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USGS2016

Uncertainty in tsunami sediment transport modeling

Erosion and deposition from tsunamis record information about tsunami hydrodynamics and size that can be interpreted to improve tsunami hazard assessment. We explore sources and methods for quantifying uncertainty in tsunami sediment transport modeling. Uncertainty varies with tsunami, study site, available input data, sediment grain size, and model. Although uncertainty has the potential to be large, published case studies indicate that both forward and inverse tsunami sediment transport models perform well enough to be useful for deciphering tsunami characteristics, including size, from deposits. New techniques for quantifying uncertainty, such as Ensemble Kalman Filtering inversion, and more rigorous reporting of uncertainties will advance the science of tsunami sediment transport modeling. Uncertainty may be decreased with additional laboratory studies that increase our understanding of the semi-empirical parameters and physics of tsunami sediment transport, standardized benchmark tests to assess model performance, and development of hybrid modeling approaches to exploit the strengths of forward and inverse models.

Journal of Disaster Research↗

USGS1978

Applications of the VLF induction method for studying some volcanic processes of Kilauea volcano, Hawaii

The very low-frequency (VLF) induction method has found exceptional utility in studying various volcanic processes of Kilauea volcano, Hawaii because: (1) significant anomalies result exclusively from ionically conductive magma or still-hot intrusions (> 800??C) and the attendant electrolytically conductive hot groundwater; (2) basalt flows forming the bulk of Kilauea have very high resistivities at shallow depths that result in low geologic noise levels and relatively deep depths of investigation (???100 m); and (3) the azimuths to two of the usable transmitters (NLK and NPM) are aligned favorably with most of the principal geologic features. Measurements of the tilt angle and ellipticity of the polarization ellipse of the magnetic field, using a simple, hand-held receiver, have been used to: (1) delineate the lateral extent of shallow, partially solidified lava lakes, active lava tubes, and recent intrusive dikes; (2) obtain an indication of the attitude of some recent dikes; (3) show that many eruptive fissures cool faster than their intrusive counterparts; (4) show that some fumarolic areas are underlain by shallow, highly altered, and conductive zones; and (5) provide control information for interpreting data obtained with other electrical techniques. Complementary measurements of scalar apparent resistivity and surface impedance phase, using a new attachment for the VLF receiver, have substantially increased the utility of VLF studies in Kilauea. They provide better lateral resolution of conductors and reduce the ambiguity in interpretation. Notwithstanding recent advances in theoretical modeling techniques, the excellent quality of some of the data warrants extension of interpretive techniques, particularly for quantitatively characterizing the configuration and conductivity of small-dimension bodies. These VLF induction methods should have wide application to studies of active volcanic regions in other parts of the world and could provide some insights into the workings of larger-scaled geothermal systems. ?? 1978.

Journal of Volcanology and Geothermal Research↗

USGS2013

The utility of atmospheric analyses for the mitigation of artifacts in InSAR

The numerical weather models (NWMs) developed by the meteorological community are able to provide accurate analyses of the current state of the atmosphere in addition to the predictions of the future state. To date, most attempts to apply the NWMs to estimate the refractivity of the atmosphere at the time of satellite synthetic aperture radar (SAR) data acquisitions have relied on predictive models. We test the hypothesis that performing a final assimilative routine, ingesting all available meteorological observations for the times of SAR acquisitions, and generating customized analyses of the atmosphere at those times will better mitigate atmospheric artifacts in differential interferograms. We find that, for our study area around Mount St. Helens (Amboy, Washington, USA), this approach is unable to model the refractive changes and provides no mean benefit for interferogram analysis. The performance is improved slightly by ingesting atmospheric delay estimates derived from the limited local GPS network; however, the addition of water vapor products from the GOES satellites reduces the quality of the corrections. We interpret our results to indicate that, even with this advanced approach, NWMs are not a reliable mitigation technique for regions such as Mount St. Helens with highly variable moisture fields and complex topography and atmospheric dynamics. It is possible, however, that the addition of more spatially dense meteorological data to constrain the analyses might significantly improve the performance of weather modeling of atmospheric artifacts in satellite radar interferograms.

