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At least 1,063 records · Page 59Linked to original sources
USGS2025

Widespread thiamine deficiency in California salmon linked to an anchovy-dominated marine prey base

Thiamine (vitamin B 1 ) deficiency in marine systems is a globally significant threat to marine life. In 2020, newly hatched Chinook salmon ( Oncorhynchus tshawytscha ) fry in California’s Central Valley (CCV) hatcheries swam in corkscrew patterns and died at unusually high rates due to a lack of this essential vitamin. We subsequently investigated the impacts and causes of thiamine deficiency in California’s anadromous salmonids. Our laboratory studies defined the relationship between thiamine concentrations in Chinook salmon eggs and early life-stage survival in offspring; we used these data to develop a model that estimated 26 to 48% thiamine-dependent fry mortality across consecutive years (2020–2021) for winter-run Chinook salmon. We established an egg surveillance effort that found widespread thiamine deficiency in CCV Chinook salmon in 2020 and 2021, and emerging thiamine deficiency in Klamath River and Trinity River coho salmon ( Oncorhynchus kisutch ) in 2021. We determined that thiamine injections into adults raised egg thiamine concentrations above levels found to impact early life-stage survival and swimming behavior. Ocean surveys, prey nutrition, salmon gut contents, and stable isotope data link thiamine deficiency to an ocean diet dominated by a booming population of northern anchovy ( Engraulis mordax ). This forage fish had low thiamine, high lipid, and high thiaminase activity levels consistent with both a thiaminase and oxidative stress hypothesis for causing thiamine deficiency in California salmon. Our research suggests California’s already stressed anadromous salmonids will continue to be impacted by thiamine deficiency as long as their ocean forage base and diet are dominated by northern anchovy.

Proceedings of the National Academy of Sciences↗
USGS2024

An evaluation of tradeoffs in restoring ephemeral vs. perennial habitats to conserve animal populations

Introduction: Habitat loss and degradation pose significant threats to global fish and wildlife populations, prompting substantial investments in habitat creation and restoration efforts. Not all habitats provide equal benefits, leading to challenges in prioritizing restoration actions. For example, juvenile anadromous salmonids require high quality rearing aquatic habitats to achieve the physiological requirements needed to successfully migrate to the ocean. However, there are profound disagreements among anadromous salmon restoration managers whether it is best to focus efforts on restoring in-channel habitats that are available for the entire rearing period or floodplain habitats that, while facilitating greater growth and survival than in-channel habitats, are only available for a few weeks at a time and are typically only activated every two-to-three years. Methods: We used an existing fall-run Chinook salmon decision-support model to evaluate under what conditions floodplain restoration would provide greater benefits than in-channel habitat restoration. The simulations included a wide range of floodplain inundation frequencies and durations and floodplain benefits in the form of increased survival and growth relative to in-channel habitats. Results: The simulations results indicated that in-channel habitat restoration was always the best habitat restoration action when there was no existing in-channel habitat despite simulating a wide range of flood frequency, duration, and growth and survival benefits. Floodplain restoration was generally best when there was sufficient in-channel habitat available to successfully rear most of the juveniles produced by the returning adult salmon. Discussion: We hypothesize that in-channel and floodplain habitats have different roles in salmon population maintenance with in-channel habitats regulating the overall population size and floodplains acting as recurrent resource pulses. Our study provides a quantitative framework to evaluate the benefit of these two habitat types and provides generalizable rulesets that can be used by managers when implementing habitat restoration strategies for species that inhabit both in-channel and floodplain habitats.

California↗
USGS2013

Dynamics of seabird colonies vulnerable to sea-level rise at French Frigate Shoals, Hawai`i

