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Data management and interactive visualizations for the evolving marine biodiversity observation network

Assessing the current state of and predicting change in the ocean’s biological and ecosystem resources requires observations and research to safeguard these valuable public assets. The Marine Biodiversity Observation Network (MBON) partnered with the Global Ocean Observing System Biology and Ecosystems Panel and the Ocean Biodiversity Information System to address these needs through collaboration, data standardization, and data sharing. Here, we describe the generalized MBON data processing flow, which includes several steps to ensure that data are findable, accessible, interoperable, and reusable. By following this flow, data collected and managed by MBON have contributed to our understanding of the Global Ocean Observing System Essential Ocean Variables and demonstrated the value of web-based, interactive tools to explore and better understand environmental change. Although the MBON’s generalized data processing flow is already in practice, work remains in building ontologies for biological concepts, improving processing scripts for data standardization, and speeding up the data collection-to-sharing timeframe.

Oceanography↗

Mapping the global land surface using 1 km AVHRR data

The scientific requirements for mapping the global land surface using 1 km advanced very high resolution radiometer (AVHRR) data have been set forth by the U.S. Global Change Research Program; the International Geosphere Biosphere Programme (IGBP); The United Nations; the National Oceanic and Atmospheric Administration (NOAA); the Committee on Earth Observations Satellites; and the National Aeronautics and Space Administration (NASA) mission to planet Earth (MTPE) program. Mapping the global land surface using 1 km AVHRR data is an international effort to acquire, archive, process, and distribute 1 km AVHRR data to meet the needs of the international science community. A network of AVHRR receiving stations, along with data recorded by NOAA, has been acquiring daily global land coverage since April 1, 1992. A data set of over 70,000 AVHRR images is archived and distributed by the United States Geological Survey (USGS) EROS Data Center, and the European Space Agency. Under the guidance of the IGBP, processing standards have been developed for calibration, atmospheric correction, geometric registration, and the production of global 10-day maximum normalized difference vegetation index (NDVI) composites. The major uses of the composites are for the study of surface vegetation condition, mapping land cover, and deriving biophysical characteristics of terrestrial ecosystems. A time-series of 54 10-day global vegetation index composites for the period of April 1, 1992 through September 1993 has been produced. The production of a time-series of 33 10-day global vegetation index composites using NOAA-14 data for the period of February 1, 1995 through December 31, 1995 is underway. The data products are available from the USGS, in cooperation with NASA's MTPE program and other international organizations.

Space Technology↗

Modeling habitat distribution from organism occurrences and environmental data: Case study using anemonefishes and their sea anemone hosts

We demonstrate the KGSMapper (Kansas Geological Survey Mapper), a straightforward, web-based biogeographic tool that uses environmental conditions of places where members of a taxon are known to occur to find other places containing suitable habitat for them. Using occurrence data for anemonefishes or their host sea anemones, and data for environmental parameters, we generated maps of suitable habitat for the organisms. The fact that the fishes are obligate symbionts of the anemones allowed us to validate the KGSMapper output: we were able to compare the inferred occurrence of the organism to that of the actual occurrence of its symbiont. Characterizing suitable habitat for these organisms in the Indo-West Pacific, the region where they naturally occur, can be used to guide conservation efforts, field work, etc.; defining suitable habitat for them in the Atlantic and eastern Pacific is relevant to identifying areas vulnerable to biological invasions. We advocate distinguishing between these 2 sorts of model output, terming the former maps of realized habitat and the latter maps of potential habitat. Creation of a niche model requires adding biotic data to the environmental data used for habitat maps: we included data on fish occurrences to infer anemone distribution and vice versa. Altering the selection of environmental variables allowed us to investigate which variables may exert the most influence on organism distribution. Adding variables does not necessarily improve precision of the model output. KGSMapper output distinguishes areas that fall within 1 standard deviation (SD) of the mean environmental variable values for places where members of the taxon occur, within 2 SD, and within the entire range of values; eliminating outliers or data known to be imprecise or inaccurate improved output precision mainly in the 2 SD range and beyond. Thus, KGSMapper is robust in the face of questionable data, offering the user a way to recognize and clean such data. It also functions well with sparse datasets. These features make it useful for biogeographic meta-analyses with the diverse, distributed datasets that are typical for marine organisms lacking direct commercial value. ?? Inter-Research 2006.

