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USGS2010

Alternative aircraft anti-icing formulations with reduced aquatic toxicity and biochemical oxygen demand

The current research was conducted to identify alternative aircraft and pavement deicer and anti-icer formulations with improved environmental characteristics compared to currently used commercial products (2007). The environmental characteristics of primary concern are the biochemical oxygen demand (BOD) and aquatic toxicity of the fully formulated products. Except when the distinction among products is necessary for clarity, “deicer” will refer to aircraft-deicing fluids (ADFs), aircraft anti-icing fluids (AAFs), and pavementdeicing materials (PDMs).

Report↗

USGS2021

Informing future condition scenario planning for habitat specialists of the imperiled pine rockland ecosystem of South Florida

This project evaluated habitat conditions for two species found in the imperiled pine rockland ecosystem—the Rim Rock Crowned Snake ( Tantilla oolitica ) and the Key Ring-Necked Snake ( Diadophis punctatus acricus ). The Rim Rock Crowned Snake historically occurred in eastern Miami-Dade County (hereafter, mainland) as well as throughout the Florida Keys, whereas the Key Ring-Necked Snake occurs only in lower Florida Keys (Enge et al. 2004; Mays and Enge 2016). Both species are very elusive, small (< 20 cm in length) and primarily fossorial. Pine rockland habitat is rapidly disappearing in South Florida, with < 3 percent of its original extent remaining. Saltwater intrusion from hurricanes and sea-level rise (SLR), and human development pose the greatest threats to the longevity of this ecosystem which, in turn, places species that are endemic to this unique habitat at risk of extinction. The Rim Rock Crowned Snake and the Key Ringed-Necked Snake are being considered for listing by the U.S. Fish and Wildlife Service (USFWS). To aid the agency’s decision, it must be able to forecast species’ responses to potential future environmental conditions, as well as to different conservation and management actions. Yet, the information needed to complete these forecasts—such as population trends, life history traits, habitat use, and future land use and climate conditions—is often lacking for most rare species. This is especially problematic for assessments of species resiliency to changes in climate and land use. When these types of data are lacking, information on habitat quality can be used to help determine how a species will respond to change. First, this project gathered current and historical records for both species from various sources such as museum specimens, inventories, and other personal account. Then, we identified potential future changes in habitat that could result from different management actions, such as habitat acquisition or restoration, and environmental conditions, such as changes in the frequency and intensity of tropical storms and rates of SLR. Researchers then explored the potential impacts of these habitat condition changes on the Rim Rock Crowned Snake and Key Ring-Necked Snake. This information can be used by the USFWS to help make decisions about the need to protect these species under the Endangered Species Act and could inform the conservation, management, and recovery of other at-risk species found in the pine rockland ecosystem. This work supports the Secretary of Interior’s priority to create a conservation stewardship legacy by using science to identify best practices to manage land and water resource and adapt to changes in the environment.

Florida↗

USGS2011

The fecal bacteria

The Fecal Bacteria offers a balanced, integrated discussion of fecal bacteria and their presence and ecology in the intestinal tract of mammals, in the environment, and in the food supply. This new volume covers their use in examining and assessing water quality in order to offer protection from illnesses related to swimming in or ingesting contaminated water, in addition to discussing their use in engineering considerations of water quality, modeling, monitoring, and regulations. Fecal bacteria are additionally used as indicators of contamination of ready-to-eat foods and fresh produce. The intestinal environment, the microbial community structure of the gut microbiota, and the physiology and genomics of this broad group of microorganisms are explored in the book. With contributions from an internationally recognized group of experts, the book integrates medicine, public health, environmental, and microbiological topics in order to provide a unique, holistic understanding of fecal bacteria. Moreover, it shows how the latest basic science and applied research findings are helping to solve problems and develop effective management strategies. For example, readers will discover how the latest tools and molecular approaches have led to our current understanding of fecal bacteria and enabled us to improve human health and water quality. The Fecal Bacteria is recommended for microbiologists, clinicians, animal scientists, engineers, environmental scientists, food safety experts, water quality managers, and students. It will help them better understand fecal bacteria and use their knowledge to protect human and environmental health. They can also apply many of the techniques and molecular tools discussed in this book to the study of a broad range of microorganisms in a variety of habitats.

Book↗

USGS2018

Informing our successors: What botanical information for Santa Cruz Island will researchers and conservation managers in the century ahead need the most?