Globally, seabirds are vulnerable to anthropogenic threats both at sea and on land. Seabirds typically nest colonially and show strong site fidelity; therefore, conservation strategies could benefit from an understanding of the population dynamics and vulnerability of breeding colonies to climate change. More than 350 atolls exist across the Pacific Ocean; while they provide nesting habitat for many seabirds, they are also vulnerable to sea-level rise. We used French Frigate Shoals, the largest atoll in the Hawaiian Archipelago, as a case study to explore seabird colony dynamics and the potential consequences of sea-level rise. We compiled a unique combination of data sets: historical observations of islands and seabirds, a 30-year time series of population abundance, LiDAR- (light detection and ranging) derived elevations, and satellite imagery. To model population dynamics for ten species at Tern Island from 1980 to 2009, we used the Gompertz model with parameters for the population growth rate, density dependence, process variation, and observation error. We used a Bayesian approach to estimate the parameters. All species increased in a pattern that provided evidence of density dependence. Density dependence may exacerbate the consequences of sea-level rise on seabirds because species that are already near the carrying capacity of the nesting habitat will be limited more than species that still have space for population growth. Laysan Albatross ( Phoebastria immutabilis ), Great Frigatebird ( Fregata minor ), Red-tailed Tropicbird ( Phaethon rubricauda ), Masked Booby ( Sula dactylatra ), Gray-backed Tern ( Onychoprion lunatus ), and White Tern ( Gygis alba ) are likely already at carrying capacity at Tern Island and therefore are most likely to be negatively impacted by sea-level rise. We project 12% of French Frigate Shoals (excluding La Perouse Pinnacle) will be inundated with +1.0 m sea-level rise or 32% with +2.0 m. Gray-backed Terns that nest along the coastal perimeters of islands and shrub-nesting species that are habitat limited are especially vulnerable to sea-level rise. However, at Tern Island, seawalls and habitat creation may mitigate projected seabird population declines due to habitat loss. We predict substantial losses in seabird nesting habitat across the low-lying Hawaiian Islands by 2100 and emphasize the need to restore higher elevation seabird colonies.

Hawai'i↗
USGS2010

Estimating salinity intrusion effects due to climate change on the Lower Savannah River Estuary

The ability of water-resource managers to adapt to future climatic change is especially challenging in coastal regions of the world. The East Coast of the United States falls into this category given the high number of people living along the Atlantic seaboard and the added strain on resources as populations continue to increase, particularly in the Southeast. Increased temperatures, changes in regional precipitation regimes, and potential increased sea level may have a great impact on existing hydrological systems in the region. The Savannah River originates at the confluence of the Seneca and Tugaloo Rivers, near Hartwell, Ga., and forms the state boundary between South Carolina and Georgia. The J. Strom Thurmond Dam and Lake, located 238 miles upstream from the Atlantic Ocean, is responsible for most of the flow regulation that affects the Savannah River from Augusta, Ga., to the coast. The Savannah Harbor experiences semi-diurnal tides of two low and two high tides in a 24.8-hour period with pronounced differences in tidal range between neap and spring tides occurring on a 14-day and 28-day lunar cycle. Salinity intrusion results from the interaction of three principal forces - streamflow, mean tidal water levels, and tidal range. To analyze, model, and simulate hydrodynamic behaviors at critical coastal streamgages in the Lower Savannah River Estuary, data-mining techniques were applied to over 15 years of hourly streamflow, coastal water-quality, and water-level data. Artificial neural network (ANN) models were trained to learn the variable interactions that cause salinity intrusions. Streamflow data from the 9,850 square-mile Savannah River Basin were input into the model as time-delayed variables. Tidal inputs to the models were obtained by decomposing tidal water-level data into a “periodic” signal of tidal range and a “chaotic” signal of mean water levels. The ANN models were able to convincingly reproduce historical behaviors and generate alternative scenarios of interest. Important freshwater resources are located proximal to the freshwater-saltwater interface of the estuary. The Savannah National Wildlife Refuge is located in the upper portion of the Savannah River Estuary. The tidal freshwater marsh is an essential part of the 28,000-acre refuge and is home to a diverse variety of wildlife and plant communities. Two municipal freshwater intakes are located upstream from the refuge. To evaluate the impact of climate change on salinity intrusion on these resources, inputs of streamflows and mean tidal water levels were modified to incorporate estimated changes in precipitation patterns and sea-level rise appropriate for the Southeastern United States. Changes in mean tidal water levels were changed parametrically for various sea-level rise conditions. Preliminary model results at the U.S. Geological Survey (USGS) Interstate-95 streamgage (station 02198840) for a 7½-year simulation show that historical daily salinity concentrations never exceeded 0.5 practical salinity units (psu). A 1-foot sea-level rise (ft, 30.5 centimeters [cm]) would increase the number of days of salinity concentrations greater than 0.5 psu to 47 days. A 2-ft (61 cm) sea-level rise would increase the number of days to 248.