Marine Ecology Progress Series↗

Hydrogeologic data for the Shetucket River basin, Connecticut

This report presents hydrologic and geologic data collected by the U.S. Geological Survey during an investigation of water resources in the Shetucket River basin of Connecticut in cooperation with the Connecticut Water Resources Commission. The Shetucket River basin occupies about 507 square miles in the eastern part of the State, including the towns of Andover, Ashford, Chaplin, Coventry, Mansfield, Scotland, Sprague, Windham, and Willington, and parts of Bolton, Canterbury, Columbia, Eastford, Ellington, Franklin, Lebanon, Lisbon, Hampton, Hebron, Norwich, Pomfret, Stafford, Tolland, Union, Vernon, and Woodstock. A companion interpretive report, Connecticut Water Resources Bulletin ll, (Thomas, and others, 1967), evaluates the water resources of the basin. The data on the following pages serve to document and supplement that report and should be especially useful in planning the development of water resources at specific localities. Data were collected as part of this investigation during the period July 1962 through December 1964. Streamflow records from continuous-record gaging stations in the basin for this period have been published annually along with data from other parts of the State in a series of U.S. Geological Survey reports entitled "Surface Water Records of Connecticut." Water-level measurements in wells throughout the State from 1960 through 1964, including those made as part of this investigation, are published in Connecticut Water Resources Bulletin 7 (Meikle and Baker, 1965). Most other data collected during this investigation are tabulated on the following pages. Included are some well records and chemical analyses of water samples collected prior to July 1962 and not previously published. The locations of sites at which data were collected are shown on plate A in the pocket at the back of the report. Plate A includes the locations of 98 sites where 2 to 6 miscellaneous measurements of streamflow were made during 1963 and 13 other sites where continuous records are maintained. Data for these sites have already been published in "Surface Water Records of Connecticut" and are not repeated here. Data presented~ unless otherwise noted, were collected by U.S. Geological Survey personnel.

Connecticut↗

Towards integration of GLAS data into a national fuels mapping program

Comprehensive canopy structure and fuel data are critical for understanding and modeling wildland fire. The LANDFIRE project produces such data nationwide based on a collection of field observations, Landsat imagery, and other geospatial data. Where field data are not available, alternate strategies are being investigated. In this study, vegetation structure data available from GLAS were used to fill this data gap for the Yukon Flats Ecoregion of interior Alaska. The GLAS-derived structure and fuel layers and the original LANDFIRE layers were subsequently used as inputs into a fire behavior model to determine what effect the revised inputs would have on the model outputs. The outputs showed that inclusion of the GLAS data enabled better landscape-level characterization of vegetation structure and therefore enabled a broader wildland fire modeling capability. The results of this work underscore how GLAS data can be incorporated into LANDFIRE canopy structure and fuel mapping.

Alaska↗

Evaluation of the ground-water resources of coastal Georgia: preliminary report of the data available as of July 1983

A compilation of ground-water data that have been collected for nearly 100 years in the coastal area of Georgia is presented in this report. The compilation of pertinent data indicates what information is available for use in the evaluation of the ground-water resources of the 13 counties of coastal Georgia. Also included in this report is a fairly complete discussion of previous and ongoing investigations and monitoring networks, and an extensive list of references. Maps at 1:24,000 and 1:1,000,000 scales contain well locations and identifiers for all wells in the Ground Water Site Inventory (GWSI) data base of the National Water Data Storage and retrieval System (WATSTORE). Tabular summaries of selected site information from GWSI, including well identifiers and names, latitude-longitude location, depth of well, altitude of land surface, and use of water are presented. Water-use data from the National Water Use Data System, and water use for irrigation from the University of Georgia, Department of Agriculture survey, also are tabulated. Also included are pertinent information on geophysical surveys and data obtained, and proposed project activities, particularly test-monitor well drilling. The data in this report were collected and compiled as part of the cooperative activities between the U.S. Geological Survey and other agencies.