Climate changes are predicted to drive changes in plant species composition and vegetation cover around the world. Preserved specimens and other botanical information that we gather today—a period future practitioners may look back on as an early stage of modern anthropogenic climate change—will be of value to conservation managers and conservation biologists in the decades and centuries ahead. Here, we present suggestions for the systematic collection, long-term curation (in museums, herbaria, and other research institutions), and maintenance of plant specimens, along with associated data and analyses on the plants and vegetation present today and in the past. The primary aim of this systematic survey is to provide information of high value to conservation researchers and managers both in the near term (the next several years) and through the century to come. Such a systematic survey would build on a strong foundation of research and adaptive management on the island. It would fill gaps in less well-studied groups of organisms and identify environmental, ecological, and cultural factors related to current patterns of distribution. It would also archive previously collected data, photographs, and other materials which would otherwise gradually degrade and become inaccessible. As a case study, we use Santa Cruz Island, California, which is managed for conservation. We are confident that the same approach may be applied to other lands and waters around the world. We argue that there is a particular need to collect and archive herbarium specimens and seeds from today's populations, activities largely overlooked in recent decades. We encourage conservation researchers and managers to consider what information will be most important for future managers and to help launch studies, monitoring programs, and collections to prepare their successors for success.

Western North American Naturalist↗

USGS2002

Antimicrobial residues in animal waste and water resources proximal to large-scale swine and poultry feeding operations

Expansion and intensification of large-scale animal feeding operations (AFOs) in the United States has resulted in concern about environmental contamination and its potential public health impacts. The objective of this investigation was to obtain background data on a broad profile of antimicrobial residues in animal wastes and surface water and groundwater proximal to large-scale swine and poultry operations. The samples were measured for antimicrobial compounds using both radioimmunoassay and liquid chromatography/electrospray ionization-mass spectrometry (LC/ESI-MS) techniques. Multiple classes of antimicrobial compounds (commonly at concentrations of >100 μg/l) were detected in swine waste storage lagoons. In addition, multiple classes of antimicrobial compounds were detected in surface and groundwater samples collected proximal to the swine and poultry farms. This information indicates that animal waste used as fertilizer for crops may serve as a source of antimicrobial residues for the environment. Further research is required to determine if the levels of antimicrobials detected in this study are of consequence to human and/or environmental ecosystems. A comparison of the radioimmunoassay and LC/ESI-MS analytical methods documented that radioimmunoassay techniques were only appropriate for measuring residues in animal waste samples likely to contain high levels of antimicrobials. More sensitive LC/ESI-MS techniques are required in environmental samples, where low levels of antimicrobial residues are more likely.

Science of the Total Environment↗

USGS2025

Near-surface geophysics: Environmental applications

The field of geophysics encompasses a broad and diverse compilation of methodologies that employs principles of physics to characterize properties of earth materials within the subsurface. While geophysical methods have a long history in resource exploration and studies of Earth’s interior, the subdiscipline of “near-surface geophysics” has evolved in recent decades for examination of the shallow, near-surface environment for a range of purposes ranging from archaeological or forensic investigations to assessment of geologic, hydrologic, biologic, and geochemical properties and processes. “Environmental geophysics” are near-surface geophysical studies and methods that focus on understanding natural systems (e.g., watershed hydrology, groundwater–surface water connections, biophysical processes) as well as research pertaining to anthropogenic impacts and land management, (e.g., contamination and remediation, saltwater intrusion, agricultural practices). This field can be further subdivided into subdisciplines focused on specific topics and applications, such as water resources and hydrology (hydrogeophysics) or biologic and microbial processes (biogeophysics). Studies in environmental geophysics span a range of scales, from pore-scale laboratory tests to watershed-scale or regional field experiments. Methods vary by the nature of physics employed, the specific measurement acquired, and how that data is ultimately processed and analyzed to produce interpretable results. There exists further diversity in the acquisition logistics, geometry, and timing of data collection. Geophysical data can be collected in boreholes (one-dimensional, 1-D, vertical profiles), along survey lines (two-dimensional, 2-D, cross-sections), or in dense sensor arrays or gridded profiles (three-dimensional, 3-D, models). Regarding the temporal aspect, studies can conduct one-time geophysical surveys to obtain detailed imaging of subsurface structure or use timelapse and continuous monitoring to investigate variations in subsurface properties over time. The cumulation of all possible permutations of these factors (method, acquisition geometry, survey design, and target application) results in an immense diversity among environmental geophysical studies. Nevertheless, this field remains unified in the pursuit of understanding natural and human-impacted near-surface environments through geophysical investigations. Here we highlight some key references within environmental geophysics. Resources on geophysical theory, acquisition logistics, processing and inversion workflows, and example case studies are categorized into the most common geophysical classes within Geophysical Methods. Lastly, example references for the dominant types of applications in environmental geophysical studies are catalogued in Environmental Applications.

