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Using packrat middens to assess how grazing influences vegetation change in Glen Canyon National Recreation Area, Utah

The fossil and sub-fossil plant macrofossils and pollen grains found in packrat middens can serve as important proxies for climate and vegetation change in the arid Southwestern United States. A new application for packrat midden research is in understanding post-settlement vegetation changes caused by the grazing of domesticated animals. This work examines a series of 27 middens from Glen Canyon National Recreation Area (GLCA), spanning from 995 yr BP to the present, which detail vegetation during the periods just prior to, and following, the introduction of domesticated grazers. By comparing middens deposited before and after the start of grazing by domesticated sheep and cattle, the effect on the native plant communities through time can be determined. This analysis of change through time is augmented by measurements of change through space by contrasting contemporaneous middens from nearby similar grazed and ungrazed sites. These comparisons are only made possible by the presence of inaccessible ungrazed areas surrounded by steep cliffs. Multivariate ordinations of the plant assemblages from packrat middens demonstrated that even though all middens were selected from similar geologic substrates, soils, and vegetation type, their primary variability was site-to-site. This suggests that selecting comparable grazed versus ungrazed study treatments would be difficult, and that two similar sites several kilometers apart should not be assumed to have been the same prior to grazing without pre-grazing data. But, the changes through time on grazed areas, as well as the differences between grazed and ungrazed areas in the diversity of certain taxonomic groups, both suggest that grazing by domesticated ungulates has had a noticeable effect on the vegetation. The changes seen through time suggested that grazing lowered the number of taxa recorded and lessened the pre-existing differences within sites, homogenizing the resultant plant associations. Late Holocene pre-settlement middens, and modern middens from ungrazed areas, contained more native grasses, skunkbush sumac (Rhus trilobata), blackbrush (Coleogyne ramosissima), winterfat (Krascheninnikovia lanata), Utah serviceberry (Amelanchier utahensis), and roundleaf buffaloberry (Shepherdia rotundifolia) than modern middens from grazed areas. Pollen data supported the macrofossil data, recording decreases in pollen of the goosefoot family (Chenopodiaceae), grass family (Poaceae), and globemallow (Sphaeralcea spp.) from pre- to post-settlement.

Utah↗

Plant responses, climate pivot points, and trade-offs in water-limited ecosystems

Plant species in dryland ecosystems are limited by water availability and may be vulnerable to increases in aridity. Methods are needed to monitor and assess the rate of change in plant abundance and composition in relation to climate, understand the potential for degradation in dryland ecosystems, and forecast future changes in plant species assemblages. I employ nearly a century of vegetation monitoring data from three North American deserts to demonstrate an approach to determine plant species responses to climate and critical points over a range of climatic conditions at which plant species shift from increases to decreases in abundance (climate pivot points). I assess these metrics from a site to regional scale and highlight how these indicators of plant performance can be modified by the physical and biotic environment. For example, shrubs were more responsive to drought and high temperatures on shallow soils with limited capacity to store water and fine-textured soils with slow percolation rates, whereas perennial grasses were more responsive to precipitation in sparse shrublands than in relatively dense grasslands and shrublands, where competition for water is likely more intense. The responses and associated climate pivot points of plant species aligned with their lifespan and structural characteristics, and the relationship between responses and climate pivot points provides evidence of the trade-off between the capacity of a plant species to increase in abundance when water is available and its drought resistance.

Arizona;New Mexico;Texas;Utah↗

Coupled nitrogen and calcium cycles in forests of the Oregon Coast Range

Nitrogen (N) is a critical limiting nutrient that regulates plant productivity and the cycling of other essential elements in forests. We measured foliar and soil nutrients in 22 young Douglas-fir stands in the Oregon Coast Range to examine patterns of nutrient availability across a gradient of N-poor to N-rich soils. N in surface mineral soil ranged from 0.15 to 1.05% N, and was positively related to a doubling of foliar N across sites. Foliar N in half of the sites exceeded 1.4% N, which is considered above the threshold of N-limitation in coastal Oregon Douglas-fir. Available nitrate increased five-fold across this gradient, whereas exchangeable magnesium (Mg) and calcium (Ca) in soils declined, suggesting that nitrate leaching influences base cation availability more than soil parent material across our sites. Natural abundance strontium isotopes (87Sr/86Sr) of a single site indicated that 97% of available base cations can originate from atmospheric inputs of marine aerosols, with negligible contributions from weathering. Low annual inputs of Ca relative to Douglas-fir growth requirements may explain why foliar Ca concentrations are highly sensitive to variations in soil Ca across our sites. Natural abundance calcium isotopes (??44Ca) in exchangeable and acid leachable pools of surface soil measured at a single site showed 1 per mil depletion relative to deep soil, suggesting strong Ca recycling to meet tree demands. Overall, the biogeochemical response of these Douglas-fir forests to gradients in soil N is similar to changes associated with chronic N deposition in more polluted temperate regions, and raises the possibility that Ca may be deficient on excessively N-rich sites. We conclude that wide gradients in soil N can drive non-linear changes in base-cation biogeochemistry, particularly as forests cross a threshold from N-limitation to N-saturation. The most acute changes may occur in forests where base cations are derived principally from atmospheric inputs. ?? 2006 Springer Science+Business Media, Inc.

