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USGS2007

A virus in a fungus in a plant: Three-way symbiosis required for thermal tolerance

A mutualistic association between a fungal endophyte and a tropical panic grass allows both organisms to grow at high soil temperatures. We characterized a virus from this fungus that is involved in the mutualistic interaction. Fungal isolates cured of the virus are unable to confer heat tolerance, but heat tolerance is restored after the virus is reintroduced. The virus-infected fungus confers heat tolerance not only to its native monocot host but also to a eudicot host, which suggests that the underlying mechanism involves pathways conserved between these two groups of plants.

Science↗

USGS2013

Disturbance metrics predict a wetland Vegetation Index of Biotic Integrity

Indices of biological integrity of wetlands based on vascular plants (VIBIs) have been developed in many areas in the USA. Knowledge of the best predictors of VIBIs would enable management agencies to make better decisions regarding mitigation site selection and performance monitoring criteria. We use a novel statistical technique to develop predictive models for an established index of wetland vegetation integrity (Ohio VIBI), using as independent variables 20 indices and metrics of habitat quality, wetland disturbance, and buffer area land use from 149 wetlands in Ohio, USA. For emergent and forest wetlands, predictive models explained 61% and 54% of the variability, respectively, in Ohio VIBI scores. In both cases the most important predictor of Ohio VIBI score was a metric that assessed habitat alteration and development in the wetland. Of secondary importance as a predictor was a metric that assessed microtopography, interspersion, and quality of vegetation communities in the wetland. Metrics and indices assessing disturbance and land use of the buffer area were generally poor predictors of Ohio VIBI scores. Our results suggest that vegetation integrity of emergent and forest wetlands could be most directly enhanced by minimizing substrate and habitat disturbance within the wetland. Such efforts could include reducing or eliminating any practices that disturb the soil profile, such as nutrient enrichment from adjacent farm land, mowing, grazing, or cutting or removing woody plants.

Ecological Indicators↗

USGS2013

Litter quality versus soil microbial community controls over decomposition: a quantitative analysis

The possible effects of soil microbial community structure on organic matter decomposition rates have been widely acknowledged, but are poorly understood. Understanding these relationships is complicated by the fact that microbial community structure and function are likely to both affect and be affected by organic matter quality and chemistry, thus it is difficult to draw mechanistic conclusions from field studies. We conducted a reciprocal soil inoculum × litter transplant laboratory incubation experiment using samples collected from a set of sites that have similar climate and plant species composition but vary significantly in bacterial community structure and litter quality. The results showed that litter quality explained the majority of variation in decomposition rates under controlled laboratory conditions: over the course of the 162-day incubation, litter quality explained nearly two-thirds (64 %) of variation in decomposition rates, and a smaller proportion (25 %) was explained by variation in the inoculum type. In addition, the relative importance of inoculum type on soil respiration increased over the course of the experiment, and was significantly higher in microcosms with lower litter quality relative to those with higher quality litter. We also used molecular phylogenetics to examine the relationships between bacterial community composition and soil respiration in samples through time. Pyrosequencing revealed that bacterial community composition explained 32 % of the variation in respiration rates. However, equal portions (i.e., 16 %) of the variation in bacterial community composition were explained by inoculum type and litter quality, reflecting the importance of both the meta-community and the environment in bacterial assembly. Taken together, these results indicate that the effects of changing microbial community composition on decomposition are likely to be smaller than the potential effects of climate change and/or litter quality changes in response to increasing atmospheric CO 2 concentrations or atmospheric nutrient deposition.

Oecologia↗

USGS2019

Climate-driven shifts in soil temperature and moisture regimes suggest opportunities to enhance assessments of dryland resilience and resistance