Georgia, South Carolina↗
USGS2021

Simulated effects of sea-level rise on the shallow, fresh groundwater system of Assateague Island, Maryland and Virginia

The U.S. Geological Survey, in cooperation with the National Park Service, developed a three-dimensional groundwater-flow model for Assateague Island in eastern Maryland and Virginia to assess the effects of sea-level rise on the groundwater system. Sea-level rise is expected to increase the altitude of the water table in barrier island aquifer systems, possibly leading to adverse effects to ecosystems on the barrier islands. The potential effects of sea-level rise were evaluated by simulating groundwater conditions under sea-level-rise scenarios of 20 centimeters (cm), 40 cm, and 60 cm. Results show that as sea level rises, low-lying areas of the island originally represented as receiving freshwater recharge in the baseline scenario are inundated by saltwater. This change from freshwater recharge to saltwater decreases the overall amount of freshwater recharging the system. As the water table rises in response to the higher sea levels, freshwater flow out of the system changes, with more freshwater leaving as submarine groundwater discharge and less freshwater leaving as seeps and evapotranspiration. At the current land-surface altitude, as much as 50 percent of the island may be inundated with a 60-cm rise in sea level, and the low-lying marshes may change from freshwater to saltwater. Groundwater levels at 32 wells were monitored for as long as 12 months between October 2014 and September 2015 on Assateague Island. Results from objective classification analysis of 14 shallow monitoring wells show two dominant processes affecting groundwater levels in two different settings on the island. On the western side of the island, between the primary dune and the inland bays, water levels clearly respond to precipitation events. This side of the island is more protected from ocean tides and typically is more vegetated than the eastern side. On the eastern side of the island, between the Atlantic Ocean and the primary dune, water levels clearly respond to tidal events. Specific conductance was measured at four wells, two on the western part of the island and two on the eastern part of the island. Specific conductance values in the two wells west of the primary dune show episodic decreases, coinciding with precipitation events. Specific conductance values in the two wells on the eastern side of the primary dune show episodic increases, coinciding with high-tide events. These high frequency monitoring data are intended to aid in designing a monitoring network that can document both short-term and long-term hydrologic processes on Assateague Island National Seashore. This study uses a modeling approach consistent with models developed for Gateway National Recreation Area, Sandy Hook Unit (New Jersey) and Fire Island National Seashore (New York). Combined, these models are meant to improve the regional capabilities for predicting climate-change effects on barrier islands and provide resource managers with a common set of tools for adaptation and mitigation of potentially adverse effects of sea-level rise.

Maryland, Virginia↗
USGS2007

Antarctica and global paleogeography: from Rodinia, rhrough Gondwanaland and Pangea, to the birth of the Southern Ocean and the opening of gateways

Neoproterozoic Rodinia reconstructions associate East Antarctica (EANT) with cratonic Western Australia. By further linking EANT to both Gondwana and Pangea with relative plate circuits, a Synthetic Apparent Polar Wander (SAPW) path for EANT is calculated. This path predicts that EANT was located at tropical to subtropical southerly latitudes from ca. 1 Ga to 420 Ma. Around 400 Ma and again at 320 Ma, EANT underwent southward drift. Ca. 250 Ma Antarctica voyaged briefly north but headed south again ca. 200 Ma. Since 75 Ma EANT became surrounded by spreading centers and has remained extremely stable. Although paleomagnetic data of the blocks that embrace West Antarctica are sparse, we attempt to model their complex kinematics since the Mesozoic. Together with the SAPW path and a revised circum-Antarctic seafloor spreading history we construct a series of new paleogeographic maps.

Open-File Report↗
USGS2010

Southeast Regional Assessment Project for the National Climate Change and Wildlife Science Center, U.S. Geological Survey

