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Probability of detecting atrazine/desethyl-atrazine and elevated concentrations of nitrate plus nitrate as nitrogen in ground water in the Idaho part of the western Snake River Plain

As ground water continues to provide an ever-growing proportion of Idaho?s drinking water, concerns about the quality of that resource are increasing. Pesticides (most commonly, atrazine/desethyl-atrazine, hereafter referred to as atrazine) and nitrite plus nitrate as nitrogen (hereafter referred to as nitrate) have been detected in many aquifers in the State. To provide a sound hydrogeologic basis for atrazine and nitrate management in southern Idaho—the largest region of land and water use in the State—the U.S. Geological Survey produced maps showing the probability of detecting these contaminants in ground water in the upper Snake River Basin (published in a 1998 report) and the western Snake River Plain (published in this report). The atrazine probability map for the western Snake River Plain was constructed by overlaying ground-water quality data with hydrogeologic and anthropogenic data in a geographic information system (GIS). A data set was produced in which each well had corresponding information on land use, geology, precipitation, soil characteristics, regional depth to ground water, well depth, water level, and atrazine use. These data were analyzed by logistic regression using a statistical software package. Several preliminary multivariate models were developed and those that best predicted the detection of atrazine were selected. The multivariate models then were entered into a GIS and the probability maps were produced. Land use, precipitation, soil hydrologic group, and well depth were significantly correlated with atrazine detections in the western Snake River Plain. These variables also were important in the 1998 probability study of the upper Snake River Basin. The effectiveness of the probability models for atrazine might be improved if more detailed data were available for atrazine application. A preliminary atrazine probability map for the entire Snake River Plain in Idaho, based on a data set representing that region, also was produced. In areas where this map overlaps the 1998 map of the upper Snake River Basin, the two maps show broadly similar probabilities of detecting atrazine. Logistic regression also was used to develop a preliminary statistical model that predicts the probability of detecting elevated nitrate in the western Snake River Plain. A nitrate probability map was produced from this model. Results showed that elevated nitrate concentrations were correlated with land use, soil organic content, well depth, and water level. Detailed information on nitrate input, specifically fertilizer application, might have improved the effectiveness of this model.

Idaho↗

The practice of prediction: What can ecologists learn from applied, ecology-related fields?

The pervasive influence of human induced global environmental change affects biodiversity across the globe, and there is great uncertainty as to how the biosphere will react on short and longer time scales. To adapt to what the future holds and to manage the impacts of global change, scientists need to predict the expected effects with some confidence and communicate these predictions to policy makers. However, recent reviews found that we currently lack a clear understanding of how predictable ecology is, with views seeing it as mostly unpredictable to potentially predictable, at least over short time frames. However, in applied, ecology-related fields predictions are more commonly formulated and reported, as well as evaluated in hindsight, potentially allowing one to define baselines of predictive proficiency in these fields. We searched the literature for representative case studies in these fields and collected information about modeling approaches, target variables of prediction, predictive proficiency achieved, as well as the availability of data to parameterize predictive models. We find that some fields such as epidemiology achieve high predictive proficiency, but even in the more predictive fields proficiency is evaluated in different ways. Both phenomenological and mechanistic approaches are used in most fields, but differences are often small, with no clear superiority of one approach over the other. Data availability is limiting in most fields, with long-term studies being rare and detailed data for parameterizing mechanistic models being in short supply. We suggest that ecologists adopt a more rigorous approach to report and assess predictive proficiency, and embrace the challenges of real world decision making to strengthen the practice of prediction in ecology.

Ecological Complexity↗

Evaluation of modeling for groundwater flow and tetrachloroethylene transport in the Milford-Souhegan glacial-drift aquifer at the Savage Municipal Well Superfund site, Milford, New Hampshire, 2011

The U.S. Geological Survey and the New Hampshire Department of Environmental Services entered into a cooperative agreement to assist in the evaluation of remedy simulations of the MSGD aquifer that are being performed by various parties to track the remedial progress of the PCE plume. This report summarizes findings from this evaluation. Topics covered include description of groundwater flow and transport models used in the study of the Savage Superfund site (section 2), evaluation of models and their results (section 3), testing of several new simulations (section 4), an assessment of the representation of models to simulate field conditions (section 5), and an assessment of models as a tool in remedial operational decision making (section 6).

