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USGS2017

When perception reflects reality: Non-native grass invasion alters small mammal risk landscapes and survival

Modification of habitat structure due to invasive plants can alter the risk landscape for wildlife by, for example, changing the quality or availability of refuge habitat. Whether perceived risk corresponds with actual fitness outcomes, however, remains an important open question. We simultaneously measured how habitat changes due to a common invasive grass (cheatgrass, Bromus tectorum ) affected the perceived risk, habitat selection, and apparent survival of a small mammal, enabling us to assess how well perceived risk influenced important behaviors and reflected actual risk. We measured perceived risk by nocturnal rodents using a giving-up density foraging experiment with paired shrub (safe) and open (risky) foraging trays in cheatgrass and native habitats. We also evaluated microhabitat selection across a cheatgrass gradient as an additional assay of perceived risk and behavioral responses for deer mice ( Peromyscus maniculatus ) at two spatial scales of habitat availability. Finally, we used mark-recapture analysis to quantify deer mouse apparent survival across a cheatgrass gradient while accounting for detection probability and other habitat features. In the foraging experiment, shrubs were more important as protective cover in cheatgrass-dominated habitats, suggesting that cheatgrass increased perceived predation risk. Additionally, deer mice avoided cheatgrass and selected shrubs, and marginally avoided native grass, at two spatial scales. Deer mouse apparent survival varied with a cheatgrass–shrub interaction, corresponding with our foraging experiment results, and providing a rare example of a native plant mediating the effects of an invasive plant on wildlife. By synthesizing the results of three individual lines of evidence (foraging behavior, habitat selection, and apparent survival), we provide a rare example of linkage between behavioral responses of animals indicative of perceived predation risk and actual fitness outcomes. Moreover, our results suggest that exotic grass invasions can influence wildlife populations by altering risk landscapes and survival.

Wyoming↗

USGS1993

Effect of organic loading on nitrification and denitrification in a marine sediment microcosm

The effects of organic additions on nitrification and denitrification were examined in sediment microcosms. The organic material, heat killed yeast, had a C/N ratio of 7.5 and was added to sieved, homogenized sediments. Four treatments were compared: no addition (control, 30 g dry weight (dw) m-2 mixed throughout the 10 cm sediment column (30 M), 100 g dw m-2 mixed throughout sediments (100M), and 100 g dw m-2 mixed into top 1 cm (100S). After the microcosms had been established for 7-11 days, depth of O2 penetration, sediment-water fluxes and nitrification rates were measured. Nitrification rates were measured using three different techniques: N-serve and acetylene inhibition in intact cores, and nitrification potentials in slurries. Increased organic additions decreased O2 penetration from 2.7 to 0.2 mm while increasing both O2 consumption, from 30 to 70 mmol O2 m-2 d-1, and NO3- flux into sediments. Nitrification rates in intact cores were similar for the two methods. Highest rates occurred in the 30 M treatment, while the lowest rate was measured in the 100S treatment. Total denitrification rates (estimated from nitrification and nitrate fluxes) increased with increased organic addition, because of the high concentrations of NO3- (40 ??M) in the overlying water. The ratio of nitrification: denitrification was used as an indication of the importance of nitrification as the NO3- supply for denitrification. This ratio decreased from 1.55 to 0.05 with increased organic addition.

FEMS Microbiology Ecology↗

USGS2021

Fire frequency impacts soil properties and processes in sagebrush steppe ecosystems of the Columbia Basin