Book chapter↗

USGS2008

Linking environmental risk assessment and communication: An experiment in co-evolving scientific and social knowledge

Dissemination of information to decision-makers and enhanced methods of public participation are often put forward as antidotes to a perceived disconnect between risk assessment and risk communication in the public domain. However, mechanisms that support both the provision of routine, timely and relevant technical knowledge to the public and meaningful opportunities for public participation in the evaluation and management of risk are few. We argue for the need to re-conceptualise the institutional context in which risk research and communication occur as one in which scientific knowledge and public understanding are co-evolutionary instead of independent or sequential. Here, we report on an experiment to promote coevolution of environmental risk assessment and risk communication through the instrumental use of a web-based platform that dynamically links expert and public discourses through common information sources, linked scenario evaluations, and opportunities for iterative dialogue. On the basis of technical feasibility, research value and public communication capacity, we conclude that there is potential for further refinement of the methodologies presented here. Copyright ?? 2008 Inderscience Enterprises Ltd.

International Journal of Global Environmental Issu↗

USGS2022

A framework to integrate innovations in invasion science for proactive management

Invasive alien species (IAS) are a rising threat to biodiversity, national security, and regional economies, with impacts in the hundreds of billions of U.S. dollars annually. Proactive or predictive approaches guided by scientific knowledge are essential to keeping pace with growing impacts of invasions under climate change. Although the rapid development of diverse technologies and approaches has produced tools with the potential to greatly accelerate invasion research and management, innovation has far outpaced implementation and coordination. Technological and methodological syntheses are urgently needed to close the growing implementation gap and facilitate interdisciplinary collaboration and synergy among evolving disciplines. A broad review is necessary to demonstrate the utility and relevance of work in diverse fields to generate actionable science for the ongoing invasion crisis. Here, we review such advances in relevant fields including remote sensing, epidemiology, big data analytics, environmental DNA (eDNA) sampling, genomics, and others, and present a generalized framework for distilling existing and emerging data into products for proactive IAS research and management. This integrated workflow provides a pathway for scientists and practitioners in diverse disciplines to contribute to applied invasion biology in a coordinated, synergistic, and scalable manner.

Biological Reviews↗

USGS2022

Getting ahead of flash drought: From early warning to early action

Flash droughts, characterized by their unusually rapid intensification, have garnered increasing attention within the weather, climate, agriculture, and ecological communities in recent years due to their large environmental and socioeconomic impacts. Because flash droughts intensify quickly, they require different early warning capabilities and management approaches than are typically used for slower-developing “conventional” droughts. In this essay, we describe an integrated research-and-applications agenda that emphasizes the need to reconceptualize our understanding of flash drought within existing drought early warning systems by focusing on opportunities to improve monitoring and prediction. We illustrate the need for engagement among physical scientists, social scientists, operational monitoring and forecast centers, practitioners, and policy-makers to inform how they view, monitor, predict, plan for, and respond to flash drought. We discuss five related topics that together constitute the pillars of a robust flash drought early warning system, including the development of 1) a physically based identification framework, 2) comprehensive drought monitoring capabilities, and 3) improved prediction over various time scales that together 4) aid impact assessments and 5) guide decision-making and policy. We provide specific recommendations to illustrate how this fivefold approach could be used to enhance decision-making capabilities of practitioners, develop new areas of research, and provide guidance to policy-makers attempting to account for flash drought in drought preparedness and response plans.

Bulletin of American Meteorological Society (BAMS)↗

USGS2014

Geomorphological Fieldwork

Geomorphological Fieldwork addresses a topic that always remains popular within the geosciences and environmental science. More specifically, the volume conveys a growing legacy of field-based learning for young geomorphologists that can be used as a student book for field-based university courses and postgraduate research requiring fieldwork or field schools. The editors have much experience of field-based learning within geomorphology and extend this to physical geography. The topics covered are relevant to basic geomorphology as well as applied approaches in environmental and cultural geomorphology. The book integrates a physical-human approach to geography, but focuses on physical geography and geomorphology from an integrated field-based geoscience perspective.