Ecosystems↗

Controls of vegetation structure and net primary production in restored grasslands

1. Vegetation structure and net primary production (NPP) are fundamental properties of ecosystems. Understanding how restoration practices following disturbance interact with environmental factors to control these properties can provide insight on how ecosystems recover and guide management efforts. 2. We assessed the relative contribution of environmental and restoration factors in controlling vegetation structure, above- and below-ground investment in production across a chronosequence of semiarid Conservation Reserve Program (CRP) fields recovering from dryland wheat cropping relative to undisturbed grassland. Importantly, we determined the role of plant diversity and how seeding either native or introduced perennial grasses influenced the recovery of vegetation properties. 3. Plant basal cover increased with field age and was highest in CRP fields seeded with native perennial grasses. In contrast, fields seeded with introduced perennial grasses had tall-growing plants with relatively low basal cover. These vegetation structural characteristics interacted with precipitation, but not soil characteristics, to influence above-ground NPP (ANPP). Fields enrolled in the CRP program for >7 years supported twice as much ANPP as undisturbed shortgrass steppe in the first wet year of the study, but all CRP fields converged on a common low amount of ANPP in the following dry year and invested less than half as much as the shortgrass steppe in below-ground biomass. 4. ANPP in CRP fields seeded with native perennial grasses for more than 7 years was positively related to species richness, whereas ANPP in CRP fields seeded with introduced perennial grasses were controlled more by dominant species. 5. Synthesis and applications. Seeding with introduced, instead of native, perennial grasses had a strong direct influence on vegetation structure, including species richness, which indirectly affected NPP through time. However, the effects of restoring either native or introduced grasses on NPP were secondary to low water availability. Therefore, restoration strategies that maximize basal cover and below-ground biomass, which promote water acquisition, may lead to high resilience in semiarid and arid regions.

Colorado↗

Concentrations of nutrients at the water table beneath forage fields receiving seasonal applications of manure, Whatcom County, Washington, autumn 2011–spring 2015

The U.S. Geological Survey, in cooperation with the Whatcom Conservation District (WCD), collected groundwater-quality data for roughly 3 years (October 2011–May 2015) from near the water table beneath forage fields receiving regular seasonal applications of liquid dairy manure in Whatcom County, Washington. The work was done as part of an evaluation of WCD’s prototypical Application Risk Management (ARM) decision support system. The ARM system uses a combination of field-specific hydrology, stage of crop-growth, manure management practices, soil conditions, and precipitation forecast to evaluate the timing of manure application via a set of decision support tools (Manure Spreading Advisory, ARM Worksheet, manure application setback distances) in order to reduce the risk of contamination of surface water and groundwater. The ARM system’s effectiveness in reducing leaching of nitrate to groundwater was evaluated by monitoring nitrate concentrations in recently recharged groundwater beneath paired test plots receiving manure application scheduled using either conventional (CON) manure scheduling procedures, which utilize fixed start and end dates for manure application along with projected crop nutrient requirements or ARM manure scheduling procedures using an approach to manure application timing based on projected crop nutrient needs, field conditions, and weather forecast. Water-quality samples from the surface of the water table were collected synoptically from paired test plots (2–5 monitoring wells per test plot) at approximately monthly intervals at three different dairy field sites. Water-quality samples from near the water table were isolated from the underlying aquifer using a combination of an inflatable packer and a fine-grained sand pack encompassing the well-screen interval. Concentrations of nitrate and chloride measured at the water table beneath test plots were highly variable. Concentrations of nitrate ranged from non-detectable to 116 milligrams nitrogen per liter (mg-N/L), and chloride ranged from 1.15 to 153 mg/L. In each test plot, seasonal variations were much greater than spatial variations. Differences in nitrate concentrations in groundwater between the two treatments were inconclusive. Nitrate concentrations in groundwater at paired treatment plots (Mann Whitney, p<0.05) were significantly lower beneath the ARM treatment plot at site B, yet significantly higher beneath the ARM treatment plot at site C. Nitrate concentrations in ground water varied significantly among individual wells at each site (Kruskal-Wallis, p<0.05), indicating that leaching of nitrates from soil following manure application is spatially variable at the field scale tested regardless of manure application strategy. At all three paired test plots, average concentrations of nitrate and chloride at the water table were lowest near the end of the growing season (September) and increased rapidly with the onset of autumn rains (October–December). Under both the conventional (calendar-based) and treatment (ARM-based) manure application scheduling systems, high soil nitrate concentrations in autumn were coincident with rising groundwater levels, suggesting that nitrate and chloride were flushed from soil to groundwater by recharge from the seasonal rains. Under both treatments, concentrations of nitrate in shallow (10–25 feet) groundwater beneath forage fields receiving manure applications were greater than the nitrate drinking water standard of 10 mg-N/L in approximately 85 percent of samples. Yearly mass loading of nitrogen to the groundwater system calculated from nitrate concentrations at the water table and estimates of recharge volume ranged from 86 to 196 pounds-N per acre, which was equivalent to approximately 16–37 percent of the recommended manure application rate for projected forage production yield of 7 dry tons per acre per year. Manure nitrogen applied in the autumn, when crop nutrient needs decrease due to reduced sunlight and cooler temperatures and commensurate with ongoing mineralization of soil organic-nitrogen and increased seasonal precipitation, are more likely to exceed the immediate plant nutritional requirements and hence be flushed to groundwater than manure applications occurring near the peak of the growing season.