Georgia↗

User's guide and metadata for WestuRe: U.S. Pacific Coast estuary/watershed data and R tools

Overview There are about 350 estuaries along the U.S. Pacific Coast (U.S. Fish andWildlife 2011). Basic descriptive data for these estuaries, such as their size and watershed area, are important for coastal-scale research and conservation planning. However, this information is spread among many sources, making it difficult to find and standardize. The goal of the WestuRe Project is to provide a framework to: (1) make general descriptive data for estuaries and their watersheds more accessible, and (2) provide tools to make analyzing and visualizing these data easier. The WestuRe download includes data describing U.S. Pacific Coast estuaries and their corresponding watersheds from northern Washington (including the region located along the Strait of Juan de Fuca that goes from Port Townsend to Cape Flattery, 48.383°N) to southern California (Tijuana Estuary, 32.557°N), excluding Puget Sound proper and coastal islands (Fig. 1). The WestuRe data currently include shapefiles of estuary and watershed polygons as well as CSV files summarizing geomorphological and climate data (Fig. 2, Section 2). The WestuRe tools help users extract and view relevant data using the statistical program R and Google Earth (Fig. 3, Section 3). Potential applications of the data include: Describing and comparing estuaries and watersheds at the landscape scale Identifying relationships between estuary/watershed variables Incorporating estuary/watershed attributes in models to predict species and habitat distributions Classifying estuaries according to morphology, climate, and habitat (Lee and Brown 2009)

California, Oregon, Washington↗

Creating potentiometric surfaces from combined water well and oil well data in the midcontinent of the United States

For years, hydrologists have defined potentiometric surfaces using measured hydraulic-head values in water wells from aquifers. Down-dip, the oil and gas industry is also interested in the formation pressures of many of the same geologic formations for the purpose of hydrocarbon recovery. In oil and gas exploration, drillstem tests (DSTs) provide the formation pressure for a given depth interval in a well. These DST measurements can be used to calculate hydraulic-head values in deep hydrocarbon-bearing formations in areas where water wells do not exist. Unlike hydraulic-head measurements in water wells, which have a low number of problematic data points (outliers), only a small subset of the DST data measure true formation pressures. Using 3D imaging capabilities to view and clean the data, we have developed a process to estimate potentiometric surfaces from erratic DST data sets of hydrocarbon-bearing formations in the midcontinent of the U.S. The analysis indicates that the potentiometric surface is more readily defined through human interpretation of the chaotic DST data sets rather than through the application of filtering and geostatistical analysis. The data are viewed as a series of narrow, 400-mile-long swaths and a 2D viewer is used to select a subset of hydraulic-head values that represent the potentiometric surface. The user-selected subsets for each swath are then combined into one data set for each formation. These data are then joined with the hydraulic-head values from water wells to define the 3D potentiometric surfaces. The final product is an interactive, 3D digital display containing: (1) the subsurface structure of the formation, (2) the cluster of DST-derived hydraulic head values, (3) the user-selected subset of hydraulic-head values that define the potentiometric surface, (4) the hydraulic-head measurements from the corresponding shallow aquifer, (5) the resulting potentiometric surface encompassing both oil and gas and water wells, and (6) the land surface elevation of the region. Examples from the midcontinent of the United States, specifically Kansas, Oklahoma, and parts of adjacent states illustrate the process.

