SEARCH · Geology Reports

Results for “Community Science”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,117 records · Page 62Linked to original sources

USGS2005

Stream invertebrate community functional responses to deposited sediment

We investigated functional responses of benthic invertebrates to deposited sediment in four Missouri USA streams. In each stream, invertebrates were sampled along continuums of deposited sediment (particles <2 mm in size) from 0 to 100% surface cover in reaches of fairly homogeneous substrate composition, current velocity, and water depths. Correlations, graphical representations, and the cumulative response curves of feeding and habit groups provided strong empirical support for distinct community functional changes due to deposited sediment. Feeding groups were more sensitive to deposited sediment than habit groups. Densities of all the feeding groups decreased significantly with increasing deposited sediment, while relative densities of gatherers increased significantly. Taxa richness also decreased significantly for all the feeding groups except for the shredders. Increases in deposited sediment were related to significant density decreases for only the clingers and sprawlers in the habit group, resulting in significant increases in the relative densities of both burrowers and climbers. Clingers, sprawlers, and swimmers also showed significant decreases in taxa richness. ?? Eawag, 2005.

Aquatic Sciences↗

USGS2021

Modes of climate variability bridge proximate and evolutionary mechanisms of masting

There is evidence that variable and synchronous reproduction in seed plants (masting) correlates to modes of climate variability, e.g. El Niño Southern Oscillation and North Atlantic Oscillation. In this perspective, we explore the breadth of knowledge on how climate modes control reproduction in major masting species throughout Earth's biomes. We posit that intrinsic properties of climate modes (periodicity, persistence and trends) drive interannual and decadal variability of plant reproduction, as well as the spatial extent of its synchrony, aligning multiple proximate causes of masting through space and time. Moreover, climate modes force lagged but in-phase ecological processes that interact synergistically with multiple stages of plant reproductive cycles. This sets up adaptive benefits by increasing offspring fitness through either economies of scale or environmental prediction. Community-wide links between climate modes and masting across plant taxa suggest an evolutionary role of climate variability. We argue that climate modes may ‘bridge’ proximate and ultimate causes of masting selecting for variable and synchronous reproduction. The future of such interaction is uncertain: processes that improve reproductive fitness may remain coupled with climate modes even under changing climates, but chances are that abrupt global warming will affect Earth's climate modes so rapidly as to alter ecological and evolutionary links.

Philosophical Transactions of the Royal Society B:↗

USGS2019

Spatial and temporal variation in river corridor exchange across a 5th order mountain stream network

Although most field and modeling studies of river corridor exchange have been conducted a scales ranging from 10’s to 100’s of meters; results of these studies are used to predict their ecological and hydrological influences at the scale of river networks. Further complicating prediction, exchanges are expected to vary with hydrologic forcing and the local geomorphic setting. While we desire predictive power, we lack a complete spatiotemporal relationship relating discharge to the variation in geologic setting and hydrologic forcing that are expected across a river basin. Indeed, Wondzell’s (2011) conceptual model predicts systematic variation in river corridor exchange as a function of (1) variation in baseflow over time at a fixed location, (2) variation in discharge with location in the river network, and (3) local geomorphic setting. To test this conceptual model we conducted more than 60 solute tracer studies including a synoptic campaign in the 5th order river network of the H.J. Andrews Experimental Forest (Oregon, USA) and replicate-in-time experiments in four watersheds. We interpret the data using a series of metrics describing river corridor exchange and solute transport, testing for consistent direction and magnitude of relationships relating these metrics to discharge and local geomorphic setting. We confirmed systematic decrease in river corridor exchange space through the river networks, from headwaters to the larger mainstem. However, we did not find systematic variation with changes in discharge through time, nor with local geomorphic setting. While interpretation of our results is complicated by problems with the analytical methods, they are sufficiently robust for us to conclude that space-for-time and time-for-space substitutions are not appropriate in our study system. Finally, we suggest two strategies that will improve the interpretability of tracer test results and help the hyporheic community develop robust data sets that will enable comparisons across multiple sites and/or discharge conditions.

Hydrology and Earth System Sciences↗

USGS1998

Higher temporal variability of forest breeding bird communities in fragmented landscapes

Understanding the relationship between animal community dynamics and landscape structure has become a priority for biodiversity conservation. In particular, predicting the effects of habitat destruction that confine species to networks of small patches is an important prerequisite to conservation plan development. Theoretical models that predict the occurrence of species in fragmented landscapes, and relationships between stability and diversity do exist. However, reliable empirical investigations of the dynamics of biodiversity have been prevented by differences in species detection probabilities among landscapes. Using long-term data sampled at a large spatial scale in conjunction with a capture-recapture approach, we developed estimates of parameters of community changes over a 22-year period for forest breeding birds in selected areas of the eastern United States. We show that forest fragmentation was associated not only with a reduced number of forest bird species, but also with increased temporal variability in the number of species. This higher temporal variability was associated with higher local extinction and turnover rates. These results have major conservation implications. Moreover, the approach used provides a practical tool for the study of the dynamics of biodiversity.

