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At least 1,081 records · Page 60Linked to original sources

USGS1992

The "terminal Triassic catastrophic extinction event" in perspective: A review of carboniferous through Early Jurassic terrestrial vertebrate extinction patterns

A catastrophic terminal Triassic extinction event among terrestrial vertebrates is not supported by available evidence. The current model for such an extinction is based on at least eight weak or untenable assumptions: (1) a terminal Triassic extinction-inducing asteroid impact occurred, (2) a terminal Triassic synchronous mass extinction of terrestrial vertebrates occurred, (3) a concurrent terminal Triassic marine extinction occurred, (4) all terrestrial vertebrate families have similar diversities and ecologies, (5) changes in familial diversity can be gauged accurately from the known fossil record, (6) extinction of families can be compared through time without normalizing for changes in familial diversity through time, (7) extinction rates can be compared without normalizing for differing lengths of geologic stages, and (8) catastrophic mass extinctions do not select for small size. These assumptions have resulted in unsupportable and (or) erroneous conclusions. Carboniferous through Early Jurassic terrestrial vertebrate families mostly have evolution and extinction patterns unlike the vertebrate evolution and extinction patterns during the terminal Cretaceous event. Only the Serpukhovian (mid Carboniferous) extinction event shows strong analogy to the terminal Cretaceous event. Available data suggest no terminal Triassic extinction anomaly, but rather a prolonged and nearly steady decline in the global terrestrial vertebrate extinction rate throughout the Triassic and earliest Jurassic.

Palaeogeography, Palaeoclimatology, Palaeoecology↗

USGS2012

Freshwater to seawater transitions in migratory fishes

The transition from freshwater to seawater is integral to the life history of many fishes. Diverse migratory fishes express anadromous, catadromous, and amphidromous life histories, while others make incomplete transits between freshwater and seawater. The physiological mechanisms of osmoregulation are widely conserved among phylogenetically diverse species. Diadromous fishes moving between freshwater and seawater develop osmoregulatory mechanisms for different environmental salinities. Freshwater to seawater transition involves hormonally mediated changes in gill ionocytes and the transport proteins associated with hypoosmoregulation, increased seawater ingestion and water absorption in the intestine, and reduced urinary water losses. Fishes attain salinity tolerance through early development, gradual acclimation, or environmentally or developmentally cued adaptations. This chapter describes adaptations in diverse taxa and the effects of salinity on growth. Identifying common strategies in diadromous fishes moving between freshwater and seawater will reveal the ecological and physiological basis for maintaining homeostasis in different salinities, and inform efforts to conserve and manage migratory euryhaline fishes.

Book chapter↗

USGS2009

The potential of mid- and near-infrared diffuse reflectance spectroscopy for determining major- and trace-element concentrations in soils from a geochemical survey of North America

In 2004, soils were collected at 220 sites along two transects across the USA and Canada as a pilot study for a planned soil geochemical survey of North America (North American Soil Geochemical Landscapes Project). The objective of the current study was to examine the potential of diffuse reflectance (DR) Fourier Transform (FT) mid-infrared (mid-IR) and near-infrared (NIRS) spectroscopy to reduce the need for conventional analysis for the determination of major and trace elements in such continental-scale surveys. Soil samples (n = 720) were collected from two transects (east-west across the USA, and north-south from Manitoba, Canada to El Paso, Texas (USA), n = 453 and 267, respectively). The samples came from 19 USA states and the province of Manitoba in Canada. They represented 31 types of land use (e.g., national forest, rangeland, etc.), and 123 different land covers (e.g., soybeans, oak forest, etc.). The samples represented a combination of depth-based sampling (0-5 cm) and horizon-based sampling (O, A and C horizons) with 123 different depths identified. The set was very diverse with few samples similar in land use, land cover, etc. All samples were analyzed by conventional means for the near-total concentration of 49 analytes (C total , C carbonate and C organic , and 46 major and trace elements). Spectra were obtained using dried, ground samples using a Digilab FTS-7000 FT spectrometer in the mid- (4000-400 cm -1 ) and near-infrared (10,000-4000 cm -1 ) at 4 cm -1 resolution (64 co-added scans per spectrum) using a Pike AutoDIFF DR autosampler. Partial least squares calibrations were develop using: (1) all samples as a calibration set; (2) samples evenly divided into calibration and validation sets based on spectral diversity; and (3) samples divided to have matching analyte concentrations in calibration and validation sets. In general, results supported the conclusion that neither mid-IR nor NIRS would be particularly useful in reducing the need for conventional analysis of soils from this continental-scale geochemical survey. The extreme sample diversity, likely caused by the widely varied parent material, land use at the site of collection (e.g., grazing, recreation, agriculture, etc.), and climate resulted in poor calibrations even for C total , C organic and C carbonate . The results indicated potential for mid-IR and NIRS to differentiate soils containing high concentrations (>100 mg/kg) of some metals (e.g., Co, Cr, Ni) from low-level samples (<50 mg/kg). However, because of the small number of high-level samples, it is possible that differentiation was based on factors other than metal concentration. Results for Mg and Sr were good, but results for other metals examined were fair to poor, at best. In essence, it appears that the great variation in chemical and physical properties seen in soils from this continental-scale survey resulted in each sample being virtually unique. Thus, suitable spectroscopic calibrations were generally not possible.