Book↗

The collection of clear-water contraction and abutment scour data at selected bridge sites in the coastal plain and piedmont of South Carolina

Clear-water contraction and abutment scour data were collected at 128 bridge sites in South Carolina. In the sandy soils of the Coastal Plain, clear-water-scour data were collected at 63 sites (scour depths ranged from 0.4 to 7.2 meters.) In the clayey soils of the Piedmont, clear-water-scour data were collected at 47 sites (scour depths ranged from 0 to 1.4 meters.) In the sandy, clayey soils of the Piedmont, clear-water-scour data were collected at 18 sites (scour depths ranged from 0.9 to 5.5 meters.) The field data are to be compiled into a data base that will include bridge age; basin, soil and hydraulic characteristics; and theoretical scour data. The data are planned to be statistically analyzed for significant relations that may help explain and (or) predict maximum scour depths at bridges in South Carolina.

South Carolina↗

Accuracy assessment/validation methodology and results of 2010–11 land-cover/land-use data for Pools 13, 26, La Grange, and Open River South, Upper Mississippi River System

Introduction/Background The U.S. Geological Survey (USGS)-Upper Midwest Environmental Sciences Center (UMESC) was responsible for development of several land cover/land use (LCU) systemic datasets of the Upper Mississippi River System (UMRS). These efforts (1989 and 2000) were funded by the U.S. Army Corps of Engineers’ Upper Mississippi River Restoration Program (UMRR) Long Term Resource Monitoring (LTRM) element. Development of systemic datasets includes the acquisition, processing, and serving of high-resolution aerial photography and land cover/land use spatial datasets ( http://www.umesc.usgs.gov/data_library/land_cover_use/land_cover_use_data.html ). In 2008, the UMRR reached a collaborative agreement with the U.S. Fish and Wildlife Service-Region 3 to collect high-resolution digital imagery of the entire UMRS floodplain during 2010–11 for LTRM. The UMESC helped acquire, process, and serve this imagery, as well as produce and serve the 2010–11 LCU systemic dataset of the UMRS floodplain. Digital imagery for Pools 13, 26, La Grange, and Open River South was collected using an Applanix DSS 439 digital sensor system with a 40 millimeter lens and Color Infrared (CIR) filter. The imagery was collected at a resolution of 20 centimeters/pixel (8 inches/pixel) for Pool 13 and 40 centimeters/pixel (16 inches/pixel) for Pools 26, Open River South, and La Grange. All imagery was projected to Universal Transverse Mercator (UTM) Zone 15, North American Datum of 1983 (NAD 83). The General Wetland Vegetation Classification (GWVC) system used for mapping is hierarchical, and its 31 classes can be collapsed into broader categories using either a 15- or 7-class level. While the 1989 and 2000 LCU systemic datasets have not gone through a traditional thematic accuracy assessment (AA) in the past, nor have they undergone a validation analysis, the end products are of high quality. For each systemic dataset produced (1989, 2000, 2010–11), extensive field reconnaissance is performed before photointerpretation. The intent of this field reconnaissance is to learn, test, and verify image signatures as they relate to vegetation types. Questionable areas on the imagery are visited, and the plants or land features observed in the area are recorded for reference. This procedure verifies vegetation signatures on the imagery with those on the ground. In addition, once the photointerpretation is complete, the final LCU dataset undergoes extensive quality assurance/quality control to ensure the imagery is mapped correctly. Since the 2000 LCU systemic dataset was developed, there has been a growing interest in completing thematic AAs for the LTRM LCU spatial datasets. The objective of an AA is to measure the probability that a particular location has been assigned its correct vegetation class. An AA estimates thematic (map class) errors in the data, giving users information needed to determine data suitability for a particular application. At the same time, data producers are able to learn more about the nature of errors in the data. Thus, the two attributes of an AA are “producers’ accuracy,” which is the probability that an AA point has been mapped correctly (also referred to as an error of omission); and “users’ accuracy,” which is the probability that the map actually represents what was found on the ground (also referred to as error of commission). Producers’ and users’ accuracies can be obtained from the same set of data by using different analyses. Accuracy assessment is an extensive effort that requires seasonal field personnel and equipment, data entry, analyses, and post processing—tasks that are costly and time consuming. The geospatial team at the UMESC has suggested a validation process for understanding the accuracy of the spatial datasets, which will be tested on at least some areas of the UMRS. Validation is not a true verification of map-class type in the field; however, it can provide the user of the map with useful information that is similar to a field AA. Similar to an AA, validation involves generating random points based on the total area for each map class. However, instead of collecting field data, two or three individuals not involved with the photo-interpretative mapping separately review each of the points onscreen and record a best-fit vegetation type(s) for each site. Once the individual analyses are complete, results are joined together and a comparative analysis is performed. The objective of this initial analysis is to identify areas where the validation results were in agreement (matches) and areas where validation results were in disagreement (mismatches). The two or three individuals then perform an analysis, looking at each mismatched site, and agree upon a final validation class. (If two vegetation types at a specific site appear to be equally prevalent, the validation team is permitted to assign the site two best-fit vegetation types.) Following the validation team’s comparative analysis of vegetation assignments, the data are entered into a database and compared to the mappers’ vegetation assignments. Agreements and disagreements between the map and validation classes are identified, and a contingency table is produced. This document presents the AA processes/results for Pools 13 and La Grange, as well as the validation process/results for Pools 13 and 26 and Open River South.