Proceedings of the National Academy of Sciences↗

USGS2009

The Lake Huron pelagic fish community: persistent spatial pattern along biomass and species composition gradients

Spatial patterns in the biomass of pelagic fish in Lake Huron have persisted over 10 years even though biomass decreased 86% and the fish community shifted from dominance by non-native species (rainbow smelt, Osmerus mordax) to dominance by native species (bloater, Coregonus hoyi). Based on multivariate analyses of acoustic biomass data and abiotic variables from the years 1997, 2004, 2005, and 2007, the strength of relationships between abiotic variables (primarily bottom depth) and fish community composition gradients decreased with fish biomass, suggesting that at high biomass, the influence of the measured abiotic variables is minimal. We observed consistently higher biomass in the North Channel and Georgian Bay than in the Main Basin, and as a result, we conclude that these smaller basins are likely important contributors to lakewide fish biomass, production, and dynamics. These results suggest that at current biomass levels, efforts to understand ecology, population dynamics, and lakewide abundance need to incorporate the effects of depth and geographic variation on fish distributions and ecology.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2017

Late Quaternary environmental dynamics in the Atacama Desert reconstructed from rodent midden pollen records

In the past two decades, much has been learned about the late Quaternary climate history of the Atacama Desert with some details still unclear about the seasonality, timing and extent of wet and dry phases. Modern climate studies reveal that, far from exhibiting a unique pattern, seasonal precipitation originates from many sources and mechanisms. For the last 16 ka, we attempt to sort out these complexities in pollen records from four fossil rodent midden series spanning 22°–25°S in northern Chile. Widespread wet conditions prevailed during the late Pleistocene and early Holocene, particularly between 13 and 9 ka, evidenced by <400 m lowering of pollen zones (plant communities) compared to today. Regional differences in the timing and magnitude of this displacement may be related to the prevailing source (tropical/extra‐tropical) or mode (NNW/SE) of tropical precipitation through time. Wet conditions persisted well into the early Holocene, lasting ∼1–1.5 ka longer than previously suggested. The pollen record suggests extreme drying ∼8 ka, possibly associated with a northward shift of the Inter Tropical Convergence Zone, tracking minimum insolation values at subtropical latitudes during the austral summer. The establishment of conditions similar to today happened ∼4 ka.

Journal of Quaternary Science↗

USGS2025

Using a BACI design to assess stream ecology and chemistry response after wildfire

Wildfires can have complex effects on aquatic communities, which can be either beneficial or adverse depending on the setting. In California, USA, the size, frequency, and severity of wildfires has greatly increased over the last few decades. Understanding the effects of fire on aquatic ecosystem health and human land use has become increasingly important in managing the interface of the natural and urban landscape. In this study, we used a before–after control–impact (BACI) study design to test for differences in bed sediment chemistry, water chemistry, benthic algal biomass, and benthic macroinvertebrate communities between burned and unburned (control) watersheds, pre- and post-fire, using data collected before and after California’s 2017 Atlas, Nuns, and Tubbs wildfires. We found a treatment effect (burned vs control) on water chemistry, sediment trace-metal concentrations, algae, and community structure of benthic macroinvertebrates, but we found no evidence of an interaction between time period (pre- vs post-fire) and treatment. Both the difference in environmental factors between our control and burned sample sites and the proximity and degree of wildfire burn severity may have contributed to the results of this BACI study. Our results also highlight the importance of including control sites when assessing the effects of discrete disturbances, such as wildfire, to avoid spurious conclusions of disturbance effects that may be attributable to innate ecological variability.

Freshwater Science↗

USGS2008

Arsenic(III) fuels anoxygenic photosynthesis in hot spring biofilms from Mono Lake, California

Phylogenetic analysis indicates that microbial arsenic metabolism is ancient and probably extends back to the primordial Earth. In microbial biofilms growing on the rock surfaces of anoxic brine pools fed by hot springs containing arsenite and sulfide at high concentrations, we discovered light-dependent oxidation of arsenite [As(III)] to arsenate [As(V)] occurring under anoxic conditions. The communities were composed primarily of Ectothiorhodospira-like purple bacteria or Oscillatoria-like cyanobacteria. A pure culture of a photosynthetic bacterium grew as a photoautotroph when As(III) was used as the sole photosynthetic electron donor. The strain contained genes encoding a putative As(V) reductase but no detectable homologs of the As(III) oxidase genes of aerobic chemolithotrophs, suggesting a reverse functionality for the reductase. Production of As(V) by anoxygenic photosynthesis probably opened niches for primordial Earth's first As(V)-respiring prokaryotes.