Washington↗

Influence of recharge basins on the hydrology of Nassau and Suffolk Counties, Long Island, New York

An investigation of recharge basins on Long Island was made by the U.S. Geological Survey in cooperation with the New York State Department of Environmental Conservation, Nassau County Department of Public Works, Suffolk County Department of Environmental Control, and Suffolk County Water Authority. The major objectives of the study were to (1) catalog basic physical data on the recharge basins in use on Long Island, (2) measure quality and quantity of precipitation and inflow, (3) measure infiltration rates at selected recharge basins, and (4) evaluate regional effects of recharge basins on the hydrologic system of Long Island. The area of study consists of Nassau and Suffolk Counties -- about 1,370 square miles -- in eastern Long Island, N.Y. Recharge basins, numbering more than 2,100 on Long Island in 1969, are open pits in moderately to highly permeable sand and gravel deposits. These pits are used to dispose of storm runoff from residential, industrial, and commercial areas, and from highways, by infiltration of the water through the bottom and sides of the basins. The hydrology of three recharge basins on Long Island -- Westbury, Syosset, and Deer Park basins -- was studied. The precipitation-inflow relation showed that the average percentages of precipitation flowing into each basin were roughly equivalent to the average percentages of impervious areas in the total drainage areas of the basins. Average percentages of precipitation flowing into the basins as direct runoff were 12 percent at the Westbury basin, 10 percent at the Syosset basin, and 7 percent at the Deer Park basin. Numerous open-bottomed storm-water catch basins at Syosset and Deer Park reduced the proportion of inflow to those basins, as compared with the Westbury basin, which has only a few open-bottomed catch basins. Inflow hydrographs for each basin typify the usual urban runoff hydrograph -- steeply rising and falling limbs, sharp peaks, and short time bases. Unit hydrographs for the Westbury and the Syosset basins are not expected to change; however, the unit hydrograph for the Deer Park basin is expected to broaden somewhat as a result of additional future house construction within the drainage area. Infiltration rates averaged 0.9 fph (feet per hour) for 63 storms between July 1967 and May 1970 at the Westbury recharge basin, 0.8 fph for 22 storms from July 1969 to September 1970 at the Syosset recharge basin, and 0.2 fph for 24 storms from March to September 1970 at the Deer Park recharge basin. Low infiltration rates at Deer Park resulted mainly from (1) a high percentage of eroded silt, clay, and organic debris washed in from construction sites in the drainage area, which partly filled the interstices of the natural deposits, and (2) a lack of a well-developed plant-root system on the floor of the younger basin, which would have kept the soil zone more permeable. The apparent rate of movement of storm water through the unsaturated zone below each basin averaged 5.5 fph at Westbury, 3.7 fph at Syosset, and 3.1 fph at Deer Park. The rates of movement for storms during the warm months (April through October) were slightly higher than average, probably because the recharging water was warmer than it was during the rest of the year, and therefore, was slightly less viscous. On the average, a 1-inch rainfall resulted in a peak rise of the water table directly below each basin of 0.5 foot; a 2-inch rainfall resulted in a peak rise of about 2 feet. The mound commonly dissipated within 1 to 4 days at Westbury, 7 days to more than 15 days at Syosset, and 1 to 3 days at Deer Park, depending on the magnitude of the peak buildup. Average annual ground-water recharge was estimated to be 6.4 acre-feet at the Westbury recharge basin, 10.3 acre-feet at the Syosset recharge basin, and 29.6 acre-feet at the Deer Park recharge basin. Chemical composition of precipitation at Westbury, Syosset, and Deer Park drainage areas was similar:

Water Supply Paper↗

Mid-contract management alters conservation reserve program vegetation in the central and western United States

Disturbances such as grazing, fire, and burrowing are historically important in North American grasslands, and plans for restoring disturbance regimes are often required for successful restoration. The U.S. Department of Agriculture’s Conservation Reserve Program (CRP) has become the dominant grassland restoration mechanism in many areas, and requires planned disturbances known as mid-contract management (MCM). We recorded evidence of MCM in CRP fields across a 14-state region of the western and central United States, then revisited fields after one to five years to characterize bare ground and vegetative cover and composition using edge-of-road visual surveys. We found a reduced cover of grasses up to five years after MCM, and a concomitant increased cover of flowering forbs and diversity of pollinator-friendly forbs. There was little measurable change in overall plant cover or bare ground cover between one and five years after MCM, though bare soil cover did increase slightly. Baseline tree and shrub covers were very low on average but highly variable due to outliers with high woody cover. After MCM, the presence of woody vegetation remained low and relatively constant. Grazing and haying resulted in a lower probability of noxious grass presence than mowing or disking, but haying and disking were better for inhibiting the presence of noxious forbs. These results show that MCM can be a useful tool for maintaining vegetation quality. The results also point to an important need to understand factors that influence the effects of MCM, including disturbance technique, disturbance frequency, drought, and climate.

Ecological Restoration↗

Assessment of suitable habitat for Phragmites australis (common reed) in the Great Lakes coastal zone

In the Laurentian Great Lakes, the invasive form of Phragmites australis (common reed) poses a threat to highly productive coastal wetlands and shorelines by forming impenetrable stands that outcompete native plants. Large, dominant stands can derail efforts to restore wetland ecosystems degraded by other stressors. To be proactive, landscape-level management of Phragmites requires information on the current spatial distribution of the species and a characterization of areas suitable for future colonization. Using a recent basin-scale map of this invasive plant’s distribution in the U.S. coastal zone of the Great Lakes, environmental data (e.g., soils, nutrients, disturbance, climate, topography), and climate predictions, we performed analyses of current and predicted suitable coastal habitat using boosted regression trees, a type of species distribution modeling. We also investigated differential influences of environmental variables in the upper lakes (Lakes Superior, Michigan, and Huron) and lower lakes (Lakes St. Clair, Erie, and Ontario). Basin-wide results showed that the coastal areas most vulnerable to Phragmites expansion were in close proximity to developed lands and had minimal topographic relief, poorly drained soils, and dense road networks. Elevated nutrients and proximity to agriculture also influenced the distribution of Phragmites . Climate predictions indicated an increase in suitable habitat in coastal Lakes Huron and Michigan in particular. The results of this study, combined with a publicly available online decision support tool, will enable resource managers and restoration practitioners to target and prioritize Phragmites control efforts in the Great Lakes coastal zone.

Great Lakes↗

Micromorphology and stable-isotope geochemistry of historical pedogenic siderite formed in PAH-contaminated alluvial clay soils, Tennessee, U.S.A

Alluvial clay soil samples from six boreholes advanced to depths of 400-450 cm (top of limestone bedrock) from the Chattanooga Coke Plant (CCP) site were examined micromorphologically and geochemically in order to determine if pedogenic siderite (FeCO3) was present and whether siderite occurrence was related to organic contaminant distribution. Samples from shallow depths were generally more heavily contaminated with polycyclic aromatic hydrocarbons (PAHs) than those at greater depth. The upper 1 m in most boreholes consisted of mixtures of anthropogenically remolded clay soil fill containing coal clinker, cinder grains, and limestone gravel; most layers of coarse fill were impregnated with creosote and coal tar. Most undisturbed soil (below 1 m depth) consisted of highly structured clays exhibiting fine subangular blocky ped structures, as well as redox-related features. Pedogenic siderite was abundant in the upper 2 m of most cores and in demonstrably historical (< 100 years old) soil matrices. Two morphologies were identified: (1) sphaerosiderite crystal spherulites ranging from 10 to 200 um in diameter, and (2) coccoid siderite comprising grape-like "clusters" of crystals 5-20 ??n in diameter. The siderite, formed in both macropores and within fine-grained clay matrices, indicates development of localized anaerobic, low-Eh conditions, possibly due to microbial degradation of organic contaminants. Stable-isotope compositions of the siderite have ??13C values spanning over 25%o (+7 to - 18%o VPDB) indicating fractionation of DIC by multiple microbial metabolic pathways, but with relatively constant ??18O values from (-4.8 ?? 0.66%o VPDB) defining a meteoric sphaerosiderite line (MSL). Calculated isotope equilibrium water ??18O values from pedogenic siderites at the CCP site are from 1 to 5 per mil lighter than the groundwater ??18O values that we estimate for the site. If confirmed by field studies in progress, this observation might call for a reevaluation of low-temperature siderite-water 18O fractionations. Investigations at the CCP site thus provide valuable information on the geochemical conditions under which siderite can form in modern soils, and thus insight on controls on siderite formation in ancient soils. Copyright ?? 2010, SEPM (Society for Sedimentary Geology).