New Hampshire↗

Bioaccumulation and toxicity of selenium during a life-cycle exposure with desert pupfish (Cyprinodon macularius)

Populations of desert pupfish ( Cyprinodon macularius ; pupfish), a federally-listed endangered species, inhabit irrigation drains in the Imperial Valley agricultural area of southern California. These drains have varying degrees of selenium (Se) contamination of water, sediment, and aquatic biota. Published Se toxicity studies suggest that these levels of Se contamination may pose risk of chronic toxicity to Se-sensitive fish, but until recently there have been no studies of the chronic toxicity of Se to desert pupfish. A life-cycle Se exposure with pupfish was conducted to estimate dietary and tissue thresholds for toxic effects of Se on all life stages. The dietary exposure was based on live oligochaete worms ( Lumbriculus variegatus ) dosed with Se by a laboratory food chain based on selenized yeast. Oligochaetes readily accumulated Se from mixtures of selenized and control yeasts. The protocol for dosing oligochaetes for pupfish feeding studies included long-term (at least 28 days) feeding of a low-ration of yeast mixtures to large batches of oligochaetes. Oligochaetes were dosed at five Se levels in a 50-percent dilution series. Pupfish were simultaneously fed Se-dosed oligochaetes and exposed to a series of Se concentrations in water (consisting of 85 percent selenate and 15 percent selenite) to produce exposures that were consistent with Se concentrations and speciation in pupfish habitats. The nutritional characteristics of oligochaete diets were consistent across the range of oligochaete Se concentrations tested. The life-cycle exposure started with laboratory-cultured juvenile pupfish that were exposed to Se through sexual maturation and reproduction (150 days; F0 exposure). The Se exposure continued with eggs, larvae, and juveniles produced by Se-exposed parents (79 days; F1 exposure). Selenium exposure (water and diets), Se bioaccumulation (whole-body and eggs), and toxicity endpoints (juvenile and adult survival and growth; egg production and hatching success, larval survival and deformities) were documented throughout the life-cycle study. Selenium concentrations in water (as much as 52 micrograms per liter [μg/L]) and diets (as much as 53 micrograms per gram [μg/g], on a dry weight basis) bracketed concentrations reported in pupfish habitats. Juvenile F0 pupfish rapidly accumulated Se and bioaccumulation models indicated that pupfish had reached more than 97 percent of maximum whole-body Se concentrations by the time they reached reproductive maturity. Adult pupfish accumulated whole-body Se concentrations that averaged about 40 percent of those in the oligochaete diets. Selenium concentrations in eggs and F1 juveniles were similar to or slightly greater than Se concentrations in F0 adults. Juvenile F0 pupfish contained selenomethionine fractions (62–71 percent of whole-body Se) greater than the average reported for wild pupfish from the Imperial Valley (53 percent). Selenium exposure had minimal effects on survival or growth of juvenile and adult pupfish. There was evidence of toxic effects on pupfish in the highest Se treatment (Se–5), including reduced growth of F0 and F1 juvenile pupfish (17–21 percent less than controls) on some sampling dates. These growth reductions did not persist to subsequent sampling dates, but reduced growth of F1 pupfish in the Se–5 treatment was associated with reduced survival (12 percent less than controls). Egg production was greatest in the controls and decreased with increasing Se exposure, reaching a minimum (51 percent less than controls) in the Se–4 treatment, but egg production was reduced by only 24 percent in the Se–5 treatment, a lesser reduction than in other Se treatments except Se–1. There was no statistically significant overall effect of Se treatment on mean pupfish egg production, reflecting large variation among replicates and among sampling dates. However, comparisons of daily mean egg production for 23 sampling dates indicated that egg production in each of 5 Se treatments was significantly less than controls on multiple (3–7) sampling dates, but no mean for any Se treatment was significantly greater than controls on any date. Significant reductions in daily egg production occurred mainly during the middle of the study and egg production increased in several Se treatments during the final 2 weeks of the study. These results suggest that pupfish egg production, although a highly variable endpoint, was adversely affected by elevated Se exposure. Neither egg hatching success nor survival of F1 larvae indicated clear evidence of Se toxicity. Egg hatching success did not differ significantly among treatments, with means ranging from 84–91 percent. The frequency of morphological deformities (primarily spinal deformities) was greater in larvae 10 days post-fertilization (dpf) from a preliminary reproduction study than in older larvae (14 dpf) from the main reproduction study. The frequency of larval deformities was generally greater in Se treatments than controls, but mean frequencies did not differ significantly among treatments. Survival of F1 larvae to 21 dpf was not reduced significantly by parental Se exposure, but the Se–5 treatment had the lowest larval survival (84 percent), and lowest combined egg hatching and larval survival (76 percent). Results of the Se treatments indicate that pupfish were insensitive to Se toxicity through most of their life cycle. Consistent toxic effects on survival and growth of juvenile and adult pupfish (defined as at least 10 percent reduction compared to controls) occurred only in treatment Se–5, which had a mean dietary Se concentration of 52 μg/g and a mean pupfish whole-body Se concentration of 27 μg/g. These apparent toxicity thresholds for growth and survival rank among the least sensitive chronic Se toxicity values reported for nonreproductive endpoints in freshwater fish. Comparisons of these thresholds to surveys of Se concentrations in the Imperial Valley suggest that risks of Se toxicity are low in pupfish habitats. The dietary threshold was about twice as high as the greatest mean Se concentrations reported in midge larvae from seven sites in the Imperial Valley. Whole-body thresholds were greater than mean whole-body Se concentrations reported for field-collected pupfish from three sites and for the sailfin molly (Poecilia latipinna), a potential bioaccumulation surrogate for pupfish, from seven sites. Reduced egg production, although highly variable, was the most sensitive response of pupfish to Se exposure. Toxic effects on egg production (reductions of 24–51 percent relative to controls) occurred in the four highest Se treatments, corresponding to reproductive toxicity thresholds of 7.3 μg/g for Se in diet, 3.4 μg/g in pupfish (whole body), and 4.4 μg/g in pupfish eggs. These thresholds are substantially lower than published Se toxicity values for reproductive effects in other freshwater fish (for example, 17–24 μg/g in eggs). Reduced egg production has not been reported as a sensitive endpoint in Se toxicity studies, although abnormal ovarian development has been reported in Se-exposed fish, and reduced egg production has been reported as a sensitive response of other Cyprinodon pupfish to other environmental stressors. Selenium concentrations in tissues of pupfish, mollies, and diet items from Imperial Valley sites frequently exceeded concentrations associated with reduced pupfish egg production in the laboratory study. Reduced egg production may limit the ability of pupfish populations to persist and recover in Se-contaminated habitats in the Imperial Valley and elsewhere in their limited range. However, these apparent risks of Se toxicity are not supported by recent surveys of desert pupfish populations in the Imperial Valley. These surveys indicated that desert pupfish made up a small, but variable, component of fish communities in Imperial Valley habitats, including sites with increased levels of Se exposure, and that pupfish distribution and population density indicated no clear relationships with Se concentrations in diets or fish tissues. Additional studies could determine the role of egg production in the maintenance and recovery of desert pupfish populations in Se-contaminated habitats.