The Southeastern United States spans a broad range of physiographic settings and maintains exceptionally high levels of faunal diversity. Unfortunately, many of these ecosystems are increasingly under threat due to rapid human development, and management agencies are increasingly aware of the potential effects that climate change will have on these ecosystems. Natural resource managers and conservation planners can be effective at preserving ecosystems in the face of these stressors only if they can adapt current conservation efforts to increase the overall resilience of the system. Climate change, in particular, challenges many of the basic assumptions used by conservation planners and managers. Previous conservation planning efforts identified and prioritized areas for conservation based on the current environmental conditions, such as habitat quality, and assumed that conditions in conservation lands would be largely controlled by management actions (including no action). Climate change, however, will likely alter important system drivers (temperature, precipitation, and sea-level rise) and make it difficult, if not impossible, to maintain recent historic conditions in conservation lands into the future. Climate change will also influence the future conservation potential of non-conservation lands, further complicating conservation planning. Therefore, there is a need to develop and adapt effective conservation strategies to cope with the effects of climate and landscape change on future environmental conditions. Congress recognized this important issue and authorized the U.S. Geological Survey (USGS) National Climate Change and Wildlife Science Center (NCCWSC; http://nccw.usgs.gov/) in the Fiscal Year 2008. The NCCWSC will produce science that will help resource management agencies anticipate and adapt to climate change impacts to fish, wildlife, and their habitats. With the release of Secretarial Order 3289 on September 14, 2009, the mandate of the NCCWSC was expanded to address climate change-related impacts on all Department of the Interior (DOI) resources. The NCCWSC will establish a network of eight DOI Regional Climate Science Centers (RCSCs) that will work with a variety of partners to provide natural resource managers with tools and information that will help them anticipate and adapt conservation planning and design for projected climate change. The forecasting products produced by the RCSCs will aid fish, wildlife, and land managers in designing suitable adaptive management approaches for their programs. The DOI also is developing Landscape Conservation Cooperatives (LCCs) as science and conservation action partnerships at subregional scales. The USGS is working with the Southeast Region of the U.S. Fish and Wildlife Service (FWS) to develop science collaboration between the future Southeast RCSC and future LCCs. The NCCWSC Southeast Regional Assessment Project (SERAP) will begin to develop regional downscaled climate models, land cover change models, regional ecological models, regional watershed models, and other science tools. Models and data produced by SERAP will be used in a collaborative process between the USGS, the FWS (LCCs), State and federal partners, nongovernmental organizations, and academia to produce science at appropriate scales to answer resource management questions. The SERAP will produce an assessment of climate change, and impacts on land cover, ecosystems, and priority species in the region. The predictive tools developed by the SERAP project team will allow end users to better understand potential impacts of climate change and sea level rise on terrestrial and aquatic populations in the Southeastern United States. The SERAP capitalizes on the integration of five existing projects: (1) the Multi-State Conservation Grants Program project "Designing Sustainable Landscapes," (2) the USGS multidisciplinary Science Thrust project "Water Availability for Ecological Needs," (3) the USGS Southeast Pilot Project "Climate Change in the Southeastern U.S. and its Impacts on Bird Distributions and Habitats," (4) a sea-level rise impacts study envisioned jointly with the National Oceanic and Atmospheric Administration (NOAA), and (5) two USGS sea-level rise impact assessment projects that address inundation hazards and provide probabilistic forecasts of coastal geomorphic change. The SERAP will expand on these existing projects and include the following tasks, which were initiated in summer 2009: * Regionally downscaled probabilistic climate-change projections * Integrated coastal assessment * Integrated terrestrial assessment * Multi-resolution assessment of potential climate change effects on biological resources: aquatic and hydrologic dynamics * Optimal conservation strategies to cope with climate change The SERAP seeks to formally integrate these tasks to aid conservation planning and design so that ecosystem management decisions can be optimized for providing desirable outcomes across a range of species and environments. The following chapters detail SERAP's efforts in providing a suite of regional climate, watershed, and landscape-change analyses and develop the interdisciplinary framework required for the biological planning phases of adaptive management and strategic conservation. The planning phase will include the identification of conservation alternatives, development of predictive models and decision support tools, and development of a template to address similar challenges and goals in other regions. The project teams will explore and develop ways to link the various ecological models arising from each component. The SERAP project team also will work closely with members of the LCCs and other partnerships throughout the life of the project to ensure that the objectives of the project meet resources mangers needs in the Southeast.

Open-File Report↗
USGS2016

Unusually large tsunamis frequent a currently creeping part of the Aleutian megathrust

Current models used to assess earthquake and tsunami hazards are inadequate where creep dominates a subduction megathrust. Here we report geological evidence for large tsunamis, occurring on average every 300–340 years, near the source areas of the 1946 and 1957 Aleutian tsunamis. These areas bookend a postulated seismic gap over 200 km long where modern geodetic measurements indicate that the megathrust is currently creeping. At Sedanka Island, evidence for large tsunamis includes six sand sheets that blanket a lowland facing the Pacific Ocean, rise to 15 m above mean sea level, contain marine diatoms, cap terraces, adjoin evidence for scour, and date from the past 1700 years. The youngest sheet, and modern drift logs found as far as 800 m inland and >18 m elevation, likely record the 1957 tsunami. Modern creep on the megathrust coexists with previously unrecognized tsunami sources along this part of the Aleutian Subduction Zone.