Increased fire frequency in semi-arid ecosystems can alter biochemical soil properties and soil processes that underpin ecosystem structure and functioning, thus threatening native plant communities and the species that rely on them. However, there is much uncertainty about the magnitude of change as soils are exposed to more fires, because soil recovery and changes in fire severity following a first fire mediate the impact of successive fires on soil properties. With this study we aim to evaluate how increased fire frequency affects soil biochemical properties (i.e. soil pH, soil organic matter (SOM), soil organic carbon (SOC), soil structure and mineral N) and processes (i.e. microbial and enzymatic activity) in a sagebrush-steppe ecosystem located in the Columbia Plateau Ecoregion, Washington, USA. During 2016, we collected soils from once (2012), twice (2003 and 2012), and thrice (2003, 2007, and 2012) burned areas, enabling us to test the hypothesis that increasing fire frequency will exacerbate the impact of fire on soil properties and processes. Our study yielded three main results: (1) fire reduced the total soil C concentration and soil C in aggregates relative to unburned soil, but only when soil was exposed to fire once (i.e. the most recent fire), (2) compared to the unburned soils, SOM contents, enzyme activity and microbial CO 2 respiration were suppressed in the once and thrice burned soils, but not in the twice burned soils, and (3) fire increased NO 3 − -N contents across the once and twice burned sites, and reduced enzyme activity associated with N cycling in the thrice burned sites. Taken together, our findings suggest that a one-time fire in this shrub dominated semi-arid ecosystem significantly changes soil biochemical attributes and microbially driven processes. With sufficient time between fires, these structural and functional properties can partially recover, and this may persist even after a second fire, but recovery is limited when a third fire creates an additional disturbance at a shorter time interval. Furthermore, while soil C pools and microbial decomposition processes were able to recover with sufficient time, greater soil resource availability prevailed in soil across all fire frequencies, indicating that fire is likely to promote invasion and reduce ecosystem stability, even when other soil properties recover.

Washington↗

USGS2025

Breaking down Palila decline: Assessing the role of drought and vegetation health in the population loss of an endangered Hawaiian honeycreeper

The Palila ( Loxioides bailleui ), the last member of the once speciose finch-billed Hawaiian honeycreeper clade (Drepanidinae) in the main Hawaiian Islands, faces critical conservation challenges as an endangered species. Understanding the drivers of its decline is essential for effective management. We used additive decomposition models to examine temporal trends in climatic variables (temperature, precipitation, drought) and Normalized Difference Vegetation Index (NDVI), a vegetation health metric hypothesized to be associated with long-term trends in Palila abundance at landscape (250 m) scales on the Island of Hawai'i. A breakpoint analysis identified 2005–2009 as critical years of Palila decline. Vegetation health metrics at the 250 m scale lined up well both spatially and temporally with trends in Palila declines, with a significant browning from January 2004 to January 2014. Given the strong correlation between vegetation health and drought metrics at the landscape scale (r = 0.75, p < 0.001), NDVI changes appeared driven by drought. To enable the future projection of habitat quality in this area, we explored a stepwise linear regression to explain the variation in MODIS NDVI in recent years. We found that 87 % of the variability in NDVI can be explained by wet season precipitation and vapor pressure deficit from the previous dry season. The model is largely driven by a strong positive correlation between wet season precipitation and NDVI (r = 0.72, adjusted p < 0.001). Areas that maintained a low likelihood of NDVI decline throughout the time series and experienced increases in predicted Palila count represent potential drought microrefugia for the species. This higher elevation microrefugia is likely resilient against decreases in wet season precipitation through supplemental water retention from fog drip. While NDVI rebounded after 2014, Palila have not recovered. Our analysis highlights the importance of trend decomposition for monitoring endangered species with limited rebound potential due to small population dynamics and indicate continued warm, dry conditions may prevent Palila recovery without intervention.

Hawaii↗

USGS2008

Effects of disturbance on germination and seedling establishment in a coastal prairie grassland: A test of the competitive release hypothesis

1. We evaluated the responses of native grassland sods to a variety of types of disturbance in order to assess hypotheses about the competitive effects of established vegetation on seed germination and seedling establishment. In particular, we consider whether germination is more responsive to the magnitude and duration of vegetation removal (competitive release) or to individual disturbance types (specific effects). 2. Field-collected sods of coastal tallgrass prairie were subjected to no manipulation, cutting with clippings left, cutting with clippings removed (hayed), burning, and complete destruction of established vegetation under greenhouse conditions. The emergence and fate of seedlings, as well as light penetration through the canopy, were followed for a period of 4.5 months. 3. Total seedling emergence increased from cut to control, hayed, burned and plants-removed treatments. Several periods of increased seedling emergence suggested responses to both light penetration and seasonal change. 4. Species richness was lowest in cut sods and highest in sods that had plants removed or were burned. Rarefaction analysis showed that these differences were largely those expected from differences in seedling number, except for the cut treatment, which produced fewer species per seedling than other treatments. 5. Indicator species analysis and ordination methods revealed that seedling community composition overlapped strongly across all treatments, although the area of ordination space did increase with increasing numbers of seedlings. 6. Overall, most of the effects of disturbance could be explained by cumulative light penetration to the soil surface, an indicator of total competitive release, although a few specific effects could be found (particularly for the cutting treatment). Thus, these results generally support the competitive release hypothesis.

