Geology Reports⌕ Search

SEARCH · Geology Reports

Results for “Bird Observer”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,063 records · Page 59Linked to original sources
USGS1995

Geographic patterns in relative abundances and population trends of breeding and wintering loggerhead shrikes in North America

In North America, the Breeding Bird Survey and the Christmas Bird Count provide data that are collected at sites visited each year, and the site-specific data can be placed in a Geographic Information System and smoothed to produce contour maps of relative abundance and trend for the United States and southern Canada. We develop these contour maps for Loggerhead Shrike (Lanius ludovicianus) data from both surveys, and compare the patterns derived from each survey to evaluate the consistency of trends and relative abundances within physiographic strata. Patterns in relative abundance seem to be associated with strata, especially in the breeding season, but trends are often heterogeneous within strata. Because of limitations of the surveys and observed geographic patterns of shrike trends in the survey data, we suggest that there is no natural scale for the analysis of shrike-habitat associations.

Book chapter↗
USGS2002

Transport of sludge-derived organic pollutants to deep-sea sediments at deep water dump site 106

Linear alkylbenzenes (LABs), coprostanol and epi-coprostanol, were detected in sediment trap and bottom sediment samples at the Deep Water Dump Site 106 located 185 km off the coast of New Jersey, in water depths from 2400 to 2900 m. These findings clearly indicate that organic pollutants derived from dumped sludge are transported through the water column and have accumulated on the deep-sea floor. No significant difference in LABs isomeric composition was observed among sludge and samples, indicating little environmental biodegradation of these compounds. LABs and coprostanol have penetrated down to a depth of 6 cm in sediment, indicating the mixing of these compounds by biological and physical processes. Also, in artificially resuspended surface sediments, high concentrations of LABs and coprostanols were detected, implying that sewage-derived organic pollutants initially deposited on the deep-sea floor can be further dispersed by resuspension and transport processes. Small but significant amounts of coprostanol were detected in the sediment from a control site at which no LABs were detected. The coprostanol is probably derived from feces of marine mammals and sea birds and/or from microbial or geochemical transformations of cholesterol. Polcyclic aromatic hydrocarbons (PAHs) in sediment trap samples from the dump site were largely from the sewage sludge and had a mixed petroleum and pyrogenic composition. In contrast, PAHs in sediments in the dump site were mainly pyrogenic; contributed either from sewage sludge or from atmospheric transport to the overlying waters. & 1994 American Chemical Society.

Environmental Science & Technology↗
USGS2015

A framework for decision points to trigger adaptive management actions in long-term incidental take permits

Introduction The U.S. Fish and Wildlife Service (USFWS) has begun to issue incidental take permits (ITPs) to wind power companies to allow limited take of bird and bat species that are protected under the Endangered Species Act, the Bald and Golden Eagle Protection Act, or the Migratory Bird Treaty Act (Huso and others, 2015). Expected take rates are determined using scientifically based collision-risk models and knowledge about the ecology of the population of interest. ITPs often include mitigation requirements to compensate for estimated take and further describe (1) adaptive management actions (AMAs) that may be required to reduce take rates if permitted rate is exceeded, or (2) additional compensatory mitigation to offset take that exceeds permitted levels. Confirming the accuracy of predicted take and providing evidence that permitted take levels have not been exceeded can be challenging because carcasses may be detected with probability much less than 1, and often no carcasses are observed. When detection probability is high, finding 0 carcasses can be interpreted as evidence that none (or few) were actually killed. As the probability of observing an individual decreases, the likelihood of missing carcasses increases, making it unclear how to interpret having observed 0 (or few) carcasses. In a practical sense, the consequences of incorrect inference can be significant: overestimating take could result in costly and unjustified mitigation, whereas underestimating could result in unanticipated declines in species populations already at risk.