Alaska↗
USGS2018

The influence of seep habitats on sediment macrofaunal biodiversity and functional traits

Chemosynthetic ecosystems in the Gulf of Mexico (GOM) support dense communities of seep megafaunal invertebrates that rely on endosymbiotic bacteria for nutrition. Distinct infaunal communities are associated with the biogenic habitats created by seep biota, where habitat heterogeneity and sediment geochemistry influence local macrofaunal community structure. Here we examine the community structure and function of seep infaunal communities in the GOM in relation to environmental drivers and estimated proximity to seeps. We modeled seep distribution within 3 major seep fields (AC601, GC852, and AT340), and examined the influence of proximity to seep and associated sediment environment on infaunal community structure and function. To model seep habitat distribution, we used known seep occurrence data from ROV and towed camera images, terrain variables derived from high resolution multibeam bathymetry (gridded to 3 m resolution), and a maximum entropy (Maxent) approach. Model performance was high, with mean area under the curve for each habitat ranging from 0.851 for mussel to 0.908 for tubeworm habitat, with the models highly influenced by terrain rugosity. Replicate sediment cores were collected from the three sites in 2007 and processed for macrofauna and environmental characteristics. A majority of the taxa (86%) occurred within 16 m of modeled seep habitat and increased distance from modeled seeps was generally associated with lower calculated seep index coupled with decreased macrofaunal densities. Distance-based linear regression indicated that patterns in macrofaunal communities were driven by proximity to modeled seep habitat and profile curvature, a metric for the shape of the maximum slope. Similarly, variance in infaunal functional traits was best explained by proximity to seep, but also sediment C:N, reflecting the relative influence of sediment chemistry, including organic content, on infaunal communities. Results suggest that northern GOM seep infaunal community assemblages and their function are structured by factors that influence food availability and habitat heterogeneity. Given the abundance of seeps in the GOM and in the world’s oceans, this study supports the premise that the sphere of influence of seeps is spatially extensive.

Deep-Sea Research Part I: Oceanographic Research P↗
USGS2015

Water masses, ocean fronts, and the structure of Antarctic seabird communities: putting the eastern Bellingshausen Sea in perspective

Waters off the western Antarctic Peninsula (i.e., the eastern Bellingshausen Sea) are unusually complex owing to the convergence of several major fronts. Determining the relative influence of fronts on occurrence patterns of top-trophic species in that area, therefore, has been challenging. In one of the few ocean-wide seabird data syntheses, in this case for the Southern Ocean, we analyzed ample, previously collected cruise data, Antarctic-wide, to determine seabird species assemblages and quantitative relationships to fronts as a way to provide context to the long-term Palmer LTER and the winter Southern Ocean GLOBEC studies in the eastern Bellingshausen Sea. Fronts investigated during both winter (April–September) and summer (October–March) were the southern boundary of the Antarctic Circumpolar Current (ACC), which separates the High Antarctic from the Low Antarctic water mass, and within which are embedded the marginal ice zone and Antarctic Shelf Break Front; and the Antarctic Polar Front, which separates the Low Antarctic and the Subantarctic water masses. We used clustering to determine species' groupings with water masses, and generalized additive models to relate species' densities, biomass and diversity to distance to respective fronts. Antarctic-wide, in both periods, highest seabird densities and lowest species diversity were found in the High Antarctic water mass. In the eastern Bellingshausen, seabird density in the High Antarctic water mass was lower (as low as half that of winter) than found in other Antarctic regions. During winter, Antarctic-wide, two significant species groups were evident: one dominated by Adélie penguins ( Pygoscelis adeliae ) (High Antarctic water mass) and the other by petrels and prions (no differentiation among water masses); in eastern Bellingshausen waters during winter, the one significant species group was composed of species from both Antarctic-wide groups. In summer, Antarctic-wide, a High Antarctic group dominated by Adélie penguins, a Low Antarctic group dominated by petrels, and a Subantarctic group dominated by albatross were evident. In eastern Bellingshausen waters during summer, groups were inconsistent. With regard to frontal features, Antarctic-wide in winter, distance to the ice edge was an important explanatory factor for nine of 14 species, distance to the Antarctic Polar Front for six species and distance to the Shelf Break Front for six species; however, these Antarctic-wide models could not successfully predict spatial relationships of winter seabird density (individual species or total) and biomass in the eastern Bellingshausen. Antarctic-wide in summer, distance to land/Antarctic continent was important for 10 of 18 species, not a surprising result for these summer-time Antarctic breeders, as colonies are associated with ice-free areas of coastal land. Distance to the Shelf Break Front was important for 8 and distance to the southern boundary of the ACC was important for 7 species. These summer models were more successful in predicting eastern Bellingshausen species density and species diversity but failed to predict total seabird density or biomass. Antarctic seabirds appear to respond to fronts in a way similar to that observed along the well-studied upwelling front of the California Current. To understand fully the seabird patterns found in this synthesis, multi-disciplinary at-sea investigations, including a quantified prey field, are needed.