Applied Geochemistry↗

USGS2015

Demersal fish distribution and habitat use within and near Baltimore and Norfolk Canyons, U.S. Middle Atlantic Slope

Numerous submarine canyons along the United States middle Atlantic continental margin support enhanced productivity, diverse and unique habitats, active fisheries, and are vulnerable to various anthropogenic disturbances. During two cruises (15 Aug–2 Oct 2012 and 30 Apr–27 May 2013), Baltimore and Norfolk canyons and nearby areas (including two cold seeps) were intensively surveyed to determine demersal fish distributions and habitat associations. Overall, 34 ROV dives (234–1612 m) resulted in 295 h of bottom video observations and numerous collections. These data were supplemented by 40, 30-min bottom trawl samples. Fish observations were assigned to five general habitat designations: 1) sand-mud (flat), 2) sloping sand-mud with burrows, 3) low profile gravel, rock, boulder, 4) high profile, canyon walls, rocks or ridges, and 5) seep-mixed hard and soft substrata, the later subdivided into seven habitats based on amounts of dead mussel and rock cover. The influence of corals, sponges and live mussels (seeps only) on fish distributions was also investigated. Both canyon areas supported abundant and diverse fish communities and exhibited a wide range of habitats, including extensive areas of deep-sea corals and sponges and two nearby methane seeps (380–430 m, 1455–1610 m). All methods combined yielded a total of 123 species of fishes, 12 of which are either new records for this region or have new range data. Depth was a major factor that separated the fish faunas into two zones with a boundary around 1400 m. Fishes defining the deeper zone included Lycodes sp.,Dicrolene introniger, Gaidropsaurus ensis, Hydrolagus affinis, Antimora rostrata, andAldrovandia sp. Fishes in the deep zone did not exhibit strong habitat affinities, despite the presence of a quite rugged, extensive methane seep. We propose that habitat specificity decreases with increasing depth. Fishes in the shallower zone, characterized by Laemonema sp., Phycis chesteri, Nezumia bairdii, Brosme brosme, and Helicolenus dactylopterus, exhibited a variety of habitat use patterns. In general, fish assemblages in the soft substrata areas (dominated by P. chesteri, N. bairdii, Glyptocephalus cynoglossus, Lophius americanus, Merluccius albidus) were different from those in more complex habitats (dominated by Laemonema spp., Hoplostethus spp., B. brosme,Benthocometes robustus, L. americanus, Dysommina rugosa). Although, when present, the dense coral and sponge cover did not statistically affect general fish assemblage patterns in hard bottom habitats, these sessile organisms markedly increased habitat complexity, and some fish species exhibited close association with them. Fish species compositions in the two canyons were not substantially different from the surrounding slopes. However, the diversity of habitats within both the canyons and seeps exerted an important influence on assemblage structure. At least for some species (e.g., B. brosme) canyon and seep environments may be a refuge from intensive bottom fishing activities. We frequently observed evidence of commercial and recreational fishing activity (lost gear on bottom and fishing boats in the area) throughout the canyons and some resulting habitat damage. Conservation measures for the unique and more vulnerable areas (seep and coral habitats) have recently been approved.