Scientific Investigations Report↗

Hydrologic, Hydraulic, and Flood Analyses of the Blackberry Creek Watershed, Kendall County, Illinois

Results of the hydrologic model, flood-frequency, hydraulic model, and flood-hazard analysis of the Blackberry Creek watershed in Kendall County, Illinois, indicate that the 100-year and 500-year flood plains cover approximately 3,699 and 3,762 acres of land, respectively. On the basis of land-cover data for 2003, most of the land in the flood plains was cropland and residential land. Although many acres of residential land were included in the flood plain, this land was mostly lawns, with 25 homes within the 100-year flood plain, and 41 homes within the 500-year flood plain in the 2003 aerial photograph. This report describes the data collection activities to refine the hydrologic and hydraulic models used in an earlier study of the Kane County part of the Blackberry Creek watershed and to extend the flood-frequency analysis through water year 2003. The results of the flood-hazard analysis are presented in graphical and tabular form. The hydrologic model, Hydrological Simulation Program - FORTRAN (HSPF), was used to simulate continuous water movement through various land-use patterns in the watershed. Flood-frequency analysis was applied to an annual maximum series to determine flood quantiles in subbasins for flood-hazard analysis. The Hydrologic Engineering Center- River Analysis System (HEC-RAS) hydraulic model was used to determine the 100-year and 500-year flood elevations, and the 100-year floodway. The hydraulic model was calibrated and verified using observations during three storms at two crest-stage gages and the U.S. Geological Survey streamflowgaging station near Yorkville. Digital maps of the 100-year and 500-year flood plains and the 100-year floodway for each tributary and the main stem of Blackberry Creek were compiled.