Journal of Geophysical Research B: Solid Earth↗

USGS2008

Distribution of geogenic arsenic in hydrologic systems: Controls and challenges

The presence of elevated concentration of arsenic (As) in natural hydrologic systems is regarded as the most formidable environmental crisis in the contemporary world. With its substantial presence in the drinking water of more than thirty countries worldwide, and with an affected population of more than 100 million, it has been termed as the largest mass poisoning in human history. In this special issue, we have tried to provide the most recent research advances on controls and challenges of this severe groundwater contaminant. The articles in this issue, originally presented in the 2006 Geological Society of America Annual Meeting, address the distribution of As in various geologic and geographic settings, the controls of redox and other geochemical parameters on its spatial and temporal variability, the influence of sedimentology and stratigraphy on its occurrence, and mechanisms controlling its mobility. The knowledge available from these studies should provide a roadmap for future research in arsenic contamination hydrology.

Journal of Contaminant Hydrology↗

USGS2019

The application of oyster reefs in shoreline protection: Are we over‐engineering for an ecosystem engineer?

Oyster reef living shorelines have been proposed as an effective alternative to traditional coastal defence structures (e.g. bulkheads, breakwaters), with the benefit that they may keep pace with sea‐level rise and provide co‐benefits, such as habitat provision. However, there remains uncertainty about the effectiveness of shoreline protection provided by oyster reefs, which limits their broader application. We draw evidence from studies along the east and gulf coasts of the United States, where much research and implementation of oyster reef restoration has occurred, to better define the existing gaps in our understanding of the use of restored oyster reefs for shoreline protection. We find potential disconnects between ecological and engineering functions of reefs. In response, we outline how engineering and ecological principles are used in the design of oyster reef living shorelines and highlight knowledge gaps where an integration of these disciplines will lead to their more effective application. Synthesis and applications . This work highlights the necessary steps to advance the application of oyster reef living shorelines. Importantly, future research should focus on appropriate designs and conditions needed for these structures to effectively protect our coasts from erosion, while supporting a sustainable oyster population, thereby providing actionable nature‐based alternatives for coastal defence to diverse end‐users.

East Coast of Continental United States↗

USGS2021

Foreword: Control and conservation of lampreys beyond 2020 - Proceedings from the 3rd Sea Lamprey International Symposium (SLIS III)

Introduction to the special issue on the 3rd Sea Lamprey International Symposium. The compiled papers in this special issue consist of a combination of syntheses requested in advance of the symposium and perspectives that emerged from the symposium break-out discussions. These written contributions address the symposium goals of updating our understanding of sea lamprey control and research on lampreys since SLIS II and of exploring new ideas and posing new methods for controlling sea lamprey in the Great Lakes and supporting conservation of lampreys in their native ranges.

Journal of Great Lakes Research↗

USGS2011

Mapping and monitoring Louisiana's mangroves in the aftermath of the 2010 Gulf of Mexico Oil spill

Information regarding the present condition, historical status, and dynamics of mangrove forests is needed to study the impacts of the Gulf of Mexico oil spill and other stressors affecting mangrove ecosystems. Such information is unavailable for Louisiana at sufficient spatial and thematic detail. We prepared mangrove forest distribution maps of Louisiana (prior to the oil spill) at 1 m and 30 m spatial resolution using aerial photographs and Landsat satellite data, respectively. Image classification was performed using a decision-tree classification approach. We also prepared land-cover change pairs for 1983, 1984, and every 2 y from 1984 to 2010 depicting “ecosystem shifts” (e.g., expansion, retraction, and disappearance). This new spatiotemporal information could be used to assess short-term and long-term impacts of the oil spill on mangroves. Finally, we propose an operational methodology based on remote sensing (Landsat, Advanced Spaceborne Thermal Emission and Reflection Radiometer [ASTER], hyperspectral, light detection and ranging [LIDAR], aerial photographs, and field inventory data) to monitor the existing and emerging mangrove areas and their disturbance and regrowth patterns. Several parameters such as spatial distribution, ecosystem shifts, species composition, and tree height/biomass could be measured to assess the impact of the oil spill and mangrove recovery and restoration. Future research priorities will be to quantify the impacts and recovery of mangroves considering multiple stressors and perturbations, including oil spill, winter freeze, sea-level rise, land subsidence, and land-use/land-cover change for the entire Gulf Coast.

