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Signatures of adaptive divergence among populations of an avian species of conservation

Understanding the genetic underpinning of adaptive divergence among populations is a key goal of evolutionary biology and conservation. Gunnison sage‐grouse ( Centrocercus minimus ) is a sagebrush obligate species with a constricted range consisting of seven discrete populations, each with distinctly different habitat and climatic conditions. Though geographically close, populations have low levels of natural gene flow resulting in relatively high levels of differentiation. Here, we use 15,033 SNP loci in genomic outlier analyses, genotype–environment association analyses, and gene ontology enrichment tests to examine patterns of putatively adaptive genetic differentiation in an avian species of conservation concern. We found 411 loci within 5 kbp of 289 putative genes associated with biological functions or pathways that were overrepresented in the assemblage of outlier SNPs. The identified gene set was enriched for cytochrome P450 gene family members (CYP4V2, CYP2R1, CYP2C23B, CYP4B1) and could impact metabolism of plant secondary metabolites, a critical challenge for sagebrush obligates. Additionally, the gene set was also enriched with members potentially involved in antiviral response (DEAD box helicase gene family and SETX). Our results provide a first look at local adaption for isolated populations of a single species and suggest adaptive divergence in multiple metabolic and biochemical pathways may be occurring. This information can be useful in managing this species of conservation concern, for example, to identify unique populations to conserve, avoid translocation or release of individuals that may swamp locally adapted genetic diversity, or guide habitat restoration efforts.

Arizona, Colorado, New Mexico, Utah↗

Effect of land-applied biosolids on surface-water nutrient yields and groundwater quality in Orange County, North Carolina

Land application of municipal wastewater biosolids is the most common method of biosolids management used in North Carolina and the United States. Biosolids have characteristics that may be beneficial to soil and plants. Land application can take advantage of these beneficial qualities, whereas disposal in landfills or incineration poses no beneficial use of the waste. Some independent studies and laboratory analysis, however, have shown that land-applied biosolids can pose a threat to human health and surface-water and groundwater quality. The effect of municipal biosolids applied to agriculture fields is largely unknown in relation to the delivery of nutrients, bacteria, metals, and contaminants of emerging concern to surface-water and groundwater resources. Therefore, the North Carolina Department of Environment and Natural Resources (NCDENR) collaborated with the U.S. Geological Survey (USGS) through the 319 Nonpoint Source Program to better understand the transport of nutrients and bacteria from biosolids application fields to groundwater and surface water and to provide a scientific basis for evaluating the effectiveness of the current regulations. The USGS conducted a paired agricultural watershed study in the Collins Creek and Cane Creek Reservoir watersheds in Orange County, North Carolina. Field activities were conducted from March 2011 through May 2013 at two field study sites, including biosolids field application sites owned by Orange County Water and Sewer Authority (OWASA) in the Collins Creek watershed and a background study site in the Cane Creek watershed that has no fields receiving biosolids applications. Samples of biosolids source material and soil were collected from the land-application fields for laboratory analyses. Soil samples were also collected from a background agricultural field in the Cane Creek watershed that has never received land-applied municipal biosolids. Shallow groundwater samples were collected quarterly from new monitoring wells installed by NCDENR along the edge of the biosolids land-application fields and a background agricultural field for laboratory analyses. Two surface-water monitoring sites were established on Collins Creek to compute continuous streamflow and collect discrete baseflow and stormwater runoff water-quality data upstream and downstream from the biosolids land-application fields. Surface water-quality samples were also collected for baseflow and stormwater runoff conditions at an existing USGS streamgage on Cane Creek to monitor water-quality conditions in the background study watershed. The study primarily focused on nutrients and bacteria; however, data for field properties and water-quality constituents, including metals, major ions, and contaminants of emerging concern (household-, industrial-, and agricultural-use compounds, pharmaceutical compounds, hormones, and antibiotics) also were collected and used in the analyses. There were no exceedances of the 10 elements with designated U.S. Environmental Protection Agency (EPA) ceiling concentrations for land-applied biosolids in any of the biosolids samples. Treatment processes and storage techniques used by OWASA are effective in eliminating Escherichia coli and fecal coliform bacteria from biosolids. Copper, molybdenum, total Kjeldahl nitrogen, and total phosphorus were elevated in the soil from biosolids land-application fields relative to the background field. The relative richness of these constituents in the biosolids land-application fields is consistent with biosolids being the source of the elevated concentrations given the relatively high concentrations of these constituents in the biosolids samples that were collected. Shallow groundwater in the transitional zone wells, which were located adjacent to and topographically downgradient from all the biosolids land-application fields, were found to be statistically different and had higher nitrate concentrations (medians greater than 12 milligrams per liter) than all the other wells sampled as part of the study. Surface-water nutrient concentrations and yields, primarily nitrate, were higher at the monitoring site on Collins Creek downstream from the biosolids land-application fields than the other study sites that drained watersheds without biosolids land application. The largest differences in concentrations between sites were measured at baseflow conditions, which indicate that the main cause of these differences, particularly between Cane Creek and the Collins Creek site downstream from the OWASA application fields, is related to nitrate contribution from the shallow groundwater. Contaminants of emerging concern were detected in approximately 40 percent of the laboratory analyses of the biosolids samples and more frequently in soil samples from the biosolids land-application fields (approximately 40 percent of laboratory analyses) relative to the soil samples from the background field (approximately 12 percent of laboratory analyses). However, contaminants of emerging concern detected in the laboratory analysis for this study do not appear to be good indicators of human-waste contaminants derived from land-applied biosolids in groundwater or surface-water because the number of detections and concentrations at the background wells and surface-water monitoring sites are similar to or higher than those at wells and monitoring sites adjacent to or downstream from the biosolids land-application fields. The data, analysis, and conclusions associated with this study can be used by regulatory agencies, resource managers, and wastewater-treatment operators to (1) better understand the quantity and characteristics of nutrients, bacteria, metals, and contaminants of emerging concern that are transported away from biosolids land-application fields to surface water and groundwater under current regulations for the purposes of establishing effective total maximum daily loads (TMDLs) and restoring impaired water resources, (2) assess how well existing regulations protect waters of the State and potentially recommend effective changes to regulations or land-application procedures, and (3) establish a framework for developing guidance on effective techniques for monitoring and regulatory enforcement of permitted biosolids land-application fields.