Open-File Report↗
USGS2013

Avian disease assessment in seabirds and non-native passerines birds at Midway Atoll NWR

Midway Atoll in the Northwestern Hawaiian Islands supports the largest breeding colony of Laysan albatross ( Phoebastria immutabilis ) in the world and is a proposed site for the translocation of endangered Northwestern Hawaiian Island passerine birds such as the Nihoa finch ( Telespiza ultima ), Nihoa millerbird ( Acrocephalus familiaris kingi ), or Laysan finch ( Telespiza cantans ). On the main Hawaiian Islands, introduced mosquito-borne avian malaria ( Plasmodium relictum ) and avian pox ( Avipoxvirus ) have contributed to the extinction and decline of native Hawaiian avifauna. The mosquito vector ( Culex quinquefasciatus ) is present on Sand Island, Midway Atoll, where epizootics of Avipoxvirus have been reported among nestling Laysan albatross, black-footed albatross ( Phoebastria nigripes ), and red-tailed tropicbirds ( Phaethon rubricauda ) since 1963. Two introduced passerines, the common canary ( Serinus canaria ) and the common myna ( Acridotheres tristis ), are also present on Sand Island and may serve as reservoirs of mosquito-borne pathogens. Assessing disease prevalence and transmission potential at Midway Atoll National Wildlife Refuge (NWR) is a critical first step to translocation of Nihoa endemic passerines. In May 2010 and April 2012 we surveyed Midway Atoll NWR for mosquitoes and evidence of mosquito-borne disease. Although we did not observe active pox infections on albatross nestlings in May 2010, active infections were prevalent on albatross nestlings in April 2012. Presumptive diagnosis of Avipoxvirus was confirmed by PCR amplification of the Avipoxvirus 4b core protein gene from lesions collected from 10 albatross nestlings. Products were sequenced and compared to 4b core protein sequences from 28 Avipoxvirus isolates from the Hawaiian Islands and other parts of the world. Sequences from all Midway isolates were identical and formed a clade with other Avipoxvirus isolates from seabirds that was distinct from other Avipoxvirus isolates from the Hawaiian Islands. Tissue from three presumptive avian pox lesions from common canaries tested negative for Avipoxvirus . Blood samples from 124 canaries and 61 mynas tested negative for Plasmodium by one or more diagnostic tests based on microscopy, serology, or PCR diagnostics. Prevalence of Avipoxvirus infection was highest among albatross nestlings (94.6%) in the vicinity of the septic tanks where adult C. quinquefasciatus reached their highest densities, and data from all sites suggest a positive correlation between mosquito abundance and Avipoxvirus prevalence. Adult C. quinquefasciatus were also locally abundant around fishless, constructed wetlands. Since 1996, infrastructure removal and source reduction efforts by the refuge have greatly reduced the availability of underground and container habitats for larval mosquitoes on Sand Island. However, the creation of artificial wetlands and a central septic system on Sand Island has resulted in new, highly productive larval mosquito habitat for C. quinquefasciatus . Despite the presence of endemic Avipoxvirus in albatross nestlings and the introduction of mosquito vectors and two susceptible passerine species in the last century, we found no evidence of the avian malaria Plasmodium relictum or a passerine-infecting Avipoxvirus on Midway Atoll NWR that would interfere with the successful translocation of endemic Northwestern Hawaiian Island passerines. Without eradication of mosquitoes from Midway Atoll, however, periodic epizootics of Avipoxvirus among nestling seabirds will likely continue, and the introduction of malaria and passerine strains of Avipoxvirus from migratory birds will remain a long-term threat to passerine restoration programs.

Hawai'i↗
USGS2021

Plasma metabolite indices are robust to extrinsic variation and useful indicators of foraging habitat quality in Lesser Scaup

