Joaquin rivers have profoundly modified sedimentation patterns throughout the estuary. We provide some constraints on the onset of these erosional disturbances with 10Be data for three sediment cores: two from Richardson Bay, a small embayment near the mouth of San Francisco Bay, and one from San Pablo Bay, mid-way between the river delta and the mouth. Comparison of pre-disturbance sediment accumulation determined from three 14C-dated mollusk shells in one Richardson Bay core with more recent conditions determined from the distribution of 210Pb and 234Th [Fuller, C.C., van Geen, A., Baskaran, M, Anima, R.J., 1999. Sediment chronology in San Francisco Bay, California, defined by 210Pb, 234Th, 239,240Pu.] shows that the accumulation rate increased by an order of magnitude at this particular site. All three cores from San Francisco Bay show subsurface maxima in 10Be concentrations ranging in magnitude from 170 to 520 x 106 atoms/g. The transient nature of the increased 10Be input suggests that deforestation and agricultural develop- ment caused basin-wide erosion of surface soils enriched in 10Be. probably before the turn of the century.

California↗

Physiological status of naturally reared juvenile spring chinook salmon in the Yakima River: Seasonal dynamics and changes associated with smolting

Two year-classes of juvenile spring chinook salmon Oncorhynchus tshawytscha from the Yakima River, Washington, were sampled from July (3-4 months postemergence) through May (yearling smolt out-migration). Physiological characters measured included liver glycogen, body lipid, gill Na+-K+ ATPase, plasma thyroxine (T4), and plasma insulin-like growth factor-I (IGF-I). Distinct physiological changes were found that corresponded to season. Summer and fall were characterized by relatively high body lipid and condition factor. Winter was characterized by decreases in body lipid, condition factor, and plasma hormones. An increase in condition factor and body lipid was found in February and March. Finally, April and May were characterized by dramatic changes characteristic of smolting, including increased gill Na+-K+ ATPase activity, plasma T4, and IGF-I and decreased condition factor, body lipid, and liver glycogen. These results create a physiological template for juvenile spring chinook salmon in the drainage that provides a baseline for comparison with other years, populations, and life history types. In addition, this baseline provides a standard for controlled laboratory experiments and a target for fish culturists who rear juvenile spring chinook salmon for release from conservation hatcheries. The implications of these results for juvenile chinook salmon ecology and life history are discussed.

Washington↗

Introduction to limnogeology: Progress, challenges, and opportunities: A tribute to Elizabeth Gierlowski-Kordesch

Elizabeth Gierlowski-Kordesch (1956–2016) was a leader and innovator in the specialty field of limnogeology since its beginnings in the late 1980s. Her excitement for field work and examining sediments was contagious, and she was always testing new research ideas. Beth would have been thrilled with the diversity of papers presented in the volume and the wide array of techniques used to determine the history, geochemistry, paleontology, and paleoclimate preserved in the sediments in basins that are located on every continent except Australia and Antarctica. She would also have been delighted that half the chapters were first authored by highly cited women scientists. Beth spent her career teaching, mentoring, conducting research with students and colleagues, and planning limnogeology conferences, books, and field trips. Her contributions span deep-time lakes from North and South America, Africa, Asia, and Europe, starting with her work on the Lower Jurassic East Berlin Formation where she conducted her Ph.D. research. Her work with Kerry Kelts at the University of Minnesota produced two books summarizing global lake research. These volumes are still used by many researchers, particularly as a starting point in their limnogeological studies. Her collaboration with Springer Nature® resulted in the series entitled Syntheses in Limnogeology , a publication that likely would not exist without her enthusiasm and perseverance. The papers in this second volume in the series describe a variety of Jurassic to modern lakes that range from fresh to hypersaline, shallow to deep, vary in size from <1 km 2 to 100s of km 2 , and are found in a number of tectonic settings. Various proxies, including microfossils and trace fossils and analyses of lacustrine sedimentology, stratigraphy, and stable isotopes are used to evaluate the sediment cores and stratigraphic sections to evaluate human and climate influences on the environment, the effects of tectonic, seismic, and volcanic activity, and variations in hydrology. The contributions in this volume reflect the diverse research that Beth conducted herself and we hope is a fitting honor to one of the founding scientists of Limnogeology.

