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At least 1,099 records · Page 61Linked to original sources

USGS2022

Statewide quantitative microbial risk assessment for waterborne viruses, bacteria, and protozoa in public water supply wells in Minnesota

Infection risk from waterborne pathogens can be estimated via quantitative microbial risk assessment (QMRA) and forms an important consideration in the management of public groundwater systems. However, few groundwater QMRAs use site-specific hazard identification and exposure assessment, so prevailing risks in these systems remain poorly defined. We estimated the infection risk for 9 waterborne pathogens based on a 2-year pathogen occurrence study in which 964 water samples were collected from 145 public wells throughout Minnesota, USA. Annual risk across all nine pathogens combined was 3.3 × 10 –1 (95% CI: 2.3 × 10 –1 to 4.2 × 10 –1 ), 3.9 × 10 –2 (2.3 × 10 –2 to 5.4 × 10 –2 ), and 1.2 × 10 –1 (2.6 × 10 –2 to 2.7 × 10 –1 ) infections person –1 year –1 for noncommunity, nondisinfecting community, and disinfecting community wells, respectively. Risk estimates exceeded the U.S. benchmark of 10 –4 infections person –1 year –1 in 59% of well-years, indicating that the risk was widespread. While the annual risk for all pathogens combined was relatively high, the average daily doses for individual pathogens were low, indicating that significant risk results from sporadic pathogen exposure. Cryptosporidium dominated annual risk, so improved identification of wells susceptible to Cryptosporidium contamination may be important for risk mitigation.

Minnesota↗

USGS1996

Physiological considerations in applying laboratory-determined buoyant densities to predictions of bacterial and protozoan transport in groundwater: Results of in-situ and laboratory tests

Buoyant densities were determined for groundwater bacteria and microflagellates (protozoa) from a sandy aquifer (Cape Cod, MA) using two methods: (1) density-gradient centrifugation (DGC) and (2) Stoke's law approximations using sedimentation rates observed during natural-gradient injection and recovery tests. The dwarf (average cell size, 0.3 μm), unattached bacteria inhabiting a pristine zone just beneath the water table and a majority (∼80%) of the morphologically diverse community of free-living bacteria inhabiting a 5-km-long plume of organically-contaminated groundwater had DGC-determined buoyant densities <1.019 g/cm 3 before culturing. In the aquifer, sinking rates for the uncultured 2-μm size class of contaminant plume bacteria were comparable to that of the bromide tracer (1.9 × 10 - 3 M), also suggesting a low buoyant density. Culturing groundwater bacteria resulted in larger (0.8−1.3 μm), less neutrally-buoyant (1.043−1.081 g/cm 3 ) cells with potential sedimentation rates up to 64-fold higher than those predicted for the uncultured populations. Although sedimentation generally could be neglected in predicting subsurface transport for the community of free-living groundwater bacteria, it appeared to be important for the cultured isolates, at least until they readapt to aquifer conditions. Culturing-induced alterations in size of the contaminant-plume microflagellates (2−3 μm) were ameliorated by using a lower nutrient, acidic (pH 5) porous growth medium. Buoyant densities of the cultured microflagellates were low, i.e., 1.024−1.034 g/cm 3 (using the DGC assay) and 1.017−1.039 g/cm 3 (estimated from in-situ sedimentation rates), sug gesting good potential for subsurface transport under favorable conditions.

Environmental Science & Technology↗

USGS1987

Dinosaurs on the North Slope, Alaska: High latitude, latest cretaceous environments

Abundant skeletal remains demonstrate that lambeosaurine hadrosaurid, tyrannosaurid, and troodontid dinosaurs lived on the Alaskan North Slope during late Campanian—early Maestrichtian time (about 66 to 76 million years ago) in a deltaic environment dominated by herbaceous vegetation. The high ground terrestrial plant community was a mild- to cold-temperate forest composed of coniferous and broad leaf trees. The high paleolatitude (about 70° to 85° North) implies extreme seasonal variation in solar insolation, temperature, and herbivore food supply. Great distances of migration to contemporaneous evergreen floras and the presence of both juvenile and adult hadrosaurs suggest that they remained at high latitudes year-round. This challenges the hypothesis that short-term periods of darkness and temperature decrease resulting from a bolide impact caused dinosaurian extinction.

