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At least 1,135 records · Page 63Linked to original sources

Miocene mammals and Central American seaways

The presence of Miocene mammals of North American affinity in the Panama Canal Zone indicates that Central America was attached to North America. That this attachment was a broad and stable land mass is shown by the close relation of the Panama Miocene herbivores to the widely distributed Miocene herbivore fauna of North America. A continuous connection existed probably throughout the Tertiary, to the west and north of the isthmian region, but the tectonically active isthmus probably was broken up into an archipelago during most of Tertiary time. Between the islands ran the Strait of Panama; from time to time parts of the isthmian area were connected to the stable land to the west, allowing eastward migration of land animals. The mammals of North American affinity in the Cucaracha Formation were found only a few kilometers from the western end of the San Blas Area, a stable land mass in eastern Panama that was separated from South America by the Bolivar Trough during most of the interval between Oligocene and Pliocene time. The Strait of Panama was a less stable barrier than the Bolivar Trough; this being so, it is likely that the San Blas Area was inhabited by land animals of North American rather than South American affinity. Thus, the disappearance of the Bolivar seaway in Pliocene time would have allowed, probably for the first time, mingling of the North and South American mammal faunas.

Panama Canal↗

Influences of dietary uptake and reactive sulfides on metal bioavailability from aquatic sediments

Understanding how animals are exposed to the large repository of metal pollutants in aquatic sediments is complicated and is important in regulatory decisions. Experiments with four types of invertebrates showed that feeding behavior and dietary uptake control bioaccumulation of cadmium, silver, nickel, and zinc. Metal concentrations in animal tissue correlated with metal concentrations extracted from sediments, but not with metal in porewater, across a range of reactive sulfide concentrations, from 0.5 to 30 micromoles per gram. These results contradict the notion that metal bioavailability in sediments is controlled by geochemical equilibration of metals between porewater and reactive sulfides, a proposed basis for regulatory criteria for metals.

Science↗

Interacting effects of human presence and landscape modification on birds and mammals

Sustainable human–wildlife coexistence requires a mechanistic understanding of the many ways that humans affect animals. However, progress is hampered by the lack of accessible data measuring the dynamic presence of people. Here, we leverage mobile-device data to disentangle how human presence and landscape modification differentially influence the use of geographic and environmental space for 37 mammal and bird species across the United States. Human presence affected more than 65% of species, with substantial variation across species. For ~60% of species that responded to human activities, the effects were interdependent—animals tended to react more strongly to human presence in less modified habitats. Our results demonstrate that human presence and landscape modification have complex combined effects on wildlife, which need to be considered for effective management.

Science↗

Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses

Bats are hosts to a variety of viruses capable of zoonotic transmissions. Because of increased contact between bats, humans, and other animal species, the possibility exists for further cross-species transmissions and ensuing disease outbreaks. We describe here full and partial viral genomes identified using metagenomics in the guano of bats from California and Texas. A total of 34% and 58% of 390,000 sequence reads from bat guano in California and Texas, respectively, were related to eukaryotic viruses , and the largest proportion of those infect insects , reflecting the diet of these insectivorous bats, including members of the viral families Dicistroviridae, Iflaviridae, Tetraviridae, and Nodaviridae and the subfamily Densovirinae. The second largest proportion of virus -related sequences infects plants and fungi, likely reflecting the diet of ingested insects , including members of the viral families Luteoviridae, Secoviridae, Tymoviridae, and Partitiviridae and the genus Sobemovirus. Bat guano viruses related to those infecting mammals comprised the third largest group, including members of the viral families Parvoviridae, Circoviridae, Picornaviridae, Adenoviridae, Poxviridae, Astroviridae, and Coronaviridae. No close relative of known human viral pathogens was identified in these bat populations. Phylogenetic analysis was used to clarify the relationship to known viral taxa of novel sequences detected in bat guano samples, showing that some guano viral sequences fall outside existing taxonomic groups. This initial characterization of the bat guano virome , the first metagenomic analysis of viruses in wild mammals using second-generation sequencing, therefore showed the presence of previously unidentified viral species, genera, and possibly families. Viral metagenomics is a useful tool for genetically characterizing viruses present in animals with the known capability of direct or indirect viral zoonosis to humans.