North Carolina↗

Topographic, bioclimatic, and vegetation characteristics of three ecoregion classification systems in North America: Comparisons along continent-wide transects

Ecoregion classification systems are increasingly used for policy and management decisions, particularly among conservation and natural resource managers. A number of ecoregion classification systems are currently available, with each system defining ecoregions using different classification methods and different types of data. As a result, each classification system describes a unique set of ecoregions. To help potential users choose the most appropriate ecoregion system for their particular application, we used three latitudinal transects across North America to compare the boundaries and environmental characteristics of three ecoregion classification systems [Ku??chler, World Wildlife Fund (WWF), and Bailey]. A variety of variables were used to evaluate the three systems, including woody plant species richness, normalized difference in vegetation index (NDVI), and bioclimatic variables (e.g., mean temperature of the coldest month) along each transect. Our results are dominated by geographic patterns in temperature, which are generally aligned north-south, and in moisture, which are generally aligned east-west. In the west, the dramatic changes in physiography, climate, and vegetation impose stronger controls on ecoregion boundaries than in the east. The Ku??chler system has the greatest number of ecoregions on all three transects, but does not necessarily have the highest degree of internal consistency within its ecoregions with regard to the bioclimatic and species richness data. In general, the WWF system appears to track climatic and floristic variables the best of the three systems, but not in all regions on all transects. ?? 2005 Springer Science+Business Media, Inc.

Environmental Management↗

Investigation of Contaminated Groundwater at Solid Waste Management Unit 12, Naval Weapons Station Charleston, North Charleston, South Carolina, 2008

The U.S. Geological Survey and the Naval Facilities Engineering Command Southeast investigated natural and engineered remediation of chlorinated volatile organic compound (VOC) groundwater contamination at Solid Waste Management Unit 12 at the Naval Weapons Station Charleston, North Charleston, South Carolina, beginning in 2000. The primary contaminants of interest in the study are tetrachloroethene, 1,1,1-trichloroethane, trichloroethene, cis-1,2-dichloroethene, vinyl chloride, 1,1-dichloroethane, and 1,1-dichloroethene. Engineered remediation aspects at the site consist of a zero-valent-iron permeable reactive barrier (PRB) installed in December 2002 intercepting the contamination plume and a phytoremediation test stand of loblolly pine trees planted in the source area in May 2003. The U.S. Geological Survey planted an additional phytoremediation test stand of loblolly pine trees on the upgradient side of the southern end of the PRB in February 2008. At least once during the summer, however, the trees were inadvertently mowed during lawn cutting activity. The PRB along the main axis of the contaminant plume appears to be actively removing contamination. In contrast to the central area of the PRB, the data from the southern end of the PRB indicate that contaminants are moving around the PRB. Concentrations in wells upgradient from the PRB showed a general decrease in VOC concentrations. VOC concentrations in some wells in the forest downgradient from the PRB showed a sharp increase in 2005, followed by a decrease in 2006. Farther downgradient in the forest, the VOC concentrations began to increase in 2007 and continued to increase into 2008. The VOC-concentration changes in groundwater beneath the forest appear to indicate movement of a groundwater-contaminant pulse through the forest. It also is possible that the data may represent lateral shifting of the plume in response to changes in groundwater-flow direction.