Baltimore Canyon, Norfolk Canyon↗

USGS2015

Water masses, ocean fronts, and the structure of Antarctic seabird communities: putting the eastern Bellingshausen Sea in perspective

Waters off the western Antarctic Peninsula (i.e., the eastern Bellingshausen Sea) are unusually complex owing to the convergence of several major fronts. Determining the relative influence of fronts on occurrence patterns of top-trophic species in that area, therefore, has been challenging. In one of the few ocean-wide seabird data syntheses, in this case for the Southern Ocean, we analyzed ample, previously collected cruise data, Antarctic-wide, to determine seabird species assemblages and quantitative relationships to fronts as a way to provide context to the long-term Palmer LTER and the winter Southern Ocean GLOBEC studies in the eastern Bellingshausen Sea. Fronts investigated during both winter (April–September) and summer (October–March) were the southern boundary of the Antarctic Circumpolar Current (ACC), which separates the High Antarctic from the Low Antarctic water mass, and within which are embedded the marginal ice zone and Antarctic Shelf Break Front; and the Antarctic Polar Front, which separates the Low Antarctic and the Subantarctic water masses. We used clustering to determine species' groupings with water masses, and generalized additive models to relate species' densities, biomass and diversity to distance to respective fronts. Antarctic-wide, in both periods, highest seabird densities and lowest species diversity were found in the High Antarctic water mass. In the eastern Bellingshausen, seabird density in the High Antarctic water mass was lower (as low as half that of winter) than found in other Antarctic regions. During winter, Antarctic-wide, two significant species groups were evident: one dominated by Adélie penguins ( Pygoscelis adeliae ) (High Antarctic water mass) and the other by petrels and prions (no differentiation among water masses); in eastern Bellingshausen waters during winter, the one significant species group was composed of species from both Antarctic-wide groups. In summer, Antarctic-wide, a High Antarctic group dominated by Adélie penguins, a Low Antarctic group dominated by petrels, and a Subantarctic group dominated by albatross were evident. In eastern Bellingshausen waters during summer, groups were inconsistent. With regard to frontal features, Antarctic-wide in winter, distance to the ice edge was an important explanatory factor for nine of 14 species, distance to the Antarctic Polar Front for six species and distance to the Shelf Break Front for six species; however, these Antarctic-wide models could not successfully predict spatial relationships of winter seabird density (individual species or total) and biomass in the eastern Bellingshausen. Antarctic-wide in summer, distance to land/Antarctic continent was important for 10 of 18 species, not a surprising result for these summer-time Antarctic breeders, as colonies are associated with ice-free areas of coastal land. Distance to the Shelf Break Front was important for 8 and distance to the southern boundary of the ACC was important for 7 species. These summer models were more successful in predicting eastern Bellingshausen species density and species diversity but failed to predict total seabird density or biomass. Antarctic seabirds appear to respond to fronts in a way similar to that observed along the well-studied upwelling front of the California Current. To understand fully the seabird patterns found in this synthesis, multi-disciplinary at-sea investigations, including a quantified prey field, are needed.

Deep-Sea Research Part II: Topical Studies in Ocea↗

USGS2016

Macrofaunal communities associated with chemosynthetic habitats from the U.S. Atlantic margin: A comparison among depth and habitat types

Hydrocarbon seeps support distinct benthic communities capable of tolerating extreme environmental conditions and utilizing reduced chemical compounds for nutrition. In recent years, several locations of methane seepage have been mapped along the U.S. Atlantic continental slope. In 2012 and 2013, two newly discovered seeps were investigated in this region: a shallow site near Baltimore Canyon (BCS, 366–412 m) and a deep site near Norfolk Canyon (NCS, 1467–1602 m), with both sites containing extensive chemosynthetic mussel bed and microbial mat habitats. Sediment push cores, suction samples, and Ekman box cores were collected to quantify the abundance, diversity, and community structure of benthic macrofauna (>300 μm) in mussel beds, mats, and slope habitats at both sites. Community data from the deep site were also assessed in relation to the associated sediment environment (organic carbon and nitrogen, stable carbon and nitrogen isotopes, grain size, and depth). Infaunal assemblages and densities differed both between depths and among habitat types. Macrofaunal densities in microbial mats were four times greater than those present in mussel beds and slope sediments and were dominated by the annelid families Dorvilleidae, Capitellidae, and Tubificidae, while mussel habitats had higher proportions of crustaceans. Diversity was lower in BCS microbial mat habitats, but higher in mussel and slope sediments compared to NCS habitats. Multivariate statistical analysis revealed specific sediment properties as important for distinguishing the macrofaunal communities, including larger grain sizes present within NCS microbial mat habitats and depleted stable carbon isotopes (δ 13 C) in sediments present at mussel beds. These results suggest that habitat differences in the quality and source of organic matter are driving the observed patterns in the infaunal assemblages, including high β diversity and high variability in the macrofaunal community composition. This study is the first investigation of seep infauna along the U.S. Atlantic slope north of the Blake Ridge Diapir and provides a baseline for future regional comparisons to other seep habitats along the Atlantic margin.