Journal of Coastal Research↗

USGS1999

Sequential filling of a late paleozoic foreland basin

Through the use of an extensive data base of geophysical well logs, parasequence-scale subdivisions within a late Paleozoic synorogenic clastic wedge resolve cycles of sequential subsidence of a foreland basin, sediment progradation, subsidence of a carbonate shelf edge, diachronously subsiding discrete depositional centers, and basinwide transgression. Although temporal resolution of biostratigraphic markers is less precise in Paleozoic successions than in younger basins, parasequence-scale subdivisions provide more detailed resolution within marker-defined units in Paleozoic strata. As an example, the late Paleozoic Black Warrior basin in the foreland of the Ouachita thrust belt is filled with a synorogenic clastic wedge, the lower part of which intertongues with the fringe of a cratonic carbonate facies in the distal part of the basin. The stratal geometry of one tongue of the carbonate facies (lower tongue of Bangor Limestone) defines a ramp that grades basinward into a thin black shale. An overlying tongue of the synorogenic clastic wedge (lower tongue of Parkwood Formation) consists of cyclic delta and delta-front deposits, in which parasequences are defined by marine-flooding surfaces above coarsening- and shallowing-upward successions of mudstone and sandstone. Within the lower Parkwood tongue, two genetic stratigraphic sequences (A and B) are defined by parasequence offlap and downlap patterns and are bounded at the tops by basinwide maximum-flooding surfaces. The distribution of parasequences within sequences A and B indicates two cycles of sequential subsidence (deepening) and progradation, suggesting subsidence during thrust advance and progradation during thrust quiescence. Parasequence stacking in sequences A and B also indicates diachronous differential tectonic subsidence of two discrete depositional centers within the basin. The uppermost sequence (C) includes reworked sandstones and an overlying shallow-marine limestone, a vertical succession that reflects no tectonic subsidence, a very minor or null sediment supply, and basinwide transgression. The temporal resolution at parasequence scale significantly improves the resolution of the tectonic history of the thrust belt-foreland basin system.

Journal of Sedimentary Research↗

USGS2015

Glaciological and marine geological controls on terminus dynamics of Hubbard Glacier, southeast Alaska

Hubbard Glacier, located in southeast Alaska, is the world's largest non-polar tidewater glacier. It has been steadily advancing since it was first mapped in 1895; occasionally, the advance creates an ice or sediment dam that blocks a tributary fjord (Russell Fiord). The sustained advance raises the probability of long-term closure in the near-future, which will strongly impact the ecosystem of Russell Fiord and the nearby community of Yakutat. Here, we examine a 43-year record of flow speeds and terminus position to understand the large-scale dynamics of Hubbard Glacier. Our long-term record shows that the rate of terminus advance has increased slightly since 1895, with the exception of a slowed advance between approximately 1972 and 1984. The short-lived closure events in 1986 and 2002 were not initiated by perturbations in ice velocity or environmental forcings, but were likely due to fluctuations in sedimentation patterns at the terminus. This study points to the significance of a coupled system where short-term velocity fluctuations and morainal shoal development control tidewater glacier terminus position.