Journal of Sedimentary Research↗

Stormwater reduction and water budget for a rain garden on sandy soil, Gary, Indiana, 2016–18

Stormwater reduction measures, or green infrastructure, were implemented in the parking area at Gary City Hall, Gary, Indiana, with the intention of reducing stormwater discharge to the sewers. A study area, including a centrally located rain garden and the surrounding paved surfaces and green space, was instrumented during both a preconstruction and a postconstruction period to (1) develop water budgets to improve understanding of the rain garden hydrology and (2) determine the quantity of stormwater runoff that was diverted and retained by the green infrastructure instead of reaching the combined storm and sanitary sewer. The study was focused on warm-season precipitation and was monitored during spring, summer, and fall of 2016, 2017 and 2018. Before construction of the rain garden in the parking lot of Gary City Hall in 2017, nearly all precipitation was conveyed away from the parking lot by underground drains, discharged to the sewer, and treated as sanitary waste at the Gary Sanitary District’s treatment plant or discharged directly to local waterways if stormflow exceeded capabilities of the sewage treatment plant. A goal of the Great Lakes Restoration Initiative is the reduction of sewer overflows to local waterways to improve the quality of water entering the Great Lakes. Cities such as Gary benefit financially and environmentally by reducing discharges of stormwater runoff to the sewer system, eliminating the need for treatment. Before implementation of green infrastructure at Gary City Hall, approximately 25 percent of precipitation (approximately 10,200 cubic feet) discharged as stormwater to the sewers through the parking lot drain. After implementation, 2 percent of precipitation discharged to the sewers. For the spring, summer, and fall seasons of 2017 and 2018, 21–24 percent (about 10,700–19,700 cubic feet) of precipitation was captured by the newly installed rain garden. Stormwater discharged to the rain garden infiltrated the sandy soil and was later evaporated from the soil surface, was transpired by plants, or recharged the underlying groundwater aquifer. The percent reduction in stormwater discharged to the storm sewer after the construction of the rain garden was 80.3 percent, equating to approximately 21,400 and 39,300 gallons of stormwater in 2017 and 2018, respectively.

Indiana↗

Small-scale water deficits after wildfires create long-lasting ecological impacts

Ecological droughts are deficits in soil–water availability that induce threshold-like ecosystem responses, such as causing altered or degraded plant-community conditions, which can be exceedingly difficult to reverse. However, 'ecological drought' can be difficult to define, let alone to quantify, especially at spatial and temporal scales relevant to land managers. This is despite a growing need to integrate drought-related factors into management decisions as climate changes result in precipitation instability in many semi-arid ecosystems. We asked whether success in restoration seedings of the foundational species big sagebrush ( Artemisia tridentata ) was related to estimated water deficit, using the SoilWat2 model and data from >600 plots located in previously burned areas in the western United States. Water deficit was characterized by: (1) the standardized precipitation-evapotranspiration index (SPEI), a coarse-scale drought index, and (2) the number of days with wet and warm conditions in the near-surface soil, where seeds and seedlings germinate and emerge (i.e. days with 0–5 cm deep soil water potential >−2.5 MPa and temperature above 0 °C). SPEI, a widely used drought index, was not predictive of whether sagebrush had reestablished. In contrast, wet-warm days elicited a critical drought threshold response, with successfully reestablished sites having experienced seven more wet-warm days than unsuccessful sites during the first March following summer wildfire and restoration. Thus, seemingly small-scale and short-term changes in water availability and temperature can contribute to major ecosystem shifts, as many of these sites remained shrubless two decades later. These findings help clarify the definition of ecological drought for a foundational species and its imperiled semi-arid ecosystem. Drought is well known to affect the occurrence of wildfires, but drought in the year(s) after fire can determine whether fire causes long-lasting, negative impacts on ecosystems.

