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Food of the Pacific white-sided dolphin, Lagenorhynchus obliquidens, Dall's porpoise, Phocoenoides dalli, and northern fur seal, Callorhinus ursinus, off California and Washington

Our knowledge of the feeding habits of the Pacific white-sided dolphin, Lagenorhynchus obliquidens , and the Dall's porpoise, Phocoenoides dalli , is based on examination of the stomach contents of stranded animals, animals accidentally taken in commercial fishing gear, those taken in the western Pacific commercial fishery, and animals that died during capture attempts. Of these only a few were normally feeding animals taken at sea, whose stomach contents were thoroughly examined. Fished and squids previously identified from stomachs of dolphins and porpoises by various investigators are listed in Table 1. This paper documents the stomach contents of 44 Pacific white-sided dolphin and 9 Dall's porpoise collected at sea off California and Washington. All animals were collected by the authors during pelagic fur seal studies with the exception of three dolphins which were collected by a staff biologist during whale research voyages off California. Comparisons of stomach contents are made between the Pacific white-sided dolphins, Dall's porpoise, and northern fur seal, Callorhinus ursinus , collected near the same locations and usually on the same day. Mention of the dolphin, porpoise , and seal in this paper refers to the above-named species unless noted otherwise.

California, Washington↗

Open hydrology courseware using the United States Geological Survey’s National Water Census Data Portal

The U.S. Geological Survey (USGS) is the primary U.S. Government agency for water data collection and dissemination. In this role, the USGS has recently created and deployed a National Water Census Data Portal (NWC-DP) which provides access to streamflow, evapotransporation, precipitation, aquatic biology and other data at the national level. Recognizing the value of these data sets for hydrologic science education, this paper presents an effort to bridge the gap between pencil–and-paper-based hydrology curriculum and the USGS NWC-DP resource. Specifically, we have developed an R package, National Water Census Education (NWCEd), and five associated laboratory exercises that integrate R- and web-services-based access to the NWC-DP data sets. Using custom functions built into the NWCEd, students are able to access unprecedented amounts of hydrologic data from the NWC-DP, which can be applied to current hydrology curriculum and analyzed using NWCEd and a number of other open-source R tools.

Open Water Journal↗

Suggestions for new and aspiring graduate students in wildlife science

The transition from an undergraduate to a graduate program can be a difficult experience for students. Many undergraduates are unfamiliar with the process of preparing for graduate school, especially the search for a graduate program. Once in graduate school, they may be unfamiliar with requirements (both written and unwritten) and expectations, and they may also lack the necessary knowledge or skills to complete a graduate program successfully. For students in wildlife science graduate programs, these problems can become major issues, especially for students with undergraduate degrees in fields other than wildlife science (e.g., biology programs). Although several authors have provided advice to graduate students (Stearns 1987, Hucy 1987, Witz 1994), their suggestions either did not provide sufficient information for undergraduate students, or did not apply to graduate students in wildlife science. We provide information for undergraduates and new graduate students in wildlife science that is often unavailable prior to and during the initial phases of a graduate program. Our objectives are: (1) to provide advice on how to prepare for graduate school; (2) to provide an approach to locating, evaluating, and selecting potential graduate schools and a graduate advisor; (3) to describe the fundamentals of graduate school; and (4) to familiarize students with available tools and techniques to enhance a graduate program. We hope that university professors will provide this paper to undergraduates to aid those interested in attending graduate school. In addition, graduate advisors may wish to provide this paper to new graduate students as they begin their programs.

Wildlife Society Bulletin↗

Status of three-dimensional geological mapping and modeling activities in the U.S. Geological Survey

The U.S. Geological Survey (USGS), created in 1879, is the national geological survey for the United States and the sole science agency within its cabinet-level bureau, the Department of the Interior. The USGS has a broad mission, including: serving the Nation by providing reliable scientific information to describe and understand the Earth; minimize loss of life and property from natural disasters; manage water, biological, energy, and mineral resources; and enhance and protect quality of life. USGS scientific activities are organized around major topics, or Mission Areas, aligned with distinct science themes; three-dimensional (3-D) modelling typically supports research and project work within a specific Mission Area. The vastness, diversity, and complexity of the geological landscape of the United States has resulted in the creation of 3-D geological framework models that are local or regional in scale; a National-scale 3-D model is only beginning to evolve. This paper summarizes 3-D geological modeling at the USGS and does not discuss 3-D modeling that is conducted by other Federal agencies, state geological surveys, academia, or industry within the U.S. This paper updates and expands upon a similar status report of USGS 3-D modeling activities of Jacobsen et al. (2011).