South Carolina↗

Effects of wet- and dry-season fires on Jacquemontia curtisii, a south Florida pine forest endemic

South Florida pine forests have a diverse endemic flora that has evolved under the influence of recurrent fire. We studied the response of Jacquemontia curtisii Peter ex Hallier f. (pineland clustervine), a perennial herbaceous member of that flora, to experimental fires during wet and dry seasons. In each of three populations, three treatments were applied: wet-season (June) prescribed fire, dry-season (January) prescribed fire, and an unburned control. Flowering, fruiting, and seedling establishment were followed for up to one year. Mortality of adult plants was twice as great after wet-season burns than after dry-season burns even though fire temperatures were higher in the dry-season burns. Within a season of burning, mortality was greater for the more severely burned plants or the smaller plants. Wet-season burns produced over three times more flowers than not burning, in spite of mortality of more than half the plants. Burning stimulated germination from the soil seed bank. Dry-season burns resulted in five times more seedlings than wet-season burns and more of these seedlings were alive one year after the burn. It is likely that the long-term viability of Jacquemontia curtisii populations is favored by diversity in fire season and severity.

Florida↗

Assessing the extent and diversity of riparian ecosystems in Sonora, Mexico

Conservation of forested riparian ecosystems is of international concern. Relatively little is known of the structure, composition, diversity, and extent of riparian ecosystems in Mexico. We used high- and low-resolution satellite imagery from 2000 to 2006, and ground-based sampling in 2006, to assess the spatial pattern, extent, and woody plant composition of riparian forests across a range of spatial scales for the state of Sonora, Mexico. For all 3rd and higher order streams, river bottomlands with riparian forests occupied a total area of 2,301 km2. Where forested bottomlands remained, on average, 34% of the area had been converted to agriculture while 39% remained forested. We estimated that the total area of riparian forest along the principal streams was 897 km2. Including fencerow trees, the total forested riparian area was 944 km2, or 0.5% of the total land area of Sonora. Ground-based sampling of woody riparian vegetation consisted of 92, 50 m radius circular plots. About 79 woody plant species were noted. The most important tree species, based on cover and frequency, were willow species Salix spp. (primarily S. goodingii and S. bonplandiana), mesquite species Prosopis spp. (primarily P. velutina), and Fremont cottonwood Populus fremontii. Woody riparian taxa at the reach scale showed a trend of increasing diversity from north to south within Sonora. Species richness was greatest in the willow-bald cypress Taxodium distichum var. mexicanum-Mexican cottonwood P. mexicana subsp. dimorphia ecosystem. The non-native tamarisk Tamarix spp. was rare, occurring at just three study reaches. Relatively natural stream flow patterns and fluvial disturbance regimes likely limit its establishment and spread. ?? 2008 Springer Science + Business Media BV.