Oregon, Idaho, Nevada, Utah↗

Photosynthesis of the cyanobacterial soil-crust lichen Collema tenax from arid lands in southern Utah, USA: Role of water content on light and temperature responses of CO2 exchange

1. The gelatinous cyanobacterial Collema tenax is a dominant lichen of biotic soil crusts in the western United States. In laboratory experiments, we studied CO 2 exchange of this species as dependent on water content (WC), light and temperature. Results are compared with performance of green-algal lichens of the same site investigated earlier. 2. As compared with published data, photosynthetic capacity of C. tenax is higher than that of other cyanobacterial and green-algal soil-crust species studied. At all temperatures and photon flux densities of ecological relevance, net photosynthesis (NP) shows a strong depression at high degrees of hydration; maximal apparent quantum-use efficiency of CO 2 fixation is also reduced. Water requirements (moisture compensation point, WC for maximal NP) are higher than that of the green-algal lichens. Collema tenax exhibits extreme ‘sun plant’ features and is adapted to high thallus temperatures. 3. Erratic rain showers are the main source of moisture for soil crusts on the Colorado Plateau, quickly saturating the lichens with liquid water. High water-holding capacity of C. tenax ensures extended phases of favourable hydration at conditions of high light and temperature after the rain for substantial photosynthetic production. Under such conditions the cyanobacterial lichen appears superior over its green-algal competitors, which seem better adapted to habitats with high air humidity, dew or fog as prevailing source of moisture.

Utah↗

Patterns of primary production and ecological drought in Yellowstone

Introduction: Photosynthesis converts sunlight into stored energy in millions of leaves, flowers and seeds that maintain the web of life in Yellowstone. This transformation of energy fixes carbon, supplies organic matter to soils, and can become fuel for wildfire. As the first link of the food chain, new plant biomass is called primary production and provides energy to consumers, including wildlife. While Yellowstone is a mountain environment with deep winter snowpack, the park can get very dry in some years as evidenced by massive wildfires in 1988 and 2016. Droughts like these not only contribute to fire potential, but they affect primary production, the food chain and likely will play an increasingly important role in transforming vegetation structure and composition in the future. Meteorological, agricultural, and hydrological drought have been assessed quantitatively for many years, but key indicators of drought in wildland ecosystems have not been formally defined until recently (Crausbay et al., 2017). One promising new method to do this is by measuring how vegetation responds to negative effects of drought, and positive effects of favorable conditions that offset negative effects of drought. The balance of drought stress and growth has important implications for future vegetation condition as the climate of Yellowstone changes. Monitoring primary production, and predicting future vegetation changes are needed to provide a comprehensive view of park health and anticipate future ecosystem changes (Crabtree et al. 2009, Nemani et al. 2009). Although an important indicator of ecosystem condition, primary production can be time and resource-intensive to monitor in wildland settings using traditional ground-based methods such as clipping and weighing. Fortunately, ground-based methods can be complemented and enhanced by monitoring primary production with satellite imagery. Measurements of solar radiation reflectance in visible and near infra-red wavelengths can indicate primary production at frequent weekly intervals from the Moderate Resolution Imaging Spectrometer (MODIS) on satellites operated by NASA. The Greater Yellowstone Inventory and Monitoring Network (GRYN) uses this information to track changes in primary production across Yellowstone over time. They link these measurements to vegetation types, soils, and climate to understand where and when changes in production have occurred and may occur in the future.

Yellowstone National Park↗

Inferring local competition intensity from patch size distributions: a test using biological soil crusts

Dryland vegetation is inherently patchy. This patchiness goes on to impact ecology, hydrology, and biogeochemistry. Recently, researchers have proposed that dryland vegetation patch sizes follow a power law which is due to local plant facilitation. It is unknown what patch size distribution prevails when competition predominates over facilitation, or if such a pattern could be used to detect competition. We investigated this question in an alternative vegetation type, mosses and lichens of biological soil crusts, which exhibit a smaller scale patch-interpatch configuration. This micro-vegetation is characterized by competition for space. We proposed that multiplicative effects of genetics, environment and competition should result in a log-normal patch size distribution. When testing the prevalence of log-normal versus power law patch size distributions, we found that the log-normal was the better distribution in 53% of cases and a reasonable fit in 83%. In contrast, the power law was better in 39% of cases, and in 8% of instances both distributions fit equally well. We further hypothesized that the log-normal distribution parameters would be predictably influenced by competition strength. There was qualitative agreement between one of the distribution's parameters (&mu;) and a novel intransitive (lacking a 'best' competitor) competition index, suggesting that as intransitivity increases, patch sizes decrease. The correlation of &mu; with other competition indicators based on spatial segregation of species (the C-score) depended on aridity. In less arid sites, &mu; was negatively correlated with the C-score (suggesting smaller patches under stronger competition), while positive correlations (suggesting larger patches under stronger competition) were observed at more arid sites. We propose that this is due to an increasing prevalence of competition transitivity as aridity increases. These findings broaden the emerging theory surrounding dryland patch size distributions and, with refinement, may help us infer cryptic ecological processes from easily observed spatial patterns in the field.