Report↗

Recreational impacts to wildlife: Managing visitors and resources to protect wildlife

Publication Abstract: Visitor use management is essential for maximizing benefits for visitors while achieving and maintaining desired resource conditions and visitor experiences on federally managed lands and waters. Visitor capacity, a component of visitor use management, is defined as the maximum amounts and types of visitor use that an area can accommodate while achieving and maintaining the desired resource conditions and visitor experiences that are consistent with the purposes for which the area was established. This visitor capacity guidebook, in combination with the “Visitor Use Management Framework” (the framework), provides managers with processes to collaboratively develop long-term strategies to manage the amounts and types of visitor use to protect resources, improve access, connect visitors to key experiences, and achieve desired conditions. The purpose of this guidebook is to provide cohesive guidance on identifying and implementing visitor capacity on federally managed lands and waters. Similar to the framework, the sliding scale of analysis is discussed throughout this guidebook to ensure the investment of time, money, and other resources for a project is commensurate with the complexity of the project and the consequences of the decision. Overall, this guidebook is meant to expand on the framework and guide a professional and consistent approach to identifying and implementing visitor capacity. Paper Abstract: Most protected natural areas, including parks, forests, and wildlife refuges, are managed under a dual mandate to preserve predominantly natural settings and processes while also accommodating recreational visitation. Visitor activities can have deleterious impacts to protected area vegetation, soil, water, wildlife, and cultural resources. The term impact denotes undesirable visitor-related effects to natural resources and/or wildlife. This paper reviews the management of recreation impacts to wildlife, including discussions of influential factors, impact indicators, and the range of management responses. This information is provided to assist recreation and land managers in avoiding or minimizing visitor impact to wildlife, particularly related to decision-making within the new Visitor Use Management (VUM) framework. Such decision-making requires a thorough understanding of the different types of wildlife impact and the use-related, environmental, and managerial factors that influence them.

Report↗

Current trends and future directions in swan research: Insights from the 6th International Swan Symposium

Given their popularity with researchers and public alike, together with their welldocumented importance in aquatic and terrestrial ecosystems, fundamental and applied research on swans continues to develop in the 21st century. The 6th International Swan Symposium (6th ISS), was held at the Estonian University of Life Sciences in Tartu, Estonia, in October 2018. The symposium brought together 101 delegates from 17 countries, with presentations on a range of topics on Cygnus and Coscoroba species, including monitoring, habitat and resource use, demography, movements and migration, and threats and conservation. The proceedings of the 6th ISS in this special issue of Wildfowl include select papers on swan research presented at the 6th ISS, covering a wide range of species, systems and issues. This paper presents a synthesis of the 6th ISS and an overview of current trends and future directions in swan research. Despite progress on many topics, southern hemisphere swan species continue to receive less attention than their northern hemisphere counterparts, whilst facing many of the same pressures. It is clear that, given the challenges facing swan researchers in the twenty-first century, international cooperation will continue to be vital. Swans are highly mobile animals and many populations undertake migrations spanning thousands of kilometres, and crucially do not recognise human geographic and political borders. Such international collaborations will be particularly important in coordinating future monitoring and conservation activities. The IUCN-SSC/Wetlands International Swan Specialist Group (SSG) will continue to facilitate international collaborations and communication among the global network of swan researchers, through its activities, website and annual newsletter. Given the substantial challenges and knowledge gaps documented here, there is no doubt that swan researchers will continue to benefit from regular symposia to share information and develop collaborations towards understanding and addressing emerging conservation issues. As such, we recommend holding International Swan Symposia every 4–5 years.