Scientific Investigations Report↗

Surface complexation modeling for predicting solid phase arsenic concentrations in the sediments of the Mississippi River Valley alluvial aquifer, Arkansas, USA

The potential health impact of As in drinking water supply systems in the Mississippi River Valley alluvial aquifer in the state of Arkansas, USA is significant. In this context it is important to understand the occurrence, distribution and mobilization of As in the Mississippi River Valley alluvial aquifer. Application of surface complexation models (SCMs) to predict the sorption behavior of As and hydrous Fe oxides (HFO) in the laboratory has increased in the last decade. However, the application of SCMs to predict the sorption of As in natural sediments has not often been reported, and such applications are greatly constrained by the lack of site-specific model parameters. Attempts have been made to use SCMs considering a component additivity (CA) approach which accounts for relative abundances of pure phases in natural sediments, followed by the addition of SCM parameters individually for each phase. Although few reliable and internally consistent sorption databases related to HFO exist, the use of SCMs using laboratory-derived sorption databases to predict the mobility of As in natural sediments has increased. This study is an attempt to evaluate the ability of the SCMs using the geochemical code PHREEQC to predict solid phase As in the sediments of the Mississippi River Valley alluvial aquifer in Arkansas. The SCM option of the double-layer model (DLM) was simulated using ferrihydrite and goethite as sorbents quantified from chemical extractions, calculated surface-site densities, published surface properties, and published laboratory-derived sorption constants for the sorbents. The model results are satisfactory for shallow wells (10.6 m below ground surface), where the redox condition is relatively oxic or mildly suboxic. However, for the deep alluvial aquifer (21–36.6 m below ground surface) where the redox condition is suboxic to anoxic, the model results are unsatisfactory.

Arkansas↗

Statistics for stochastic modeling of volume reduction, hydrograph extension, and water-quality treatment by structural stormwater runoff best management practices (BMPs)

The U.S. Geological Survey (USGS) developed the Stochastic Empirical Loading and Dilution Model (SELDM) in cooperation with the Federal Highway Administration (FHWA) to indicate the risk for stormwater concentrations, flows, and loads to be above user-selected water-quality goals and the potential effectiveness of mitigation measures to reduce such risks. SELDM models the potential effect of mitigation measures by using Monte Carlo methods with statistics that approximate the net effects of structural and nonstructural best management practices (BMPs). In this report, structural BMPs are defined as the components of the drainage pathway between the source of runoff and a stormwater discharge location that affect the volume, timing, or quality of runoff. SELDM uses a simple stochastic statistical model of BMP performance to develop planning-level estimates of runoff-event characteristics. This statistical approach can be used to represent a single BMP or an assemblage of BMPs. The SELDM BMP-treatment module has provisions for stochastic modeling of three stormwater treatments: volume reduction, hydrograph extension, and water-quality treatment. In SELDM, these three treatment variables are modeled by using the trapezoidal distribution and the rank correlation with the associated highway-runoff variables. This report describes methods for calculating the trapezoidal-distribution statistics and rank correlation coefficients for stochastic modeling of volume reduction, hydrograph extension, and water-quality treatment by structural stormwater BMPs and provides the calculated values for these variables. This report also provides robust methods for estimating the minimum irreducible concentration (MIC), which is the lowest expected effluent concentration from a particular BMP site or a class of BMPs. These statistics are different from the statistics commonly used to characterize or compare BMPs. They are designed to provide a stochastic transfer function to approximate the quantity, duration, and quality of BMP effluent given the associated inflow values for a population of storm events. A database application and several spreadsheet tools are included in the digital media accompanying this report for further documentation of methods and for future use. In this study, analyses were done with data extracted from a modified copy of the January 2012 version of International Stormwater Best Management Practices Database, designated herein as the January 2012a version. Statistics for volume reduction, hydrograph extension, and water-quality treatment were developed with selected data. Sufficient data were available to estimate statistics for 5 to 10 BMP categories by using data from 40 to more than 165 monitoring sites. Water-quality treatment statistics were developed for 13 runoff-quality constituents commonly measured in highway and urban runoff studies including turbidity, sediment and solids; nutrients; total metals; organic carbon; and fecal coliforms. The medians of the best-fit statistics for each category were selected to construct generalized cumulative distribution functions for the three treatment variables. For volume reduction and hydrograph extension, interpretation of available data indicates that selection of a Spearman’s rho value that is the average of the median and maximum values for the BMP category may help generate realistic simulation results in SELDM. The median rho value may be selected to help generate realistic simulation results for water-quality treatment variables. MIC statistics were developed for 12 runoff-quality constituents commonly measured in highway and urban runoff studies by using data from 11 BMP categories and more than 167 monitoring sites. Four statistical techniques were applied for estimating MIC values with monitoring data from each site. These techniques produce a range of lower-bound estimates for each site. Four MIC estimators are proposed as alternatives for selecting a value from among the estimates from multiple sites. Correlation analysis indicates that the MIC estimates from multiple sites were weakly correlated with the geometric mean of inflow values, which indicates that there may be a qualitative or semiquantitative link between the inflow quality and the MIC. Correlations probably are weak because the MIC is influenced by the inflow water quality and the capability of each individual BMP site to reduce inflow concentrations.