Journal of Virology↗

Differences in antibody responses against Chelonid Alphaherpesvirus 5 (ChHV5) suggest differences in virus biology in ChHV5-seropositive green turtles from Hawaii and ChHV5-seropositive green turtles from Florida

Fibropapillomatosis (FP) is a tumor disease associated with a herpesvirus (chelonid herpesvirus 5 [ChHV5]) that affects mainly green turtles globally. Understanding the epidemiology of FP has been hampered by a lack of robust serological assays to monitor exposure to ChHV5. This is due in part to an inability to efficiently culture the virus in vitro for neutralization assays. Here, we expressed two glycoproteins (FUS4 and FUS8) from ChHV5 using baculovirus. These proteins were immobilized on enzyme-linked immunosorbent assay plates in their native form and assayed for reactivity to two types of antibodies, full-length 7S IgY and 5.7S IgY, which has a truncated Fc region. Turtles from Florida were uniformly seropositive to ChHV5 regardless of tumor status. In contrast, in turtles from Hawaii, we detected strong antibody reactivity mainly in tumored animals, with a lower antibody response being seen in nontumored animals, including those from areas where FP is enzootic. Turtles from Hawaii actively shedding ChHV5 were more seropositive than nonshedders. In trying to account for differences in the serological responses to ChHV5 between green turtles from Hawaii and green turtles from Florida, we rejected the cross-reactivity of antibodies to other herpesviruses, differences in viral epitopes, or differences in procedure as likely explanations. Rather, behavioral or other differences between green turtles from Hawaii and green turtles from Florida might have led to the emergence of biologically different viral strains. While the strains from turtles in Florida apparently spread independently of tumors, the transmission of the Hawaiian subtype relies heavily on tumor formation.

Florida, Hawaii↗

Cyclic avian mass mortality in the northeastern United States is associated with a novel orthomyxovirus

Since 1998, cyclic mortality events in common eiders ( Somateria mollissima ), numbering in the hundreds to thousands of dead birds, have been documented along the coast of Cape Cod, Massachusetts, USA. Although longitudinal disease investigations have uncovered potential contributing factors responsible for these outbreaks, detecting a primary etiological agent has proven enigmatic. Here we identify a novel orthomyxovirus, tentatively named Wellfleet Bay virus (WFBV), as a potential causative agent of these outbreaks. Genomic analysis of WFBV revealed that it is most closely related to members of the Quaranjavirus genus within the family Orthomyxoviridae . Similar to other members of the genus, WFBV contains an alphabaculovirus gp64-like glycoprotein, which was demonstrated to have fusion activity, and also tentatively suggests that ticks (and/or insects) may vector the virus in nature. However, in addition to the six RNA segments encoding the prototypical structural proteins identified in other quaranjaviruses, a previously unknown RNA segment (segment 7) encoding a novel protein designated as VP7 was discovered in WFBV. Although WFBV shows low to moderate levels of sequence similarity to Quaranfil virus and Johnston Atoll virus , the original members of the Quaranjavirus genus, additional antigenic and genetic analyses demonstrated that it is closely related to the recently identified Cygnet River virus (CyRV) from South Australia, suggesting that WFBV and CyRV may be geographic variants of the same virus. Although the identification of WFBV in part may resolve the enigma of these mass mortality events, the details of the ecology and epidemiology of the virus remain to be determined. Importance The emergence or reemergence of viral pathogens resulting in large-scale outbreaks of disease in humans and/or animals is one of the most important challenges facing biomedicine. For example, understanding how orthomyxoviruses such as novel influenza A virus reassortants and/or mutants emerge to cause epidemic or pandemic disease is at the forefront of current global health concerns. Here we describe the emergence of a novel orthomyxovirus, Wellfleet Bay virus (WFBV), which has been associated with cyclic large-scale bird die-offs in the northeastern United States. This initial characterization study provides a foundation for further research into the evolution, epidemiology, and ecology of newly emerging orthomyxoviruses, such as WFBV, and their potential impacts on animal and/or human health.