Deep-Sea Research Part II: Topical Studies in Ocea↗

USGS2025

Megafaunal community structure on ferromanganese and phosphorite hardgrounds in the Southern California Borderland

The Southern California Borderland (SCB) is a topographically complex region on the active continental margin that hosts varied hardground habitats, including ferromanganese (FeMn) crusts and phosphorites, marine minerals being considered for resource extraction. The SCB is influenced by seasonal upwelling and terrestrial inputs, and has a well-defined oxygen-minimum zone (OMZ). We analyzed megafaunal community composition, density, and diversity across 41 ROV video transects at 10 SCB hard substrate sites spanning depth (378–2765 m), temperature (1.79–7.96 °C), and oxygen (3.91–105.67 μM) gradients, with varying rock types (FeMn crusts, phosphorites, other rocks). We counted 32,426 individuals representing 146 unique taxa over a total area of 21,935 m 2 . Echinodermata contributed 48 % of the total abundance; Cnidaria 24 %; Porifera 13 %; Annelida 6 %; Arthropoda 6 %; Chordata 2 %; Mollusca, Foraminifera, and Hemichordata <1 %. Megafauna communities showed clear heterogeneity, with density, diversity, and community composition varying among transects within sites and across sites. Rock type recorded no influence on megafaunal density, but habitats that included FeMn crusts had higher diversity and distinct taxonomic composition. Location, depth, and oxygen were the most important variables explaining variance among megafaunal communities, with distinct communities formed at deeper depths and within the OMZ. This study provides baseline information about the megafauna inhabiting SCB hardgrounds, particularly those associated with minerals considered for their resource potential. It extends existing documentation of such communities to greater depths, reveals increased representation of sponges and corals below 1000 m, and highlights the variability within and among deep-sea megafaunal communities, offering context for informed policy decisions.

Southern California borderland↗

USGS2022

Divergent successional trajectories of soil seed bank and post-fire vegetation in a semiarid oak forest: Implications for post-fire ecological restoration

Wildfires are a major disturbance in forest ecosystems around the world and may lead to changes in vegetation succession trajectories. This study examined the impact of time since wildfires on the successional gradients of the degraded Zagros semi-arid oak forest in Iran. Here, we investigated the role of soil seed bank in postfire understory vegetation successional trajectories after wildfires and how time-since-fire influenced plant recovery of this disturbed site. Three adjacent high severity burned areas with different fire histories and the same physiographic conditions were considered. In sampling, we surveyed both aboveground understory vegetation and soil seed bank in all the 96 plots taken along the transects of each area. Soil samples were also collected from each plot and physicochemical properties were analysed in the laboratory. Species composition in the seed bank showed divergent successional trajectories compared to the aboveground vegetation after wildfire. The diversity of soil seed banks followed a gradual decrease, while aboveground understory plants revealed an increasing trend of diversity over time. In addition, the physical and chemical composition of soils was significantly altered by fire. This study presents important insights into soil seed bank dynamics compared to the corresponding aboveground vegetation during postfire succession. The observed changes in diversity and vegetation composition after wildfire can give important insights to management strategies involving prescribed fire in the restoration efforts of highly disturbed semiarid oak forest.