Oikos↗

Plant population and habitat characteristics of the endemic Sonoran Desert cactus Peniocereus striatus in Organ Pipe Cactus National Monument, Arizona

Peniocereus striatus (Brandegee) Buxb. (Cactaceae) is an endemic Sonoran Desert cactus that reaches its northern range limit in southwestern Arizona. One U.S. population occupies a small area of Organ Pipe Cactus National Monument near the U.S./Mexico international boundary, which has been monitored since 1939. An extensive survey conducted in 2002, covering 177 ha, resulted in the discovery of 88 new plants, in addition to the relocation of 57 plants found in previous surveys. Despite potential increases in population size and spatial distribution, mean plant height and number of basal stems has not significantly changed in recent years. Bud scars revealed that a majority of the population was sexually mature. Peniocereus striatus occurrence increased with decreasing slope, spanned every slope aspect, and was highest on rocky soils, but was noticeably low on west and northwest slopes and areas where severe land degradation had previously occurred. Over half of P. striatus plants were nursed by shrubs and subshrubs, while 40% occurred under leguminous trees. A severe frost in January 2002 top-killed 19% of the population, with the greatest damage in drainage bottoms. However, long-term (1944&ndash;2002) climate records show that there has been an overall increase in the number of frost free days in the region, which, coupled with land use change, has implications for the future health of this population.

Arizona↗

The coral reef of South Moloka'i, Hawai'i— Portrait of a sediment-threatened fringing reef

Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years. The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been. The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts. In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a remarkably integrated approach to the reefs of Moloka‘i, combining geology, oceanography, and biology to provide an in-depth understanding of the processes that have made these reefs grow and that now limit them. They have joined old fashioned natural history of marine animals and plants with study of the geological evolution of the island, hydrology, meteorology, and land-use history, to an arsenal of new methods of remote sensing, including aerial photography, laser ranging, infrared thermal mapping, seismic reflection, in-situ instrumentation to measure chemical parameters of water quality, and direct measurements of the physical driving forces affecting them—such as wave energy, currents, sedimentation, and sediment transport. They provide a level of documentation and insight that has never been available for any reef before. A remarkable feature of this book is that it is aimed at the people of Moloka‘i to inform them of what is happening to their reef and what they might do to preserve their vital resources. The scientific data and interpretations are expressed in unusually clear and comprehensible language, free of the professional jargon that makes most technical publications impenetrable to the public that most needs to know about them, yet without loss of scientific rigor. Here readers will see clearly explained the whole path of soil loss, from the impacts of wild pigs and goats at higher elevations, deforestation of the hills for cattle pasture at lower levels, and denudation of low lands for cash crops. The resulting biological impoverishment has bared the soils, which wash away in flash storms, smothering the inshore reefs, whose growth was already limited because they had grown right up to sea level. The data in this book show that the mud doesn’t get far if it is washed into the sea during a big storm with heavy waves. Afterwards this mud keeps getting stirred up by every succeeding storm, spreading and affecting corals over wider areas until it is finally washed out of the system—and that only happens if there is no more new mud washing onto the reef. I saw this myself a few years ago in Pila‘a Bay on Kaua‘i, where a bulldozed hillside of abandoned sugar cane fields had slumped right on top of a coral reef following exceptional rains. Years later, the algae species were zoned in a way that clearly mapped the distribution of nutrients washed into the bay, most likely from fertilizers bound to the eroded soils. That pattern closely mimics, on a small scale, that shown in Moloka‘i in this volume, where the inner reef is covered with algae, zoned by species in a way that points to land-based sources of nutrients, while the outermost reef slope is still coral dominated, and the deep algae seem to indicate deep-water nutrient upwelling. What of the future? The Hawaiian Islands have been exceptionally fortunate to be spared the worst coral heatstroke death from high temperatures, at least to date. So far, the worst global warming impacts have luckily been small in this region, and the small number of people on Moloka‘i has kept population densities, and sewage pollution, low compared to the more developed islands. Nutrients from years of sugar and pineapple fertilization, and the washing of this soil onto the reefs, show clear influences on the pattern of algae on the reef. Even at very low levels of nutrients, well below that which drives algae to smother and kill coral reefs, more algae is present. Soil erosion control is therefore the key to better management of both nutrients and turbidity on Moloka‘i reefs. To that end land management actions mentioned in this book, such as suppressing wild fires and eliminating wild goats and pigs, could be made even more effective if supplemented by active erosion control using plants whose roots bind the soil effectively in place. Through all of these efforts, Hina and the people of Moloka‘i could be happy again!