Journal of Ecology↗

USGS2018

Effects of sea lamprey substrate modification and carcass nutrients on macroinvertebrate assemblages in a small Atlantic coastal stream

Aquatic macroinvertebrates respond to patch dynamics arising from interactions of physical and chemical disturbances across space and time. Anadromous fish, such as sea lamprey, Petromyzon marinus , migrate from the ocean and alter physical and chemical properties of recipient spawning streams. Sea lamprey disturb stream benthos physically through nest construction and spawning, and enrich food webs through nutrient deposition from decomposing carcasses. Sea lamprey spawning nests support greater macroinvertebrate abundance than adjacent reference areas, but concurrent effects of stream bed modification and nutrient supplementation have not been examined sequentially. We added carcasses and cleared substrate experimentally to mimic the physical disturbance and nutrient enrichment associated with lamprey spawning, and characterized effects on macroinvertebrate assemblage structure. We found that areas receiving cleared substrate and carcass nutrients were colonized largely by Simuliidae compared to upstream and downstream control areas that were colonized largely by Hydropsychidae, Philopotamidae, and Chironomidae. Environmental factors such as stream flow likely shape assemblages by physically constraining macroinvertebrate establishment and feeding. Our results indicate potential changes in macroinvertebrate assemblages from the physical and chemical changes to streams brought by spawning populations of sea lamprey.

Maine↗

USGS2020

Successful restoration of Metrosideros polymorpha (ʻōhiʻa) is possible in forest sites with active Rapid ‘Ōhiʻa Death infections

Rapid ʻŌhiʻa Death (ROD), caused by the fungal pathogen Ceratocystis , is killing large numbers of ʻōhiʻa trees ( Metrosideros polymorpha ) in Hawaiʻi. ʻŌhiʻa are a dominant tree in Hawaiian forests, have a range that goes from arid to wet forest climates, and are important for endangered species habitat and ecosystem function. To test whether actively planting ʻōhiʻa seedlings is a viable restoration strategy in areas with high ROD mortality, we planted ʻōhiʻa in a ROD‐affected forest and crossed this with weeding and fencing treatments to compare ROD mortality to other stressors. We also tested for viable Ceratocystis spores in soils around planting areas. We found that seedlings were more likely to die in unweeded and unfenced treatments than controls. Although viable Ceratocystis spores were found in soil, none of the 41 dead seedlings tested positive for Ceratocystis . This indicates that competition from exotic plants and exotic feral ungulate damage are more likely to kill seedlings than ROD within the first year after planting.

Hawaii↗

USGS1996

Episodic acidification of small streams in the northeastern United States: Ionic controls of episodes

As part of the Episodic Response Project (ERP), we intensively monitored discharge and stream chemistry of 13 streams located in the Northern Appalachian region of Pennsylvania and in the Catskill and Adirondack Mountains of New York from fall 1988 to spring 1990. The ERP clearly documented the occurrence of acidic episodes with minimum episodic pH ≤ 5 and inorganic monomeric Al (Al im ) concentrations > 150 μg/L in at least two study streams in each region. Several streams consistently experienced episodes with maximum Al im concentrations >350 μg/L. Acid neutralizing capacity (ANC) depressions resulted from complex interactions of multiple ions. Base cation decreases often made the most important contributions to ANC depressions during episodes. Organic acid pulses were also important contributors to ANC depressions in the Adirondack streams, and to a lesser extent, in the Catskill and Pennsylvania streams. Nitrate concentrations were low in the Pennsylvania streams, whereas the Catskill and Adirondack study streams had high NO 3 - concentrations and large episodic pulses (≤ 54 μ eq/L). Most of the Pennsylvania study streams also frequently experienced episodic pulses of SO 4 2- (≤ 78 μ eq/L), whereas the Adirondack and Catskill streams did not. High baseline concentrations of SO 4 2- (all three study areas) and NO 3 - (Adirondacks and Catskills) reduced episodic minimum ANC, even when these ions did not change during episodes. The ion changes that controlled the most severe episodes (lowest minimum episodic ANC) differed from the ion changes most important to smaller, more frequent episodes. Pulses of NO 3 - (Catskills and Adirondacks), SO 4 2- (Pennsylvania), or organic acids became more important during major episodes. Overall, the behavior of streamwater SO 4 2- and NO 3 - is an indicator that acidic deposition has contributed to the severity of episodes in the study streams.