Massachusets↗

Enterococci in the environment

Enterococci are common, commensal members of gut communities in mammals and birds, yet they are also opportunistic pathogens that cause millions of human and animal infections annually. Because they are shed in human and animal feces, are readily culturable, and predict human health risks from exposure to polluted recreational waters, they are used as surrogates for waterborne pathogens and as fecal indicator bacteria (FIB) in research and in water quality testing throughout the world. Evidence from several decades of research demonstrates, however, that enterococci may be present in high densities in the absence of obvious fecal sources and that environmental reservoirs of these FIB are important sources and sinks, with the potential to impact water quality. This review focuses on the distribution and microbial ecology of enterococci in environmental (secondary) habitats, including the effect of environmental stressors; an outline of their known and apparent sources, sinks, and fluxes; and an overview of the use of enterococci as FIB. Finally, the significance of emerging methodologies, such as microbial source tracking (MST) and empirical predictive models, as tools in water quality monitoring is addressed. The mounting evidence for widespread extraenteric sources and reservoirs of enterococci demonstrates the versatility of the genus Enterococcus and argues for the necessity of a better understanding of their ecology in natural environments, as well as their roles as opportunistic pathogens and indicators of human pathogens.

Microbiology and Molecular Biology Reviews↗

Geology of Kapingamarangi Atoll, Caroline Islands

Kapingamarangi Atoll of the Caroline Islands consists of a peripheral reef, 1000-4000 feet across, surrounding a nearly circular lagoon which is 5 by 6 nautical miles in area and about 240 feet at maximum depth. Thirty-three islands, most of which are less than half a mile in length, are scattered along the eastern half of the peripheral reef. At least 75 patch reefs, most of which are small, nearly symmetrical mounds, rise to the surface of the lagoon. The peripheral reef and the patch reefs, composed largely of the stony structures of corals and coralline algae, have flat upper surfaces, apparently the result of bevelling by waves during a recent lowering of sea level. The islands on the peripheral reef are formed of partially consolidated stratified sediments composed of clastic limestone particles and the shells of marine animals. These islands are migrating lagoonward across the reef flat because of erosion on the seaward sides and the growth of beaches and bars on the opposite sides. Soils on the islands are poorly developed and retain much of the texture, structure, and composition of the parent rock or sediment. They consist chiefly of mechanical mixtures of carbonaceous material and lime gravel, lime sand, or lime mud. Phosphorite is present on some islands and is still forming locally where apatite derived from bird guano is reacting with limestones. The tidal fluctuation of ground-water lenses, determined on islands of several sizes, ranges from about 4 to 18 inches. In one very small island where the water is brackish, the rise is much greater. The time lag between tidal movements and the rise and fall of fresh water in the islands ranges from a few minutes on very small islands up to 5 hours on some large ones. This time lag is controlled by the permeability of rocks composing an island and varies from one area to another according to the distribution of rock types. The lagoon contains six concentric belts of bottom sediment; in each, the composition and texture depend on the depth of water in which it occurs. Lime sand and lime gravel derived for the most part from the shells of animals form most of the sediment, but a lime mud covers the bottom of the deepest parts of the lagoon. Waves and currents cause gradation between types of sediment to a depth of about 30 feet, but little mixing was detected at greater depths.

Kapingamarangi Atoll, Caroline Islands↗

Green River oil shale—concept of origin extended: An interdisciplinary problem being attacked from both ends