Wildfowl↗

Human-cougar interactions: A literature review related to common management questions

Interactions between humans and cougars ( Puma concolor ) present unique challenges for wildlife managers; reducing occurrences that lead to conflict is a priority for state and provincial wildlife agencies throughout western North America, including Washington. With an increase in management emphasis of human-wildlife conflict resolution, a growing body of scientific literature related to cougar wildland-urban ecology and the factors that contribute to interactions between cougars and people has developed. Based on discussions with the Fish and Wildlife Commission, our 10-member Human-Cougar Interaction Science Review Team assessed both the analytical and ecological merits of current literature, focusing on data and methods, to summarize the current state of knowledge on human-cougar interactions and factors affecting these interactions. We did not use our review findings to provide management recommendations or evaluate/suggest policy alternatives, but we did highlight important information gaps, research needs, and proposed strategies for conducting scientific investigations to benefit managers and policy makers in the future. We used bibliographic lists, keyword searches in research databases, and new literature encountered as citations within papers we reviewed to identify 96 potential studies for review. We evaluated 41 studies that aligned with eight commonly asked questions regarding how various factors contribute to cougar proximity to, and interactions with people. Our review concluded that the roles of cougar removals (Question 1), cougar population size or trajectory (Question 2), the abundance or diversity of prey (Question 3), human population size, distribution, or recreation levels (Question 6), human attitudes (Question 7), and competition with other large carnivores (Question 8) in cougar interactions with people remain uncertain. We found the studies evaluating the efficacy of nonlethal deterrents (Question 4) provided some evidence that these methods reduce conflict, most notably that flashing lights can reduce interactions in specific situations. Our review of papers investigating the role of landscape characteristics (Question 5) revealed spatial ecology to be the most reliably studied and best understood facet of cougar wildland-urban ecology; study designs in these investigations were also the most rigorous. Most cougar use, and subsequent interactions with people, occur at the wildland-urban interface or in exurban and rural residential settings immediately adjacent because these habitats provide both abundant native prey (deer) and stalking cover, or they retain enough native landcover, connectivity, and prey to support cougar use, but with a human presence at a level that does not substantially deter cougars. We identified only a limited number of informative studies in our review, primarily because many studies did not collect data to specifically address relevant management questions after developing testable hypotheses. Much of the literature we reviewed was derived from ad hoc mining of pre-existing data that had been collected for other routine reasons, data were often not assessed for accuracy, and confounding factors were inadequately addressed. Consequently, many factors theorized to contribute to cougar interactions with people require more rigorous investigation. Because wildland-urban systems are complex, and interactions encompass both human and cougar behavior, we recommend the use of long-term studies that incorporate both ecological and anthropogenic factors within a control-treatment design with replicate study sites to address questions with direct management relevance.

Report↗

Fifth special report of the Hawaiian Volcano Observatory of the Hawaiian Volcano Research Association and the U.S. Geological Survey: Abrasion hardness

After reviewing the work of sclerometry, this paper shows that yielding and relative softness are the mechanical basis of what should be called malacometry. The experiments have been made with diamond drills, ring cuts, end millers and grinding wheels. Auerbach's "limited scope of the Mohs list" is quantitatively confirmed. The wear of diamonds is examined. A program is carried out, for rotary or annular abrasion by diamond under three applications of energy, each progressively slower. A selected commercial talc is the control substance of softness value 100. The instruments used are synchronous motors, drill presses, wheel grinders, and watchmaker lathes. Some 200 minerals, woods, metals, glasses and plastics were originally measured. Hardness tables and curves are shown for comparison with volumetric abradability. For a Mohs succession the softer substances abrade relatively more under higher energy of contact friction, and any one substance shows higher relative values under lower energy of attrition; in other words, under slower scratching. An artificially cut diamond octahedron gives more consistent results than a natural crystal, under light pressures. Standard successions of relative abradability measurements do not hold good under different energies of attack. Functions of plasticity, brittleness, cleavage, powder lubricity, ductility and the like introduce various anomalies, and constancy of pressure varies with variable yielding. The supposition that rhythmic instrumental abrading will hold its mechanical constants, while the substance attacked yields in accord with its own surface molecular mobility relative to a control substance, is only approximately true. At low energies the approximation is better than at high, but at high speeds the wear of tool is less. Hence the advantage of using with slow speed a replaceable tool. Substances of different categories such as steels and woods, differ in behavior from minerals. The Mohs System has the great advantage of extending the controls from mineral to mineral up through the whole scale, and is purely qualitative. It is not numerically quantitative at all in terms of equal units. A principal result of this investigation is that 80 per cent of the Mohs Scale, Numbers 3 to 10, are by common consent within 1 per cent of a malacometric scale numbered 1 to 100. The scientists who determined this relation were the sclerometry investigators of the nineteenth century, who mistakenly thought that the wide intervals of sclerometry are between the hard minerals. They used the reciprocals of the measures of yielding. The simple scratch tester finally arrived at is quite different from the instruments of Parts II and III. It eliminates diamond drilling, retains the Mohs controls and utilizes a dental grinding wheel and a modern low speed motor. The object of this research has been to design a simple instrument for many uses, especially for the mechanic's shop. It is planned for manufacture at an early date. The author is indebted to Dr. Earl Ingerson, Chief, Geochemistry and Petrology Branch, for critical correction and approval of this paper, by authority of the Director, U. S. Geological Survey.