Biodiversity and Conservation↗

Assessment of tsunami hazard to the U.S. Atlantic margin

Tsunami hazard is a very low-probability, but potentially high-risk natural hazard, posing unique challenges to scientists and policy makers trying to mitigate its impacts. These challenges are illustrated in this assessment of tsunami hazard to the U.S. Atlantic margin. Seismic activity along the U.S. Atlantic margin in general is low, and confirmed paleo-tsunami deposits have not yet been found, suggesting a very low rate of hazard. However, the devastating 1929 Grand Banks tsunami along the Atlantic margin of Canada shows that these events continue to occur. Densely populated areas, extensive industrial and port facilities, and the presence of ten nuclear power plants along the coast, make this region highly vulnerable to flooding by tsunamis and therefore even low-probability events need to be evaluated. We can presently draw several tentative conclusions regarding tsunami hazard to the U.S. Atlantic coast. Landslide tsunamis likely constitute the biggest tsunami hazard to the coast. Only a small number of landslides have so far been dated and they are generally older than 10,000 years. The geographical distribution of landslides along the margin is expected to be uneven and to depend on the distribution of seismic activity along the margin and on the geographical distribution of Pleistocene sediment. We do not see evidence that gas hydrate dissociation contributes to the generation of landslides along the U.S. Atlantic margin. Analysis of landslide statistics along the fluvial and glacial portions of the margin indicate that most of the landslides are translational, were probably initiated by seismic acceleration, and failed as aggregate slope failures. How tsunamis are generated from aggregate landslides remains however, unclear. Estimates of the recurrence interval of earthquakes along the continental slope may provide maximum estimates for the recurrence interval of landslide along the margin. Tsunamis caused by atmospheric disturbances and by coastal earthquakes may be more frequent than those generated by landslides, but their amplitudes are probably smaller. Among the possible far-field earthquake sources, only earthquakes located within the Gulf of Cadiz or west of the Tore-Madeira Rise are likely to affect the U.S. coast. It is questionable whether earthquakes on the Puerto Rico Trench are capable of producing a large enough tsunami that will affect the U.S. Atlantic coast. More information is needed to evaluate the seismic potential of the northern Cuba fold-and-thrust belt. The hazard from a volcano flank collapse in the Canary Islands is likely smaller than originally stated, and there is not enough information to evaluate the magnitude and frequency of flank collapse from the Azores Islands. Both deterministic and probabilistic methods to evaluate the tsunami hazard from the margin are available for application to the Atlantic margin, but their implementation requires more information than is currently available.

Marine Geology↗

Mineral commodity profiles: nitrogen

Overview -- Nitrogen (N) is an essential element of life and a part of all animal and plant proteins. As a part of the DNA and RNA molecules, nitrogen is an essential constituent of each individual's genetic blueprint. As an essential element in the chlorophyll molecule, nitrogen is vital to a plant's ability to photosynthesize. Some crop plants, such as alfalfa, peas, peanuts, and soybeans, can convert atmospheric nitrogen into a usable form by a process referred to as 'fixation.' Most of the nitrogen that is available for crop production, however, comes from decomposing animal and plant waste or from commercially produced fertilizers. Commercial fertilizers contain nitrogen in the form of ammonium and/or nitrate or in a form that is quickly converted to the ammonium or nitrate form once the fertilizer is applied to the soil. Ammonia is generally the source of nitrogen in fertilizers. Anhydrous ammonia is commercially produced by reacting nitrogen with hydrogen under high temperatures and pressures. The source of nitrogen is the atmosphere, which is almost 80 percent nitrogen. Hydrogen is derived from a variety of raw materials, which include water, and crude oil, coal, and natural gas hydrocarbons. Nitrogen-based fertilizers are produced from ammonia feedstocks through a variety of chemical processes. Small quantities of nitrates are produced from mineral resources principally in Chile. In 2002, anhydrous ammonia and other nitrogen materials were produced in more than 70 countries. Global ammonia production was 108 million metric tons (Mt) of contained nitrogen. With 28 percent of this total, China was the largest producer of ammonia. Asia contributed 46 percent of total world ammonia production, and countries of the former U.S.S.R. represented 13 percent. North America also produced 13 percent of the total; Western Europe, 9 percent; the Middle East, 7 percent; Central America and South America, 5 percent; Eastern Europe, 3 percent; and Africa and Oceania contributed the remaining 4 percent (International Fertilizer Industry Association, 2003b, p. 1-4). In 2002, world ammonia exports were 13.1 Mt of contained nitrogen. Trinidad and Tobago (22 percent), Russia (18 percent), Ukraine (10 percent), and Indonesia (7 percent) accounted for 57 percent of the world total. The largest importing regions were North America with 36 percent of the total followed by Western Europe with 23 percent and Asia with 22 percent (International Fertilizer Industry Association, 2003b, p. 5L-11). In 2002, world urea production was 51.4 Mt of contained nitrogen, and exports were 12.0 Mt of contained nitrogen. China and India, which were the two largest producing countries, accounted for 48 percent of world production. The United States and Canada produced about 10 percent of the total. Russia and Ukraine together accounted for 28 percent of total urea exports; Central America and South America, 27 percent; and Asia, North America, and Western Europe, 10 percent each. North America accounted for 36 percent of the total urea imports; Western Europe, 23 percent; and Asia, 22 percent (International Fertilizer Industry Association, 2003f, p. 1-15). Ammonia production capacity in North America and Western Europe is projected to decline through 2004, and capacity in other world regions is projected to increase. Fluctuating natural gas prices are mainly responsible for the capacity decline in North America. Ammonia production capacity is continuing to shift to world regions that have abundant sources of natural gas, and away from those where costs (raw material, labor, environmental compliance) are higher.