A much fuller understanding of the Green River oil shale and its organic chemistry will emerge when the geologists, paleontologists, organic chemists, biologists, paleolimnologists, and biogeochemists, who are now working on it, integrate their findings with those of the others. We know from the geology, paleontology, and paleolimnology that the biologic progenitors of the organic substance in the Green River oil shale could only have been microscopic algae, and other micro-organisms, that grew and accumulated in the central parts of large, shallow lakes that existed under a subtropical climate. The only nonlacustrine organic components were wind-blown, or water borne, pollens and waxy spores. These, however, made up a large and important part of the organic-rich sediment. The geology of the Green River Formation shows that as the algal and pollen-rich sediment was buried deeper and deeper, progressively more of its pore water and dissolved constituents were expressed. Static pressures may have reached as much as 210 kg cm −2 , and the ambient temperature rose, with depth, to somewhere within the range between 90° and 125° C. Beneath the ancient lakes a tectonically quiescent environment persisted for tens of millions of years after their organic sediments had been deeply buried. The organic material of the Green River oil shale can be divided into three fractions—a small bitumen fraction that is extractable with common organic solvents, a major fraction called koerogen that consists of insoluble pyrobitumens, and a somewhat smaller inert fraction that is neither soluble nor does it yield oil on pyrolysis. As all three fractions originated in the same algal, pollen-rich sediment, an explanation for their marked differences must be sought in their geochemical history or from a study of the modern analogues of their progenitors. The components of the bitumen fraction consisted of “biological markers” that were inherited from the Eocene plants and animals in which they originally formed. Diagenesis has changed these hydrogen-rich compounds, but not enough to obscure their provenance. Kerogen presumably became insoluble because its hydrogen-rich components polymerized. My speculation is that the inert fraction was derived from a polyphenolic substance produced in the original algal ooze by “non-enzymatic browning.” Only three Classes of non-marine algae need be considered as progenitors of the Green River oil shale; the Xanthophyceae, the Chlorophyceae, and the Cyanophyceae. Only the Cyanophyceae (the blue-green algae) meet the biologic and paleontologic requirements to have served as the dominant precursors of the Green River oil shale. Several other oil shales clearly were derived from the Xanthophyceae, specifically Botryococcus. The blue-green algal ooze now forming, and accumulating, in Mud Lake, Florida, has been studied biologically and chemically as a possible present-day analogue of the Green River oil shale precursor. In this small lake we have established the fact that a bacterial inhibitor is produced, which inhibits decay of the algae and thereby permits the accumulation of energy-rich organic compounds. We infer that a similar indigenous inhibitor must have acted in the Eocene lakes to permit them to become the huge energy sinks they were. Studies of the organic chemistry of living blue-green algae show that they contain appreciable percentages of fatty acids, hydrocarbons, and very large percentages of proteins. These promising, energy-rich compounds could serve as source materials for potential conversion into oil shale in the geologic future. Certain marine anaerobic bacteria convert fatty acids into aliphatic hydrocarbons. Fresh-water obligate anaerobes should be investigated to see if they also convert fatty acids into hydrocarbons. The part played by aquatic animals that live in, or on, freshwater algal ooze in synthesizing hydrocarbons has not been investigated, but deserves attention. Pollen grains, of course, must be considered an important precursor of hydrocarbons produced on pyrolysis. They contain far higher percentages of long chain hydrocarbons and alcohols than most plant materials. The major problem ahead is to account for the progressive hydrogenation and subsequent polymerization of the relatively oxygen-rich constituents of algae such as the polysaccharides, amino acids, ammo sugars, and fatty acids into the insoluble pyrobitumens that constitute, particularly, the kerogen fraction of the Green River oil shale.

Wyoming↗

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

Environmental DNA (eDNA) methods for detecting aquatic species are advancing rapidly, but with little evaluation of field protocols or precision of resulting estimates. We compared sampling results from traditional field methods with eDNA methods for two amphibians in 13 streams in central Idaho, USA. We also evaluated three water collection protocols and the influence of sampling location, time of day, and distance from animals on eDNA concentration in the water. We found no difference in detection or amount of eDNA among water collection protocols. eDNA methods had slightly higher detection rates than traditional field methods, particularly when species occurred at low densities. eDNA concentration was positively related to field-measured density, biomass, and proportion of transects occupied. Precision of eDNA-based abundance estimates increased with the amount of eDNA in the water and the number of replicate subsamples collected. eDNA concentration did not vary significantly with sample location in the stream, time of day, or distance downstream from animals. Our results further advance the implementation of eDNA methods for monitoring aquatic vertebrates in stream habitats.

Canadian Journal of Fisheries and Aquatic Sciences↗

Energy sources and ecological role of crayfishes in an Ozark stream: Insights from stable isotopes and gut analysis

Energy sources for the crayfishes Orconectes luteus and O. punctimanus in the Jacks Fork River, Missouri, were quantified using stable isotopes (??13C and ??15N) and gut-content analysis. A dual-isotope mixing model indicated that about two thirds of crayfish production originated from allochthonous carbon sources, and 30-50% of crayfish production was derived from direct consumption of animal matter. Young-of-the-year crayfishes and adult O. luteus were more carnivorous than the larger adult O. punctimanus. Contributions of energy sources determined using the stable isotope mixing model were similar to results of gut-content analysis corrected for differential assimilation of dietary components. Proportions of crayfish production attributed to animal matter by these two methods were four to five times greater than estimates derived from uncorrected gut-content analysis. Unadjusted gut-content analysis overestimated the percentage of crayfish production from feeding directly on detritus. Production-based calculations of crayfish food consumption rates indicated that crayfishes were the dominant consumers of benthic invertebrates, detritus, and algae and may strongly influence lower trophic levels, organic matter processing, and energy flow in this system.