Scientific Investigations Report↗

Community for Data Integration 2017 annual report

The Community for Data Integration (CDI) is a group that helps members grow their expertise on all aspects of working with scientific data. The CDI’s activities advance data and information integration capabilities in the U.S. Geological Survey and in the wider Earth and biological sciences. This annual report describes the presentations, activities, collaboration areas, workshop, and other CDI-sponsored events in fiscal year 2017. The report also describes the objectives of the 11 CDI-funded projects in fiscal year 2017. The report shows how the CDI activities fulfill the strategic objective of the U.S. Geological Survey’s Core Science Systems Mission Area to develop a workplace model for interdisciplinary science.

Open-File Report↗

Synthesis of studies in the fall low-salinity zone of the San Francisco Estuary, September-December 2011

In fall 2011, a large-scale investigation (fall low-salinity habitat investigation) was implemented by the Bureau of Reclamation in cooperation with the Interagency Ecological Program to explore hypotheses about the ecological role of low-salinity habitat in the San Francisco Estuary—specifically, hypotheses about the importance of fall low-salinity habitat to the biology of delta smelt Hypomesus transpacificus , a species endemic to the San Francisco Estuary and listed as threatened or endangered under federal and state endangered species legislation. The Interagency Ecological Program is a consortium of 10 agencies that work together to develop a better understanding of the ecology of the Estuary and the effects of the State Water Project and Federal Central Valley Project operations on the physical, chemical, and biological conditions of the San Francisco Estuary. The fall low-salinity habitat investigation constitutes one of the actions stipulated in the Reasonable and Prudent Alternative issued with the 2008 Biological Opinion of the U.S. Fish and Wildlife Service, which called for adaptive management of fall Sacramento-San Joaquin Delta outflow following “wet” and “above normal” water years to alleviate jeopardy to delta smelt and adverse modification of delta smelt critical habitat. The basic hypothesis of the adaptive management of fall low-salinity habitat is that greater outflows move the low-salinity zone (salinity 1–6), an important component of delta smelt habitat, westward and that moving the low-salinity zone westward of its position in the fall of recent years will benefit delta smelt, although the specific mechanisms providing such benefit are uncertain. An adaptive management plan was prepared to guide implementation of the adaptive management of fall low-salinity habitat and to reduce uncertainty. This report has three major objectives: • To provide a summary of the results from the first year of coordinated fall low-salinity habitat studies and monitoring. • To provide a synthesis of the results of the fall low-salinity habitat studies and other ongoing research and monitoring, to determine if the available information supports the hypotheses behind the adaptive management of fall low-salinity habitat as set forth in the adaptive management plan. • To begin to put the results from the fall low-salinity habitat studies into context within the larger body of knowledge regarding the San Francisco Estuary and, in particular, the upper San Francisco Estuary, including the Sacramento-San Joaquin Delta, Suisun Bay, and associated embayments. The basic approach of this report is to evaluate predictions derived from the hypotheses included in the conceptual model developed within the adaptive management plan. All available data from studies and monitoring conducted in fall 2011 and similar data from fall 2006, which was the most recent wet year preceding 2011, were considered. Data from 2005 and 2010 were also considered, to include the conditions antecedent to those years. Many of the predictions either could not be evaluated with the data available, or the needed data were not collected. Most of the predictions that could be addressed involved either the abiotic habitat components (that is, the physical environment) or delta smelt responses. In general, the fall low-salinity habitat investigation has been largely inconclusive as of the writing of this report. This is not to be unexpected in the first year of what is intended to be a multi-year adaptive-management effort. This report can be viewed as the first chapter of a “living document” that is to be continually updated as part of the adaptive management cycle. The results of this report, especially predictions with insufficient data for evaluation, indicate a number of science-based approaches to improve the fall low-salinity habitat investigations: • Develop a method of measuring “hydrodynamic complexity.” This concept is central to a number of the predictions that could not be evaluated. • Determine if wind speed warrants a stand-alone prediction. The wind-speed prediction is directly related to the turbidity predictions, and wind is only one of several factors important for determining turbidity. • Determine the correct spatial and temporal scale or scales necessary for monitoring and for studies to address the predicted abiotic and biotic responses. Many of the assessments in this report were based on monthly sampling of dynamic habitat components, such as phytoplankton and zooplankton populations, that can change on daily scales. • Address the nutrient predictions as part of developing a phytoplankton production model that includes nutrient cycling and other important processes, if feasible. At a minimum develop a mechanistic conceptual model to support more processed-based interpretations of data or design of new studies, rather than making simple predictions of increase or decrease. • Determine if studies of predation rates are feasible in areas where there are delta smelt.