Book chapter↗

Puerto Rican parrots and potential limitations of the metapopulation approach to species conservation

Population viability analyses for a number of endangered species have incorporated a metapopulation approach. The risk assessments of these viability analyses have indicated that some extant populations should be subdivided into numerous subgroups with exchange of individuals among them in order to reduce the chance of catastrophic loss of the species. However, routine application of a policy of extensive subdivision may have detrimental consequences for certain endangered species. We examine the Puerto Rican Parrot as a case history in which this policy is ill-advised. In 1989, a population viability analysis was conducted for the parrot. The document recommended subdivision of the existing small captive flock into three groups. One of these captive flocks would consist of individuals transferred to a multi-species facility in the continental United States. Subsequently, individuals from this facility would be exchanged with the insular captive population(s) and the relict wild flock. For two reasons, implementation of this recommendation might have led to serious repercussions. First, this parrot, like many endangered species, has gone through a genetic bottleneck and may have a heightened susceptibility to disease. Multi-species facilities are a high-risk environment favoring the transmission of pathogens, especially when the facilities are located outside the natural ranges of a particular species. Second, the parrot is a K-selected species for which mate selection is idiosyncratic. This type of species often proves difficult to breed in captivity in small groups. Part of the problem in mate selection may be reduced by a policy allowing frequent transfers of individuals among facilities, but such movements increase the chances of spreading disease in the metapopulation. Thus, population viability analyses need to acknowledge that proliferation of captive subgroups accompanied by exchanges of individuals can in themselves carry substantial risks that must be weighed against the presumed benefits of subdivision.

Puerto Rico↗

NEWTS1.0: Numerical model of coastal Erosion by Waves and Transgressive Scarps

Models of rocky-coast erosion help us understand the physical phenomena that control coastal morphology and evolution, infer the processes shaping coasts in remote environments, and evaluate risk from natural hazards and future climate change. Existing models, however, are highly complex, are computationally expensive, and depend on many input parameters; this limits our ability to explore planform erosion of rocky coasts over long timescales (thousands to millions of years) and over a range of conditions. In this paper, we present a simplified cellular model of coastline evolution in closed basins through uniform erosion and wave-driven erosion. Uniform erosion is modeled as a constant rate of retreat. Wave erosion is modeled as a function of fetch, the distance over which the wind blows to generate waves, and the angle between the incident wave and the shoreline. This reduced-complexity model can be used to evaluate how a detachment-limited coastal landscape reflects climate, sea-level history, material properties, and the relative influence of different erosional processes.

Geoscientific Model Development↗

Geologic model for the assessment of undiscovered hydrocarbons in Lower to Upper Cretaceous carbonate rocks of the Fredericksburg and Washita groups, U.S. Gulf Coast Region

As part of the assessment of undiscovered oil and gas resources in Jurassic and Cretaceous strata of the U.S. Gulf Coast in 2010, the U.S. Geological Survey assessed carbonate rocks of the Fredericksburg and Washita groups and their equivalent units underlying onshore lands and State waters. One conventional assessment unit extending from south Texas to the Florida panhandle was defined: the Fredericksburg-Buda Carbonate Platform-Reef Gas and Oil assessment unit. Assessed strata range in age from Early Cretaceous Albian to Late Cretaceous Cenomanian. The assessment was based on a geologic model that incorporated the Upper Jurassic–Cretaceous–Tertiary Composite Total Petroleum System of the Gulf of Mexico Basin. The following factors were evaluated to define the assessment unit and estimate undiscovered oil and gas resources: potential source rocks, hydrocarbon migration, reservoir porosity and permeability, traps and seals, structural features, depositional framework, and potential for water washing of hydrocarbons near outcrop areas. Analysis of the production history of discovered reservoirs and well data within the assessment unit was also essential for estimating the numbers and sizes of undiscovered oil and gas reservoirs within the assessment unit. The downdip boundary of the assessment unit was drawn as an arbitrary line 10 miles downdip of the Lower Cretaceous shelf margin, to include potential reef-talus reservoirs, a facies described in the geologic model developed for the assessment. Updip boundaries of the assessment unit were drawn based on the updip extent of assessment unit carbonate reservoir rocks, basin margin fault zones, and (or) the presence of producing wells within the assessed interval. Using the U.S. Geological Survey methodology, mean undiscovered resources of 40 million barrels of oil, 622 billion cubic feet of gas, and 14 million barrels of natural gas liquids were estimated for the assessment unit.