Alaska↗

USGS2016

Misapplied survey data and model uncertainty result in incorrect conclusions about the role of predation on alewife population dynamics in Lake Huron: a comment on He et al. (2015)

Drastic recent and ongoing changes to fish populations and food webs in the Great Lakes have been well-described ( Riley et al. 2008 ; Barbiero et al. 2009 ; Nalepa et al. 2009 ; Fahnenstiel et al. 2010 ; Evans et al. 2011 ; Gobin et al. 2015 ), and uncertainty regarding their potential effects on fisheries has caused concern among scientists and fishery managers (e.g., Dettmers et al. 2012 ). In particular, the relative importance of “bottom-up” (e.g., lower trophic level changes) versus “top-down” (e.g., predation) factors to fish community changes in the Great Lakes have been widely debated (e.g., Barbiero et al. 2011 ; Eshenroder and Lantry 2012 ; Bunnell et al. 2014 ). In Lake Huron, recent ecosystem changes have been particularly profound, and populations of alewife ( Alosa pseudoharengus ), an offshore pelagic prey fish, collapsed in 2003 and have yet to recover ( Riley et al. 2008 , 2014 ). He et al. (2015) recently used a series of linked ecological models to assess the role of predation in the dynamics of the offshore prey fish community in Lake Huron. While we believe that they provide a novel method for combining bioenergetics and stock assessment modeling, we question the validity of their conclusions because of the misapplication of survey data and the lack of critical interpretation of their modeling efforts. Here we describe how He et al. (2015) have misapplied bottom trawl data from Lake Huron, and we provide examples of how this has resulted in erroneous conclusions regarding the importance of predation to the population dynamics and collapse of alewife in Lake Huron.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2022

Inventory of eelgrass (Zostera marina) and seaweeds at the end of the Alaska Peninsula, August–September 2012:

Coastal communities in Alaska are undergoing rapid environmental change from increasing temperatures and baseline data are needed to monitor potential impacts. We conducted the first surveys of the abundance and distribution of eelgrass ( Zostera marina ) and seaweeds in the western part of Izembek National Wildlife Refuge at the end of the Alaska Peninsula. Six embayments and two offshore islands were surveyed in August–September of 2012. Biotic (percent cover of eelgrass/seaweeds, presence/absences of five sessile invertebrates), and abiotic (water temperature, salinity, and depth) data were recorded at 257 survey points (range =9–74 points per site) across all sites. Twenty-two genera/species of seaweeds were identified at the six embayments. New seaweed species for the offshore islands of Sanak and Caton were added to an existing seaweed collection accessioned at the University of British Columbia Herbarium. We also collected samples of eelgrass to be accessioned at U.S. Geological Survey, Alaska Science Center-Molecular Ecology Laboratory, for future genetic analyses. Fifty-three species of birds and 13 species of mammals were observed and recorded during the survey period.

Alaska↗

USGS2025

Practical pathways for protecting headwater streams in urbanizing areas

Headwater streams are diverse ecosystems and important sources of water and dissolved and particulate resources to the downstream river network. However, across the world, they are rapidly being degraded or lost through human activities, particularly urban development. This degradation and loss have negative consequences for the structure and function of headwater streams, as well as downstream river networks. Despite long-held recognition of the ecological value of headwater streams and the impacts of their widespread loss, there remains a large gap between developing strategies and tangible action. To address this gap, we, a group of cross-disciplinary researchers and practitioners from multiple organizations and locations, developed a framework to guide strategic decision-making and a comprehensive set of structural and nonstructural tools that can be used to protect headwater streams in urbanizing areas where opportunities to protect waterway health are being considered by local waterway practitioners and the community. The framework was tested by applying it to 4 contrasting case studies of urbanization with different physiographic, policy, and legislative settings. Our evaluation showed that the framework provides a useful generic mechanism that can be used by policymakers, planners, and other stakeholders to diagnose the status of headwater stream protection in a variety of urban areas and to support structured stakeholder conversations about what is desirable, practical, and achievable for their context.