Book↗

USGS2016

Surficial geological tools in fluvial geomorphology: Chapter 2

Increasingly, environmental scientists are being asked to develop an understanding of how rivers and streams have been altered by environmental stresses, whether rivers are subject to physical or chemical hazards, how they can be restored, and how they will respond to future environmental change. These questions present substantive challenges to the discipline of fluvial geomorphology, especially since decades of geomorphologic research have demonstrated the general complexity of fluvial systems. It follows from the concept of complex response that synoptic and short-term historical views of rivers will often give misleading understanding of future behavior. Nevertheless, broadly trained geomorphologists can address questions involving complex natural systems by drawing from a tool box that commonly includes the principles and methods of geology, hydrology, hydraulics, engineering, and ecology.

Book chapter↗

USGS1991

Acute toxicity of four anticholinesterase insecticides to American kestrels, eastern screech-owls and northern bobwhites

American kestrels (Falco sparverius), eastern screech-owls (Otus asio), and northern bobwhites (Colinus virginianus) were given single acute oral doses of four widely diverse anticholinesterase pesticides: EPN, fenthion, carbofuran, and monocrotophos. LD50s, based on birds that died within 5 d of dosage, were computed for each chemical in each species. Sex differences in the sensitivity of northern bobwhites in reproductive condition were examined. American kestrels were highly sensitive to all chemicals tested (LD50s 0.6--4.0 mg/kg). Eastern screech-owls were highly tolerant to EPN (LD50 274 mg/kg) but sensitive to the remaining chemicals (LD50s 1.5-3.9 mg/kg). Northern bobwhites were highly sensitive to monocrotophos (LD50 0.8 mg/kg) and less sensitive to the remaining chemicals (LD50s 4.6--31 mg/kg). Female bobwhites (LD50 3.1 mg/kg) were more sensitive to fenthion than males (LD50 7.0 mg/kg). Mean percent depression of brain cho[inesterase (ChE) of birds that died on the day of dosing exceeded 65% for all chemicals in all species. The response of one species to a given pesticide should not be used to predict the sensitivity of other species to the same pesticide. The need for research on several topics is discussed

Environmental Toxicology and Chemistry↗

USGS2015

Using biotic ligand models to predict metal toxicity in mineralized systems

The biotic ligand model (BLM) is a numerical approach that couples chemical speciation calculations with toxicological information to predict the toxicity of aquatic metals. This approach was proposed as an alternative to expensive toxicological testing, and the U.S. Environmental Protection Agency incorporated the BLM into the 2007 revised aquatic life ambient freshwater quality criteria for Cu. Research BLMs for Ag, Ni, Pb, and Zn are also available, and many other BLMs are under development. Current BLMs are limited to ‘one metal, one organism’ considerations. Although the BLM generally is an improvement over previous approaches to determining water quality criteria, there are several challenges in implementing the BLM, particularly at mined and mineralized sites. These challenges include: (1) historically incomplete datasets for BLM input parameters, especially dissolved organic carbon (DOC), (2) several concerns about DOC, such as DOC fractionation in Fe- and Al-rich systems and differences in DOC quality that result in variations in metal-binding affinities, (3) water-quality parameters and resulting metal-toxicity predictions that are temporally and spatially dependent, (4) additional influences on metal bioavailability, such as multiple metal toxicity, dietary metal toxicity, and competition among organisms or metals, (5) potential importance of metal interactions with solid or gas phases and/or kinetically controlled reactions, and (6) tolerance to metal toxicity observed for aquatic organisms living in areas with elevated metal concentrations.

Applied Geochemistry↗

USGS2019

A Generalized Additive Model approach to evaluating water quality: Chesapeake Bay Case Study

Nutrient-reduction efforts have been undertaken in recent decades to mitigate the impacts of eutrophication in coastal and estuarine systems worldwide. To track progress in response to one of these efforts we use Generalized Additive Models (GAMs) to evaluate a diverse suite of water quality constituents over a 32-year period in the Chesapeake Bay, an estuary on the east coast of the United States. Model development included selecting a GAM structure to describe nonlinear seasonally-varying changes over time, incorporating hydrologic variability via either river flow or salinity, and using interventions to model method or laboratory changes suspected to impact data. This approach, transferable to other systems, allows for evaluation of water quality data in a statistically rigorous way, while being suitable for application to many sites and variables. This enables consistent generation of annual updates, while providing a tool for developing insights to a range of management- and research-focused questions.