Deep-Sea Research Part II: Topical Studies in Ocea↗
USGS2010

Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: NLCD 2001 Tree Canopy

This tabular data set represents the mean percent tree canopy from the Canopy Layer of the National Land Cover Dataset 2001 (LaMotte and Wieczorek, 2010), compiled for every MRB_E2RF1 catchment of Major River Basins (MRBs, Crawford and others, 2006). The source data set represents tree canopy percentage for the conterminous United States for 2001. The Canopy Layer of the National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (http://www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). The MRB_E2RF1 catchments are based on a modified version of the U.S. Environmental Protection Agency's (USEPA) ERF1_2 and include enhancements to support national and regional-scale surface-water quality modeling (Nolan and others, 2002; Brakebill and others, 2011). Data were compiled for every MRB_E2RF1 catchment for the conterminous United States covering New England and Mid-Atlantic (MRB1), South Atlantic-Gulf and Tennessee (MRB2), the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy (MRB3), the Missouri (MRB4), the Lower Mississippi, Arkansas-White-Red, and Texas-Gulf (MRB5), the Rio Grande, Colorado, and the Great basin (MRB6), the Pacific Northwest (MRB7) river basins, and California (MRB8).

Data Series↗
USGS2010

Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: NLCD 2001 Imperviousness

This tabular data set represents the mean percent impervious surface from the Imperviousness Layer of the National Land Cover Dataset 2001, (LaMotte and Wieczorek, 2010), compiled for every MRB_E2RF1 catchment of selected Major River Basins (MRBs, Crawford and others, 2006). The source data set represents imperviousness for the conterminous United States for 2001. The Imperviousness Layer of the National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (http://www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). The MRB_E2RF1 catchments are based on a modified version of the U.S. Environmental Protection Agency's (USEPA) ERF1_2 and include enhancements to support national and regional-scale surface-water quality modeling (Nolan and others, 2002;Brakebill and others, 2011). Data were compiled for every MRB_E2RF1 catchment for the conterminous United States covering New England and Mid-Atlantic (MRB1), South Atlantic-Gulf and Tennessee (MRB2), the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy (MRB3), the Missouri (MRB4), the Lower Mississippi, Arkansas-White-Red, and Texas-Gulf (MRB5), the Rio Grande, Colorado, and the Great basin (MRB6), the Pacific Northwest (MRB7) river basins, and California (MRB8).

Data Series↗
USGS2010

Attributes for MRB_E2RF1 Catchments by Major River Basins in the Conterminous United States: NLCD 2001 Land Use and Land Cover

This tabular data set represents the estimated area of land use and land cover from the National Land Cover Dataset 2001 (LaMotte, 2008), compiled for every MRB_E2RF1 catchment of the Major River Basins (MRBs, Crawford and others, 2006). The source data set represents land use and land cover for the conterminous United States for 2001. The National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (http://www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). The MRB_E2RF1 catchments are based on a modified version of the U.S. Environmental Protection Agency's (USEPA) ERF1_2 and include enhancements to support national and regional-scale surface-water quality modeling (Nolan and others, 2002; Brakebill and others, 2011). Data were compiled for every MRB_E2RF1 catchment for the conterminous United States covering the South Atlantic-Gulf and Tennessee (MRB2), the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy (MRB3), the Missouri (MRB4), the Lower Mississippi, Arkansas-White-Red, and Texas-Gulf (MRB5) and the Pacific Northwest (MRB7) river basins.

Data Series↗
USGS2011

A behavior-oriented dynamic model for sandbar migration and 2DH evolution

A nonlinear model is developed to study the time‐dependent relationship between the alongshore variability of a sandbar, a ( t ), and alongshore‐averaged sandbar position, x c ( t ). Sediment transport equations are derived from energetics‐based formulations. A link between this continuous physical representation and a parametric form describing the migration of sandbars of constant shape is established through a simple transformation of variables. The model is driven by offshore wave conditions. The parametric equations are dynamically coupled such that changes in one term (i.e., x c ) drive changes in the other (i.e., a ( t )). The model is tested on 566 days of data from Palm Beach, New South Wales, Australia. Using weighted nonlinear least squares to estimate best fit model coefficients, the model explained 49% and 41% of the variance in measured x c and a ( t ), respectively. Comparisons against a 1‐D horizontal (1DH) version of the model showed significant improvements when the 2DH terms were included (1DH and 2DH Brier skill scores were −0.12 and 0.42, respectively). Onshore bar migration was not predicted in the 1DH model, while the 2DH model correctly predicted onshore migration in the presence of 2DH morphology and allowed the bar to remain closer to shore for a given amount of breaking, providing an important hysteresis to the system. The model is consistent with observations that active bar migration occurs under breaking waves with onshore migration occurring at timescales of days to weeks and increasing 2DH morphology, while offshore migration occurs rapidly under high waves and coincides with a reduction in 2DH morphology.