U.S. Gulf Coast↗

Interaction of tectonic and depositional processes that control the evolution of the Iberian Gulf of Cadiz margin

This study provides an integrated view of the growth patterns and factors that controlled the evolution of the Gulf of Cadiz continental margin based on studies of the tectonic, sedimentologic and oceanographic history of the area. Seven sedimentary regimes are identified, but there are more extensive descriptions of the late Cenozoic regimes because of the larger data base. The regimes of the Mesozoic passive margin include carbonate platforms, which become mixed calcareous-terrigenous deposits during the Late Cretaceous-early Tertiary. The Oligocene and Early Miocene terrigenous regimes developed, in contrast, over the active and transcurrent margins near the African-Iberian plate boundary. The top of the Gulf of Cadiz olistostrome, emplaced in the Late Miocene, is used as a key horizon to define the 'post-orogenic' depositional regimes. The Late Miocene progradational margin regime is characterized by a large terrigenous sediment supply to the margin and coincides with the closing of the Miocene Atlantic-Mediterranean gateways. The terrigenous drift depositional regime of the Early Pliocene resulted from the occurrence of high eustatic sea level and the characteristics of the Mediterranean outflow currents that developed after the opening of the Strait of Gibraltar. The Late Pliocene and Quaternary regimes are dominated by sequences of deposits related to cycles of high and low sea levels. Deposition of shelf-margin deltas and slope wedges correlate with regressive and low sea level regimes caused by eustasy and subsidence. During the highstand regimes of the Holocene, inner shelf prograding deltas and deep-water sediment drifts were developed under the influence of the Atlantic inflow and Mediterranean outflow currents, respectively. A modern human cultural regime began 2000 years ago with the Roman occupation of Iberia; human cultural effects on sedimentary regimes may have equalled natural factors such as climate change. Interplay of tectonic and oceanographic controls dominated the evolution of the Cadiz margin during the Cenozoic. Depositional sequences formed where the tectonic setting provided the accommodation space and the shape of the deposits has been greatly influenced by the strong unidirectional Atlantic inflow currents on the shelf and Mediterranean outflow currents on the slope. The entire cycle of the inflow and outflow deposition along the margin has been controlled first by the tectonic evolution of the Betic and Rif gateways, which become closed during the Late Miocene, and after the Messinian by the opening of the Strait of Gibraltar. Strong current development during eustatic sea level highstands of the Pliocene and Quaternary has controlled deposition because of maximum sill depths at Gibraltar for water circulation. Lowstand sea levels slowed circulation and resulted in mud drapes over the slope and regressive stratigraphic sequences over the shelf. More recently, the human industrial revolution has caused heavy metal contamination of sediment and water over the Cadiz margin. Human activity also has affected sedimentation rates because of deforestation that caused increased depositional rates near undammed rivers and decreased rates where rivers have been dammed. Future research efforts will need to focus on: (1) the effect of increased Mediterranean outflow caused by river damming plus global warming and the increased outflow as a potential trigger for new ice ages; (2) assessments of geologic hazards for planning man-made shoreline structures, developing offshore petroleum resources and maintaining undersea communications cables; and (3) confirmation of the general geologic history of the Cadiz margin.