Freshwater Science↗

USGS1998

Nonindigenous Ants at High Elevations on Mauna Kea, Hawai'i

Ant surveys were conducted at high elevations (1680-3140 m) on the western slope of Mauna Kea Volcano on the island of Hawai'i to detennine the extent of ant infestation in those highland communities and particularly to evaluate the potential threat of ants in the highlands to native Hawaiian species. Ants were surveyed at 10 long-tenn sampling sites. Ants were common on Mauna Kea up to 2000 m elevation, but densities quickly dropped off above that. Five species of ants were collected: Linepithema humile (Mayr), Cardiocondyla venustula Wheeler, Pheidole megacephala (Fabricius), Tetramorium bicarinatum (Nylander), and Monomorium pharaonis (Linnaeus). Other than L. humile , these collections on Mauna Kea are the highest recorded locales in the Hawaiian Islands.

Hawaii↗

USGS2022

Early career researchers have questions about peer review—we asked the ASLO editors for answers

Peer review is the formal means by which the scientific community assesses the originality, reproducibility, validity, and quality of a research study (Bakker and Traniello 2019). As such, peer review assures nonexperts that they can trust a study's findings (Jamieson et al. 2019). Despite the critical importance of peer review, graduate students, postdocs, and other early career researchers (ECRs) have limited resources for learning about this process (but see Nicholas and Gordon 2011 and Nature Communications 2021). A recent survey found that most reviewers have not received formal training on peer review and that reviewers of all career stages (77%), especially ECRs (89%), desire further training (Warne 2016). This reflects a need for guidance regarding when and how to engage in peer review, best practices for conducting a peer review, and how editors weigh peer reviews in their editorial decisions. In an effort to help new reviewers navigate this process, we (the Raelyn Cole Editorial Fellows) hosted an Association for the Sciences of Limnology and Oceanography (ASLO) webinar on peer review in September of 2021 (recording available: https://www.youtube.com/watch?v=utntl1VGy5g). The webinar had 329 registrants, including 198 students or postdocs, underscoring the desire for peer review resources. The webinar content was largely based on a survey of the associate editors (AEs) of ASLO's three peer-reviewed journals ( n = 25 respondents), consisting of five open-ended questions about peer review. Here, we use insights from our survey and webinar to describe how ECRs can join the reviewer pool, provide guidance for writing a useful and time-efficient review, and discuss challenges and opportunities in the evolving landscape of peer review.

Limnology and Oceanography Letters↗

USGS2003

A comparison of bat activity at low and high elevations in the Black Hills of western Washington

We examined the differences in activity patterns and community structure of bats between low (<150 m) and high ( ! 575 m) elevation sites in two habitats of the Capitol State Forest, Washington. Total bat activity averaged four times higher at low elevation sites than at high elevation sites. Feeding activity was almost 20 times higher at low elevation sites. However, the non-myotis group had similar activity levels at high and low elevation, whereas myotis group activity decreased at higher elevations. Different levels of activity between elevations could be the result of differences in insect availability, climatic conditions, and morphology of the bat species.

Northwest Science↗

USGS2025

Potential risks of vegetation treatments to introduce and increase invasive annual grasses in rangelands of Montana, North Dakota, and South Dakota— A science synthesis to inform National Environmental Policy Act analyses