Journal of Geophysical Research C: Oceans↗
USGS2021

Global-scale changes to extreme ocean wave events due to anthropogenic warming

Extreme surface ocean waves are often primary drivers of coastal flooding and erosion over various time scales. Hence, understanding future changes in extreme wave events owing to global warming is of socio-economic and environmental significance. However, our current knowledge of potential changes in high-frequency (defined here as having return periods of less than 1 year) extreme wave events are largely unknown, despite being strongly linked to coastal hazards across time scales relevant to coastal management. Here, we present global climate-modeling evidence, based on the most comprehensive multi-method, multi-model wave ensemble, of projected changes in a core set of extreme wave indices describing high-frequency, extra-tropical storm-driven waves. We find changes in high-frequency extreme wave events of up to ∼50%–100% under RCP8.5 high-emission scenario; which is nearly double the expected changes for RCP4.5 scenario, when globally integrated. The projected changes exhibit strong inter-hemispheric asymmetry, with strong increases in extreme wave activity across the tropics and high latitudes of the Southern Hemisphere region, and a widespread decrease across most of the Northern Hemisphere. We find that the patterns of projected increase across these extreme wave events over the Southern Hemisphere region resemble their historical response to the positive anomaly of the Southern Annular Mode. Our findings highlight that many countries with low-adaptive capacity are likely to face increasing exposure to much more frequent extreme wave events in the future.

Environmental Research Letters↗
USGS2003

Geochemistry of the furnace magnetite bed, Franklin, New Jersey, and the relationship between stratiform iron oxide ores and stratiform zinc oxide-silicate ores in the New Jersey highlands

The New Jersey Highlands terrace, which is an exposure of the Middle Proterozoic Grenville orogenic belt located in northeastern United States, contains stratiform zinc oxide-silicate deposits at Franklin and Sterling Hill and numerous massive magnetite deposits. The origins of the zinc and magnetite deposits have rarely been considered together, but a genetic link is suggested by the occurrence of the Furnace magnetite bed and small magnetite lenses immediately beneath the Franklin zinc deposit. The Furnace bed was metamorphosed and deformed along with its enclosing rocks during the Grenvillian orogeny, obscuring the original mineralogy and obliterating the original rock fabrics. The present mineralogy is manganiferous magnetite plus calcite. Trace hydrous silicates, some coexisting with fluorite, have fluorine contents that are among the highest ever observed in natural assemblages. Furnace bed calcite has ??13C values of -5 ?? 1 per mil relative to Peedee belemnite (PDB) and ??18O values of 11 to 20 per mil relative to Vienna-standard mean ocean water (VSMOW). The isotopic compositions do not vary as expected for an original siderite layer that decarbonated during metamorphism, but they are consistent with nearly isochemical metamorphism of an iron oxide + calcite protolith that is chemically and minerlogically similar to iron-rich sediments found near the Red Sea brine pools and isotopically similar to Superior-type banded iron formations. Other magniferous magnite + calcite bodies occur at approximately the same stratigraphic position as far 50 km from the zinc deposits. A model is presented in which the iron and zinc deposits formed along the western edge of a Middle Proterozoic marine basin. Zinc was transported by sulfate-stable brines and was precipitated under sulfate-stable conditions as zincian carbonates and Fe-Mn-Zn oxides and silicates. Whether the zincian assemblages settled from the water column or formed by replacement reactions in shallowly buried sediments is uncertain. The iron deposits formed at interfaces between anoxic and oxygenated waters. The Furnace magnetite bed resulted from seawater oxidation of hydrothermally transported iron near a brine conduit. Iron deposits also formed regionally on the basin floor at the interface betveen anoxic deep waters and oxygenated shallower waters. These deposits include not only manganiferous magnetite + calcite bodies similar to the Furnace magnetite bed but also silicate-facies deposits that formed by iron oxide accumulation where detrital sediment was abundant. A basin margin model can be extended to Grenvillian stratiform deposits in the northwest Adirondacks of New York and the Mont Laurier basin of Quebec. In these areas iron deposits (pyrite or magnetite) are found basinward of marble-hosted sphalerite deposits, such as those in the Balmat-Edwards district. Whether the iron and zinc precipitated as sulfide assemblages or carbonate-oxide-silicate assemblages depended on whether sufficient organic matter or other reductants were available in local sediments or bottom waters to stabilize H2S.