Assessing landscape patterns in climate vulnerability, as well as resilience and resistance to drought, disturbance, and invasive species, requires appropriate metrics of relevant environmental conditions. In dryland systems of western North America, soil temperature and moisture regimes have been widely utilized as an indicator of resilience to disturbance and resistance to invasive plant species by providing integrative indicators of long-term site aridity, which relates to ecosystem recovery potential and climatic suitability to invaders. However, the impact of climate change on these regimes, and the suitability of the indicator for estimating resistance and resilience in the context of climate change have not been assessed. Here we utilized a daily time-step, process-based, ecosystem water balance model to characterize current and future patterns in soil temperature and moisture conditions in dryland areas of western North America, and evaluate the impact of these changes on estimation of resilience and resistance. Soil temperature increases in the twenty-first century are substantial, relatively uniform geographically, and robust across climate models. Higher temperatures will expand the areas of mesic and thermic soil temperature regimes while decreasing the area of cryic and frigid temperature conditions. Projections for future precipitation are more variable both geographically and among climate models. Nevertheless, future soil moisture conditions are relatively consistent across climate models for much of the region. Projections of drier soils are expected in most of Arizona and New Mexico, as well as the central and southern U.S. Great Plains. By contrast, areas with projections of increasing soil moisture include northeastern Montana, southern Alberta and Saskatchewan, and many areas dominated by big sagebrush, particularly the Central and Northern Basin and Range and the Wyoming Basin ecoregions. In addition, many areas dominated by big sagebrush are expected to experience pronounced shifts toward cool season moisture, which will create more area with xeric moisture conditions and less area with ustic conditions. In addition to indicating widespread geographic shifts in the distribution of soil temperature and moisture regimes, our results suggest opportunities for enhancing the integration of these conditions into a quantitative framework for assessing climate change impacts on dryland ecosystem resilience and resistance that is responsive to long-term projections.

Alberta, Arizona, British Columbia, California, Co↗

USGS2001

Green fluorescent protein is lighting up fungal biology

Prasher ( 42 ) cloned a cDNA for the green fluorescent protein (GFP) gene from the jellyfish Aequorea victoria in 1992. Shortly thereafter, to the amazement of many investigators, this gene or derivatives thereof were successfully expressed and conferred fluorescence to bacteria and Caenorhabditis elegans cells in culture ( 10 , 31 ), followed by yeast ( 24 , 39 ), mammals ( 40 ), Drosophila ( 66 ), Dictyostelium ( 23 , 30 ), plants ( 28 , 49 ), and filamentous fungi ( 54 ). The tremendous success of GFP as a reporter can be attributed to unique qualities of this 238-amino-acid, 27-kDa protein which absorbs light at maxima of 395 and 475 nm and emits light at a maximum of 508 nm. The fluorescence of GFP requires only UV or blue light and oxygen, and therefore, unlike the case with other reporters (β-glucuronidase, β-galacturonidase, chloramphenicol acetyltransferase, and firefly luciferase) that rely on cofactors or substrates for activity, in vivo observation of gfp expression is possible with individual cells, with cell populations, or in whole organisms interacting with symbionts or environments in real time. Complications caused by destructive sampling, cell permeablization for substrates, or leakage of products