Marine Geology↗

Ecological impacts of winter water level drawdowns on lake littoral zones: A review

Freshwater littoral zones harbor diverse ecological communities and serve numerous ecosystem functions that are controlled, in part, by natural water level fluctuations. However, human alteration of lake hydrologic regimes beyond natural fluctuations threaten littoral zone ecological integrity. One type of hydrologic alteration in lakes is winter water level drawdowns, which are frequently employed for hydropower, flood control, and macrophyte control, among other purposes. Here, we synthesize the abiotic and biotic responses to annual and novel winter water level drawdowns in littoral zones of lakes and reservoirs. The dewatering, freezing, and increased erosion of exposed lakebeds drive changes in the littoral zone. Shoreline-specific physicochemical conditions such as littoral slope and shoreline exposure further induce modifications. Loss of fine sediment decreases nutrient availability over time, but desiccation may promote a temporary nutrient pulse upon re-inundation. Annual winter drawdowns can decrease taxonomic richness of macrophytes and benthic invertebrates and shift assemblage composition to favor taxa with r-selected life history strategies and with functional traits resistant to direct and indirect drawdown effects. Fish assemblages, though less directly affected by winter drawdowns (except where there is critically low dissolved oxygen), experience negative effects via indirect pathways like decreased food resources and spawning habitat. We identify eight general research gaps to guide future research that could improve our understanding about the complex effects of winter drawdowns on littoral zone ecology.

Aquatic Sciences↗

Germination and establishment of the native plains cottonwood ( Populus deltoides Marshall subsp. monilifera ) and the exotic Russian-olive ( Elaeagnus angustifolia L.)

Russian-olive ( Elaeagnus angustifolia ) is a small Eurasian tree that has escaped from cultivation and become naturalized, primarily along watercourses throughout the western United States. We examined germination and establishment of Russian-olive and plains cottonwood ( Populus deltoides ), the principal native riparian tree of the Great Plains, under a range of experimental moisture and light conditions. The fewest seedings established under the driest conditions; seedling biomass was predictably lower in the shade; root-to-shoot ratios were higher for cottonwood, higher in the sun, and higher under drier conditions. Several interactions were also significant. The timing of germination and mortality varied between plains cottonwood and Russian-olive: cottonwood germinated in mid-June in all treatments in a single pulse with subsequent mortality; the timing and amount of Russian-olive germination differed substantially across treatments with little net mortality. Differences in life-history traits of these species, including seed size, viability, and dispersal, help explain treatment differences. Russian-olive will likely remain an important component of riparian communities along both unregulated and regulated western rivers because it succeeds under conditions optimal for cottonwood establishment and under many conditions unfavorable for cottonwood. Furthermore, many western states still encourage planting of Russian-olive, and control techniques tend to be labor-intensive and expensive .

Conservation Biology↗

U.S. Geological Survey science vision for native freshwater mussel research in the United States

Executive Summary North America is a global center for native freshwater mussel (order Unionida, hereinafter “mussels”) diversity, with more than 350 species. Mussels are among the most imperiled fauna on the planet. Reasons for both local and widespread declines in mussels are mostly unknown, although the threats may include habitat loss and fragmentation, diseases, environmental contaminants, altered flow regimes, migration barriers to larval hosts, non-native species, and climate change. Over the past three decades, research on mussels has been substantial. Nevertheless, current conservation and management efforts are limited by significant information gaps. For example, the effects of emerging stressors on mussels are largely unknown and identifying when habitats are rehabilitated and suitable for reestablishment of mussels remains challenging. Additionally, historical and current information on the distribution, taxonomy, and life histories are often unreliable or lacking altogether, and more reliable information is needed for many species. We identified focal research themes, goals, and objectives where research on mussels is needed based on information gaps identified through conversations with resource partners across local, regional, and national organizations. Research on biodiversity seeks to enhance the diversity of mussel species and populations to support healthy aquatic ecosystems. Research on emerging stressors seeks to improve the understanding of how mussel species, populations, and communities respond to emerging stressors, including environmental contaminants and climate change. Research on conservation seeks to enhance the recovery of species and populations and to identify data gaps limiting the conservation of mussels and their habitats. Mussels are in urgent need of proactive conservation because they are an integral part of our natural heritage, enhance biodiversity, and provide vital ecological services that support freshwater ecosystems. The U.S. Geological Survey (USGS) has been, and continues to be, a leader in mussel research. Although the USGS is well suited to address the broad-scale multidisciplinary research needed to conserve mussels, the USGS has had substantial loss of scientists with mussel expertise over the past 20 years. However, the breadth of the USGS expertise on mussels can be leveraged internally across other USGS mission and program areas and externally across research partners. Given the breadth and scope of the issues facing mussels across the United States, the research themes outlined in this science vision can only be accomplished through extensive collaborations between the USGS and the full spectrum of natural resource partners, including other Federal and State agencies, Tribal organizations, universities, industries, and nongovernmental organizations.