Energy acquisition and storage are important for survival and fecundity of birds during resource-limited periods such as spring migration. Plasma-lipid metabolites (i.e. triglyceride [TRIG], β-hydroxybutyrate [BOHB]) have been used to index changes in lipid stores and, thus, have utility for assessing foraging habitat quality during migration. However, such an index may be affected by energetic maintenance costs, diet, and other factors, and further validation under experimental conditions is needed to understand potential sources of variation and verify existing indices. We evaluated a plasma-lipid metabolite index using 30 female and 28 male wild Lesser Scaup ( Aythya affinis ; hereafter scaup) held in short-term captivity (~24 hr) during spring migration. Similar to previous observational studies, BOHB was negatively associated and TRIG was positively associated with mass change ( R 2 = 0.68). BOHB estimates were nearly identical to those published on free-living scaup, but TRIG estimates differed from free-living scaup and varied by sex, with females having a greater rate of predicted mass change than captive and free-living males. Our results suggest TRIG may be a better measure of energy income than deposition because lipid deposition likely varies with energetic maintenance costs, stress, and underlying physiological processes while TRIG relates primarily to energy income. In contrast, BOHB was a reliable predictor of negative mass change across sexes. The sex-based differences in apparent lipid deposition rates warrant further research before a generalizable model is advisable for comparing mass change predictions across studies. However, if predictions are standardized, this technique is generally robust to variations in energy income vs. lipid deposition across sexes. Accordingly, our evaluation provides verification for the utility of plasma-lipid metabolites as an indicator of foraging habitat quality during migration.

Illinois↗
USGS1975

Reproductive biology of the band-tailed pigeon in Colorado and New Mexico

Band-tailed pigeons ( Columba fasciata ) occur in two major populations in western North America, a coastal population ( C. f. monilis ) and an interior population ( C. f. fasciata ) (A.O.U. 1957). The interior population inhabits portions of Colorado, New Mexico, Arizona, Utah, Texas, and the highlands of Mexico. This pigeon is one of several species of birds in western North America that show unseasonal and variable nesting periods (see Ligon 1971). Active nests have been found in some portion of the species' range in every month of the year (Swarth 1900, Thayer 1909, Stephens 1913, Lamb 1926, Abbott 1927, Vorhies 1928, Neff 1947, MacGregor and Smith 1955). Although several studies of the breeding biology of the Band-tailed Pigeon have been made on the Pacific coast population (Glover 1953, MacGregor and Smith 1955, Houston 1963, March and Sadleir 1970, Zeigler 1971) few studies have been done of the interior population (Fitzhugh 1970). The breeding cycle of the interior population is poorly understood, although many observations of individual nests have been reported (Neff 1947, Fitzhugh 1970). The purpose of this study was to document the gonadal cycles of free-living Band-tailed Pigeons in Colorado and New Mexico and to study the species' photoperiod responses. From this information we have attempted to explain the normal breeding cycle of the pigeon and to explain its occasional unseasonal breeding.

The Auk↗
USGS2008

Impact of West Nile virus and other mortality factors on American white pelicans at breeding colonies in the northern plains of North America

American white pelicans (Pelecanus erythrorhynchos) are colonial-nesting birds and their breeding sites are concentrated in a few small areas, making this species especially vulnerable to factors that can influence productivity, such as disease, disturbance, predation, weather events and loss of nesting habitat. Nearly half of the American white pelican population breeds at four colonies in the northern plains: Chase Lake National Wildlife Refuge (NWR) in North Dakota, Bitter Lake (Waubay NWR) in South Dakota, Medicine Lake NWR in Montana, and Marsh Lake in Minnesota. Thus, sustained productivity at these colonies is crucial to the health of the entire species. During the latter half of the 2002 and 2003 breeding seasons, unusually high mortality of pelican chicks was observed at these colonies. West Nile virus (WNv) was identified as one source of these losses. In 2004-2007 we monitored three major colonies in the northern plains to assess mortality of chicks during the late breeding season. We documented severe weather events, disturbance, and WNv as factors contributing to chick mortality. Before WNv arrived in the region in 2002, chick mortality after mid-July was ???4%, and then jumped to as high as 44% in the years since WNv arrived. WNv kills older chicks that are no longer vulnerable to other common mortality factors (e.g., severe weather, gull predation) and typically would have survived to fledge; thus WNv appears to be an additive mortality factor. Persistence of lower productivity at American white pelican colonies in the northern plains might reduce the adult breeding population of this species in the region.