do not occur. Furthermore, the GFP protein is extremely stable in vivo and has been fused to the C or N terminus of many cellular and extracellular proteins without a loss of activity, thereby permitting the tagging of proteins for gene regulation analysis, protein localization, or specific organelle labeling. The mature protein resists many proteases and is stable up to 65°C and at pH 5 to 11, in 1% sodium dodecyl sulfate or 6 M guanidinium chloride (reviewed in references 17 and 67 ), and in tissue fixed with formaldehyde, methanol, or glutaraldehyde. However, GFP loses fluorescence in methanol-acetic acid (3:1) and can be masked by autofluorescent aldehyde groups in tissue fixed with glutaraldehyde. Fluorescence is optimal at pH 7.2 to 8.0 ( 67 ). Limitations on GFP as a reporter for some applications are its low turnover rate, 2-h lag time for autoactivation of its chromophore, improper folding at high temperatures (37°C), which results in nonfluorescent and insoluble forms of the protein, and requirement for oxygen, which is not present in equal concentrations in all subcellular locations or cell types (reviewed in references 17 and 67 ). These characteristics of GFP, however, have not posed a problem for many applications, and mutant forms of GFP that have an ability to fold properly at high temperatures, increased solubility and fluorescence, reduced photobleaching ( 16 , 17 , 51 ), and reduced half-lives ( 1 ) have been developed. Coupled with fluorescence-activated cell sorting, confocal microscopy or quantitative image analysis techniques, GFP technology can be used to isolate transformed cells or specific cell types from populations of cells ( 14 ), to quantify gene expression of individual cells within whole organisms ( 8 ), or to assess the dispersal and biomass of organisms in complex environments, such as in animal or plant hosts ( 38 , 59 ), in biofilms ( 55 ), in fermentors ( 41 ), on leaf surfaces ( 53 , 61 ), or in soils ( 2 ). The vast majority of studies utilizing GFP expression in fungi have been with yeast (reviewed in reference 13 ). Ustilago maydis was the first filamentous fungus for which successful expression of gfp was reported ( 54 ), followed closely by Aspergillus nidulans ( 22 , 57 ) and Aureobasidium pullulans ( 61 ). Presently, gfp expression has been reported for 16 species comprising 12 genera of filamentous fungi, including Colletotrichum ( 21 , 44 ), Mycosphaerella ( 52 ), Magnaporthe ( 32 , 35 ), Cochliobolus ( 38 ), Trichoderma ( 2 , 70 ), Podospora ( 5 ), Sclerotinia ( 63 ), Schizophyllum ( 37 ), Aspergillus ( 20 , 47 , 50 ) and Phytophthora ( 7 , 62 ). In this review we draw on published reports, with the goal of providing an overview of GFP technology as it applies to the biology of filamentous fungi. These reports are not exhaustive of potential applications of GFP technology, as examples of genomic approaches to utilizing GFP in bacterial and yeast systems attest ( 4 , 46 , 60 , 65 ). Expression of gfp in filamentous fungi requires a gfp variant that is efficiently translated in fungi, a transformation system, and a fungal promoter that satisfies the requirements of a given experimental objective. Transformation of fungi has recently been reviewed by Gold et al. ( 26 ). Robinson and Sharon ( 44 ) suggest that GFP can actually be used to optimize transformation protocols. In addition to reporting the construction of a new fungal transformation vector that expresses SGFP under the control of the ToxA gene promoter from Pyrenophora tritici-repentis ( 12 ) and demonstrating its use in plant pathogens belonging to eight different genera of filamentous fungi ( Fusarium, Botrytis, Pyrenophora, Alternaria, Cochliobolus, Sclerotinia, Colletotrichum , and Verticillium ), in this review we also enumerate and describe a comprehensive list of vectors for expressing GFP in fungi.