Ecological Engineering↗

USGS2022

Evaluating acid-aluminum stress in streams of the Northeastern U.S. at watershed, fish community and physiological scales

In spite of overall improvements in air and water quality, biological stress from low pH and high concentrations of inorganic aluminum continue to impact fish and fish habitat in northeastern North America, with independent and interactive effects on individuals, populations and communities. Integrative indicators can therefore be useful in monitoring both impact and recovery across multiple scales. Using coupled water chemistry (pH, conductivity, and base cation and inorganic aluminum concentration), geographic (site elevation and watershed area) and biological (fish diversity, fish abundance, gill aluminum concentration and gill physiology) data, we developed an integrated indicator of acid aluminum stress across the White and Green mountains in central New England, USA. As has been established in a number of previous studies, preliminary analysis clearly indicated that across all sites, inorganic aluminum concentration was consistently greatest during the spring season. Structural Equation modelling (SEM) revealed that toxic conditions (concurrent low pH and high concentrations of inorganic aluminum) were well summarized with an integrated toxicity score, related to both base cation concentrations and elevation, with sites at higher elevations more likely to experience toxic conditions as well as low base cation concentrations. As hypothesized, fish diversity and abundance were negatively related to toxicity score. In spite of considerable variation among individuals, gill aluminum was positively related to toxicity score for both Atlantic salmon and brook trout. Observed elevated gill aluminum levels associated with reduced gill metabolic activity in Atlantic salmon smolts from impacted systems likely result in impaired osmoregulatory function and seawater tolerance. Overall, our results suggest that the integrated toxicity score metric is strongly associated with a syndrome of physiological stress, reduced abundance, and low species diversity for stream fishes in New England and can likely serve as a reliable indicator of continued impairment or recovery of acid-aluminum vulnerable systems in this ecoregion.

New Hampshire, Vermont↗

USGS2023

Metabarcoding analysis of meiobenthic biodiversity along the Gulf of Mexico continental shelf

This study explores how diverse the meiobenthic (meiofauna and other benthic micro-eukaryotes) community is throughout the United States Gulf of Mexico (GOM) continental shelf. In late 2010 and 2011, 51 sediment samples were collected along GOM from Texas through Florida at a range of depths (40m–496m). An additional six deep-sea slope sediment cores were collected in December 2010 near the Deepwater Horizon platform (1370–1385m and 1865m). Metabarcoding of the 18S hypervariable V9 region was conducted to assess biodiversity. Within continental shelf samples, there was greater meiobenthic diversity off the Eastern GOM coast in comparison to both Central and Western GOM coast locations. The Eastern GOM coast has known sediment differences from Western GOM sites. These sediment differences along with influences from the Gulf of Mexico Loop Current may account for observed variations in GOM meiobenthic diversity.

Gulf of Mexico↗

USGS2019

The future of recreational fisheries: Advances in science, monitoring, management, and practice

Recreational fisheries (RF) are complex social-ecological systems that play an important role in aquatic environments while generating significant social and economic benefits around the world. The nature of RF is diverse and rapidly evolving, including the participants, their priorities and behaviors, and the related ecological impacts and social and economic benefits. RF can lead to negative ecological impacts, particularly through overexploitation of fish populations and spread of non-native species and genotypes through stocking. Hence, careful management and monitoring of RF is essential to sustain these ecologically and socioeconomically important resources. This special issue on recreational fisheries contains diverse research, syntheses, and perspectives that highlight the advances being made in RF research, monitoring, management, and practice, which we summarize here. Co-management actions are rising, often involving diverse interest groups including government and non-government organizations; applying collaborative management practices can help balance social and economic benefits with conservation targets. Technological and methodological advances are improving the ability to monitor biological, social, and economic dynamics of RF, which underpin the ability to maximize RF benefits through management actions. To ensure RF sustainability, much research focuses on the ecological aspects of RF, as well as the development of management and angling practices that reduce negative impacts on fish populations. For example, angler behavior can be influenced to conform to conservation-minded angling practices through regulations, but is often best accomplished through growing bottom-up social change movements. Anglers can also play an important role in fisheries monitoring and conservation, including providing data on fish abundance and assemblages (i.e., citizen science). The increasing impacts that growing human populations are having on the global environment are threatening many of the natural resources and ecosystem services they provide, including valuable RF. However, with careful development of research initiatives, monitoring and management, sustainable RF can generate positive outcomes for both society and natural ecosystems and help solve allocation conflicts with commercial fisheries and conservation.