Montana, North Dakota, South Dakota↗
USGS2016

Haemosporidian parasite infections in grouse and ptarmigan: Prevalence and genetic diversity of blood parasites in resident Alaskan birds

Projections related to future climate warming indicate the potential for an increase in the distribution and prevalence of blood parasites in northern regions. However, baseline data are lacking for resident avian host species in Alaska. Grouse and ptarmigan occupy a diverse range of habitat types throughout the northern hemisphere and are among the most well-known and important native game birds in North America. Information regarding the prevalence and diversity of haemosporidian parasites in tetraonid species is limited, with few recent studies and an almost complete lack of genetic data. To better understand the genetic diversity of haemosporidian parasites in Alaskan tetraonids and to determine current patterns of geographic range and host specificity, we used molecular methods to screen 459 tissue samples collected from grouse and ptarmigan species across multiple regions of Alaska for infection by Leucocytozoon, Haemoproteus, and Plasmodium blood parasites. Infections were detected in 342 individuals, with overall apparent prevalence of 53% for Leucocytozoon , 21% for Haemoproteus , and 9% for Plasmodium . Parasite prevalence varied by region, with different patterns observed between species groups (grouse versus ptarmigan). Leucocytozoon was more common in ptarmigan, whereas Haemoproteus was more common in grouse. We detected Plasmodium infections in grouse only. Analysis of haemosporidian mitochondrial DNA cytochrome b sequences revealed 23 unique parasite haplotypes, several of which were identical to lineages previously detected in other avian hosts. Phylogenetic analysis showed close relationships between haplotypes from our study and those identified in Alaskan waterfowl for Haemoproteus and Plasmodium parasites. In contrast, Leucocytozoon lineages were structured strongly by host family. Our results provide some of the first genetic data for haemosporidians in grouse and ptarmigan species, and provide an initial baseline on the prevalence and diversity of blood parasites in a group of northern host species.

Alaska↗
USGS2006

Effects of El Niño on distribution and reproductive performance of Black Brant

Climate in low-latitude wintering areas may influence temperate and high-latitude breeding populations of birds, but demonstrations of such relationships have been rare because of difficulties in linking wintering with breeding populations. We used long-term aerial surveys in Mexican wintering areas and breeding areas in Alaska, USA, to assess numbers of Black Brant ( Branta bernicla nigricans ; hereafter brant) on their principal wintering and breeding area in El Niño and non-El Niño years. We used Pollock's robust design to directly estimate probability of breeding and apparent annual survival of individually marked brant at the Tutakoke River (TR) colony, Alaska, in each year between 1988 and 2001. Fewer brant wintered in Mexico during every El Niño event since 1965. Fewer brant were observed on the principal breeding area following each El Niño since surveys began in 1985. Probability of breeding was negatively related to January sea surface temperature along the subtropical coast of North America during the preceding winter. Between 23% (five-year-olds or older) and 30% (three-year-olds) fewer brant nested in 1998 following the strong El Niño event in the winter of 1997–1998 than in non-El Niño years. This finding is consistent with life history theory, which predicts that longer-lived species preserve adult survival at the expense of reproduction. Oceanographic conditions off Baja California, apparently by their effect on Zostera marina (eelgrass), strongly influence winter distribution of brant geese and their reproduction (but not survival), which in turn affects ecosystem dynamics in Alaska.

Alaska↗
USGS2018

Potential effects of GPS transmitters on greater sage-grouse survival in a post-fire landscape

Rigorous monitoring and evaluation of wildlife population performance because of management or disturbance often relies upon the handling and marking of animals. Such studies must assume that marking animals does not affect their behavior or demography. We examined survival of greater sage-grouse Centrocercus urophasianus post wildfire in southeastern Oregon, USA. We observed extremely high mortality rates early in the study and questioned if our global positioning systems (GPS) transmitters were negatively affecting survival of adult greater sage-grouse. Thus, in situ we captured and randomly assigned additional grouse to either a GPS or VHF transmitter and examine patterns of mortality and estimated survival to evaluate if there were in fact transmitter effects on this important vital rate. Our results indicated that regardless of instrument type large wildfire had negative effects on monthly survival the first year after the fire. However, point estimates indicated that greater sage-grouse fitted with GPS transmitters had approximately 5% lower annual survival than VHF tagged birds, but although there was relatively large overlap in confidence limits, likely caused by small sample sizes. Further research is needed to disentangle potential confounding effects of GPS transmitters on survival impacts of grouse in association with large disturbance.