Open-File Report↗

Particulate, colloidal, and dissolved-phase associations of plutonium and americium in a water sample from well 1587 at the Rocky Flats Plant, Colorado

In November 1991, the initial phase of a study to determine the dominant aqueous phases that control the transport of plutonium (Pu), americium (Am), and uranium (U) in surface and groundwater at the Rocky Flats Plant was undertaken by the U.S. Geological Survey. By use of the techniques of stirred-cell spiral-flow filtration and crossflow ultrafiltration, particles of three size fractions were collected from a 60-liter sample of water from well 1587 at the Rocky Flats Plant. These samples and corresponding filtrate samples were analyzed for Pu and Am. As calculated from the analysis of filtrates, 65 percent of Pu 239 and 240 activity in the sample was associated with particulate and largest colloidal size fractions. Particulate (22 percent) and colloidal (43 percent) fractions were determined to have significant activities in relation to whole-water Pu activity. Am and Pu 238 activities were too low to be analyzed. Examination and analyses of the particulate and colloidal phases indicated the presence of mineral species (iron oxyhydroxides and clay minerals) and natural organic matter that can facilitate the transport of actinides in ground water. High concentrations of the transition metals copper and zinc in the smallest colloid fractions strongly indicate a potential for organic complexation of metals, and potentially of actinides, in this size fraction.

Colorado↗

Fort Collins Science Center: Ecosystem Dynamics

Many challenging natural resource management issues require consideration of a web of interactions among ecosystem components. The spatial and temporal complexity of these ecosystem problems demands an interdisciplinary approach integrating biotic and abiotic processes. The goals of the Ecosystem Dynamics Branch are to provide sound science to aid federal resource managers and use long-term, place-focused research and monitoring on federal lands to advance ecosystem science. Current studies fall into five general areas. Herbivore-Ecosystem Interactions examines the efficacy of multiple controls on selected herbivore populations and cascading effects through predator-herbivore-plant-soil linkages. Riparian Ecology is concerned with interactions among streamflow, fluvial geomorphology, and riparian vegetation. Integrated Fire Science focuses on the effects of fire on plant and animal communities at multiple scales, and on the interactions between post-fire plant, runoff, and erosion processes. Reference Ecosystems comprises long-term, place-based studies of ecosystem biogeochemistry. Finally, Integrated Assessments is investigating how to synthesize multiple ecosystem stressors and responses over complex landscapes in ways that are useful for management and planning.

Fact Sheet↗

Analysis of trends in terrestrial vegetation at Mediterranean Coast Network Parks: Channel Islands National Park

The five islands comprising Channel Islands National Park (CHIS) experience natural gradients in temperature and moisture driven by ocean currents. Additionally, the islands were used as ranchlands and military land before becoming a national park, resulting in widespread erosion and vegetation change. As a result, CHIS spans gradients in climate as well as ranching duration and time since animal removal. Vegetation monitoring was initiated in 1984 on three islands (Anacapa, Santa Barbara, San Miguel), in 1990 on Santa Rosa Island, and in 1998 on Santa Cruz Island, with the goal of documenting the long-term response of island vegetation to ranch animal removal and climate fluctuations. Since that time, monitoring has documented the range of natural fluctuation in island environments over decades and provided insights into vegetation change in ecosystems unencumbered by ongoing development. Long-term vegetation monitoring at CHIS is therefore a rare example of an ecosystem experiment that demonstrates the results of management actions and serves as a baseline for land managers and scientists worldwide. Terrestrial vegetation data collected between 1984 and 2018 were modeled to estimate trends over time and to characterize relationships with covariates related to site characteristics, nonnative mammal removal programs, and water balance metrics. Data were analyzed for trends in vegetation cover, woody plant density, and plant community diversity grouped by life form and nativity across all islands and within individual islands, as well as for several individual species that dominate plant communities or present challenges to native plant recovery. In all, a total of 162 trend and covariate models were tested in this study, the details of which are provided in this report. Briefly, results reflect a decline in nonnative annual disturbance-thriving species with the reduction in animal grazing and trampling. Increasing trends were observed in native shrub density and native shrub recruitment density, as well as native shrub cover across all islands averaged together and on Santa Cruz Island. However, opposite trends were seen on the smaller islands of Santa Barbara and Anacapa, where increasing seabird activity may be damaging vegetation. Further results indicate the importance of soil moisture, relative humidity, fog, precipitation, site exposure, and solar radiation for vegetation patterns and trends. In many instances, there are apparent interacting effects of environmental variables with trends related to nonnative mammal removal and site location. Vegetation patterns in space and time emerge in the dataset as nuanced responses to interacting drivers.