Alaska↗

USGS2015

A rapid estimation of near field tsunami run-up

Many efforts have been made to quickly estimate the maximum run-up height of tsunamis associated with large earthquakes. This is a difficult task, because of the time it takes to construct a tsunami model using real time data from the source. It is possible to construct a database of potential seismic sources and their corresponding tsunami a priori.However, such models are generally based on uniform slip distributions and thus oversimplify the knowledge of the earthquake source. Here, we show how to predict tsunami run-up from any seismic source model using an analytic solution, that was specifically designed for subduction zones with a well defined geometry, i.e., Chile, Japan, Nicaragua, Alaska. The main idea of this work is to provide a tool for emergency response, trading off accuracy for speed. The solutions we present for large earthquakes appear promising. Here, run-up models are computed for: The 1992 Mw 7.7 Nicaragua Earthquake, the 2001 Mw 8.4 Perú Earthquake, the 2003Mw 8.3 Hokkaido Earthquake, the 2007 Mw 8.1 Perú Earthquake, the 2010 Mw 8.8 Maule Earthquake, the 2011 Mw 9.0 Tohoku Earthquake and the recent 2014 Mw 8.2 Iquique Earthquake. The maximum run-up estimations are consistent with measurements made inland after each event, with a peak of 9 m for Nicaragua, 8 m for Perú (2001), 32 m for Maule, 41 m for Tohoku, and 4.1 m for Iquique. Considering recent advances made in the analysis of real time GPS data and the ability to rapidly resolve the finiteness of a large earthquake close to existing GPS networks, it will be possible in the near future to perform these calculations within the first minutes after the occurrence of similar events. Thus, such calculations will provide faster run-up information than is available from existing uniform-slip seismic source databases or past events of pre-modeled seismic sources.

Journal of Geophysical Research↗

USGS2025

Ultraviolet and visible remote sensing of volcanic gases

As magma rises in volcanic systems, volatile species exsolve from the silicate melt and are emitted as gases into the atmosphere. Measuring the magnitude and composition of gas emissions from volcanoes provides insights into processes occurring deep within the Earth and helps constrain the impact of volcanic degassing on atmospheric chemistry. Optical remote sensing techniques allow volcanic gas emissions to be characterized without the need to access hazardous areas near active volcanic vents. This paper reviews the state of the art in ultraviolet and visible volcanic gas remote sensing from the ground, air, and space. Special attention is given to discussing the physics of atmospheric radiative transfer on which these techniques are based. The functionality and limitations of different remote sensing instruments are examined, making clear that the ideal choice of instrumentation will depend on the volcanic system to which it is applied and the sought measurement parameters. Common algorithms for determining trace gas column densities, gas burdens, and volcanic emission rates from measurements of spectral radiance are outlined and compared, showing how some algorithms attempt to model the physics of the measurement while others maximize sensitivity. Several examples demonstrate how remote sensing measurements continue to advance our understanding of volcanic systems and their impact on the atmosphere. Finally, a few promising directions of inquiry are suggested that could lead to improvements in remote sensing instrumentation and analysis techniques. By combining spectroscopic and imaging techniques, improving our understanding of atmospheric radiative transfer, expanding the suite of target gases, and increasing the coverage and frequency of observations, we stand to significantly improve our ability to detect and quantify volcanic gas emissions and gain new insights into important Earth-system processes.

Journal of Volcanology and Geothermal Research↗

USGS2013

Selection of hyperspectral narrowbands (HNBs) and composition of hyperspectral twoband vegetation indices (HVIs) for biophysical characterization and discrimination of crop types using field reflectance and Hyperion/EO-1 data

The overarching goal of this study was to establish optimal hyperspectral vegetation indices (HVIs) and hyperspectral narrowbands (HNBs) that best characterize, classify, model, and map the world's main agricultural crops. The primary objectives were: (1) crop biophysical modeling through HNBs and HVIs, (2) accuracy assessment of crop type discrimination using Wilks' Lambda through a discriminant model, and (3) meta-analysis to select optimal HNBs and HVIs for applications related to agriculture. The study was conducted using two Earth Observing One (EO-1) Hyperion scenes and other surface hyperspectral data for the eight leading worldwide crops (wheat, corn, rice, barley, soybeans, pulses, cotton, and alfalfa) that occupy ~70% of all cropland areas globally. This study integrated data collected from multiple study areas in various agroecosystems of Africa, the Middle East, Central Asia, and India. Data were collected for the eight crop types in six distinct growth stages. These included (a) field spectroradiometer measurements (350-2500 nm) sampled at 1-nm discrete bandwidths, and (b) field biophysical variables (e.g., biomass, leaf area index) acquired to correspond with spectroradiometer measurements. The eight crops were described and classified using ~20 HNBs. The accuracy of classifying these 8 crops using HNBs was around 95%, which was ~ 25% better than the multi-spectral results possible from Landsat-7's Enhanced Thematic Mapper+ or EO-1's Advanced Land Imager. Further, based on this research and meta-analysis involving over 100 papers, the study established 33 optimal HNBs and an equal number of specific two-band normalized difference HVIs to best model and study specific biophysical and biochemical quantities of major agricultural crops of the world. Redundant bands identified in this study will help overcome the Hughes Phenomenon (or “the curse of high dimensionality”) in hyperspectral data for a particular application (e.g., biophysi- al characterization of crops). The findings of this study will make a significant contribution to future hyperspectral missions such as NASA's HyspIRI.