Fisheries Research↗

USGS2020

Small mammals and ungulates respond to and interact with revegetation processes following dam removal

Terrestrial wildlife communities are often overlooked as components of ecosystem restoration following dam removal. However, a diverse mammalian fauna colonizes habitat on dewatered reservoirs and may influence restoration processes. We studied mammalian colonization and ungulate herbivory from 2014 to 2018 following the removal of two large dams on the Elwha River in Washington, USA. Specifically, we examined (1) small mammal colonization and (2) Roosevelt elk ( Cervus elaphus roosevelti ) and Columbian black-tailed deer ( Odocoileus hemionus columbianus ) distribution and browsing pressure in association with revegetation efforts. We live-trapped small mammals on two former reservoir beds and monitored deer and elk use by conducting pellet group counts and quantifying ungulate herbivory at plots throughout the former reservoir beds and an adjacent reference site. We found that the proportion of deciduous riparian species on plots best predicted occupancy for mice, shrews, and voles. Small mammal species diversity was best explained by the proportion of logs and conifers on study plots. Roosevelt elk presence and browsing intensity on willows ( Salix spp.) and black cottonwood ( Populus balsamifera ssp. trichocarpa ) varied both spatially and temporally, affecting the stature and potentially the growth trajectories of these species. Early seral restoration of these terrestrial habitats has included the presence of a diversity of granivores, insectivores, and herbivores, with elk demonstrating the strongest influence over portions of the study area. Small mammal colonization complements revegetation succession and demonstrates restoration of ecological processes, while large ungulates may be playing a more substantial role in shaping revegetation.

Washington↗

USGS2021

Mammal species composition and habitat associations in a commercial forest and mixed-plantation landscape

Commercial forest plantations of fast-growing species have been established globally to meet increasing demands for timber, pulpwood, and other wood products. Industrial plantations may contribute to tropical forest conservation by reducing exploitation of primary and secondary natural forests. Whether such plantations can support critical elements of biodiversity, including provision of habitat and movement corridors for species of conservation concern, is an important question in Southeast Asia. Our objectives were to investigate relationships between habitat gradients and community attributes of medium-sized to large mammals in a mixed plantation mosaic in Bengkoka Peninsula, Sabah, East Malaysia. Data on mammals were collected using 59 remote camera stations deployed for a minimum of 21 days (24-hour sampling occasions) in three major land-use types: natural forest, Acacia plantations, and non- Acacia plantations (oil palm, rubber, young Eucalyptus pellita ). We used sample-based rarefaction to evaluate variation in species richness with land use. We used generalized linear models and ordination analyses to evaluate whether variation in mammal detections and species composition was associated with habitat gradients. We recorded >22 mammal species over 1572 sampling occasions. Natural forest area was positively associated with mammal species richness and detections of threatened mammals. Overall detections of mammals increased with decreasing elevation, but decreased within, and close to, Acacia plantations. Detections of threatened mammals increased with greater proportions of natural forest and Acacia and increasing proximity to roads. Sample-based rarefaction indicated that species richness of mammals in Acacia and natural forest was considerably higher than observed. Both natural forest and Acacia plantations shared similar values for species richness and diversity, but non- Acacia plantations scored lower in both metrics. Mammal species composition differed among different types of land use. Smaller generalists used non- Acacia plantation forests. A variety of other mammals including some threatened species used natural forest, Acacia , or a combination of the two. Acacia plantations possess attributes supporting a diversity of mammal species, including those we defined as threatened based on IUCN criteria. However, this is likely a function of the habitat mosaic with natural forest in the study area and the mangrove forests on the fringes of the peninsula serving as refuges of mammal diversity. Retention and restoration of natural and mangrove forests may therefore enhance the conservation potential of industrial Acacia plantations. Additionally, controlled road access in conjunction with anti-poaching operations and strengthening public awareness are essential to reduce the threat of overexploitation.