Oregon↗
USGS2001

Influence of military activities on raptor abundance and behavior

We investigated the influence of military training on the abundance and behavior of raptors at a military training area in the Snake River Birds of Prey National Conservation Area in Idaho during the breeding seasons of 1991a??1994. Raptor counts on military training ranges did not differ when we compared all training days to all non-training days. However, during one period of intensive military training in one breeding season, raptor counts were lower during training than on non-training days. During training, Northern Harriers (Circus cyaneus) did not alter their behavior on training days. In years when prey numbers were low, falcons, hawks, and eagles perched and flew at low levels less often and flew at higher altitudes more often during training than they did when training did not occur. We observed fewer prey capture attempts on ranges on days with training than on days without training. Specific types of military training activity affected counts of raptors on ranges. The lowest raptor counts were associated with firing of artillery, small arms, and main turret guns or machine guns on tanks. Raptor counts associated with tank preparation (i.e., assembling and loading ammunition), driving, laser training, and convoy traffic were similar to non-training periods.

The Condor↗
USGS2017

Prevalence and distribution of Wellfleet Bay virus exposure in the Common Eider ( Somateria mollissima )

Between 1998 and 2014, recurrent mortality events were reported in the Dresser's subspecies of the Common Eider ( Somateria mollissima dresseri ) on Cape Cod, Massachusetts, USA near Wellfleet Harbor. The early die-offs were attributed to parasitism and emaciation, but beginning in 2006 a suite of distinct lesions was observed concomitant with the isolation of a previously unknown RNA virus. This novel pathogen was identified as an orthomyxovirus in the genus Quaranjavirus and was named Wellfleet Bay virus (WFBV). To assess evidence of exposure to this virus in Common Eiders, we conducted a longitudinal study of the prevalence of WFBV antibodies at multiple locations from 2004–14; we collected 2,258 serum samples from six locations and analyzed each using a microneutralization assay. Results corroborate the emergence of WFBV in 2006 based on the first detection of antibodies in that year. Significantly higher prevalence was detected in Common Eiders sampled in Massachusetts compared to those in Maine, Nova Scotia, and Québec. For birds breeding and wintering in Massachusetss, viral exposure varied by age, sex, and season of sampling, and prevalence by season and sex were highly interrelated with greater numbers of antibody-positive males in the autumn and females in the spring. No evidence of viral exposure was detected in the Northern subspecies ( Somateria mollissima borealis ). Among the locations sampled, Massachusetts appears to be the epicenter of Common Eider exposure to WFBV. Further research is warranted to understand the factors controlling the epidemiology of WFBV in Massachussetts, including those that may be limiting geographic expansion of this virus.

Journal of Wildlife Diseases↗
USGS1990

Movements and bioenergetics of canvasbacks wintering in the upper Chesapeake Bay

The movement patterns, range areas and energetics of canvasbacks (Aythya valisineria) wintering in the upper Chesapeake Bay, Maryland, were investigated. Eighty-seven juvenile female canvasbacks were radio-tracked between 30 December 1988 and 25 March 1989. Diurnal time and energy budgets were constructed for a time of day-season matrix for canvasbacks using riverine and main bay habitats. Canvasbacks were very active at night, making regular and often lengthy crepuscular movements (x = 11.7 km) from near shore habitats during the day to off shore habitats at night. Movement patterns were similar for birds using habitats on the eastern and western shores of the Bay. Canvasbacks had extensive home ranges averaging 14,286 ha, and used an average of 1.97 core areas. Sleeping was the predominant diurnal behavior. Telemetry indicated that canvasbacks actively fed at night. Canvasbacks spent more time in active behaviors (e.g. swimming, alert) on the eastern shore than on the western shore. Similarly, canvasbacks were more active during daytime hours at locations where artificial feeding occurred. Behavioral patterns were only weakly correlated with weather patterns. Canvasbacks appeared to reduce energy expenditure in mid-winter by reducing distances moved, reducing feeding activities and increasing the amount of time spent sleeping. This pattern was observed even though 1988-89 mid-winter weather conditions were very mild.