Science↗

USGS2025

Module 4: Basic biology of wetland animals

An assortment of animals inhabit wetlands, with many invertebrates, amphibians and reptiles, fishes, birds, and some mammals being wetland specialists. Wetlands provide ample water, food, and cover that benefits resident animals, but periodic high floods, frequent drying, and harsh water qualities (low-oxygen, acidic, saline) can stress wetland animals. Animals that rely on wetlands have developed numerous adaptations to cope with these stresses. The animal biodiversity in wetlands is particularly valued by people, from deep historical and cultural connections, to modern ecotourists and bird watchers who observe it and hunters and anglers who appreciate the consumptive resources they provide. Animals such as alligators and beavers create or physically-modify wetland environments; this activity is called ecosystem engineering and makes these animals among the most important organisms to wetland ecology. Wetlands are high in biodiversity and support rich communities of wetland invertebrates, are primary breeding habitats for most amphibians, and nearly all migratory birds rely on wetlands during some part of their annual cycle. The interactions of animals with plants (herbivory, cutting) and each other (predation) strongly shape wetland environments and affect nutrient cycling. Human impacts on wetlands can negatively affect many animals through habitat loss and degradation, resulting in many wetland amphibians, reptiles, and birds being listed as threatened and endangered species. Thus, wetland conservation is vital to conserve many animal species.

Wetland Science & Practice↗

USGS2024

Stony coral tissue loss disease indirectly alters reef communities

Many Caribbean coral reefs are near collapse due to various threats. An emerging threat, stony coral tissue loss disease (SCTLD), is spreading across the Western Atlantic and Caribbean. Data from the U.S. Virgin Islands reveal how SCTLD spread has reduced the abundance of susceptible coral and crustose coralline algae and increased cyanobacteria, fire coral, and macroalgae. A Caribbean-wide structural equation model demonstrates versatility in reef fish and associations with rugosity independent of live coral. Model projections suggest that some reef fishes will decline due to SCTLD, with the largest changes on reefs that lose the most susceptible corals and rugosity. Mapping these projected declines in space indicates how the indirect effects of SCTLD range from undetectable to devastating.

Virgin Islands↗

USGS2011

Nekton community response to a large-scale Mississippi River discharge: Examining spatial and temporal response to river management

Freshwater flow is generally held to be one of the most influential factors affecting community structure and production in estuaries. In coastal Louisiana, the Caernarvon Freshwater Diversion (CFD) is managed to control freshwater discharge from the Mississippi River into Breton Sound basin. Operational since 1991, CFD has undergone several changes in management strategy including pulsed spring flooding, which was introduced in 2001. We used a 20-yr time series of fisheries-independent data to investigate how variation in freshwater inflow (i.e., pre- and post-CFD, and pre and post spring pulsing management) influences the downstream nekton community (abundance, diversity, and assemblage). Analyses of long-term data demonstrated that while there were effects from the CFD, they largely involved subtle changes in community structure. Spatially, effects were largely limited to the sites immediately downstream of the diversion and extended only occasionally to more down-estuary sites. Temporally, effects were 1) immediate (detected during spring diversion events) or 2) delayed (detected several months post-diversion). Analysis of river management found that pulsed spring-time inflow resulted in more significant changes in nekton assemblages, likely due to higher discharge rates that 1) increased marsh flooding, thus increasing marsh habitat accessibility for small resident marsh species, and 2) reduced salinity, possibly causing displacement of marine pelagic species down estuary.

Breton Sound↗

USGS2017

Biological relevance of streamflow metrics: Regional and national perspectives

Protecting the health of streams and rivers requires identifying ecologically significant attributes of the natural flow regime. Streamflow regimes are routinely quantified using a plethora of hydrologic metrics (HMs), most of which have unknown relevance to biological communities. At regional and national scales, we evaluated which of 509 commonly used HMs were associated with biological indicators of fish and invertebrate community integrity. We quantified alteration of each HM by using statistical models to predict site-specific natural baseline values for each of 728 sites across the USA where streamflow monitoring data were available concurrent with assessments of invertebrate or fish community integrity. We then ranked HMs according to their individual association with biological integrity based on random forest models that included HMs and other relevant covariates, such as land cover and stream chemistry. HMs were generally the most important predictors of biological integrity relative to the covariates. At a national scale, the most influential HMs were measures of depleted high flows, homogenization of flows, and erratic flows. Unique combinations of biologically relevant HMs were apparent among regions. We discuss the implications of our findings to the challenge of selecting HMs for streamflow research and management.