Forest Ecology and Management↗

USGS2021

Pollinator communities vary with vegetation structure and time since management within regenerating timber harvests of the Central Appalachian Mountains

Native pollinator populations across the United States are increasingly threatened by a multitude of ecological stressors. Although the drivers behind pollinator population declines are varied, habitat loss/degradation remains one of the most important threats. Forested landscapes, where the impacts of habitat loss/degradation are minimized, are known to support robust pollinator populations in eastern North America. Within heavily forested landscapes, timber management is already implemented as a means for improving forest health and enhancing wildlife habitat, however, little is known regarding the characteristics within regenerating timber harvests that affect forest pollinator populations. In 2018-19, we monitored insect pollinators in 143 regenerating (≤ 9 growing seasons post-harvest) timber harvest sites across Pennsylvania. During 1,129 survey events, we observed over 9,100 bees and butterflies, 220 blooming plant taxa, and collected over 2,200 pollinator specimens. Bee and butterfly abundance were positively associated with season-wide floral abundance and negatively associated with dense vegetation that inhibits the growth of understory floral resources. Particularly in late summer, few pollinators were observed in stands > 6 years post-harvest, with models predicting five times more bees in 1-year-old harvests than in 9-year-old harvests. Pollinator species diversity was positively associated with floral diversity and percent forb cover, and negatively associated with percent tall (>1m) sapling cover. These results suggest that regenerating timber harvests promote abundant and diverse pollinator communities in the Appalachian Mountains, though pollinator abundance declined quickly as woody stems regenerated. Ultimately, our findings contribute to a growing body of literature suggesting that dynamic forest management producing an even mix of age classes would benefit forest pollinator populations in the Central Appalachian Mountains.

Pennsylvania↗

USGS2019

Field-level characteristics influence wild bee functional guilds on public lands managed for conservation

Throughout the Midwestern US, many public lands set aside for conservation engage in management activities (e.g., agriculture) that may act as stressors on wild bee populations. Several studies have investigated how wild bees respond to large-scale agriculture production; however, there has been limited assessment of how wild bees may be impacted by agricultural activity on public lands or how local variables may influence bee communities in these same areas. In this study, we assessed the abundance and richness of wild bee floral and nesting guilds at 30 agricultural field margins located on five Conservation Areas in Missouri. Generally, regardless of guild, bee abundance and richness was greater in field margins with more floral diversity and taller vegetation. Bee guilds responded negatively to agricultural production in Conservation Areas with fewer soil- and cavity-nesting bees collected in margins adjacent to annually cropped fields. Although fewer diet specialists were collected, specialist bee abundance and richness was greater in margins near fields that were uncropped (i.e., vegetated, but not row-cropped) during the previous year. Overall, the percentage of trees and shrubs within 800 m of study fields (i.e., “woodland”) was negatively associated with abundance and richness of bees, but specifically, reduced richness of soil-nesters and diet specialists. Our findings indicate agricultural management activities on public lands may lead to decreased abundance and richness of wild bee guilds. If public lands are to be managed for species diversity, including wild bees, maintaining diverse plant communities with taller vegetation (>100 cm) near cultivated fields and/or modifying agricultural production practices on public lands may greatly improve the conservation of local bee communities.

Global Ecology and Conservation↗

USGS2017

Chemistry of diagenetic features analyzed by ChemCam at Pahrump Hills, Gale crater, Mars

The Curiosity rover's campaign at Pahrump Hills provides the first analyses of lower Mount Sharp strata. Here we report ChemCam elemental composition of a diverse assemblage of post-depositional features embedded in, or cross-cutting, the host rock. ChemCam results demonstrate their compositional diversity, especially compared to the surrounding host rock: (i) Dendritic aggregates and relief enhanced features, characterized by a magnesium enhancement and sulfur detection, and interpreted as Mg-sulfates; (ii) A localized observation that displays iron enrichment associated with sulfur, interpreted as Fe-sulfate; (iii) Dark raised ridges with varying Mg- and Ca-enriched compositions compared to host rock; (iv) Several dark-toned veins with calcium enhancement associated with fluorine detection, interpreted as fluorite veins. (v) Light-toned veins with enhanced calcium associated with sulfur detection, and interpreted as Ca-sulfates. The diversity of the Pahrump Hills diagenetic assemblage suggests a complex post-depositional history for fine-grained sediments for which the origin has been interpreted as fluvial and lacustrine. Assessment of the spatial and relative temporal distribution of these features shows that the Mg-sulfate features are predominant in the lower part of the section, suggesting local modification of the sediments by early diagenetic fluids. In contrast, light-toned Ca-sulfate veins occur in the whole section and cross-cut all other features. A relatively late stage shift in geochemical conditions could explain this observation. The Pahrump Hills diagenetic features have no equivalent compared to targets analyzed in other locations at Gale crater. Only the light-toned Ca-sulfate veins are present elsewhere, along Curiosity's path, suggesting they formed through a common late-stage process that occurred at over a broad area.