Book↗
USGS2012

Nest survival of piping plovers at a dynamic reservoir indicates an ecological trap for a threatened population

In the past 60 years, reservoirs have reshaped riverine ecosystems and transformed breeding habitats used by the threatened piping plover (Charadrius melodus; hereafter plover). Currently, 29% of the Northern Great Plains plover population nests at reservoirs that might function as ecological traps because reservoirs have more diverse habitat features and greater dynamics in water levels than habitats historically used by breeding plovers. We examined factors influencing daily survival rates (DSR) of 346 plover nests at Lake Sakakawea (SAK; reservoir) during 2006–2009 by evaluating multiple a priori models, and we used our best model to hindcast nest success of plovers during 1985–2009. Our observed and hindcast estimates of nest success were low compared to published estimates. Previous findings indicate that plovers prefer nest sites that are low relative to water level. We found that elevation of nests above the water level had a strong positive correlation with DSR because water levels of SAK typically increased throughout the nesting period. Habitat characteristics on the reservoir differ from those that shaped nest-site selection for plovers. Accordingly, extraordinary nest loss occurs there in many years, largely due to inundation of nests, and based on low fledging rates those losses were not compensated by potential changes in chick survival. Therefore, our example supports the concept of ecological traps in birds because it addresses quantitative assessments of habitat preference and productivity over 25 years (since species listing) and affects a large portion of the population.

North Dakota↗
USGS2015

Total- and methyl-mercury concentrations and methylation rates across the freshwater to hypersaline continuum of the Great Salt Lake, Utah, USA

We examined mercury (Hg) speciation in water and sediment of the Great Salt Lake and surrounding wetlands, a locale spanning fresh to hypersaline and oxic to anoxic conditions, in order to test the hypothesis that spatial and temporal variations in Hg concentration and methylation rates correspond to observed spatial and temporal trends in Hg burdens previously reported in biota. Water column, sediment, and pore water concentrations of methylmercury (MeHg) and total mercury (THg), as well as related aquatic chemical parameters were examined. Inorganic Hg(II)-methylation rates were determined in selected water column and sediment subsamples spiked with inorganic divalent mercury ( 204 Hg(II)). Net production of Me 204 Hg was expressed as apparent first-order rate constants for methylation ( k meth ), which were also expanded to MeHg production potential (MPP) rates via combination with tin reducible ‘reactive’ Hg(II) (Hg(II) R ) as a proxy for bioavailable Hg(II). Notable findings include: 1) elevated Hg concentrations previously reported in birds and brine flies were spatially proximal to the measured highest MeHg concentrations, the latter occurring in the anoxic deep brine layer (DBL) of the Great Salt Lake; 2) timing of reduced Hg(II)-methylation rates in the DBL (according to both k meth and MPP) coincides with reduced Hg burdens among aquatic invertebrates (brine shrimp and brine flies) that act as potential vectors of Hg propagation to the terrestrial ecosystem; 3) values of k meth were found to fall within the range reported by other studies; and 4) MPP rates were on the lower end of the range reported in methodologically comparable studies, suggesting the possibility that elevated MeHg in the anoxic deep brine layer results from its accumulation and persistence in this quasi-isolated environment, due to the absence of light (restricting abiotic photo demethylation) and/or minimal microbiological demethylation.

Utah↗
USGS2026

The collective application of shorebird tracking data to conservation

Addressing urgent conservation issues, such as the drastic declines of North American migratory birds, requires creative, evidence-based, efficient, and collaborative approaches. The abundance of over 50% of monitored North American shorebird populations has declined by over 50% since 1980. To address these declines, we developed a partnership of scientists and practitioners called the Shorebird Science and Conservation Collective (hereafter the collective ). The collective was founded to translate the combined findings of shorebird tracking data into on-the-ground conservation action. With advice from an advisory group, the collective acts as an intermediary whereby dedicated staff collate and analyze data contributions from scientists to support knowledge requests from conservation practitioners. In its first three years, data contributions from 75 organizations include over 7.1 million shorebird observations forming movement paths of 3420 individuals representing 36 species tracked across the Americas and have informed 18 conservation projects spanning education, land and species management, land conservation, and policy requests. Others engaged in translational science from big data could consider similar knowledge-sharing models that prioritize usable data products, foster collaborative engagement between science experts and practitioners, build focused communities around topics or taxonomic groups, and employ a proof-of-concept phase to develop scalable solutions while making progress toward long-term funding to sustain impact. As the volume of scientific data continues to grow, intermediaries, such as the collective, can be vital liaisons to rapidly integrate and interpret research to support conservation action. Dedicated to the memory of Shiloh Schulte and his conservation achievements for shorebirds.