Applied and Environmental Microbiology↗

USGS1990

Soil-vegetation correlations in the Connecticut River floodplain of Western Massachusetts

As part of a national study analyzing the relation between hydric soils and wetland vegetation, the vegetation associated with a series of known soils was sampled along the Connecticut River floodplain in Massachusetts. Weighted average and index average (presence/absence) values were calculated for vegetation using wetland ecological index values from the National List of Plant Species that Occur in Wetlands developed by the U.S. Fish and Wildlife Service and procedures developed by T. R. Wentworth and G. P. Johnson at North Carolina State University. Good correspondence between soils and vegetation was recorded with two exceptions. Two typically nonhydric soils were determined to be hydric based on vegetation analyses. Examination of the groundwater hydrology of these two soils confirmed their hydric nature. The authors suggested that one of these soils may need to be redefined and they also suggested that the assigned index values for a few species of vegetation should be reexamined. However, in general the index average values of vegetation based on published wetland index values corresponded with the hydric and nonhydric nature of soils.

Massachusetts↗

USGS2023

Modeled production, oxidation, and transport processes of wetland methane emissions in temperate, boreal, and Arctic regions

Wetlands are the largest natural source of methane (CH 4 ) to the atmosphere. The eddy covariance method provides robust measurements of net ecosystem exchange of CH 4 , but interpreting its spatiotemporal variations is challenging due to the co-occurrence of CH 4 production, oxidation, and transport dynamics. Here, we estimate these three processes using a data-model fusion approach across 25 wetlands in temperate, boreal, and Arctic regions. Our data-constrained model—iPEACE—reasonably reproduced CH 4 emissions at 19 of the 25 sites with normalized root mean square error of 0.59, correlation coefficient of 0.82, and normalized standard deviation of 0.87. Among the three processes, CH 4 production appeared to be the most important process, followed by oxidation in explaining inter-site variations in CH 4 emissions. Based on a sensitivity analysis, CH 4 emissions were generally more sensitive to decreased water table than to increased gross primary productivity or soil temperature. For periods with leaf area index (LAI) of ≥20% of its annual peak, plant-mediated transport appeared to be the major pathway for CH 4 transport. Contributions from ebullition and diffusion were relatively high during low LAI (<20%) periods. The lag time between CH 4 production and CH 4 emissions tended to be short in fen sites (3 ± 2 days) and long in bog sites (13 ± 10 days). Based on a principal component analysis, we found that parameters for CH 4 production, plant-mediated transport, and diffusion through water explained 77% of the variance in the parameters across the 19 sites, highlighting the importance of these parameters for predicting wetland CH 4 emissions across biomes. These processes and associated parameters for CH 4 emissions among and within the wetlands provide useful insights for interpreting observed net CH 4 fluxes, estimating sensitivities to biophysical variables, and modeling global CH 4 fluxes.

Global Change Biology↗

USGS2010

Environmental tolerance of an invasive riparian tree and its potential for continued spread in the southwestern US

Questions: Exotic plant invasion may be aided by facilitation and broad tolerance of environmental conditions, yet these processes are poorly understood in species-rich ecosystems such as riparian zones. In the southwestern United States (US) two plant species have invaded riparian zones: tamarisk (Tamarix ramosissima, T. chinensis, and their hybrids) and Russian olive (Elaeagnus angustifolia). We addressed the following questions: (1) is Russian olive able to tolerate drier and shadier conditions than cottonwood and tamarisk? (2) Can tamarisk and cottonwood facilitate Russian olive invasion? Location: Arid riparian zones, southwestern US. Methods: We analyzed riparian tree seedling requirements in a controlled experiment, performed empirical field studies, and analyzed stable oxygen isotopes to determine the water sources used by Russian olive. Results: Russian olive survival was significantly higher in dense shade and low moisture conditions than tamarisk and cottonwood. Field observations indicated Russian olive established where flooding cannot occur, and under dense canopies of tamarisk, cottonwood, and Russian olive. Tamarisk and native riparian plant species seedlings cannot establish in these dry, shaded habitats. Russian olive can rely on upper soil water until 15 years of age, before utilizing groundwater. Conclusions: We demonstrate that even though there is little evidence of facilitation by cottonwood and tamarisk, Russian olive is able to tolerate dense shade and low moisture conditions better than tamarisk and cottonwood. There is great potential for continued spread of Russian olive throughout the southwestern US because large areas of suitable habitat exist that are not yet inhabited by this species. ?? 2010 International Association for Vegetation Science.

Journal of Vegetation Science↗

USGS2002

Born of fire - restoring sagebrush steppe

Fire is a natural feature of sagebrush grasslands in the Great Basin. The invasion of exotic annual grasses, such as Bromus tectorum (cheatgrass), has changed the environment in these ecosystems. Invasive annual grasses provide a dense and continuous source of fuel that extends the season for fires and increases the frequency of fires in the region. Frequent fires eventually eliminate the native sagebrush. These annual grasses also change soil nutrients, especially carbon and nitrogen, such that invasive annual grasses are favored over the native plants. The Forest and Rangeland Ecosystem Science Center of the U.S. Geological Survey (USGS) is studying how to reduce the problems caused by these invasive annual grasses and restore native sagebrush grasslands. The areas of research include understanding disturbance regimes, especially fire, discerning the role of nutrients in restoring native plants, determining the potential to restore forbs important for wildlife, and ascertaining the past and present use of native and nonnative plants in revegetation projects.

Fact Sheet↗

USGS2018

Science support for evaluating natural recovery of polychlorinated biphenyl concentrations in fish from Crab Orchard Lake, Crab Orchard National Wildlife Refuge, Illinois