Ecological Applications↗

USGS2016

Impacts of the Deepwater Horizon oil spill on deep-sea coral-associated sediment communities

Cold-water corals support distinct populations of infauna within surrounding sediments that provide vital ecosystem functions and services in the deep sea. Yet due to their sedentary existence, infauna are vulnerable to perturbation and contaminant exposure because they are unable to escape disturbance events. While multiple deep-sea coral habitats were injured by the 2010 Deepwater Horizon (DWH) oil spill, the extent of adverse effects on coral-associated sediment communities is unknown. In 2011, sediments were collected adjacent to several coral habitats located 6 to 183 km from the wellhead in order to quantify the extent of impact of the DWH spill on infaunal communities. Higher variance in macrofaunal abundance and diversity, and different community structure (higher multivariate dispersion) were associated with elevated hydrocarbon concentrations and contaminants at sites closest to the wellhead (MC294, MC297, and MC344), consistent with impacts from the spill. In contrast, variance in meiofaunal diversity was not significantly related to distance from the wellhead and no other community metric (e.g. density or multivariate dispersion) was correlated with contaminants or hydrocarbon concentrations. Concentrations of polycyclic aromatic hydrocarbons (PAH) provided the best statistical explanation for observed macrofaunal community structure, while depth and presence of fine-grained mud best explained meiofaunal community patterns. Impacts associated with contaminants from the DWH spill resulted in a patchwork pattern of infaunal community composition, diversity, and abundance, highlighting the role of variability as an indicator of disturbance. These data represent a useful baseline for tracking post-spill recovery of these deep-sea communities.

Marine Ecology Progress Series↗

USGS2017

Using high-throughput DNA sequencing, genetic fingerprinting, and quantitative PCR as tools for monitoring bloom-forming and toxigenic cyanobacteria in Upper Klamath Lake, Oregon, 2013 and 2014

Monitoring the community structure and metabolic activities of cyanobacterial blooms in Upper Klamath Lake, Oregon, is critical to lake management because these blooms degrade water quality and produce toxic microcystins that are harmful to humans, domestic animals, and wildlife. Genetic tools, such as DNA fingerprinting by terminal restriction fragment length polymorphism (T-RFLP) analysis, high-throughput DNA sequencing (HTS), and real-time, quantitative polymerase chain reaction (qPCR), provide more sensitive and rapid assessments of bloom ecology than traditional techniques. The objectives of this study were (1) to characterize the microbial community at one site in Upper Klamath Lake and determine changes in the cyanobacterial community through time using T-RFLP and HTS in comparison with traditional light microscopy; (2) to determine relative abundances and changes in abundance over time of toxigenic Microcystis using qPCR; and (3) to determine relative abundances and changes in abundance over time of Aphanizomenon , Microcystis , and total cyanobacteria using qPCR. T-RFLP analysis of total cyanobacteria showed a dominance of only one or two distinct genotypes in samples from 2013, but results of HTS in 2013 and 2014 showed more variations in the bloom cycle that fit with the previous understanding of bloom dynamics in Upper Klamath Lake and indicated that potentially toxigenic Microcystis was more prevalent in 2014 than in years prior. The qPCR-estimated copy numbers of all target genes were higher in 2014 than in 2013, when microcystin concentrations also were higher. Total Microcystis density was shown with qPCR to be a better predictor of late-season increases in microcystin concentrations than the relative proportions of potentially toxigenic cells. In addition, qPCR targeting Aphanizomenon at one site in Upper Klamath Lake indicated a moderate bloom of this species (corresponding to chlorophyll a concentrations between approximately 75 and 200 micrograms per liter) from mid-June to mid-August, 2014. After August 18, the Aphanizomenon bloom was overtaken by Microcystis late in the season as microcystin concentrations peaked. Overall, results of this study showed how DNA-based, genetic methods may provide rapid and sensitive diagnoses for the presence of toxigenic cyanobacteria and that they are useful for general monitoring or ecological studies and identification of cyanobacterial community members in complex aquatic habitats. These same methods can also be used to simultaneously address spatial (horizontal and vertical) and temporal variation and under different conditions. Additionally, with some modifications, the same techniques can be applied to different sample types, including water, sediment, and tissue.