The U.S. Geological Survey is working with Federal land management agencies to develop a series of planned structured science syntheses to support environmental effects analyses that agencies conduct under the National Environmental Policy Act (NEPA). This report synthesizes science information relevant to environmental effects analyses concerned with potential increases in the distribution and abundance of invasive annual grasses (IAGs) from proposed vegetation treatments for habitat restoration. The focal environments for this synthesis are rangelands in the intermontane valleys of Montana and the northern Great Plains of Montana, North Dakota, and South Dakota. The synthesis is organized to align with the standard elements of NEPA analyses and provides information on relevant scientific studies, data availability, analysis methods, and mitigation measures. We found that the likelihood of increasing IAGs from vegetation treatments depends on treatment type and environmental context. In sagebrush ecosystems of the focal region, prescribed fire often reduces or does not increase IAGs. Treatments that cause soil disturbances, such as mechanical removals of sagebrush or firebreak constructions, are more likely to increase IAGs than other treatments. Herbicides applied to reduce sagebrush cover have not increased the proportion of IAGs in the plant community. Temperature and precipitation have been strong factors in determining IAG responses to vegetation treatments in sagebrush ecosystems of the focal region, where more precipitation in spring and summer likely provides a competitive edge to native, perennial grasses more than winter annual grasses like Bromus tectorum L. (cheatgrass). In grasslands, prescribed fire often reduces IAGs, but effects depend on the abundance of native species and are often short lived. Mowing can increase or decrease IAGs in grassland ecosystems. Grassland site conditions, such as southeast-facing slopes, sandier or rockier sites, or lower native species cover or richness affect the likelihood of invasion by annual grasses. Maintaining adequate cover of perennial vegetation creates rangelands that are resistant and resilient to annual grass invasions. Managers can minimize invasion potential by focusing on treatment type, placement, and seasonal timing. Herbicides also can provide effective mitigation, especially in combination with other controls such as prescribed fire or grazing. This report can be incorporated by reference in NEPA documentation, included in a project record, or provide a general reference for understanding and identifying literature about increases in IAGs associated with vegetation treatments in rangelands in this focal region.

Montana, North Dakota, South Dakota↗

USGS2007

Results of a Wildlife Toxicology Workshop held by the Smithsonian Institution ? Identification and prioritization of problem statements

On March 13-15, 2007 nearly 50 scientists and administrators from the US and Canada participated in a Smithsonian-sponsored Wildlife Toxicology Workshop. Invitees were from academic, government, conservation and the private organizations and were selected to represent the diverse disciplines that encompass wildlife toxicology. The workshop addressed scientific and policy issues, strengths and weaknesses of current research strategies, interdisciplinary and science-based approaches in the study of complex contaminant issues, mechanisms for disseminating data to policy-makers, and the development of a partner network to meet the challenges facing wildlife toxicology over the next decade. Prior to the meeting, participants were asked to submit issues they deemed to be of highest concern which shaped four thematic groups for discussion: Wildlife Toxicology in Education, Risk Assessment, Multiple Stressors/Complex Mixtures, and Sub-Lethal to Population-Level Effects. From these discussion groups, 18 problem statements were developed and prioritized outlining what were deemed the most important issues to address now and into the future. Along with each problem statement participants developed potential solutions and action steps geared to move each issue forward. The workshop served as a stepping stone for action in the field of wildlife toxicology. These problem statements and the resulting action items are presented to the inter-disciplinary wildlife toxicology community for adoption, and future work and action items in these areas are encouraged. The workshop outcome looks to generate conversation and collaboration that will lead to the development of innovative research, future mechanisms for funding, workshops, working groups, and listserves within the wildlife toxicology community.

Book chapter↗

USGS2018

Bioactive contaminants of emerging concern in National Park waters of the northern Colorado Plateau, USA

Pharmaceuticals and personal care products (PPCPs), wastewater indicators (WWIs), and pesticides (herein, Contaminants of Emerging Concern [CECs]) have been documented in surface waters throughout the world and have associated risks to aquatic life. While much research has focused on temperate and urbanized watersheds, less is known about CEC presence in semi-arid landscapes, where water availability is limited and populations are low. CEC presence in water and sediment is reported for 21 sites in eight U.S. national parks in the northern Colorado Plateau region. From 2012 to 2016, at least one PPCP and/or WWI was detected at most sites on over half of sampling visits, indicating that CECs are not uncommon even in isolated areas. CEC detections were generally fewer and at lower concentrations than in urbanized or agricultural watersheds. Consistent with studies from other U.S. regions, the most frequently detected CECs in this study include DEET, caffeine, organophosphorus flame retardants, and bisphenol A in water and fecal indicators and polycyclic aromatic hydrocarbons in sediment. Maximum concentrations in this study were generally below available water quality benchmarks, sediment quality guidelines, and risk assessment thresholds associated with vertebrates. Additional work is needed to assess the potential activity of hormones, which had high reporting limits in our study, and potential bioactivity of environmental concentrations for invertebrates, microbial communities, and algae. Potential sources of CEC contamination include upstream wastewater effluent discharges and National Park Service invasive-plant-control herbicide applications. CEC occurrence patterns and similarities between continuous and isolated flow locations suggest that direct contamination from individual visitors may also occur. While our data indicate there is little aquatic health risk associated with CECs at our sites, our results demonstrate the ubiquity of CECs on the landscape and a continued need for public outreach concerning resource-use ethics and the potential effects of upstream development.