Introduction Crab Orchard Lake in southern Illinois is one of the largest and most popular recreational lakes in the state. Construction of the nearly 7,000-acre reservoir in the late 1930s created employment opportunities through the Works Progress Administration, and the lake itself was intended to supply water, control flooding, and provide recreational opportunities for local communities (Stall, 1954). In 1942, the Department of War appropriated or purchased more than 20,000 acres of land around Crab Orchard Lake and constructed the Illinois Ordnance Plant, which manufactured bombs and anti-tank mines during World War II. After the war, an Act of Congress transferred the property to the U.S. Department of the Interior. Crab Orchard National Wildlife Refuge was established on August 5, 1947, for the joint purposes of wildlife conservation, agriculture, recreation, and industry. Production of explosives continued, but new industries also moved onsite. More than 200 tenants have held leases with Crab Orchard National Wildlife Refuge and have operated a variety of manufacturing plants (electrical components, plated metal parts, ink, machined parts, painted products, and boats) on-site. Soils, water, and sediments in several areas of the refuge were contaminated with hazardous substances from handling and disposal methods that are no longer acceptable environmental practice (for example, direct discharge to surface water, use of unlined landfills). Polychlorinated biphenyl (PCB) contamination at the refuge was identified in the 1970s, and a PCB-based fish-consumption advisory has been in effect since 1988 for Crab Orchard Lake. The present advisory covers common carp ( Cyprinus carpio ) and channel catfish ( Ictalurus punctatus ); see Illinois Department of Public Health (2017). Some of the most contaminated areas of the refuge were actively remediated, and natural ecosystem recovery processes are expected to further reduce residual PCB concentrations in the lake. The U.S. Fish and Wildlife Service sought technical support to understand environmental drivers of current (2017) PCB residues in fish tissue and patterns in PCB residues through time to inform the fish-consumption advisory for Crab Orchard Lake. This project is planned in two phases (Tasks 1 and 2); the first phase is included in this report. Task 1, reported here, includes a review of existing literature and a brief overview focused on environmental and biochemical/physiological processes that drive PCB residues in fish tissue. This review specifically targets processes that are relevant for freshwater lacustrine environments such as those at Crab Orchard Lake. In addition to discussions of environmental fate, metabolism, and accumulation of PCBs, this review includes a brief scientifically based explanation of approaches used to establish fish-consumption advisories. A planned second task (Task 2) will include a compilation and summary of existing data on PCB residues in fish tissue samples from Crab Orchard Lake. This summary will also place Crab Orchard Lake data in a broader geographic context through a comparison with fish data from other Midwestern lakes. When Task 1 and Task 2 are complete, resource managers will have (a) a synthesis of existing literature that characterizes the processes influencing the fate of residual PCBs remaining in systems such as Crab Orchard Lake, (b) a summary of natural PCB attenuation processes for use in risk communication with the public, and (c) a summary of existing data on PCBs in fish tissues from Crab Orchard Lake, including exploratory plots of tissue residues through time. Overall, this project will provide data to help resource managers better understand the ecological and public health consequences of residual PCBs in Crab Orchard Lake.

Illinois↗

USGS1970

Soil-food chain-pesticide wildlife relationships in aldrin-treated fields

Soil-food-chain-pesticide wildlife relationships were investigated to learn the concentration of pesticide residues present in soils, macro-invertebrates, vertebrates, and seeds as a result of annual applications of aldrin at recommended rates for pest control. Two central Missouri cornfields treated with aldrin at 1 lb/acre, for 16 and 15 of the past 17 years, were selected for study during 1965-67. Primary samples collected for residue analyses included soils, earthworms (Lumbricidae), crickets (Gryllidae), and two kinds of ground beetles (Carabidae) obtained during early April, June, August, and October. Vertebrates and plant seeds collected during 1967 included white-footed mice ( Peromyscus maniculatus ), toads ( Bufo americanus ), snakes ( Thamnophis sirtalis and Pituophis sayi ), corn ( Zea Mays ), foxtail ( Setaria Faberii ), and annual sunflower ( Helianthus annuus ). Pesticide residues consisted primarily of dieldrin, the degradation product of aldrin. Combined aldrin and dieldrin residues, as two field all-season averages, wet weight basis, were: soils, 0.31 ppm; earthworms, 1.49 ppm; crickets, 0.23 ppm; Harpalus ground beetles, 1.10 ppm; Poecilus ground beetles, 9.67 ppm; white-footed mice, 0.98 ppm; toads, 3.53 ppm; garter snakes, 12.35 ppm; and corn, foxtail, and sunflower seeds less than 0.02 ppm each. Unusually high average residues (37.48 ppm) in Poecilus beetles during June, 1967, were attributed to abnormally high soil moisture and predacious feeding habits of these insects.