Hawaii↗

Ecotoxicological damage from zinc smelting at Palmerton, Pennsylvania

The two zinc smelters at Palmerton, PA emitted huge amounts of contaminants ( 260,000 t of Zn, 3,300 t of Cd, 6,800 t of Pb) to the air and severely damaged the forest on Blue Mountain. The high Zn concentrations in soil killed tree seedlings by inhibiting root elongation. The result was a forest with too few young trees. When natural stresses such as fire challenged the forest, the forest failed to regenerate, and the exposed soil eroded down the steep slopes. Tree species that could sprout were favored over those that developed from seeds. As a result of high zinc concentrations, the lichen and moss communities were depauperate for at least 20 km along Blue Mountain. The denuded areas are in the process of being reclaimed with the addition of a mixture of fly ash and sewage sludge, which is seeded with grasses tolerant to the harsh conditions. In preliminary experiments, the fly ash and sewage sludge mixture was stable, despite the steepness of the slopes of the reclaimed sites on Blue Mountain. Zinc emissions reduced the decomposition rate of plant material on Blue Mountain. The partially decomposed litter, in particular, accumulated on the surface of the mineral soil. The populations of both microorganisms and arthropods were greatly reduced in soils near the smelters. Samples of litter collected from sites spanning 30 km were toxic to woodlice, and Zn was shown to be the toxic factor. A white-tailed deer examined had a very high renal Zn concentration and an articular lesion in one of its hind legs that closely resembled the lesions reported in Zn-poisoned horses. Zinc concentrations were regulated in wildlife tissues and were not reliable indicators of exposure, except in extreme cases. Two songbirds, a shrew, and several rabbits contained Pb concentrations that were suggested to be toxic. Shrews and ground-feeding songbirds accumulated relatively high concentrations of Pb. Exposure to Pb seemed to be related to the amount of soil that an animal ingests. Some white-tailed deer and cottontails had renal Cd concentrations near 600 ppm w.w., which is associated with renal damage in other mammals. The accumulation of Cd was greatest in wildlife that lived longest. The destruction of the habitat for wildlife on Blue Mountain decreased wildlife populations. Populations of insectivorous birds, however, were depressed well beyond the area of obvious damage to the forest. Forest-floor salamanders were completely absent from study sites spanning 18 km along Blue Mountain. Actual reductions in wildlife populations were much greater than would have been predicted from habitat suitability models alone.

Book chapter↗

Homogenization of soil seed bank communities by fire and invasive species in the Mojave Desert

Soil seed banks help maintain species diversity through temporal storage effects and function as germination pools that can optimize fitness across varying environmental conditions. These characteristics promote the persistence of native plant communities, yet disturbances such as fire and associated invasions by non-native species can disrupt these reserves, fundamentally altering successional trajectories. This may be particularly true in deserts, where native plant communities are less adapted to fire. While studies of fire effects on desert plant communities are not uncommon, information regarding the short- and long-term effects of fire on seed banks is less available. To better understand the influence of fire and invasive species on desert seed banks, we investigated soil seed bank biodiversity from 30 wildfires that burned between 1972 and 2010 across the Mojave Desert ecoregion of North America. We assessed how characteristics of fire regimes (frequency, time since fire, and burn severity) interacted with climate and invasive plants on measures of α-, β-, and γ-diversities. Because β-diversity is a direct measure of community variability and reveals important information about biodiversity loss, we further examined the nestedness and turnover components of β-diversity. Mean α- and γ-diversities were generally higher for burned locations than in unburned reference sites, however individual fire variables had little influence on patterns of seed bank diversity. Burned area seed banks tended to be dominated by non-native invasive species, primarily two grasses, ( Bromus rubens , Bromus tectorum ), as well as an invasive forb ( Erodium cicutarium ). The most striking pattern we observed was a collective sharp decline in α-, β-, and γ-diversities with increased invasive species dominance, indicating the homogenization of seed bank communities with the colonization of invasive species after fire. Evidence of homogenization was further supported by reduced turnover and increased nestedness in burn areas compared to reference areas indicating potential biodiversity loss. Our findings highlight how biological processes such as plant invasions can combine with disturbance from fire to alter patterns of seed bank composition and diversity in desert ecosystems.

Frontiers in Ecology and Evolution↗