Freshwater Science↗

USGS2012

Ecology and conservation biology of avian malaria

Avian malaria is a worldwide mosquito-borne disease caused by Plasmodium parasites. These parasites occur in many avian species but primarily affect passerine birds that have not evolved with the parasite. Host pathogenicity, fitness, and population impacts are poorly understood. In contrast to continental species, introduced avian malaria poses a substantial threat to naive birds on Hawaii, the Galapagos, and other archipelagoes. In Hawaii, transmission is maintained by susceptible native birds, competence and abundance of mosquitoes, and a disease reservoir of chronically infected native birds. Although vector habitat and avian communities determine the geographic distribution of disease, climate drives transmission patterns ranging from continuous high infection in warm lowland forests, seasonal infection in midelevation forests, and disease-free refugia in cool high-elevation forests. Global warming is expected to increase the occurrence, distribution, and intensity of avian malaria across this elevational gradient and threaten high-elevation refugia, which is the key to survival of many susceptible Hawaiian birds. Increased temperatures may have already increased global avian malaria prevalence and contributed to an emergence of disease in New Zealand.

Hawai'i↗

USGS1984

Biological communities at the Florida Escarpment resemble hydrothermal vent taxa

Dense biological communities of large epifaunal taxa similar to those found along ridge crest vents at the East Pacific Rise were discovered in the abyssal Gulf of Mexico. These assemblages occur on a passive continental margin at the base of the Florida Escarpment, the interface between the relatively impermeable hemipelagic clays of the distal Mississippi Fan and the jointed Cretaceous limestone of the Florida Platform. The fauna apparently is nourished by sulfide rich hypersaline waters seeping out at near ambient temperatures onto the sea floor.

Florida↗

USGS2004

Decomposition and organic matter quality in continental peatlands: The ghost of permafrost past

Permafrost patterning in boreal peatlands contributes to landscape heterogeneity, as peat plateaus, palsas, and localized permafrost mounds are interspersed among unfrozen bogs and fens. The degradation of localized permafrost in peatlands alters local topography, hydrology, thermal regimes, and plant communities, and creates unique peatland features called "internal lawns." I used laboratory incubations to quantify carbon dioxide (CO 2) production in peat formed under different permafrost regimes (with permafrost, without permafrost, melted permafrost), and explored the relationships among proximate organic matter fractions, nutrient concentrations, and decomposition. Peat within each feature (internal lawn, bog, permafrost mound) is more chemically similar than peat collected within the same province (Alberta, Saskatchewan) or within depth intervals (surface, deep). Internal lawn peat produces more CO2 than the other peatland types. Across peatland features, acid-insoluble material (AIM) and AIM/nitrogen are significant predictors of decomposition. However, within each peatland feature, soluble proximate fractions are better predictors of CO2 production. Permafrost stability in peatlands influences plant and soil environments, which control litter inputs, organic matter quality, and decomposition rates. Spatial patterns of permafrost, as well as ecosystem processes within various permafrost features, should be considered when assessing the fate of soil carbon in northern ecosystems. ?? 2004 Springer Science+Business Media, Inc.

Ecosystems↗

USGS2018

The National Elevation Dataset

The National Elevation Dataset (NED) is a primary elevation data product that has been produced and distributed by the U.S. Geological Survey (USGS). Since its inception, the USGS has compiled and published topographic information in many forms, and the NED is a significant development in this long line of products that describe the land surface. The NED provides seamless raster elevation data of the conterminous United States (CONUS), Alaska, Hawaii, U.S. island territories, Mexico, and Canada. The NED is derived from diverse source datasets that are processed to a specification with consistent resolutions, coordinate system, elevation units, and horizontal and vertical datums. The NED was developed as the logical result of the maturation of the long-standing USGS elevation program, which for many years concentrated on production of quadrangle-based digital elevation models (DEM). The NED contributes to the elevation layer of The National Map, and it provides basic elevation information for earth science studies and mapping applications in the U.S. and most of North America. For over 15 years (1999–2014), the NED served as the flagship elevation product of the USGS. In 2015, the 3D Elevation Program (3DEP) was initiated. When the 3DEP initiative became operational, the name “National Elevation Dataset” (and the abbreviation “NED”) were retired as the USGS elevation activities and data were rebranded under the 3DEP banner. However, elevation data produced and distributed as part of the NED are still widely used (and distributed by other entities), so there is a continuing need for detailed documentation, including how it was produced, its accuracy, and how it is used. This chapter directly addresses that need for detailed information about the NED. The most recent detailed description of the NED appeared in the 2nd edition of the DEM Users Manual (2007), and because NED production continued through 2014, the details reported herein provide valuable information for data accessed by the user community from 2007 through 2014. The NED has been widely used in operational applications and research studies and is extensively cited in reports on those activities, so it is important for the user community to have access to information about the NED to better judge how its qualities and characteristics might affect results derived from its use as the elevation data source. Additionally, the NED seamless layers serve as one of the input data sources for the current 3DEP elevation production system, so, as with any input data source, an understanding of the data characteristics is critical.