Oregon↗

USGS2016

Feeding ecology of the walleye (Percidae, Sander vitreus), a resurgent piscivore in Lake Huron (Laurentian Great Lakes) after shifts in the prey community

Recovering populations of piscivores can challenge understanding of ecosystem function due to impacts on prey and to potentially altered food webs supporting their production. Stocks of walleye (Percidae, Sander vitreus ), an apex predator in the Laurentian Great Lakes, crashed in the mid‐1900s. Management efforts led to recovery by 2009, but recovery coincided with environmental and fish community changes that also had implications for the feeding ecology of walleye. To evaluate potential changes in feeding ecology for this apex predator, we assessed diets in the main basin of Lake Huron and in Saginaw Bay, a large embayment of Lake Huron, during 2009–2011. Walleye switched their diets differently in the main basin and Saginaw Bay, with non‐native round goby (Gobiidae, Neogobius melanostomus ) and rainbow smelt (Osmeridae, Osmerus mordax ) more prevalent in diets in the main basin, and invertebrates, yellow perch (Percidae, Perca flavescens ) and gizzard shad (Clupeidae, Dorosoma cepedianum ) more prevalent in diets in the bay. Feeding strategy plots indicated that there was a high degree of individual specialisation by walleye in the bay and the main basin. Bioenergetic simulations indicated that walleye in Saginaw Bay need to consume 10%–18% more food than a walleye that spends part or all of the year in the main basin, respectively, in order to achieve the same growth rate. The differences in diets between the bay and main basin highlight the flexibility of this apex predator in the face of environmental changes, but changes in diet can alter energy pathways supporting piscivore production.

Ecology of Freshwater Fish↗

USGS2007

Quantifying the extent of river fragmentation by hydropower dams in the Sarapiquí River Basin, Costa Rica

Costa Rica has recently experienced a rapid proliferation of dams for hydropower on rivers draining its northern Caribbean slope. In the Sarapiquí River Basin, eight hydropower plants were built between 1990 and 1999 and more projects are either under construction or proposed. The majority of these dams are small (<15 m tall) and operate as water diversion projects. While the potential environmental effects of individual projects are evaluated prior to dam construction, there is a need for consideration of the basin-scale ecological consequences of hydropower development. This study was a first attempt to quantify the extent of river fragmentation by dams in the Sarapiquí River Basin. Using simple spatial analyses, the length of river upstream from dams and the length of de-watered reaches downstream from dams was measured. Results indicated that there are currently 306.8 km of river (9.4% of the network) upstream from eight existing dams in the Sarapiquí River Basin and 30.6 km of rivers (0.9% of the network) with significantly reduced flow downstream from dams. Rivers upstream from dams primarily drain two life zones: Premontane Rain Forest (107.9 km) and Lower Montane Rain Forest (168.2 km). Simple spatial analyses can be used as a predictive or planning tool for considering the effects of future dams in a basin-scale context. In the Sarapiquí River Basin, we recommend that future dam projects be constructed on already dammed rivers to minimize additional river fragmentation and to protect remaining riverine connectivity.

Aquatic Conservation: Marine and Freshwater Ecosys↗

USGS2023

The context dependency of fish-habitat associations in separated karst ecoregions

Fish populations may be isolated via natural conditions in geographically separated ecoregions. Although reconnecting these populations is not a management goal, we need to understand how these populations persist across landscapes to develop meaningful conservation actions, particularly for species occupying sensitive karst ecosystems. Our study objective was to determine the physicochemical factors related to the occurrence of four spring-associated fishes. Arbuckle Uplift and Ozark Highlands ecoregions, USA. We used a hierarchical approach to identify habitat relationships at multiple spatial scales. We collected detection data using snorkeling and seining. We examined the physicochemical relationships related to the detection and occurrence of four spring-associated fishes using occupancy modeling in a Bayesian framework. We found physicochemical relationships that differed and were similar between ecoregions for several fishes. For three species, we found different water temperature relationships between ecoregions. Smallmouth bass were ubiquitous in their use of drainage areas in the Ozark Highlands but only associated with the lower network of the Arbuckle Uplift. There were several mirrored relationships between ecoregions, including an interaction between residual pool depth and water temperature, where sites with deeper pools were more likely to be occupied during warmer water temperatures. There were single-species occurrence relationships with percent vegetation and percent agriculture. Lastly, snorkeling was a more efficient sampling method compared to seining for all fishes. Our results indicate stream temperature mitigation may be possible via the maintenance of key channel morphologies, and we identify shared stressors between ecoregions. Channel mitigation to maintain reaches with deeper pools may be an important strategy for maintaining thermal refugia, particularly when considering climate change. Identifying the mechanistic underpinning of other multiscale ecological relationships would be helpful to discern if some of the different ecoregion relationships represent warning signals or interactions with unmeasured biotic or abiotic factors.