California↗

The Unified Lunar Control Network 2005

This report documents a new general unified lunar control network and lunar topographic model based on a combination of Clementine images and a previous network derived from Earth-based & Apollo photographs, and Mariner 10, & Galileo images. This photogrammetric network solution is the largest planetary control network ever completed. It includes the determination of the 3-D positions of 272,931 points on the lunar surface and the correction of the camera angles for 43,866 Clementine images, using 546,126 tie point measurements. The solution RMS is 20 μm (= 0.9 pixels) in the image plane, with the largest residual of 6.4 pixels. The explanation given here, along with the accompanying files, comprises the release of the network information and of global lunar digital elevation models (DEMs) derived from the network. A paper that will describe the solution and network in further detail will be submitted to a refereed journal, and will include additional background information, solution details, discussion of accuracy and precision, and explanatory figures.

Open-File Report↗

Implications of NGA for NEHRP site coefficients

Three proposals are provided to update tables 11.4-1 and 11.4-2 of Minimum Design Loads for Buildings and Other Structures (7-10), by the American Society of Civil Engineers (2010) (ASCE/SEI 7-10), with site coefficients implied directly by NGA (Next Generation Attenuation) ground motion prediction equations (GMPEs). Proposals include a recommendation to use straight-line interpolation to infer site coefficients at intermediate values of ̅v s (average shear velocity). Site coefficients are recommended to ensure consistency with ASCE/SEI 7-10 MCE R (Maximum Considered Earthquake) seismic-design maps and simplified site-specific design spectra procedures requiring site classes with associated tabulated site coefficients and a reference site class with unity site coefficients. Recommended site coefficients are confirmed by independent observations of average site amplification coefficients inferred with respect to an average ground condition consistent with that used for the MCE R maps. The NGA coefficients recommended for consideration are implied directly by the NGA GMPEs and do not require introduction of additional models.

Open-File Report↗

Survival of bacterial indicators and the functional diversity of native microbial communities in the Floridan aquifer system, south Florida