Iowa, Illinois, Minnesota, Missouri, Wisconsin↗

Regional forest land cover characterisation using medium spatial resolution satellite data

Increasing demands on forest resources require comprehensive, consistent and up-to-date information on those resources at spatial scales appropriate for management decision-making and for scientific analysis. While such information can be derived using coarse spatial resolution satellite data (e.g. Tucker et al. 1984; Zhu and Evans 1994; Cihlar et al. 1996; Cihlar et al., Chapter 12), many regional applications require more spatial and thematic details than can be derived by using coarse resolution imagery. High spatial resolution satellite data such as IKONOS and Quick Bird images (Aplin et al. 1997), though usable for deriving detailed forest information (Culvenor, Chapter 9), are currently not feasible for wall-to-wall regional applications because of extremely high data cost, huge data volume, and lack of contiguous coverage over large areas. Forest studies over large areas have often been accomplished using data acquired by intermediate spatial resolution sensor systems, including the Multi-Spectral Scanner (MSS), Thematic Mapper (TM) and the Enhanced Thematic Mapper Plus (ETM+) of Landsat, the High Resolution Visible (HRV) of the Systeme Pour l'Observation de la Terre (SPOT), and the Linear Image Self-Scanner (LISS) of the Indian Remote Sensing satellite. These sensor systems are more appropriate for regional applications because they can routinely produce spatially contiguous data over large areas at relatively low cost, and can be used to derive a host of forest attributes (e.g. Cohen et al. 1995; Kimes et al. 1999; Cohen et al. 2001; Huang et al. 2001; Sugumaran 2001). Of the above intermediate spatial resolution satellites, Landsat is perhaps the most widely used in various types of land remote sensing applications, in part because it has provided more extensive spatial and temporal coverage of the globe than any other intermediate resolution satellite. Spatially contiguous Landsat data have been developed for many regions of the globe (e.g. Lunetta and Sturdevant 1993; Fuller et al. 1994b; Skole et al. 1997), and a circa 1990 Landsat image data set covering the entire land area of the globe has also been developed recently (Jones and Smith 2001). An acquisition strategy aimed at acquiring at least one cloud free image per year for the entire land area of the globe has been initiated for Landsat-7 (Arvidson et al. 2001). This will probably ensure the continued dominance of Landsat in the near future.