Missouri↗

USGS2000

Tracking the spring migration of a bar-headed goose ( Anser indicus ) across the Himalaya with satellite telemetry

Soil-food-chain-pesticide wildlife relationships were investigated to learn the concentration of pesticide residues present in soils, macro-invertebrates, vertebrates, and seeds as a result of annual applications of aldrin at recommended rates for pest control. Two central Missouri cornfields treated witb aldrin at 1 lb/acre, for 16 and 15 of the past 17 years, were selected for study during 1965-67. Primary samples collected for residue analyses included soils, earthworms (Lumbricidae), crickets (GryIlidae), and two kinds of ground beetles (Carabidae) obtained during early April, June, August, and October. Vertebrates and plant seeds collected during 1967 included white-footed mice (Peromyscus maniculatus), toads (Bufo americanus), snakes (Thamnophis sirtalis and Pituophis sayi), corn (Zea Mays), foxtail (Setaria Faberii), and annual sunflower (Helianthus annuus). Pesticide residues consisted primarily of dieldrin, the degradation product of aldrin. Combined aldrin and dieldrin residues, as two field all-season averages, wet weight basis, were: soils, 0.31 ppm; earthworms, 1.49 ppm; crickets, 0.23 ppm; Harpalus ground beetles, 1.10 ppm; Poecilus ground beetles, 9.67 ppm; white-footed mice, 0.98 ppm; toads, 3.53 ppm; garter snakes, 12.35 ppm; and corn, foxtail, and sunflower seeds less than 0.02 ppm each. Unusually high average residues (37.48 ppm) in Poecilus beetles during June, 1967, were attributed to abnormally high soil moisture and predacious feeding habits of these insects.

Global Environmental Research↗

USGS2020

Barnyardgrass (Echinochloa crusgalli) emergence and growth in a changing climate in great plains wetlands

Projected twenty first century increases in temperature and precipitation intensity in the U.S. Great Plains may alter playa wetland hydroperiods. Our objective was to identify favorable germination conditions for a common moist-soil grass, Barnyardgrass ( Echinochloa crusgalli L.), by evaluating emergence and growth response to various environmental conditions specific to the Northern (Nebraska) and Southern (Texas) range of playas. We used a temperature-controlled growth chamber experiment to evaluate emergence and growth response of Barnyardgrass to three main effects: (i) weekly temperatures representing historical and future conditions under a moderate emissions scenario, (ii) dry, moist, and saturated soil moisture conditions, and (iii) various seed bank densities. In Nebraska samples, projected future temperatures reduced emergence percentage by up to 20%, but increased emergence percentage by up to 15% for Texas samples. For Nebraska samples, plants were 9.6 cm taller under field capacity moisture compared to saturated moisture. Texas plant height was driven by temperature, where historical conditions produced plants that were 13 cm shorter than future warm conditions. These effects may be exacerbated in natural settings over time and when inter-specific competition exists; thus, temperature, soil moisture, and seed bank densities may be important considerations when planning for playa management in future climate conditions.