The Upper Floridan aquifer in the southern region of Florida is a multi-use, regional scale aquifer that is used as a potable water source and as a repository for passively recharged untreated surface waters, and injected treated surface water and wastewater, industrial wastes, including those which contain greenhouse gases (for example, carbon dioxide). The presence of confined zones within the Floridan aquifer that range in salinity from fresh to brackish allow regulatory agencies to permit the injection of these different types of product waters into specific zones without detrimental effects to humans and terrestrial and aquatic ecosystems. The type of recharge that has received the most regulatory attention in south Florida is aquifer storage and recovery (ASR). The treated water, prior to injection and during recovery, must meet primary and secondary drinking water standards. The primary microbiology drinking water standard is total coliforms, which have been shown to be difficult to inactivate below the regulatory standard during the treatment process at some ASR facilities. The inefficient inactivation of this group of indicator bacteria permits their direct injection into the storage zones of the Floridan aquifer. Prior to this study, the inactivation rates for any member of the total coliform group during exposure to native geochemical conditions in groundwater from any zone of the Floridan aquifer had not been derived. Aboveground flow through mesocosms and diffusion chambers were used to quantify the inactivation rates of two bacterial indicators, Escherichia coli and Pseudomonas aeruginosa, during exposure to groundwater from six wells. These wells collect water from two ASR storage zones: the Upper Floridan aquifer (UFA) and Avon Park Permeable Zone (APPZ). Both bacterial strains followed a biphasic inactivation model. The E. coli populations had slower inactivation rates in the UFA (range: 0.217–0.628 per hour (h -1 )) during the first phase of the model than when exposed to groundwater from the APPZ (range: 0.540–0.684 h -1 ). The inactivation rates for the first phase of the models for P. aeruginosa were not significantly different between the UFA (range: 0.144–0.770 h -1 ) and APPZ (range: 0.159–0.772 h -1 ) aquifer zones. The inactivation rates for the second phase of the model for this P. aeruginosa were also similar between UFA (range: 0.003–0.008 h -1 ) and APPZ (0.004–0.005 h -1 ) zones, although significantly slower than the model’s first phase rates for this bacterial species. Geochemical data were used to determine which dissimilatory biogeochemical reactions were most likely to occur under the native conditions in the UFA and APPZ zones using thermodynamics principles to calculate free energy yields and other cell-related energetics data. The biogeochemical processes of acetotrophic and hydrogenotrophic sulfate reduction, methanogenesis and anaerobic oxidation of methane dominated in all six groundwater sites. A high throughput DNA microarray sequencing technology was used to characterize the diversity in the native aquifer bacterial communities (bacteria and archaea) and assign putative physiological capabilities to the members of those communities. The bacterial communities in both zones of the aquifer were shown to possess the capabilities for primary and secondary fermentation, acetogenesis, methanogenesis, anaerobic methane oxidation, syntrophy with methanogens, ammonification, and sulfate reduction. The data from this study provide the first determination of bacterial indicator survival during exposure to native geochemical conditions of the Floridan aquifer in south Florida. Additionally, the energetics and functional bacterial diversity characterizations are the first descriptions of native bacterial communities in this region of the Floridan aquifer and reveal how these communities persist under such extreme conditions. Collectively, these types of data can be used to develop and refine groundwater models.

Florida↗

Nitrogen loads from selected rivers in the Long Island Sound Basin, 2005–13, Connecticut and Massachusetts

Total nitrogen loads at 14 water-quality monitoring stations were calculated by using discrete measurements of total nitrogen and continuous streamflow data for the period 2005–13 (water years 2006–13). Total nitrogen loads were calculated by using the LOADEST computer program. Overall, for water years 2006–13, streamflow in Connecticut was generally above normal. Total nitrogen yields ranged from 1,160 to 23,330 pounds per square mile per year. Total nitrogen loads from the French River at North Grosvenordale and the Still River at Brookfield Center, Connecticut, declined noticeably during the study period. An analysis of the bias in estimated loads indicated unbiased results at all but one station, indicating generally good fit for the LOADEST models.

Connecticut, Massachusetts↗

An evaluation of 20th century climate for the Southeastern United States as simulated by Coupled Model Intercomparison Project Phase 5 (CMIP5) global climate models

The 20th century climate for the Southeastern United States and surrounding areas as simulated by global climate models used in the Coupled Model Intercomparison Project Phase 5 (CMIP5) was evaluated. A suite of statistics that characterize various aspects of the regional climate was calculated from both model simulations and observation-based datasets. CMIP5 global climate models were ranked by their ability to reproduce the observed climate. Differences in the performance of the models between regions of the United States (the Southeastern and Northwestern United States) warrant a regional-scale assessment of CMIP5 models.

Open-File Report↗

Mathematical model of gamma-ray spectrometry borehole logging for quantitative analysis

A technique for analyzing gamma-ray spectral-logging data has been developed, in which a digital computer is used to calculate the effects of gamma-ray attentuation in a borehole environment. The computer model allows for the calculation of the effects of lithology, porosity, density, and the thickness of a horizontal layer of uniformly distributed radioactive material surrounding a centralized probe in a cylindrical borehole. The computer program also contains parameters for the calculation of the effects of well casing, drilling fluid, probe housing, and losses through the sodium-iodide crystal. Errors associated with the commonly used mathematical assumption of a point detector are eliminated in this model. (USGS)

Open-File Report↗

Ground-water-level monitoring network, Hollister and San Juan Valleys, San Benito County, California

The addition of 17 wells to the existing 86-well network is proposed to improve the ground-water monitoring in the Hollister and San Juan Valleys in California. The new wells were selected on the basis of well-construction data, availability, location, accessibility, use, and condition, either to replace wells that are no longer accessible or to furnish needed additional data for planning artificial recharge, preparing water-level-contour maps, and digital ground-water modeling.