Book chapter↗

3-D Modeling of the Duluth Complex from geophysical data

The Mesoproterozoic Duluth Complex in northeastern Minnesota is one of the major plutonic components of the Midcontinent Rift System and hosts a variety of copper-nickel sulfide and platinum-group element deposits. The Duluth Complex is composed of a series of individual mafic and felsic intrusions emplaced 1110-1098 Ma within Paleoproterozoic sedimentary rocks of the Animikie basin and volcanic flows of the Midcontinent Rift. Prior work has included 2-D modeling and qualitative geologic interpretations of gravity and magnetic data (e.g., Chandler, 1990; Chandler and Ferderer, 1989), much of which is still preliminary (V. Chandler, written commun., 2020). Three-dimensional modeling has been limited, with only one 3-D model created using Bouguer gravity data constrained by seismic-reflection interpretations as part of a PhD thesis (Allen, 1994). Given the complex geology of the area, 3-D modeling is useful for providing a complete picture of the variable densities, susceptibilities, and electrical resistivities throughout the Duluth Complex and associated volcanic rocks as well as their depth extent beneath sedimentary cover. Models of these geophysical properties at depth enable more accurate geologic mapping in the subsurface which can lead to an improved understanding of the formation history of the Duluth Complex. In this study, we use aeromagnetic data acquired between 1979-1991 (Chandler, 2007), Bouguer gravity data collected since 1950 (Chandler and Lively, 2019), and magnetotelluric data collected in 2019 to create new 2-D and 3-D geophysical models of the Duluth Complex constrained by seismic reflection, geologic, and rock property data. An inversion of the Bouguer gravity data for thickness of the Duluth Complex using constant densities of 3110 kg/m3 and 2670 kg/m3 for the Duluth Complex and surrounding crustal rocks, respectively, results in thicknesses ranging from ~3-28 km for the Duluth Complex and related intrusions and volcanic rocks (Figure 1A). A 3-D model of the magnetotelluric data reveals low resistivity anomalies at ~5-10 km depth below the northern margin of the Duluth Complex and below the Greenwood Lake intrusion (Figure 1B). We expect to encounter low resistivities at depth associated with the Paleoproterozoic Animikie basin, which makes up the floor of the Duluth Complex, and therefore interpret these anomalies as either the base of the complex or as fragments of Animikie sediments interfingered with igneous intrusive rocks. Finally, 3-D voxel models of density and susceptibility illuminate the subsurface distribution of rock properties below the Duluth Complex which, in combination with resistivity and thickness models, can be used to create a 3-D geologic map of this area.

Minnesota↗

A comprehensive plan for in-water sea turtle data collection in the US Gulf of Mexico

The Deepwater Horizon Open Ocean Trustee Implementation Group (OO TIG) released a Final Open Ocean Restoration Plan 2 in 2019, which included a project titled Developing a Gulf-wide Comprehensive Plan for In-water Sea Turtle Data Collection. This document, A Comprehensive Plan for In-water Sea Turtle Data Collection in the US Gulf of Mexico (Plan), is the culmination of that OO TIG project. This Plan serves as the OO TIG project’s technical report as well as a framework for a biologically and statistically-sound plan to support coordinated in-water sea turtle data collection in the United States (US) Gulf of Mexico (GoM) to determine sea turtle abundance and population trends. The purpose of this Plan is to act as a guide for collecting biologically and statistically robust, in-water sea turtle data in a comprehensive, coordinated, and standardized fashion in the US GoM. Several sea turtle in-water monitoring efforts are underway in the GoM; however, additional coordination and standardization of these efforts will benefit current restoration and recovery objectives. These efforts will aid in restoration project design, assess long-term effectiveness of restoration activities, and create abundance and distribution baselines across the GoM. This Plan provides guidance for researchers investigating sea turtle abundance and demographic questions, as well as for management agencies and restoration planners. A Steering Committee (SC) was assembled to develop this Plan and to recommend a coordinated approach to the formulation of an improved understanding of sea turtle population baselines in the GoM, from which determination of large-scale population changes, effects of specific threats (e.g., oil spills, anthropogenic hazards), and effects of changes in ocean conditions (e.g., climate change) can later be evaluated. In crafting this guidance, the SC considered species distribution and life history characteristics, spatial and logistical considerations, level of effort required to detect trends, methods available and the pros and cons of each, associated assumptions and biases with suggested monitoring methods, and standardization of data collection. Given the current level of data available, the SC has recommended species monitoring in two main phases in neritic and oceanic waters, with additional recommended sampling for surface pelagic drift communities. The two phases in this Plan focus on 1) monitoring a limited number of sites in the first 5 to 8 years, followed by 2) a refined monitoring design. To support implementation of this Plan, the SC also considered broader programmatic needs, including supplemental data collection, program and data management, potential international partnerships, program expansion, and applications including future technology.