Canadian Journal of Fisheries and Aquatic Sciences↗

Ecological correlates of fecal corticosterone metabolites in female Greater Sage-Grouse (Centrococercus urophasianus)

Measurement of physiological responses can reveal effects of ecological conditions on an animal and correlate with demographic parameters. Ecological conditions for many animal species have deteriorated as a function of invasive plants and habitat fragmentation. Expansion of juniper (Juniperus spp.) trees and invasion of annual grasses into sagebrush (Artemisia spp.) ecosystems have contributed to habitat degradation for Greater Sage-Grouse (Centrococercus urophasianus (Bonaparte, 1827); hereafter, “Sage-Grouse”), a species of conservation concern throughout its range. We evaluated relationships between habitat use in a landscape modified by juniper expansion and annual grasses and corticosterone metabolite levels (stress responses) in feces (FCORTm) of female Sage-Grouse. We used remotely sensed data to estimate vegetation cover within hens’ home ranges and accounted for factors that influence FCORTm in other vertebrates, such as age and weather. We collected 36 fecal samples from 22 radio-collared hens during the brood-rearing season (24 May–26 July) in southwestern Idaho 2017–18. Concentrations of corticosterone increased with home range size but decreased with reproductive effort and temperature. The importance of home range size suggests that maintaining or improving habitats that promote smaller home ranges would likely facilitate a lower stress response by hens, which should benefit Sage-Grouse survival and reproduction.

Idaho↗

Harmless tags or hazardous ads? Investigating the potential for ear tags to increase predation on neonatal ungulates

Studies involving individually marked animals provide insights predicated on the assumption marked individuals are accurate models of their unmarked counterparts. Taxa-specific and marker-specific examinations are needed to determine if marked animals are suitable models for the parameter(s) being measured. Our objective was to determine if brightly colored ear tags influenced the probability of predation for neonatal ungulates. We captured 94 neonatal pronghorn (Antilocapra americana (Ord, 1815)), fitted each neonate with a tracking collar, and attached a yellow ear tag to 49 (52.1%) of the captured neonates. We monitored the survival of each neonate during 2023–2024 in Oklahoma, USA. Predation was the leading cause of mortality during our monitoring period and accounted for 29 (82.9%) of the 35 mortalities with a known cause. Coyotes (Canis latrans Say, 1823) were the predominant predator of neonatal pronghorn in our study area. Presence of a yellow ear tag seemingly did not influence the probability of predation, even though coyotes can distinguish yellow objects from most natural backgrounds. A larger sample size may be needed to validate our results, but neonatal ungulates with an ear tag appear to be accurate models of neonatal ungulates without an ear tag when examining predation risk.

Oklahoma↗

Effect of feeding and of DDT on the activity of hepatic glucose 6- phosphate dehydrogenase in two salmonids

The specific activity of liver glucose 6-phosphate dehydrogenase in yearling rainbow trout remained unchanged when the fish were starved for periods as long as 8 weeks and when starved animals were fed diets of various compositions. Injection of insulin concurrently with refeeding also failed to alter the specific activity of the enzyme in trout. The absence of a dietary or insulin influence on the teleost enzyme system is to be contrasted with studies in mammals in which the activity of hepatic glucose 6-P dehydrogenase was markedly stimulated after refeeding starved animals or injection of insulin.Ingestion of the pesticide DDT by juvenile coho salmon or adult rainbow trout also had no effect on the specific activity of liver glucose 6-P dehydrogenase and DDT failed to inhibit the rainbow trout enzyme in vitro. These results also differ considerably from those found in higher animals.These results suggest that the glucose 6-P dehydrogenase enzyme in teleosts may be under a different type of regulatory control from that found in mammals.