Icarus↗

USGS2011

Genetic characterisation of Toxoplasma gondii in wildlife from North America revealed widespread and high prevalence of the fourth clonal type

Little is known of the genetic diversity of Toxoplasma gondii circulating in wildlife. In the present study wild animals, from the USA were examined for T. gondii infection. Tissues of naturally exposed animals were bioassayed in mice for isolation of viable parasites. Viable T. gondii was isolated from 31 animals including, to our knowledge for the first time, from a bald eagle ( Haliaeetus leucocephalus ), five gray wolves ( Canis lupus ), a woodrat ( Neotoma micropus) , and five Arctic foxes (Alopex lagopus) . Additionally, 66 T. gondii isolates obtained previously, but not genetically characterised, were revived in mice. Toxoplasma gondii DNA isolated from these 97 samples (31 + 66) was characterised using 11 PCR-restriction fragment length polymorphism (RFLP) markers (SAG1, 5′- and 3′-SAG2, alt.SAG2, SAG3, BTUB, GRA6, c22–8, c29–2, L358, PK1 and Apico). A total of 95 isolates were successfully genotyped. In addition to clonal Types II, and III, 12 different genotypes were found. These genotype data were combined with 74 T. gondii isolates previously characterised from wildlife from North America and a composite data set of 169 isolates comprised 22 genotypes, including clonal Types II, III and 20 atypical genotypes. Phylogenetic network analysis showed limited diversity with dominance of a recently designated fourth clonal type (Type 12) in North America, followed by the Type II and III lineages. These three major lineages together accounted for 85% of strains in North America. The Type 12 lineage includes previously identified Type A and X strains from sea otters. This study revealed that the Type 12 lineage accounts for 46.7% (79/169) of isolates and is dominant in wildlife of North America. No clonal Type I strain was identified among these wildlife isolates. These results suggest that T. gondii strains in wildlife from North America have limited diversity, with the occurrence of only a few major clonal types.

International Journal for Parasitology↗

USGS2016

Ectoparasitism on deep-sea fishes in the western North Atlantic: In situ observations from ROV surveys

A complete understanding of how parasites influence marine ecosystem functioning requires characterizing a broad range of parasite-host interactions while determining the effects of parasitism in a variety of habitats. In deep-sea fishes, the prevalence of parasitism remains poorly understood. Knowledge of ectoparasitism, in particular, is limited because collection methods often cause dislodgment of ectoparasites from their hosts. High-definition video collected during 43 remotely operated vehicle surveys (2013–2014) provided the opportunity to examine ectoparasitism on fishes across habitats (open slope, canyon, seamount, cold seep) and depths (494–4689 m) off the northeastern U.S., while providing high-resolution images and valuable observations of fish behavior. Only 9% (n = 125 individuals) of all observed fishes (25 species) were confirmed with ectoparasites, but higher percentages (&sim;33%) were observed for some of the most abundant fish species (e.g., Antimora rostrata) . Ectoparasites included two copepod families (Lernaeopodidae, Sphyriidae) that infected four host species, two isopod families (Cymothoidae, Aegidae) that infected three host species, and one isopod family (Gnathiidae) that infected 19 host species. Hyperparasitism was also observed. As host diversity declined with depth, ectoparasite diversity declined; only gnathiids were observed at depths down to 3260 m. Thus, gnathiids appear to be the most successful group to infect a diversity of fishes across a broad depth range in the deep sea. For three dominant fishes ( A. rostrata , Nezumia bairdii , Synaphobranchus spp.), the abundance and intensity of ectoparasitism peaked in different depths and habitats depending on the host species examined. Notably, gnathiid infections were most intense on A. rostrata , particularly in submarine canyons, suggesting that these habitats may increase ectoparasite infections. Although ectoparasitism is often overlooked in deep-sea benthic communities, our results demonstrate that it occurs widely across a variety of habitats, depths, and locations and is a significant component of deep-sea biodiversity.

New England Seamount Chain↗