Alabama, Florida, Louisiana, Mississippi, Texas↗

Evaluation of data collected by Guam Division of Aquatic and Wildlife Resources during population establishment and monitoring of ko'ko' (Hypotaenidia owstoni) on Rota, Commonwealth of the Northern Mariana Islands, and wildlife monitoring datasets on Cocos Island and Guam

Efforts to recover the critically endangered ko’ko’ (Guam rail, Hypotaenidia owstoni) through establishing an experimental population on the island of Rota in the Commonwealth of the Northern Mariana Islands have been ongoing for three decades. The U.S. Geological Survey collaborated with the Guam Division of Aquatic and Wildlife Resources and the Government of Guam to evaluate whether objectives for three projects can be met with current protocols. The aim of this report was to evaluate existing data provided on (1) ko’ko’ population monitoring on Rota; (2) ko’ko’ population establishment on Rota; plus (3) evaluation of three wildlife monitoring datasets for ko’ko’ on Cocos Island, endangered pulattat (Mariana common moorhen, Gallinula chloropus guami) on Guam, and introduced ungulate species on Guam. Data sources included playback call surveys, point count surveys, release events and studbook information, telemetry of radio-marked birds, as well as landcover classes, storm events, and Oceanic Niño Index information to relate environmental factors to ko’ko’ persistence. Major findings were that reaching objectives was constrained by limited data availability and quality. Suggestions for future study include developing detailed protocols for surveys and data collection, standardizing training procedures for observers, improving data organization and archiving, using methods like distance sampling that account for imperfect detection, and collecting additional data on nests and prey resources to understand drivers of ko’ko’ density and survival. While the current data provide a preliminary assessment, improved sampling designs and consistent protocols are needed to fully address objectives related to the recovery of the ko’ko’. The report provides a roadmap for enhancing data collection and analysis to support management decisions and reach conservation translocation goals about this endangered species and related projects.

Guam, Mariana Islands↗

Methodology for compilation of previously published contour data showing the altitude of the base of Dakota Sandstone on the Colorado Plateau, Arizona, Colorado, New Mexico, and Utah

Structure contours and other geologic information from numerous published geologic maps were digitized and compiled into a digital dataset showing the configuration of a single stratigraphic datum, the base of the Dakota Sandstone and its equivalents across the Colorado Plateau. The principal maps compiled in digital form are a series of 1:250,000-scale 1 degree (°) × 2° quadrangle maps published by the U.S. Geological Survey, augmented by other geologic maps published at various map scales. The compiled digital dataset contains geologic map polygons of the Dakota Sandstone and regional stratigraphic equivalents, the location of faults and fold axes, structure contour lines that define the altitude of the base of the unit and bedding orientation data computed from the structure contour lines. This report provides the scientific rationale for compilation of these data and describes the compilation methodology for each of the data elements. This report provides an extended description of the data compilation in a companion U.S. Geological Survey digital data release of spatial data and attributes associated with the contoured surface and associated geologic data layers.