Colorado Plateau↗

USGS2023

Nitrate-stimulated release of naturally occurring sedimentary uranium

Groundwater uranium (U) concentrations have been measured above the U.S. EPA maximum contaminant level (30 μg/L) in many U.S. aquifers, including in areas not associated with anthropogenic contamination by milling or mining. In addition to carbonate, nitrate has been correlated to uranium groundwater concentrations in two major U.S. aquifers. However, to date, direct evidence that nitrate mobilizes naturally occurring U from aquifer sediments has not been presented. Here, we demonstrate that the influx of high-nitrate porewater through High Plains alluvial aquifer silt sediments bearing naturally occurring U(IV) can stimulate a nitrate-reducing microbial community capable of catalyzing the oxidation and mobilization of U into the porewater. Microbial reduction of nitrate yielded nitrite, a reactive intermediate, which was further demonstrated to abiotically mobilize U from the reduced alluvial aquifer sediments. These results indicate that microbial activity, specifically nitrate reduction to nitrite, is one mechanism driving U mobilization from aquifer sediments in addition to previously described bicarbonate-driven desorption from mineral surfaces, such as Fe(III) oxides.

Nebraska↗

USGS2006

Land Area Changes in Coastal Louisiana After the 2005 Hurricanes: A Series of Three Maps

This report includes three posters with analyses of net land area changes in coastal Louisiana after the 2005 hurricanes (Katrina and Rita). The first poster presents a basic analysis of net changes from 2004 to 2005; the second presents net changes within marsh communities from 2004 to 2005; and the third presents net changes from 2004 to 2005 within the historical perspective of change in coastal Louisiana from 1956 to 2004. The purpose of this analysis was to provide preliminary information on land area changes shortly after Hurricanes Katrina and Rita and to serve as a regional baseline for monitoring wetland recovery following the 2005 hurricane season. Estimation of permanent losses cannot be made until several growing seasons have passed and the transitory impacts of the hurricanes are minimized, but this preliminary analysis indicates an approximate 217-mi2 (562.03-km2) decrease in land/increase in water across coastal Louisiana. These posters are presented in high-resolution PDF format that is not Section 508 compliant. For ease in accessibility, viewing, and printing, each poster is accompanied by PDF files that contain the corresponding methodology, tables, and figures. Funding for this project was provided by the Louisiana Coastal Area (LCA) Science & Technology Office.

Open-File Report↗

USGS2022

Unified methods in collecting, preserving, and archiving coral bleaching and restoration specimens to increase sample utility and interdisciplinary collaboration

Coral reefs are declining worldwide primarily because of bleaching and subsequent mortality resulting from thermal stress. Currently, extensive efforts to engage in more holistic research and restoration endeavors have considerably expanded the techniques applied to examine coral samples. Despite such advances, coral bleaching and restoration studies are often conducted within a specific disciplinary focus, where specimens are collected, preserved, and archived in ways that are not always conducive to further downstream analyses by specialists in other disciplines. This approach may prevent the full utilization of unexpended specimens, leading to siloed research, duplicative efforts, unnecessary loss of additional corals to research endeavors, and overall increased costs. A recent US National Science Foundation-sponsored workshop set out to consolidate our collective knowledge across the disciplines of Omics, Physiology, and Microscopy and Imaging regarding the methods used for coral sample collection, preservation, and archiving. Here, we highlight knowledge gaps and propose some simple steps for collecting, preserving, and archiving coral-bleaching specimens that can increase the impact of individual coral bleaching and restoration studies, as well as foster additional analyses and future discoveries through collaboration. Rapid freezing of samples in liquid nitrogen or placing at −80 °C to −20 °C is optimal for most Omics and Physiology studies with a few exceptions; however, freezing samples removes the potential for many Microscopy and Imaging-based analyses due to the alteration of tissue integrity during freezing. For Microscopy and Imaging, samples are best stored in aldehydes. The use of sterile gloves and receptacles during collection supports the downstream analysis of host-associated bacterial and viral communities which are particularly germane to disease and restoration efforts. Across all disciplines, the use of aseptic techniques during collection, preservation, and archiving maximizes the research potential of coral specimens and allows for the greatest number of possible downstream analyses.