Report of the Hawaiian Volcano Observatory↗

Ten quick tips to get you started with Bayesian statistics

Bayesian statistics is a framework in which our knowledge about unknown quantities of interest (especially parameters) is updated with the information in observed data, though it can also be viewed as simply another method to fit a statistical model. It has become popular in many branches of biology. For context, five of the ten most cited papers in Web of Science with keywords 'Bayesian statistics' are related to biology (as of August 19, 2024). Bayesian statistics is particularly valuable for biology because it allows researchers to incorporate prior knowledge, handle complex systems, and work effectively with limited or messy data. However, most biologists are trained in frequentist techniques, and the learning curve to become fluent in Bayesian statistics may be perceived as too time-consuming to undertake, or the prospect of adopting an unfamiliar statistical framework can simply appear too daunting. We provide a list of 10 tips to help you get started with Bayesian statistics. You can also refer to the Glossary for definitions of the technical terms. This paper isn’t just for newcomers; even those with some experience in Bayesian methods may find it a useful roadmap to design, conduct, and publish Bayesian analyses. We’ve drawn mainly on our experience teaching and working with ecologists, but we hope these tips will be relevant to a broader audience of biologists. For those seeking to deepen their understanding, we point to more comprehensive resources that offer in-depth exploration of Bayesian statistics.

HAL Open Science↗

Critical habitat for ovigerous Dungeness crabs

The Dungeness crab, Cancer magister , supports an important fishery in the northeastern Pacific Ocean, yet there is limited knowledge of ovigerous female brooding locations and brooding behavior. Our earlier research suggests that ovigerous crabs aggregate at the same brooding locations for many years. Within these locations, ovigerous females occur in high densities, with the majority of the aggregation buried within the sediment. These locations often have similar water depths and sediment types and appear to be critical for this life history stage. Our study was designed to examine the bathymetric distribution of Dungeness crabs in bays with and without sea otters at eight locations within the Glacier Bay area by conducting transects with a video-equipped manned submersible. Two of the bays investigated contained large aggregations of ovigerous females. At both sites the substrate was composed primarily of sand. However, only a small percentage of the 33 km of transects were classified as sand. These data suggest that sand substrate may be a limiting resource. Since crab brooding aggregations represent a large portion of the crab population within a small area, and because they are a critical component of Dungeness life history, areas with these characteristics need to be investigated, mapped, and protected from development or exploitation. The areas requiring protection from the impact of anthropogenic wastes, fishing, and logging activities could be quite small, thus limiting conflict with alternative users.