Nebraska, Texas↗

USGS2023

A prioritization protocol for coastal wetland restoration on Molokaʻi, Hawaiʻi

Hawaiian coastal wetlands provide important habitat for federally endangered waterbirds and socio-cultural resources for Native Hawaiians. Currently, Hawaiian coastal wetlands are degraded by development, sedimentation, and invasive species and, thus, require restoration. Little is known about their original structure and function due to the large-scale alteration of the lowland landscape since European contact. Here, we used 1) rapid field assessments of hydrology, vegetation, soils, and birds, 2) a comprehensive analysis of endangered bird habitat value, 3) site spatial characteristics, 4) sea-level rise projections for 2050 and 2100 and wetland migration potential, and 5) preferences of the Native Hawaiian community in a GIS site suitability analysis to prioritize restoration of coastal wetlands on the island of Molokaʻi. The site suitability analysis is the first, to our knowledge, to incorporate community preferences, habitat criteria for endangered waterbirds, and sea-level rise into prioritizing wetland sites for restoration. The rapid assessments showed that groundwater is a ubiquitous water source for coastal wetlands. A groundwater-fed, freshwater herbaceous peatland or “coastal fen” not previously described in Hawaiʻi was found adjacent to the coastline at a site being used to grow taro, a staple crop for Native Hawaiians. In traditional ecological knowledge, such a groundwater-fed, agro-ecological system is referred to as a loʻipūnāwai (spring pond). Overall, 39 plant species were found at the 12 sites; 26 of these were wetland species and 11 were native. Soil texture in the wetlands ranged from loamy sands to silt and silty clays and the mean % organic carbon content was 10.93% ± 12.24 (sd). In total, 79 federally endangered waterbirds, 13 Hawaiian coots (‘alae keʻokeʻo; Fulica alai ) and 66 Hawaiian stilts (aeʻo; Himantopus mexicanus knudseni ), were counted during the rapid field assessments. The site suitability analysis consistently ranked three sites the highest, Kaupapaloʻi o Kaʻamola, Kakahaiʻa National Wildlife Refuge, and ʻŌhiʻapilo Pond, under three different weighting approaches. Site prioritization represents both an actionable plan for coastal wetland restoration and an alternative protocol for restoration decision-making in places such as Hawaiʻi where no pristine “reference” sites exist for comparison.

Hawaii↗

USGS2010

Yield responses of ruderal plants to sucrose in invasive-dominated sagebrush steppe of the northern Great Basin

Restoration of sagebrush-steppe plant communities dominated by the invasive ruderals Bromus tectorum (cheatgrass) and Taeniatherum caput-medusae (medusahead) can be facilitated by adding carbon (C) to the soil, stimulating microbes to immobilize nitrogen (N) and limit inorganic N availability. Our objectives were to determine responses in (1) cheatgrass and medusahead biomass and seed production; (2) soil microbial biomass C and N; and (3) inorganic soil N to a range of C doses and to calculate the lowest dose that yielded a significant response. In November 2005, we applid 12 C doses ranging from 0 to 2,400 kg C/ha as sucrose to plots sown with cheatgrass and medusahead at two sites in the northern Great Basin. Other ruderal plants established in our plots, and this entire ruderal community was negatively affected by C addition. End-of-year biomass of the ruderal community decreased approximately by approximately 6% at each site for an increase in C dose of 100 kg C/ha. For the same increase in C, microbial biomass C increased by 2–4 mg/kg in November 2005 and March 2006, but not in July 2006. There was little, if any, microbial soil N uptake, as microbial biomass N increased by 0.3 mg/kg at only one site at the earliest date, in November 2005. Soil nitrate (NO3−) measured via resin capsules placed in situ for the study duration decreased at both sites with increasing C. Although we found no threshold dose of C, for a significant reduction in ruderal biomass, we calculated lowest significant doses of 240–640 kg C/ha.

Restoration Ecology↗

USGS2016

Soil phosphorus cycling in tropical soils: An ultisol and oxisol perspective

Phosphorus (P) is essential for life. It is the backbone of our DNA, provides energy for biological reactions, and is an integral component of cell membranes. As such, it is no surprise that P availability plays a strong role in regulating ecosystem structure and function (Wassen et al. 2005, Elser et al. 2007, Condit et al. 2013), and in determining our capacity to grow food for a burgeoning human population (Sharpley et al. 1997, Sims and Sharpley 2005, Lal 2009). Concerns that P supplies are insufficient to meet our species’ growing demands are on the rise (Richardson and Simpson 2011) and scientific and media outlets increasingly discuss P as an element worthy of our attention and concern (e.g., Cordell et al. 2009, Lougheed 2011, Edixhoven et al. 2013, Ulrich et al. 2013). Indeed, a number of groups are calling for the explicit stewardship of our planet’s P stocks (Schipper 2014, Withers et al. 2015). Yet a focus on P as a vital and limited resource is not new in the tropics, where an abundance of soils characterized by low P has resulted in a substantial, longstanding reliance on P inputs for tropical ecosystem function in both unmanaged and agriculture settings (Table 1, Figure 2; Sanchez 1976, Swap et al. 1992, Chadwick et al. 1999, Okin et al. 2004, Lal 2009). Indeed, there is a long history of cultivation in the tropics, where for thousands of years land management practices have included methods that effectively modify P availability for plant growth (e.g., Giardina et al. 2000, Lawrence and Schlesinger 2001, Vitousek et al. 2004, Lewis et al. 2015). Nevertheless, low soil fertility in tropical systems where fertilizer is scarce has enduringly been recognized as a major source of hunger and starvation (Sanchez and Buol 1975, Sanchez 2002, Sanchez and Swaminathan 2005).