PeerJ↗

USGS2005

Stream invertebrate community functional responses to deposited sediment

We investigated functional responses of benthic invertebrates to deposited sediment in four Missouri USA streams. In each stream, invertebrates were sampled along continuums of deposited sediment (particles <2 mm in size) from 0 to 100% surface cover in reaches of fairly homogeneous substrate composition, current velocity, and water depths. Correlations, graphical representations, and the cumulative response curves of feeding and habit groups provided strong empirical support for distinct community functional changes due to deposited sediment. Feeding groups were more sensitive to deposited sediment than habit groups. Densities of all the feeding groups decreased significantly with increasing deposited sediment, while relative densities of gatherers increased significantly. Taxa richness also decreased significantly for all the feeding groups except for the shredders. Increases in deposited sediment were related to significant density decreases for only the clingers and sprawlers in the habit group, resulting in significant increases in the relative densities of both burrowers and climbers. Clingers, sprawlers, and swimmers also showed significant decreases in taxa richness. ?? Eawag, 2005.

Aquatic Sciences↗

USGS2021

Modes of climate variability bridge proximate and evolutionary mechanisms of masting

There is evidence that variable and synchronous reproduction in seed plants (masting) correlates to modes of climate variability, e.g. El Niño Southern Oscillation and North Atlantic Oscillation. In this perspective, we explore the breadth of knowledge on how climate modes control reproduction in major masting species throughout Earth's biomes. We posit that intrinsic properties of climate modes (periodicity, persistence and trends) drive interannual and decadal variability of plant reproduction, as well as the spatial extent of its synchrony, aligning multiple proximate causes of masting through space and time. Moreover, climate modes force lagged but in-phase ecological processes that interact synergistically with multiple stages of plant reproductive cycles. This sets up adaptive benefits by increasing offspring fitness through either economies of scale or environmental prediction. Community-wide links between climate modes and masting across plant taxa suggest an evolutionary role of climate variability. We argue that climate modes may ‘bridge’ proximate and ultimate causes of masting selecting for variable and synchronous reproduction. The future of such interaction is uncertain: processes that improve reproductive fitness may remain coupled with climate modes even under changing climates, but chances are that abrupt global warming will affect Earth's climate modes so rapidly as to alter ecological and evolutionary links.

Philosophical Transactions of the Royal Society B:↗

USGS2019

Spatial and temporal variation in river corridor exchange across a 5th order mountain stream network

Although most field and modeling studies of river corridor exchange have been conducted a scales ranging from 10’s to 100’s of meters; results of these studies are used to predict their ecological and hydrological influences at the scale of river networks. Further complicating prediction, exchanges are expected to vary with hydrologic forcing and the local geomorphic setting. While we desire predictive power, we lack a complete spatiotemporal relationship relating discharge to the variation in geologic setting and hydrologic forcing that are expected across a river basin. Indeed, Wondzell’s (2011) conceptual model predicts systematic variation in river corridor exchange as a function of (1) variation in baseflow over time at a fixed location, (2) variation in discharge with location in the river network, and (3) local geomorphic setting. To test this conceptual model we conducted more than 60 solute tracer studies including a synoptic campaign in the 5th order river network of the H.J. Andrews Experimental Forest (Oregon, USA) and replicate-in-time experiments in four watersheds. We interpret the data using a series of metrics describing river corridor exchange and solute transport, testing for consistent direction and magnitude of relationships relating these metrics to discharge and local geomorphic setting. We confirmed systematic decrease in river corridor exchange space through the river networks, from headwaters to the larger mainstem. However, we did not find systematic variation with changes in discharge through time, nor with local geomorphic setting. While interpretation of our results is complicated by problems with the analytical methods, they are sufficiently robust for us to conclude that space-for-time and time-for-space substitutions are not appropriate in our study system. Finally, we suggest two strategies that will improve the interpretability of tracer test results and help the hyporheic community develop robust data sets that will enable comparisons across multiple sites and/or discharge conditions.

Hydrology and Earth System Sciences↗