Chesapeake Bay↗

USGS2020

Ancient Egyptian mummified shrews (Mammalia: Eulipotyphla: Soricidae) and mice (Rodentia: Muridae) from the Spanish Mission to Dra Abu el-Naga, and their implications for environmental change in the Nile valley during the past two millennia

Excavation of Ptolemaic Period (ca. 309–30 BC) strata within Theban Tombs 11, 12, -399-, and UE194A by the Spanish Mission to Dra Abu el-Naga (also known as the Djehuty Project), on the west bank of the Nile River opposite Luxor, Egypt, yielded remains of at least 175 individual small mammals that include four species of shrews (Eulipotypha: Soricidae) and two species of rodents (Rodentia: Muridae). Two of the shrews ( Crocidura fulvastra and Crocidura pasha ) no longer occur in Egypt, and one species ( Crocidura olivieri ) is known in the country only from a disjunct population inhabiting the Nile delta and the Fayum. Although deposited in the tombs by humans as part of religious ceremonies, these animals probably derived originally from local wild populations. The coexistence of this diverse array of shrew species as part of the mammal community near Luxor indicates greater availability of moist floodplain habitats than occur there at present. These were probably made possible by a greater flow of the Nile, as indicated by geomorphological and palynological evidence. The mammal fauna recovered by the Spanish Mission provides a unique snapshot of the native Ptolemaic community during this time period, and it permits us to gauge community turnover in the Nile valley of Upper Egypt during the last 2000 years. It also serves as a relevant example for understanding the extinction and extirpation of mammal species as effects of future environmental changes predicted by current climatic models.

northern Egypt↗

USGS2005

Loosely bound oxytetracycline in riverine sediments from two tributaries of the Chesapeake Bay

The fate of antibiotics that bind to riverine sediment is not well understood. A solution used in geochemical extraction schemes to determine loosely bound species in sediments, 1 M MgCl 2 (pH 8), was chosen to determine loosely bound, and potentially bioavailable, tetracycline antibiotics (TCs), including oxytetracycline (5-OH tetracycline) (OTC) in sediment samples from two rivers on the eastern shore of the Chesapeake Bay. Bottom sediments were collected at sites upstream from, at, and downstream from municipal sewage-treatment plants (STPs) situated on two natural waterways, Yellow Bank Stream, MD, and the Pocomoke River, MD. Concentrations of easily desorbed OTC ranged from 0.6 to approximately 1.2 μg g -1 dry wt sediment in Yellow Bank Stream and from 0.7 to approximately 3.3 μg g -1 dry wt sediment in the Pocomoke River. Concentrations of easily desorbable OTC were generally smaller in sediment upstream than in sediment downstream from the STP in the Pocomoke River. STPs and poultry manure are both potential sources of OTC to these streams. OTC that is loosely bound to sediment is subject to desorption. Other researchers have found desorbed TCs to be biologically active compounds.

Chesapeake Bay↗

USGS2017

Spatial mismatch between sea lamprey behaviour and trap location explains low success at trapping for control

Crucial to the management of invasive species is understanding space use and the environmental features affecting space use. Improved understanding of space use by invasive sea lamprey ( Petromyzon marinus ) could help researchers discern why trap success in large rivers is lower than needed for effective control. We tested whether manipulating discharge nightly could increase trap success at a hydroelectric generating station on the St. Marys River. We quantified numbers of acoustically tagged sea lampreys migrating up to, and their space use at, the hydroelectric generating station. In 2011 and 2012, 78% and 68%, respectively, of tagged sea lampreys reached the generating station. Sea lampreys were active along the face, but more likely to occur at the bottom and away from the traps near the surface, especially when discharge was high. Our findings suggest that a low probability of encountering traps was due to spatial (vertical) mismatch between space use by sea lamprey and trap locations and that increasing discharge did not alter space use in ways that increased trap encounter. Understanding space use by invasive species can help managers assess the efficacy of trapping and ways of improving trapping success.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2022

Physics-guided recurrent neural networks for predicting lake water temperature

This chapter presents a physics-guided recurrent neural network model (PGRNN) for predicting water temperature in lake systems. Standard machine learning (ML) methods, especially deep learning models, often require a large amount of labeled training samples, which are often not available in scientific problems due to the substantial human labor and material costs associated with data collection. ML models have found tremendous success in several commercial applications, e.g., computer vision and natural language processing. The chapter presents PGRNN as a general framework for modeling physical processes in engineering and environmental systems. The proposed PGRNN explicitly incorporates physical laws such as energy conservation or mass conservation. In particular, researchers started pursing this direction by using residual modeling, where an ML model is learned to predict the errors, or residuals, made by a physics-based model. Advanced ML models, especially deep learning models, often require a large amount of training data for tuning model parameters.

Book chapter↗