Book chapter↗

USGS1996

Variability in surface energy flux partitioning during Washita '92: Resulting effects on Penman-Monteith and Priestley-Taylor parameters

During the Washita '92 field experiment, the local surface energy balance was evaluated at four locations in the USDA-ARS Little Washita River Watershed near Chickasha, OK, using the Bowen ratio-energy balance (BREB) approach. For any given day, differences in the partitioning of the available energy appeared to be mostly a function of the type of vegetation at the site, while the actual magnitude of the fluxes was mostly affected by cloud cover. The soil surface was initially wet, and gradually dried during the field experiment. However, there was not a corresponding decrease in the evaporative fraction, which would have indicated a decreasing contribution of soil evaporation to the total latent heat flux. Ground weather data indicated a large shift in the direction and magnitude of the surface winds, and a significant increase in air temperature and vapor pressure deficit. During this period, the evaporative fraction actually increased at two of the four sites. The response of the different sites to the changing near-surface atmospheric conditions was studied in more detail by evaluating the canopy resistance ( r c ) to evaporation using the Penman-Monteith equation and the Priestley-Taylor parameter (α). Midday averages of ( r c ) and (α) tended to decrease (increase) with increasing vapor pressure deficit for two of the sites while such a trend was not evident for the other two sites. Estimates of stomatal resistances indicated that significant plant physiological differences existed between the sites containing weedy vegetation versus the grasses at the pasture/rangeland sites. Even though soil moisture conditions were relatively wet, a was less than 1 at all sites and there was no trend in α as a function of surface soil moisture conditions. These findings suggest that vegetation types C in mixed agricultural /rangeland ecosystems can have significantly different responses to similar atmospheric forcing conditions.

Agricultural and Forest Meteorology↗

USGS2017

Ecosystem vs. community recovery 25 years after grass invasions and fire in a subtropical woodland

Despite a large body of research documenting invasive plant impacts, few studies have followed individual invaded sites over decades to observe how they change, and none have contrasted how compositional impacts from invasion compare to ecosystem-process impacts over a multi-decadal time-scale. Using direct measurements of plant density and composition and of ecosystems processes, we evaluate how ecosystem structure, above-ground net primary production (ANPP), and above-ground and soil nutrient pools compare over 25 years since fire and C4 grass invasions disrupted seasonally dry Hawaiian woodlands. We compare structure and function between primary woodland that has never burned and is largely native species-dominated, with sites that had been the same woodland type but burned in alien-grass-fuelled fires in the 1970s and 1980s. The sites have not experienced fires since 1987. We report here that woody plant composition and structure continue to be dramatically changed by the initial invasions and fires that occurred 25 years ago and invaders continue to dominate in burned sites. This is reflected in continued low plant carbon pools in burned compared to unburned sites. Yet ANPP and N storage, which were dramatically lower in the initial decade after invasive-grass fuelled fires, have increased and are now indistinguishable from values measured in intact woodlands. Soil carbon pools were resilient to both invasion and fire initially and over time. Above-ground net primary production has recovered because of invasion of burned sites by a non-native N-fixing tree rather than because of recovery of native species. This invasive N-fixing tree is unlikely to return C storage of the invaded sites to those of unburned woodland because of its tissue and growth characteristics and its interactions with invasive grasses. It does not facilitate native species but rather promotes a persistent invasive grass/N-fixer savanna. Synthesis. We conclude that fire, an unusual disturbance in this system, has perpetuated the dominance of these sites by invasive species and that despite the dramatic recovery of above-ground net primary production and N pools, the ecosystem continues to be in a distinctly different state than the pre-fire, pre-Melinis community. Thus, despite the absence of further disturbance (fire), there is no evidence that succession towards the original ecosystem is occurring. The fact that N pools and above-ground net primary production recover because of a new invader (Morella faya), highlights the unpredictability of ecosystem trajectories in the face of altered regional species pools.

Hawaii↗