Conference Paper↗

Polar bear management in Alaska 1997-2000

Since the Twelfth Working Meeting of the IUCN/SSC Polar Bear Specialist Group in 1997, a number of changes in the management of polar bears have occurred in Alaska. On October 16, 2000, the governments of the United States and the Russian Federation signed the “Agreement on the Conservation and Management of the Alaska-Chukotka Polar Bear Population.” This agreement provides substantial benefits for the effective conservation of polar bears shared between the U.S. and Russia. It will require enactment of enabling legislation by the U.S. Congress and other steps by Russia before the agreement has the force of law. A copy of the agreement is included as Appendix 1 to this report. Also, during this period, regulations were developed to implement 1994 amendments to the Marine Mammal Protection Act (MMPA), which allow polar bear trophies taken in approved Canadian populations by U.S. citizens to be imported into the U.S. A summary of the regulatory actions and a table listing populations approved for importation and the number of polar bears imported into the U.S. since 1997 is included in this report. Regarding oil and gas activities in polar bear habitat, three sets of regulations were published authorizing the incidental, non-intentional, taking of small numbers of polar bears concurrent to oil and gas activities. Cooperation continued with the Alaska Nanuuq Commission, representing the polar bear hunting communities in Alaska, as well as with the North Slope Borough and the Inuvialuit Game Council in their agreement for the management of the Southern Beaufort Sea polar bear population. Harvest summaries and technical assistance in designing and assistance in conducting a National Park Service/Alaska Nanuuq Commission study to collect traditional ecological knowledge of polar bear habitat use in Chukotka were provided. In addition, a long-range plan was developed to address and minimize polar bear-human conflicts in North Slope communities. We continued to monitor the harvest of polar bears in Alaska and collect and analyze specimens for presence and level of organochlorine compounds and trace elements. A paper on genetic assessment of hunter reported sex of harvested bears was recently published (Schliebe et al. 1999). Population status and trend assessment efforts continued. An aerial survey of polar bears in the Eastern Chukchi Sea and western portions of the Southern Beaufort Sea was conducted from the U.S. Coast Guard icebreaker “Polar Star” in August 2000. The first year of a multi-year survey of barrier islands and coastlines during the open water and freeze-up phase was conducted in the central Southern Beaufort Sea during fall 2000.

Alaska↗

A preliminary environmental site investigation for a bridge over the Mississippi River at Moline, Illinois

The Illinois State Geological Survey completed a preliminary environmental site assessment along the alignment of Interstate 74 (I-74) and its bridge over the Mississippi River for the Illinois Department of Transportation (IDOT) in 2002. The objective of the study was to determine if any of the parcels proposed for acquisition or on which soil excavation was intended were sufficiently contaminated to require additional investigation by a commercial environmental consultant under contract to IDOT and to identify potential natural hazards that might have an impact on the proposed construction project. VOC were detected at 13 of 37 sites tested for VOC. These sites included an elevator manufacturer, former foundries, former and active machine shops, former and active gasoline stations, and a former automobile dealer. PAH above TACO Tier 1 residential standards were detected on an island in the Mississippi River. PCB was detected at a former foundry and a control box for a railroad. Magnetic anomalies that might indicate the presence of UST were detected in a park that formerly had been the site of a city garage, adjacent to a parking lot that formerly contained an automobile dealer, and at the sites of three former gasoline stations. These studies helped IDOT to save millions of dollars in highway construction projects. This is an abstract of a paper presented in Contaminated Soils, Sediments and Water: Success and Challenges (Massachusetts Fall 2005).

Conference Paper↗

Forecasting runout of rock and debris avalanches

Physically based mathematical models and statistically based empirical equations each may provide useful means of forecasting runout of rock and debris avalanches. This paper compares the foundations, strengths, and limitations of a physically based model and a statistically based forecasting method, both of which were developed to predict runout across three-dimensional topography. The chief advantage of the physically based model results from its ties to physical conservation laws and well-tested axioms of soil and rock mechanics, such as the Coulomb friction rule and effective-stress principle. The output of this model provides detailed information about the dynamics of avalanche runout, at the expense of high demands for accurate input data, numerical computation, and experimental testing. In comparison, the statistical method requires relatively modest computation and no input data except identification of prospective avalanche source areas and a range of postulated avalanche volumes. Like the physically based model, the statistical method yields maps of predicted runout, but it provides no information on runout dynamics. Although the two methods differ significantly in their structure and objectives, insights gained from one method can aid refinement of the other.

Conference Paper↗

S2HM must be real-time or not?