Calfornia↗

Vegetation of natural and artificial shorelines in Upper Klamath Basin’s fringe wetlands

The Upper Klamath Basin (UKB) in northern California and southern Oregon supports large hypereutrophic lakes surrounded by natural and artificial shorelines. Lake shorelines contain fringe wetlands that provide key ecological services to the people of this region. These wetlands also provide a context for drawing inferences about how differing wetland types and wave exposure contribute to the vegetative assemblages in lake-fringe wetlands. Here, we summarize how elevation profiles and vegetation richness vary as a function of wave exposure and wetland type. Our results show that levee wetland shorelines are 4X steeper and support fewer species than other wetland types. We also summarize the occurrence probability of the five common wetland plant species that represent the overwhelming majority of the diversity of these wetlands. In brief, the occurrence probability of the culturally significant Nuphar lutea spp. polysepala and the invasive Phalaris arundinacea in wave exposed and sheltered sites varies based on wetland type. The occurrence probability for P. arundinacea was greatest in exposed portions of deltaic shorelines, but these trends were reversed on levees where the occurrence probability was greater in sheltered sites. The widespread Schoenoplectus acutus var. acutus occurred throughout all wetland and exposure type combinations but had a higher probability of occurrence in wave exposed sites. Results from this work will add to our current understanding of how wetland shoreline profiles interact with wave exposure to influence the occurrence probability of the dominant vegetative species in UKB’s shoreline wetlands.

Wetland Science & Practice↗

Prior knowledge-based approach for associating contaminants with biological effects: A case study in the St. Croix River basin, MN, WI, USA

Evaluating potential adverse effects of complex chemical mixtures in the environment is challenging. One way to address that challenge is through more integrated analysis of chemical monitoring and biological effects data. In the present study, water samples from five locations near two municipal wastewater treatment plants in the St. Croix River basin, on the border of MN and WI, USA, were analyzed for 127 organic contaminants. Known chemical-gene interactions were used to develop site-specific knowledge assembly models (KAMs) and formulate hypotheses concerning possible biological effects associated with chemicals detected in water samples from each location. Additionally, hepatic gene expression data were collected for fathead minnows ( Pimephales promelas ) exposed in situ , for 12 d, at each location. Expression data from oligonucleotide microarrays were analyzed to identify functional annotation terms enriched among the differentially-expressed probes. The general nature of many of the terms made hypothesis formulation on the basis of the transcriptome-level response alone difficult. However, integrated analysis of the transcriptome data in the context of the site-specific KAMs allowed for evaluation of the likelihood of specific chemicals contributing to observed biological responses. Thirteen chemicals (atrazine, carbamazepine, metformin, thiabendazole, diazepam, cholesterol, p-cresol, phenytoin, omeprazole, ethyromycin, 17β-estradiol, cimetidine, and estrone), for which there was statistically significant concordance between occurrence at a site and expected biological response as represented in the KAM, were identified. While not definitive, the approach provides a line of evidence for evaluating potential cause-effect relationships between components of a complex mixture of contaminants and biological effects data, which can inform subsequent monitoring and investigation.