Africa;Central Asia;Middle East↗

USGS2015

Nest predation research: Recent findings and future perspectives

Nest predation is a key source of selection for birds that has attracted increasing attention from ornithologists. The inclusion of new concepts applicable to nest predation that stem from social information, eavesdropping or physiology has expanded our knowledge considerably. Recent methodological advancements now allow focus on all three players within nest predation interactions: adults, offspring and predators. Indeed, the study of nest predation now forms a vital part of avian research in several fields, including animal behaviour, population ecology, evolution and conservation biology. However, within nest predation research there are important aspects that require further development, such as the comparison between ecological and evolutionary antipredator responses, and the role of anthropogenic change. We hope this review of recent findings and the presentation of new research avenues will encourage researchers to study this important and interesting selective pressure, and ultimately will help us to better understand the biology of birds.

Journal of Ornithology↗

USGS2006

Tectonic stressing in California modeled from GPS observations

What happens in the crust as a result of geodetically observed secular motions? In this paper we find out by distorting a finite element model of California using GPS-derived displacements. A complex model was constructed using spatially varying crustal thickness, geothermal gradient, topography, and creeping faults. GPS velocity observations were interpolated and extrapolated across the model and boundary condition areas, and the model was loaded according to 5-year displacements. Results map highest differential stressing rates in a 200-km-wide band along the Pacific-North American plate boundary, coinciding with regions of greatest seismic energy release. Away from the plate boundary, GPS-derived crustal strain reduces modeled differential stress in some places, suggesting that some crustal motions are related to topographic collapse. Calculated stressing rates can be resolved onto fault planes: useful for addressing fault interactions and necessary for calculating earthquake advances or delays. As an example, I examine seismic quiescence on the Garlock fault despite a calculated minimum 0.1-0.4 MPa static stress increase from the 1857 M???7.8 Fort Tejon earthquake. Results from finite element modeling show very low to negative secular Coulomb stress growth on the Garlock fault, suggesting that the stress state may have been too low for large earthquake triggering. Thus the Garlock fault may only be stressed by San Andreas fault slip, a loading pattern that could explain its erratic rupture history.

Journal of Geophysical Research B: Solid Earth↗

USGS2016

sbtools: A package connecting R to cloud-based data for collaborative online research

The adoption of high-quality tools for collaboration and reproducible research such as R and Github is becoming more common in many research fields. While Github and other version management systems are excellent resources, they were originally designed to handle code and scale poorly to large text-based or binary datasets. A number of scientific data repositories are coming online and are often focused on dataset archival and publication. To handle collaborative workflows using large scientific datasets, there is increasing need to connect cloud-based online data storage to R. In this article, we describe how the new R package sbtools enables direct access to the advanced online data functionality provided by ScienceBase, the U.S. Geological Survey’s online scientific data storage platform.

The R Journal↗

USGS2019

Age of the dacite of Sunset Amphitheater, a voluminous Pleistocene tephra from Mount Rainier (USA), and implications for Cascade glacial stratigraphy