Circular↗

Restricted gene flow between resident Oncorhynchus mykiss and an admixed population of anadromous steelhead

The species Oncorhynchus mykiss is characterized by a complex life history that presents a significant challenge for population monitoring and conservation management. Many factors contribute to genetic variation in O. mykiss populations, including sympatry among migratory phenotypes, habitat heterogeneity, hatchery introgression, and immigration (stray) rates. The relative influences of these and other factors are contingent on characteristics of the local environment. The Rock Creek subbasin in the middle Columbia River has no history of hatchery supplementation and no dams or artificial barriers. Limited intervention and minimal management have led to a dearth of information regarding the genetic distinctiveness of the extant O. mykiss population in Rock Creek and its tributaries. We used 192 SNP markers and collections sampled over a 5‐year period to evaluate the temporal and spatial genetic structures of O. mykiss between upper and lower watersheds of the Rock Creek subbasin. We investigated potential limits to gene flow within the lower watershed where the stream is fragmented by seasonally dry stretches of streambed, and between upper and lower watershed regions. We found minor genetic differentiation within the lower watershed occupied by anadromous steelhead ( F ST = 0.004), and evidence that immigrant influences were prevalent and ubiquitous. Populations in the upper watershed above partial natural barriers were highly distinct ( F ST = 0.093) and minimally impacted by apparent introgression. Genetic structure between watersheds paralleled differences in local demographics (e.g., variation in size), migratory restrictions, and habitat discontinuity. The evidence of restricted gene flow between putative remnant resident populations in the upper watershed and the admixed anadromous population in the lower watershed has implications for local steelhead productivity and regional conservation.

Washington↗

Seasonal sediment dynamics shape temperate bedrock reef communities

Mobilized seafloor sediment can impact benthic reef communities through burial, scour, and turbidity. These processes are ubiquitous in coastal oceans and, through their influence on the survival, fitness, and interactions of species, can alter the structure and function of benthic communities. In northern Monterey Bay, California, USA, as much as 30% of the seafloor is buried or exposed seasonally, making this an ideal location to test how subtidal temperate rocky reef communities vary in the presence and absence of chronic sediment-based disturbances. Designated dynamic plots were naturally inundated by sediment in summer (50 to 100% cover) and swept clean in winter, whereas designated stable plots remained free of sediment during our study. Multivariate analyses indicated significant differences in the structure of sessile and mobile communities between dynamic and stable reef habitats. For sessile species, community structure in disturbed plots was less variable in space and time than in stable plots due to the maintenance of an early successional state. In contrast, community structure of mobile species varied more in disturbed plots than in stable plots, reflecting how mobile species distribute in response to sediment dynamics. Some species were found only in these disturbed areas, suggesting that the spatial mosaic of disturbance could increase regional diversity. We discuss how the relative ability of species to tolerate disturbance at different life history stages and their ability to colonize habitat translate into community-level differences among habitats, and how this response varies between mobile and sessile communities.

California↗