California↗

Numerical Simulation of the Hydrologic Effects of Redistributed and Additional Ground-Water Withdrawal, Island of Molokai, Hawaii

Because of increased demand for water associated with a growing population, projected increases in demand over the next few decades, and rising salinity of the water pumped from some existing wells, the County of Maui Department of Water Supply (DWS) is currently (2006) considering drilling additional wells to replace or supplement existing wells on the Island of Molokai, Hawaii. Redistributed and additional ground-water withdrawals will affect ground-water levels, discharge of ground water to the nearshore environment, and, possibly, salinity of the water pumped from existing wells. For this study, an existing numerical ground-water-flow model was used to estimate water-level and coastal-discharge changes, relative to 2005 base-case conditions, caused by withdrawals in the area between Kualapuu and Ualapue on Molokai. For most of the scenarios tested, total withdrawals were either equal to or 0.28 million gallons per day greater than those in the 2005 base case. Model results indicate that a redistribution of withdrawals causes a corresponding redistribution of water levels and coastal discharge. Water levels rise and coastal discharge increases near sites of reduced withdrawal, whereas water levels decline and coastal discharge decreases near sites of increased withdrawal. The magnitude and areal extent of hydrologic changes caused by a redistribution of withdrawals increase with larger changes in withdrawal rates. Simulated water-level changes are greatest at withdrawal sites and decrease outward with distance elsewhere. Simulated water-level declines at proposed withdrawal sites generally were less than 0.5 feet. The low-permeability dike complex of East Molokai Volcano impedes the spread of water-level changes to perennial streams in the northeastern part of the island, and discharge to these streams in the dike complex therefore is unaffected by the proposed withdrawals. Simulated coastal-discharge changes generally are greatest immediately downgradient from sites of withdrawal change. Simulated coastal-discharge reductions generally are less than 30,000 gallons per day (and everywhere less than 75,000 gallons per day) within model elements for scenarios that exclude the Hawaii Department of Hawaiian Home Lands reservation (2.905 million gallons per day). (Model elements cover discrete 1,640-feet by 1,640-feet square areas.) Simulated coastal-discharge reductions generally represent less than 5 percent change relative to 2005 base-case conditions. Simulated discharge to some fishponds and springs increased in response to decreased withdrawal at upgradient sites, and simulated discharge to other fishponds and springs decreased in response to increased withdrawal. Simulated water-level declines associated with the Hawaii Department of Hawaiian Home Lands reservation were as much as 4 feet at three arbitrarily selected withdrawal sites, and simulated reductions in coastal discharge between Umipaa and Kamiloloa along the south coast exceeded 200,000 gallons per day from several model elements.

Scientific Investigations Report↗

Hydrogeology and results of tracer tests at the old Tampa well field in Hillsborough County, with implications for wellhead-protection strategies in west-central Florida

Wellhead-protection strategies were evaluated for the Upper Floridan aquifer of west-central Florida using the old Tampa well field in northeastern Hillsborough County, Florida, as a test site. The upper 400 feet of the Upper Floridan aquifer responded to pumping as an equivalent, porous medium for a range of discharge rates from 450 to 1,000 gallons per minute. Transmissivity and storage coefficient values determined for the Upper Floridan aquifer were 23,000 feet squared per day and 0.0001, respectively. Rock cores from the Upper Floridan aquifer have effective porosity values from 21 to 46 percent. Tracer tests were conducted using a fluorescent dye. A bimodal distribution of tracer arrival times indicates ground-water flow through a dual porosity system. Analysis of tracer test results an effective porosity of 25 percent and a longitudinal dispersivity of 1.3 feet for the aquifer matrix. A numerical aquifer-simulation equivalent porous media model of the Upper Floridan aquifer was calibrated using results of aquifer tests. A particle-tracking program was used to simulate the matrix flow groundwater travel time measured with the fluorescent dye tracer test. An evaluation of wellhead-protection strategies was conducted using the particle-tracking program to simulate areas of contribution from the aquifer matrix. The results of this study demonstrate the heterogeneity of the Upper Floridan aquifer. Because of this heterogeneity, the use of uniform porosity models to delineate time-related areas of wellhead protection in the karst Upper Floridan aquifer is inappropriate; however, ground-water movement in the aquifer matrix can be simulated with uniform porosity models.

Water-Resources Investigations Report↗