Oklahoma↗

USGS2022

Hawaiian waterbird movement across a developed landscape

A key component for biologists managing mobile species is understanding where and when a species occurs at different locations and scaling management to fit the spatial and temporal patterns of movement. We established an automated radio-telemetry tracking network to document multi-year movement in 2016–2018 of 3 endangered waterbirds among wetlands on Oʻahu, Hawaiʻi, USA: ʻalae ʻula or Hawaiian gallinule (gallinule; Gallinula galeata sandvicensis ), ʻalae keʻokeʻo or Hawaiian coot (coot; Fulica alai ), and aeʻo or Hawaiian stilt (stilt; Himantopus mexicanus knudseni ), each with different ecological requirements. There were marked differences in the movement propensity of the species, with no movement among sites detected in gallinules, 31% of coots moving among wetlands, and very high levels of daily movement in stilts. A network analysis revealed strong evidence for fidelity among individual stilts to specific wetlands, indicating different groups of wetlands supported different birds. There was also strong evidence for patterns in daily and seasonal movement patterns of stilts. Our work indicates the importance of each wetland to the waterbirds they support, as each individual had strong fidelity to a single wetland. In addition, for Hawaiian coots and stilts, which were documented moving among multiple wetlands, a network of wetlands may be key for long-term persistence of these endangered species, and coordinated regional management of waterbirds as a shared resource could provide greater benefits to waterbirds than independent management of each wetland.

Hawaii↗

USGS2025

Discharge and nutrients interact to determine trophic structure in a wetland: Evidence from a landscape-scale manipulation

Identifying drivers of consumer biomass patterns and community structure is complex for managed freshwater ecosystems that are sensitive to nutrients and drought. In the Florida Everglades, flow restoration is expected to reintroduce discharge across an expansive wetland, yet most research on consumers has focused on water depth and dry disturbances. Low-velocity flow can mediate nutrient availability for basal food resources, but its scaled-up effects on consumer communities remain largely untested. We quantified consumer responses to a landscape-scale flow manipulation that created discharge variability along a 2.5-km path of interconnected shallow sloughs. Over 4 yr, we repeatedly sampled macroinvertebrates, small fishes, and large predatory fishes (standard length > 8 cm) in 26 sloughs—some along a flow path experiencing pulsed water releases and others in two non-flowing reference areas. We tested the effects of antecedent discharge on consumer biomass while accounting for local nutrient concentrations (total phosphorus). Discharge increased biomass across all consumer groups, particularly in oligotrophic sloughs. Conversely, eutrophic sloughs demonstrated stronger top-down effects on small fishes and macroinvertebrates, with discharge primarily benefiting large predatory fishes. Nutrient gradients preferentially increased large fishes and caused macroinvertebrate community shifts favoring herbivorous and possibly predation-resistant taxa. Structural equation modeling similarly indicated bottom-up support from discharge but stronger top-down control in nutrient-rich sloughs. These findings demonstrate that discharge and total phosphorus interactively produce distinct consumer biomass patterns. Flow restoration in oligotrophic Everglades sloughs is hypothesized to enhance aquatic consumer biomass across trophic levels, revealing an ecological benefit to slow-flowing ecosystems not previously recognized.

Florida↗

USGS2011

Effects of grade control structures on fish passage, biological assemblages, and hydraulic environments in western Iowa streams: a multidisciplinary review