Book chapter↗

USGS2012

A national geographic framework for guiding conservation on a landscape scale

The U.S. Fish and Wildlife Service, along with the global conservation community, has recognized that the conservation challenges of the 21st century far exceed the responsibilities and footprint of any individual agency or program. The ecological effects of climate change and other anthropogenic stressors do not recognize geopolitical boundaries and, as such, demand a national geographic framework to provide structure for cross-jurisdictional and landscape-scale conservation strategies. In 2009, a new map of ecologically based conservation regions in which to organize capacity and implement strategic habitat conservation was developed using rapid prototyping and expert elicitation by an interagency team of U.S. Fish and Wildlife Service and U.S. Geological Survey scientists and conservation professionals. Incorporating Bird Conservation Regions, Freshwater Ecoregions, and U.S. Geological Survey hydrologic unit codes, the new geographic framework provides a spatial template for building conservation capacity and focusing biological planning and conservation design efforts. The Department of Interior's Landscape Conservation Cooperatives are being organized in these new conservation regions as multi-stakeholder collaborations for improved conservation science and management.

Journal of Fish and Wildlife Management↗

USGS2016

Groundwater

Introduction Groundwater represents the terrestrial subsurface component of the hydrologic cycle. As such, groundwater is generally in motion, moving from elevated areas of recharge to lower areas of discharge. Groundwater usually moves in accordance with Darcy’s law (Dalmont, Paris: Les Fontaines Publiques de la Ville de Dijon, 1856). Groundwater residence times can be under a day in small upland catchments to over a million years in subcontinental-sized desert basins. The broadest definition of groundwater includes water in the unsaturated zone, considered briefly here. Water chemically bound to minerals, as in gypsum (CaSO 4 • 2H 2 O) or hydrated clays, cannot flow in response to gradients in total hydraulic head (pressure head plus elevation head); such water is thus usually excluded from consideration as groundwater. In 1940, M. King Hubbert showed Darcy’s law to be a special case of thermodynamically based potential field equations governing fluid motion, thereby establishing groundwater hydraulics as a rigorous engineering science ( Journal of Geology 48, pp. 785–944). The development of computer-enabled numerical methods for solving the field equations with real-world approximating geometries and boundary conditions in the mid-1960s ushered in the era of digital groundwater modeling. An estimated 30 percent of global fresh water is groundwater, compared to 0.3 percent that is surface water, 0.04 percent atmospheric water, and 70 percent that exists as ice, including permafrost ( Shiklomanov and Rodda 2004 , cited under Groundwater Occurrence ). Groundwater thus constitutes the vast majority—over 98 percent—of the unfrozen fresh-water resources of the planet, excluding surface-water reservoirs. Environmental dimensions of groundwater are equally large, receiving attention on multiple disciplinary fronts. Riparian, streambed, and spring-pool habitats can be sensitively dependent on the amount and quality of groundwater inputs that modulate temperature and solutes, including nutrients and dissolved oxygen. Groundwater withdrawals can negatively impact riparian habitats by depriving ecosystems of adequate fresh water and fragmenting communities when streams go dry. Biochemical reactions in shallow groundwater can remove anthropogenically elevated nitrogen compounds and reduce—but only to a point—the greening of waterways and shorelines with periphyton and harmful algal blooms. Groundwater extraction for beneficial use is increasingly limited by water-quality constraints imposed by naturally occurring and introduced substances. Overdrafting can cause land-surface subsidence, damaging buildings and roads and disrupting canals, sewers, and other gravity-flow conveyances. Increases in groundwater levels can cause soil salinization in dry regions and erosive sapping and flooding in wet regions. Coastal saltwater intrusion, groundwater flooding, salinization associated with groundwater-irrigated agriculture, induced seismicity from injected wastes, and the detrimental impacts of groundwater depletion are among the major environmental challenges of our time.

Book chapter↗