Minnesota, Wisconsin↗

Watershed-scale risk to aquatic organisms from complex chemical mixtures in the Shenandoah River

River waters contain complex chemical mixtures derived from natural and anthropogenic sources. Aquatic organisms are exposed to the entire chemical composition of the water, resulting in potential effects at the organismal through ecosystem level. This study applied a holistic approach to assess landscape, hydrological, chemical, and biological variables. On-site mobile laboratory experiments were conducted to evaluate biological effects of exposure to chemical mixtures in the Shenandoah River Watershed. A suite of 534 inorganic and organic constituents were analyzed, of which 273 were detected. A watershed-scale accumulated wastewater model was developed to predict environmental concentrations of chemicals derived from wastewater treatment plants (WWTPs) to assess potential aquatic organism exposure for all stream reaches in the watershed. Measured and modeled concentrations generally were within a factor of 2. Ecotoxicological effects from exposure to individual components of the chemical mixture were evaluated using risk quotients (RQs) based on measured or predicted environmental concentrations and no effect concentrations or chronic toxicity threshold values. Seventy-two percent of the compounds had RQ values <0.1, indicating limited risk from individual chemicals. However, when individual RQs were aggregated into a risk index, most stream reaches receiving WWTP effluent posed potential risk to aquatic organisms from exposure to complex chemical mixtures.

Virginia↗

Kansas and Landsat

Kansas seems synonymous with agriculture, and rightly so—87 percent of Kansas land is devoted to it. As a key contributor to the State’s economy, agriculture makes Kansas one of the top producers of wheat, grain sorghum, and cattle in the country, but the State at the geographic center of the conterminous United States contains much more than fields and pastures. Deciduous woodlands sprawl throughout the east. Tallgrass prairie—the only extensive stand remaining in the country—covers the east-central Flint Hills with more than 500 species of plants, many of them wildflowers, including the Sunflower State’s nickname inspiration. Near the center of Kansas, Cheyenne Bottoms—the largest marsh in the interior United States at 41,000 acres—welcomes migrating birds, including the endangered Grus americana (Linnaeus, 1758; whooping crane), by the thousands in the spring and fall. To the south, the inland saltwater marshes of Quivira National Wildlife Refuge attract many more. Farther west, chalk outcroppings like Castle Rock and Monument Rocks rise above the landscape as fossil-bearing remnants of a sea floor from millions of years ago. Oil and natural gas fields exist throughout the State. After two University of Kansas professors discovered helium in a sample from one natural gas well in 1905, Kansas became a substantial supplier. The Landsat Program provides tools for monitoring and managing our conservation lands and their many resources. Here are several ways Landsat helps Kansas.

Kansas↗

Salinity in the Colorado River in the Grand Valley, western Colorado, 1994-95

Salinity, or the dissolved-solids concentration, is the measure of salts such as sodium chloride, calcium bicarbonate, and calcium sulfate that are dissolved in water. About one-half of the salinity in the Colorado River Basin is from natural sources (U.S. Department of the Interior, 1995), such as thermal springs in the Glenwood-Dotsero area, located about 90 miles upstream from Grand Junction (fig. 1). Effects of human activities, such as irrigation, reservoir evaporation, and transbasin diversions, have increased the levels of salinity in the Colorado River. High salinity can affect industrial and municipal water users by causing increased water-treatment costs, increased deterioration of plumbing and appliances, increased soap needs, and undesirable taste of drinking water. High salinity also can cause lower crop yields by reducing water and nutrient uptake by plants and can increase agricultural production costs because of higher leaching and drainage requirements. Agricultural losses might occur when salinity reaches about 700?850 milligrams per liter (U.S Department of the Interior, 1994). Figure 1. Irrigated area in the Grand Valley and locations of sampling sites for the 1994?95 salinity study of the Colorado River. The Colorado River is the major source of irrigation water to the Grand Valley (fig. 1) and also is one source of water for the Clifton Water District, which supplies domestic water to part of the eastern Grand Valley. During spring and early summer in 1994, the Colorado River in the Grand Valley had lower than average streamflow. There was concern by water users about the effect of this low streamflow on salinity in the river. In 1994, the U.S. Geological Survey (USGS), in cooperation with the Colorado River Water Conservation District, began a study to evaluate salinity in the Colorado River. This fact sheet describes results of that study. The specific objectives of the fact sheet are to (1) compare salinity in the Colorado River among different locations from Cameo to the Colorado-Utah State line, (2) assess variations in salinity for different times of the year, and (3) describe the relation between streamflow and salinity in the river.