The dacite of Sunset Amphitheater, Mount Rainier (USA), illustrates the difficulties in establishing accurate ages of Pleistocene tephra eruptions. Nearly uniform whole-rock, glass, and mineral compositions, texture, and phenocryst assemblage establish that certain conspicuous dissected pumice exposures scattered from Mount Rainier to southern Puget Sound are products of the same Pleistocene Plinian eruption . Deposit thicknesses and pumice sizes support an eruption on the order of low Volcanic Explosivity Index (VEI) 5, atypically explosive for dominantly lava-producing Mount Rainier. Statistically permissible 40 Ar/ 39 Ar plateau ages of plagioclase phenocryst separates are 138 ± 20 ka and 101 ± 11 ka (2σ). A previously published result of 206 ± 11 ka is herein shown to result from a sample selection error. Zircon from the pumice yields a U-Th crystallization age of 147 ± 8 ka if the isochron is required to pass through the tephra U-Th isotopic composition . In contrast, pooled (U-Th)/He measurements on the zircon yield an age of 85 ± 6 ka (2σ), which accords with well-behaved 40 Ar/ 39 Ar ages of stratigraphically associated lavas high on Mount Rainier, and is the best estimate of the pumice's true eruption age. Inclusions of undegassed melt (glass) in the plagioclase separates are proposed as biasing apparent 40 Ar/ 39 Ar plateau ages to old values through coupling of undegassed magmatic excess Ar with radiogenic Ar that accumulated post-eruptively from relatively K-rich glass. U-Th ages record zircon growth prior to eruption, consistent with a possible complex history of advanced solidification followed by remobilization . The ca. 85 ka eruption age confirms that bracketing glacial tills on the flanks of Mount Rainier were products of the Penultimate Glaciation (MIS 6) and Last Glacial Maximum (MIS 2). This eruption age also provides an important time marker for glacial and other sedimentary deposits in southern Puget Sound lowland that, excepting the Vashon Drift (MIS 2), generally lack reliable age determinations.

Washington↗

USGS1994

The 1989-1990 eruptions of Redoubt Volcano: an introduction

Redoubt Volcano, located on the west side of Cook Inlet in south-central Alaska, erupted explosively on over 20 separate occasions between December 14, 1989 and April 21, 1990. Fourteen lava domes were emplaced in the summit area, thirteen of which were subsequently destroyed. The eruption caused economic losses estimated at over $160,000,000 making this the second most costly eruption in U.S. history. This economic impact provided the impetus for a integrated comprehensive account of an erupting volcano using both modern and classical research and modern techniques which in turn led to advances in eruption monitoring and interpretation. Research on such topics as dome formation and collapse and the resulting pyroclastic flows, elutriated ash, lightning, tephra, and flooding was blended with the rapid communication of associated hazards to a large user group. The seismology successes in predicting and monitoring eruption dynamics were due in part to (1) the recognition of long-period seismic events as indicators of the readiness of the volcano to erupt, and (2) to the development of new tools that allowed the seismicity to be assessed instantaneously. Integrated studies of the petrology of erupted products and volatile content over time gave clues as to the progress of the eruption towards completion.

Alaska↗

USGS2005

The calcite → aragonite transformation in low-Mg marble: Equilibrium relations, transformations mechanisms, and rates

Experimental transformation of a rather pure natural calcite marble to aragonite marble did not proceed via the expected straightforward polymorphic replacement. Instead, the small amount of Mg in the starting material (0.36 wt %) was excluded from the growing aragonite and diffused preferentially into the remaining calcite grains, producing Mg-rich calcite rods that persisted as relicts. Nucleation of aragonite occurred exclusively on grain boundaries, with aragonite [001] oriented subparallel to calcite [0001]. The aragonite crystals preferentially consumed the calcite crystal on which they nucleated, and the reaction fronts developed preferentially along the {010} and {110} planes of aragonite. Each aragonite neoblast that grew was nearly free of Mg (typically <0.1 wt %). The excess Mg was taken up by the calcite grains in between, stabilizing them and causing a few volume percent rodlike relicts of Mg-enriched calcite (up to 10 wt % MgO) to be left behind by the advancing reaction front. The aragonite growth rates are approximately linear and range from &sim;3 × 10 −11 m s −1 at 600°C to &sim;9 × 10 −9 m s −1 at 850°C, with an apparent activation enthalpy of 166 ± 91 kJ mol −1 . This reaction mechanism and the resultant texture are akin to cellular precipitation reactions in metals. Similar transformation textures have been reported from high-Mg marbles in Japan and China that disproportionated to low-Mg calcite and dolomite.

Journal of Geophysical Research B: Solid Earth↗