Arizona, Colorado, New Mexico, Utah↗

Comparison of 2002 Water Year and Historical Water-Quality Data, Upper Gunnison River Basin, Colorado

Introduction: Population growth and changes in land-use practices have the potential to affect water quality and quantity in the upper Gunnison River basin. In 1995, the U.S. Geological Survey (USGS), in cooperation with local sponsors, City of Gunnison, Colorado River Water Conservation District, Crested Butte South Metropolitan District, Gunnison County, Mount Crested Butte Water and Sanitation District, National Park Service, Town of Crested Butte, and Upper Gunnison River Water Conservancy District, established a water-quality monitoring program in the upper Gunnison River basin to characterize current water-quality conditions and to assess the effects of increased urban development and other land-use changes on water quality. The monitoring network has evolved into two groups of stations, stations that are considered as long term and stations that are rotational. The long-term stations are monitored to assist in defining temporal changes in water quality (how conditions have changed over time). The rotational stations are monitored to assist in the spatial definition of water-quality conditions (how conditions differ throughout the basin) and to address local and short term concerns. Another group of stations (rotational group 2) will be chosen and sampled beginning in water year 2004. Annual summaries of the water-quality data from the monitoring network provide a point of reference for discussions regarding water-quality sampling in the upper Gunnison River basin. This summary includes data collected during water year 2002. The introduction provides a map of the sampling locations, definitions of terms, and a one-page summary of selected water-quality conditions at the network stations. The remainder of the summary is organized around the data collected at individual stations. Data collected during water year 2002 are compared to historical data (data collected for this network since 1995), state water-quality standards, and federal water-quality guidelines. Data were collected during water year 2002 following USGS protocols (U.S. Geological Survey, variously dated).

Data Series↗

Chirp subbottom profile data collected in 2015 from the northern Chandeleur Islands, Louisiana

As part of the Barrier Island Evolution Research project, scientists from the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted a nearshore geophysical survey around the northern Chandeleur Islands, Louisiana, in September 2015. The objective of the project is to improve the understanding of barrier island geomorphic evolution, particularly storm-related depositional and erosional processes that shape the islands over annual to interannual time scales (1–5 years). Collecting geophysical data can help researchers identify relations between the geologic history of the islands and their present day morphology and sediment distribution. High-resolution geophysical data collected along this rapidly changing barrier island system can provide a unique time-series dataset to further the analyses and geomorphological interpretations of this and other coastal systems, improving our understanding of coastal response and evolution over medium-term time scales (months to years). Subbottom profile data were collected in September 2015 offshore of the northern Chandeleur Islands, during USGS Field Activity Number 2015-331-FA. Data products, including raw digital chirp subbottom data, processed subbottom profile images, survey trackline map, navigation files, geographic information system data files and formal Federal Geographic Data Committee metadata, and Field Activity Collection System and operation logs are available for download.

Louisiana↗

Water-quality and biologic data for the Blue River basin, Kansas City metropolitan area, Missouri and Kansas, October 2000 to October 2004

This report presents water-quality and biologic data collected in the Blue River Basin, metropolitan Kansas City, Missouri and Kansas, from October 2000 to October 2004. Data were collected in cooperation with the city of Kansas City, Missouri, Water Services Department as part of an ongoing study designed to characterize long-term water-quality trends in the basin and to provide data to support a strategy for combined sewer overflow control. These data include values of physical properties, fecal indicator bacteria densities, suspended sediment, and concentrations of major ions, nutrients, trace elements, organic wastewater compounds, and pharmaceutical compounds in base-flow and stormflow stream samples and bottom sediments. Six surface-water sites in the basin were sampled 13 times during base-flow conditions and during a minimum of 7 storms. Benthic macroinvertebrate communities are described at 10 sites in the basin and 1 site outside the basin. Water-column and bottom-sediment data from impounded reaches of Brush Creek are provided. Continuous specific conductance, pH, water-quality temperature, turbidity, and dissolved oxygen data are provided for two streams-the Blue River and Brush Creek. Sampling, analytical, and quality assurance methods used in data collection during the study also are described in the report.

Kansas, Missouri↗