Colorado↗

Hydrogeologic framework, water levels, and selected contaminant concentrations at Valmont TCE Superfund Site, Luzerne County, Pennsylvania, 2020

The Valmont TCE Superfund Site, Luzerne County, Pennsylvania is underlain by fractured and folded sandstones and shales of the Pottsville and Mauch Chunk Formations, which form a fractured-rock aquifer recharged locally by precipitation. Industrial activities at the former Chromatex Plant resulted in trichloroethene (TCE) contamination of groundwater at and near the facility, which was identified in 1987 and led to listing as a Superfund site by the U.S. Environmental Protection Agency (EPA) in 1989. To address the problem of TCE concentrations in nearby residential wells that exceed the maximum contaminant level (MCL) of 5 micrograms per liter (μg/L), alternate water supplies were provided. A 2015 review of initial characterization and subsequent remediation by the EPA identified the need for an updated understanding of the complex hydrogeology and the conceptual site model. Additional contaminants present in groundwater at the site include some other volatile organic compounds (VOCs) and per- and polyfluoroalkyl substances (PFAS), predominantly consisting of perfluorooctanoic acid (PFOA) and perfluorooctanesulfonic acid (PFOS) present in concentrations that exceeded the EPA Health Advisory (HA) level of 5 nanograms per liter (ng/L) for combined PFOA and PFOS. In response to a request from the EPA in 2019, the U.S. Geological Survey (USGS) prepared cross sections and maps to provide more information about the hydrogeologic framework at and near the site and assist in improving the conceptual site model using water level and contaminant data collected by the EPA in 2020. The cross sections present lithologic correlations from available geophysical logs collected in wells from 2002 to 2014; they show alternating intervals of relatively elevated and reduced natural gamma activity that correspond to changes in lithology, with water-bearing zones and well screens commonly located at lithologic contacts, sometimes near thin coal seams. Water-bearing zones commonly are associated with fractures at or near lithologic contacts but also may be associated with fractures at or near apparent faulting. Recent (March 2020) water-level data shown on cross sections and maps indicate large downward vertical gradients and apparent radial gradients laterally to the northeast, northwest, and southwest that generally following topography. Recent (February to March 2020) data for TCE groundwater concentration shown on cross sections and maps indicate the highest TCE concentrations (greater than 3,000 μg/L and as much as 75,000 μg/L) and combined PFOA and PFOS concentrations (greater than 1,000 ng/L and up to at least 2,350 ng/L) are from shallow (less than 60 feet [ft] below land surface [bls]) and intermediate depth (60 to 100 ft bls) wells near the center of the former Chromatex Plant. TCE and PFAS (as combined PFOA and PFOS) contamination is present at greater depths, as much as 304 ft bls, as evidenced by samples collected from one well (a reconstructed former production well) near the plant, that contained concentrations of about 240 μg/L and 508 ng/L, respectively. The 2020 data also indicate that TCE and PFAS concentrations which exceed drinking-water MCL or HA levels are present in groundwater depths of less than 200 ft in an area that extends predominantly in a northeast direction from the former Chromatex Plant, and is apparently influenced by hydraulic gradients, lithology, and geologic structure.

Pennsylvania↗

Surface-water-quality assessment of the Yakima River basin in Washington: major-and minor-element data for sediment, water, and aquatic biota, 1987-91

Major- and minor-element concentrations are presented for streambed and suspended sediment, filtered- and unfiltered-water, and aquatic-biota samples collected during 1987-91 from the Yakima River Basin in south-central Washington. The samples were collected as part of the U.S. Geological Survey's National Water-quality Assessment (NAWQA) program which is designed to provide results that are useful in understanding and managing the Nation's water resources. This report includes the sampling approach, field collection and processing techniques, and methods of chemical analysis, as well as a compilation of chemical data, statistical summaries, and quality- control data. These data may be used by scientists and resource managers to describe (1) spatial distribution of selected major and minor elements in sediment, water, and aquatic biota of the Yakima River Basin; (2) temporal variation for element concentrations in filtered water and in suspended sediment at selected sites; (3) suita- bility of surface water for preservation of aquatic life and protection of human health; and (4) major natural and anthropogenic sources of major and minor elements in the Yakima River Basin that affect observed water-quality conditions. Streambed-sediment samples were collected once from 27 sites in the basin during 1987-91. Suspended-sediment and filtered-water samples were collected monthly and during hydrologic events (including snowmelt and winter rainstorms) at seven sites, and filtered-water samples were collected at least once at an additional 37 sites during synoptic samplings. Unfiltered-water samples were collected at seven sites on a quarterly basis during 1987 only. Samples of aquatic plants were collected once in 1989, and aquatic insects, fish, and clams were collected from 34 sites three times during 1989-90.

Washington↗