Seismic structural health monitoring (S 2 HM) has advanced significantly in the last three decades. However, currently there is no consensus on the need for real-time processing of data acquired during an earthquake. Numerous applications exist whereby S 2 HM-equipped systems record valuable seismic response data. A delayed use of the seismic data prohibits timely discovery of hidden damages in a structure which, in turn, possibly increases its vulnerability during events to follow – with increased risk to occupants. Such risks are of particular concern when, for example, there are long-distance/long period effects e.g. for tall buildings and long-span bridges that are significantly affected by events that originate at far distances. These phenomena necessitate near real-time monitored data to make timely data-based informed decisions on the health or performance of the affected structure. The paper discusses criteria for functionality and occupiability thresholds in actual applications.

Conference Paper↗

Creating annotations for web ontology language ontology generated from relational databases

Many approaches that have been proposed that allow users to create a Web Ontology Language (OWL) ontology from a relational database fail to include metadata that are inherent to the database tables. Without metadata, the resulting ontology lacks annotation properties. These properties are key when performing ontology alignment. This paper proposes a method to include relevant metadata through annotation properties to OWL ontologies, which furthers the ability to integrate and use data from multiple unique ontologies. The described method is applied to geospatial data collected from The National Map, a data source hosted by the U. S. Geological Survey. Following that method, an ontology was manually created that used the metadata from The National Map. Because a manual approach is prone to human error, an automated approach to storing and converting metadata into annotation properties is discussed.

Conference Paper↗

An ontology design pattern for surface water features

Surface water is a primary concept of human experience but concepts are captured in cultures and languages in many different ways. Still, many commonalities exist due to the physical basis of many of the properties and categories. An abstract ontology of surface water features based only on those physical properties of landscape features has the best potential for serving as a foundational domain ontology for other more context-dependent ontologies. The Surface Water ontology design pattern was developed both for domain knowledge distillation and to serve as a conceptual building-block for more complex or specialized surface water ontologies. A fundamental distinction is made in this ontology between landscape features that act as containers (e.g., stream channels, basins) and the bodies of water (e.g., rivers, lakes) that occupy those containers. Concave (container) landforms semantics are specified in a Dry module and the semantics of contained bodies of water in a Wet module. The pattern is implemented in OWL, but Description Logic axioms and a detailed explanation is provided in this paper. The OWL ontology will be an important contribution to Semantic Web vocabulary for annotating surface water feature datasets. Also provided is a discussion of why there is a need to complement the pattern with other ontologies, especially the previously developed Surface Network pattern. Finally, the practical value of the pattern in semantic querying of surface water datasets is illustrated through an annotated geospatial dataset and sample queries using the classes of the Surface Water pattern.

Conference Paper↗

A micro-UAS to start prescribed fires

Prescribed fires have many benefits, but existing ignition methods are dangerous, costly, or inefficient. This paper presents the design and evaluation of a micro-UAS that can start a prescribed fire from the air, while being operated from a safe distance and without the costs associated with aerial ignition from a manned aircraft. We evaluate the performance of the system in extensive controlled tests indoors. We verify the capabilities of the system to perform interior ignitions, a normally dangerous task, through the ignition of two prescribed fires alongside wildland firefighters.

Conference Paper↗

GNIS-LD: Serving and visualizing the Geographic Names Information System Gazetteer as linked data

In this dataset description paper we introduce the GNIS-LD, an authoritative and public domain Linked Dataset derived from the Geographic Names Information System (GNIS) which was developed by the U.S. Geological Survey (USGS) and the U.S. Board on Geographic Names. GNIS provides data about current, as well as historical, physical, and cultural geographic features in the United States. We describe the dataset, introduce an ontology for geographic feature types, and demonstrate the utility of recent linked geographic data contributions made in conjunction with the development of this resource. Co-reference resolution links to GeoNames.org and DBpedia are provided in the form of owl:sameAs relations. Finally, we point out how the adapted workflow is foundational for complex Digital Line Graph (DLG) data from the USGS National Map and how the GNIS-LD data can be integrated with DLG and other data sources such as sensor observations.

Conference Paper↗