Land use changes and channelization of streams in the deep loess region of western Iowa have led to stream channel incision, altered flow regimes, increased sediment inputs, decreased habitat diversity and reduced lateral connectivity of streams and floodplains. Grade control structures (GCSs) are built in streams to prevent further erosion, protect infrastructure and reduce sediment loads. However, GCS can have a detrimental impact on fisheries and biological communities. We review three complementary biological and hydraulic studies on the effects of GCS in these streams. GCS with steep (≥1:4 rise : run) downstream slopes severely limited fish passage, but GCS with gentle slopes (≤1:15) allowed greater passage. Fish assemblages were dominated by species tolerant of degradation, and Index of Biotic Integrity (IBI) scores were indicative of fair or poor biotic integrity. More than 50% of fish species had truncated distributions. After modification of GCS to reduce slopes and permit increased passage, IBI scores increased and several species were detected further upstream than before modification. Total macroinvertebrate density, biomass and taxonomic diversity and abundance of ecologically sensitive taxa were greater at GCS than in reaches immediately upstream, downstream or ≥1 km from GCS. A hydraulic study confirmed results from fish passage studies; minimum depths and maximum current velocities at GCS with gentle slopes (≤1:15) were more likely to meet minimum criteria for catfish passage than GCS with steeper slopes. Multidisciplinary approaches such as ours will increase understanding of GCS-associated factors influencing fish passage, biological assemblage structure and other ecological relationships in streams.

Iowa↗

USGS2011

Baseline ecological risk assessment of the Calcasieu Estuary, Louisiana: 3. An evaluation of the risks to benthic invertebrates associated with exposure to contaminated sediments

The sediments in the Calcasieu Estuary are contaminated with a wide variety of chemicals of potential concern (COPCs), including heavy metals, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, phthalates, chlorinated benzenes, and polychlorinated dibenzo-p-dioxins and dibenzofurans. The sources of these COPCs include both point and non-point source discharges. As part of a baseline ecological risk assessment, the risks to benthic invertebrates posed by exposure to sediment-associated COPCs were assessed using five lines of evidence, including whole-sediment chemistry, pore-water chemistry, whole-sediment toxicity, pore-water toxicity, and benthic invertebrate community structure. The results of this assessment indicated that exposure to whole sediments and/or pore water from the Calcasieu Estuary generally posed low risks to benthic invertebrate communities (i.e., risks were classified as low for 68% of the sampling locations investigated). However, incremental risks to benthic invertebrates (i.e., compared with those associated with exposure to conditions in reference areas) were indicated for 32% of the sampling locations within the estuary. Of the three areas of concern (AOCs) investigated, the risks to benthic invertebrates were highest in the Bayou d'Inde AOC; risks were generally lower in the Upper Calcasieu River AOC and Middle Calcasieu River AOC. The areas showing the highest risks to sediment-dwelling organisms were generally located in the vicinity of point source discharges of COPCs. These results provided risk managers with the information required to make decisions regarding the need for remedial actions at the site.

Louisiana↗

USGS2023

Species and physiographic factors drive Indian cucumber root and Canada mayflower plant chemistry: Implications for white-tailed deer forage quality

Nutrition is fundamental to white-tailed deer ( Odocoileus virginianus ) management given its relationship to habitat carrying capacity and population productivity. Ecological Sites (ESs) are a United States federal landscape management unit of specific land potential due to unique soils, topography, climate, parent material, and perhaps deer forage nutritional value. We present results of a study that extends the use of ESs to inform white-tailed deer management by evaluating indicator plant chemistry in two spring forb species, Indian cucumber root ( Medeola virginiana) and Canada mayflower ( Maianthemum canadense ), across the northcentral Appalachians. We sampled spring forbs and underlying soils across two ESs: Dry, upland, oak–maple–hemlock hardwood forest (OMH) and Deep soil, high slope, northern hardwood forests (NHF). Plant elemental content, soil pH, and site aspect, slope and elevation were measured. Our results show that forb chemistry differs between species and within a species geographically. Indian cucumber root, as compared to Canada mayflower, has significantly higher Mg, Na, Cu, Fe, and Zn, and lower Mn. Canada mayflower in the NHF ES, versus OMH ES, was found to have significantly higher K, Mn, and B. Indian cucumber root in the NHF ES, versus the OMH ES, was found to have significantly higher Mg, Al, Fe, and Ca:P ratio but lower K. Linear discriminant analysis shows that plant tissue Mn was the best discriminator between species, and between ESs, Canada mayflower plant tissue Mn and Indian cucumber plant tissue P, K, Ca, Mg and Mn were best discriminators. Given that nutrition determines habitat carrying capacity, differences in forage nutrition between ESs may have different potentials to support deer. Forage nutrition is an important aspect of deer habitat conditions and carrying capacity, thus ESs are likely to support deer populations with different growth potential, which means that even if the same plant species occur in different ESs their nutritional value to deer may differ.

Journal of Environmental Management↗