New Jersey↗
USGS2017

Analysis of seafloor change around Dauphin Island, Alabama, 1987–2015

Dauphin Island is a 26-km-long barrier island located southwest of Mobile Bay, Alabama, in the north-central Gulf of Mexico. The island contains sandy beaches, dunes, maritime forests, freshwater ponds and intertidal wetlands, providing habitat for many endangered and threatened species. Dauphin Island also provides protection for and maintains estuarine conditions within Mississippi Sound, supporting oyster habitat and seagrasses. Wetland marshes along the Alabama mainland are protected by the island from wave-induced erosion during storms approaching from the Gulf of Mexico. Over the years, the island has been eroded by storms, most recently by Hurricane Ivan (2004) and Hurricane Katrina (2005) (Ivan/Katrina), which breached the island along its narrowest extent and caused damage to infrastructure. Along with storms producing significant episodic change, long-term beach erosion has exposed numerous pine tree stumps in the shoreface. The stumps are remnants of past maritime forests and reflect the consistent landward retreat of the island. Island change has prompted the State of Alabama to evaluate restoration alternatives to increase island resilience and sustainability by protecting and preserving the natural habitat, and by understanding the processes that influence shoreline change. Under a grant from the National Fish and Wildlife Foundation, restoration alternatives are being developed that will allow the State to make decisions on engineering and ecological restoration designs based on scientific analysis of likely outcomes and tradeoffs between impacts to stakeholder interests. Science-based assessment of the coastal zone requires accurate and up-to-date baseline data to provide a valid image of present conditions and to support modeling of coastal processes. Bathymetric elevation measurements are essential to this requirement. In August 2015, the U.S. Army Corps of Engineers and the U.S. Geological Survey conducted single beam and multibeam bathymetric surveys around Dauphin Island using a variety of shallow draft vessels and equipment. More than 95 square kilometers of seafloor was imaged. The data were integrated into a seamless digital elevation model to provide a high-resolution bathymetric map of the seafloor extending 9.5 kilometers seaward from the island’s eastern end and approximately 2 km along the rest of the island on the gulf and sound sides. Water depths range from 0.3 to 15.0 meters (m), with depths greater than 10.0 m constrained to the Mobile ship channel on the extreme eastern flank of the coverage. To measure seafloor change, two periods of historic hydrographic survey data were acquired from the National Oceanic and Atmospheric Administration National Centers for Environmental Information data archive. The two timeframes (1987–1988 and 2005–2007) were selected for their completeness of spatial coverage and because they encompass a period of significant storm impacts to the island. These timeframes were compared to each other and with the 2015 dataset to monitor elevation gain (sediment accretion) and elevation loss (sediment erosion) over time. Sediment dynamics is by far the most significant driver of nearshore elevation change in this area. The Mississippi-Alabama inner shelf is a passive margin, and other influences on elevation change (for example, tectonic adjustment, Holocene subsidence, and eustatic sea-level rise) are neither significant nor variable enough over this time period to have an imprint.

Alabama↗
USGS2001

Critical habitat for ovigerous Dungeness crabs

The Dungeness crab, Cancer magister , supports an important fishery in the northeastern Pacific Ocean, yet there is limited knowledge of ovigerous female brooding locations and brooding behavior. Our earlier research suggests that ovigerous crabs aggregate at the same brooding locations for many years. Within these locations, ovigerous females occur in high densities, with the majority of the aggregation buried within the sediment. These locations often have similar water depths and sediment types and appear to be critical for this life history stage. Our study was designed to examine the bathymetric distribution of Dungeness crabs in bays with and without sea otters at eight locations within the Glacier Bay area by conducting transects with a video-equipped manned submersible. Two of the bays investigated contained large aggregations of ovigerous females. At both sites the substrate was composed primarily of sand. However, only a small percentage of the 33 km of transects were classified as sand. These data suggest that sand substrate may be a limiting resource. Since crab brooding aggregations represent a large portion of the crab population within a small area, and because they are a critical component of Dungeness life history, areas with these characteristics need to be investigated, mapped, and protected from development or exploitation. The areas requiring protection from the impact of anthropogenic wastes, fishing, and logging activities could be quite small, thus limiting conflict with alternative users.

Conference Paper↗