Journal of the Fisheries Research Board of Canada↗

Landscape resistance to frog movements

An animal's capacity to recolonize a patch depends on at least two components: its ability to detect the patch and its ability to reach it. However, the disruption of such processes by anthropic disturbances could explain low animal abundance patterns observed by many investigators in certain landscapes. Through field experiments, we compared the orientation and homing success of northern green frogs (Rana clamitans melanota Rafinesque, 1820) and northern leopard frogs (Rana pipiens Schreber, 1782) translocated across disturbed or undisturbed surfaces. We also monitored the path selected by individuals when presented with a choice between a short distance over a disturbed surface and a longer, undisturbed route. Finally, we measured the water loss and behaviour of frogs on substrates resulting from anthropogenic disturbances and a control. When presented with a choice, 72% of the frogs avoided disturbed surfaces. Although able to orient towards the pond of capture when translocated on disturbed surfaces, frogs had a lower probability of homing successfully to the pond than when translocated at a similar distance on an undisturbed surface. Frogs lost the most water on substrates associated with disturbance and in the absence of cover. Our data illustrate that anthropically disturbed areas devoid of cover, such as mined peatlands and agricultural fields, disrupt the ability of frogs to reach habitat patches and are likely explanations to their reduced abundance patterns in such environments. ?? 2005 NRC Canada.

Canadian Journal of Zoology↗

Causes, consequences, and conservation of ungulate migration

Our understanding of ungulate migration is advancing rapidly due to innovations in modern animal tracking. Herein, we review and synthesize nearly seven decades of work on migration and other long-distance movements of wild ungulates. Although it has long been appreciated that ungulates migrate to enhance access to forage, recent contributions demonstrate that their movements are fine tuned to dynamic landscapes, where forage, snow, and drought change seasonally. Researchers are beginning to understand how ungulates navigate migrations, with the emerging view that animals blend gradient tracking with spatial memory, some of which is socially learned. Although migration often promotes abundant populations—with broad effects on ecosystems—many migrations around the world have been lost or are currently threatened by habitat fragmentation, climate change, and barriers to movement. Fortunately, new efforts that use empirical tracking data to map migrations in detail are facilitating effective conservation measures needed to maintain ungulate migration.

Annual Review of Ecology, Evolution, and Systemati↗

Managing North American waterfowl in the face of uncertainty

Informed management of waterfowl (or any animal population) requires management goals and objectives, the ability to implement management actions, periodic information about population and goal-related varlables, and knowledge of effects of management actions on population and goal-related variables. In North America, international treaties mandate a primary objective of protecting migratory bird populations, with a secondary objective of providing hunting opportunity in a manner compatible with such protection. Through the years, annual establishment of hunting regulations and acquisition and man-agement of habitat have been the primary management actions taken by federal agencies. Various information-gathering programs were established and, by the 1960s, had developed into arguably the best monitoring system in the world for continentally distributed animal populations. Retrospective analyses using estimates from this monitoring system have been used to investigate effects of management actions on waterfowl population and harvest dynamics, but key relationships arc still characterized by uncertainty. We recommend actively adaptive management as an approach that can meet short-term harvest objectives, while reducing uncertainty and ensuring sustainable populations over the long-term.

Annual Review of Ecology and Systematics↗

Interlaboratory comparison of SARS-CoV2 molecular detection assays in use by U.S. veterinary diagnostic laboratories

The continued search for intermediate hosts and potential reservoirs for SARS-CoV2 makes it clear that animal surveillance is critical in outbreak response and prevention. Real-time RT-PCR assays for SARS-CoV2 detection can easily be adapted to different host species. U.S. veterinary diagnostic laboratories have used the CDC assays or other national reference laboratory methods to test animal samples. However, these methods have only been evaluated using internal validation protocols. To help the laboratories evaluate their SARS-CoV2 test methods, an interlaboratory comparison (ILC) was performed in collaboration with multiple organizations. Forty-four sets of 19 blind-coded RNA samples in Tris-EDTA (TE) buffer or PrimeStore transport medium were shipped to 42 laboratories. Results were analyzed according to the principles of the International Organization for Standardization (ISO) 16140-2:2016 standard. Qualitative assessment of PrimeStore samples revealed that, in approximately two-thirds of the laboratories, the limit of detection with a probability of 0.95 (LOD95) for detecting the RNA was ≤20 copies per PCR reaction, close to the theoretical LOD of 3 copies per reaction. This level of sensitivity is not expected in clinical samples because of additional factors, such as sample collection, transport, and extraction of RNA from the clinical matrix. Quantitative assessment of Ct values indicated that reproducibility standard deviations for testing the RNA with assays reported as N1 were slightly lower than those for N2, and they were higher for the RNA in PrimeStore medium than those in TE buffer. Analyst experience and the use of either a singleplex or multiplex PCR also affected the quantitative ILC test results.

Journal of Veterinary Diagnostic Investigation↗