Conservation Biology↗
USGS2009

Modeling the effects of environmental disturbance on wildlife communities: Avian responses to prescribed fire

Prescribed fire is a management tool used to reduce fuel loads on public lands in forested areas in the western United States. Identifying the impacts of prescribed fire on bird communities in ponderosa pine (Pinus ponderosa) forests is necessary for providing land management agencies with information regarding the effects of fuel reduction on sensitive, threatened, and migratory bird species. Recent developments in occupancy modeling have established a framework for quantifying the impacts of management practices on wildlife community dynamics. We describe a Bayesian hierarchical model of multi-species occupancy accounting for detection probability, and we demonstrate the model's usefulness for identifying effects of habitat disturbances on wildlife communities. Advantages to using the model include the ability to estimate the effects of environmental impacts on rare or elusive species, the intuitive nature of the modeling, the incorporation of detection probability, the estimation of parameter uncertainty, the flexibility of the model to suit a variety of experimental designs, and the composite estimate of the response that applies to the collection of observed species as opposed to merely a small subset of common species. Our modeling of the impacts of prescribed fire on avian communities in a ponderosa pine forest in Washington indicate that prescribed fire treatments result in increased occupancy rates for several bark-insectivore, cavity-nesting species including a management species of interest, Black-backed Woodpeckers (Picoides arcticus). Three aerial insectivore species, and the ground insectivore, American Robin (Turdus migratorius), also responded positively to prescribed fire, whereas three foliage insectivores and two seed specialists, Clark's Nutcracker (Nucifraga columbiana) and the Pine Siskin (Carduelis pinus), declined following treatments. Land management agencies interested in determining the effects of habitat manipulations on wildlife communities can use these methods to provide guidance for future management activities. ?? 2009 by the Ecological Society of America.

Ecological Applications↗
USGS2004

Total mercury and methylmercury in fish fillets, water, and bed sediments from selected streams in the Delaware River basin, New Jersey, New York, and Pennsylvania, 1998-2001

Within the Delaware River Basin, fish-tissue samples were analyzed for total mercury (tHg). Water and bed-sediment samples were analyzed for tHg and methylmercury (MeHg), and methylation efficiencies were calculated. This study was part of a National Mercury Pilot Program conducted by the U.S. Geological Survey (USGS). The Delaware River Basin was chosen because it is part of the USGS National Water-Quality Assessment Program that integrates physical, chemical, and biological sampling efforts to determine status and trends in surface-water and ground-water resources. Of the 35 sites in the study, 31 were sampled for fish. The species sampled at these sites include smallmouth bass (Micropterus dolomieu), the target species, and where smallmouth bass could not be collected, brown trout (Salmo trutta), chain pickerel (Esox niger), largemouth bass (Micropterus salmoides), and rock bass (Ambloplites rupestris). There were a total of 32 fish samples; 7 of these exceeded the 0.3 microgram per gram wet-weight mercury (Hg) concentration set for human health by the U.S. Environmental Protection Agency and 27 of these exceeded the U.S. Fish and Wildlife Service criteria of 0.1 microgram per gram wet weight for the protection of fish-eating birds and wildlife. Basinwide analysis of Hg in fish, water, and bed sediment showed tHg concentration in fillets correlated positively with population density, urban land cover, and impervious land surface. Negative correlations included wetland land cover, septic density, elevation, and latitude. Smallmouth bass from the urban sites had a higher median concentration of tHg than fish from agricultural, low intensity-agricultural, or forested sites. Concentrations of tHg and MeHg in water were higher in samples from the more urbanized areas of the basin and were positively correlated with urbanization and negatively correlated with forested land cover. Methylation efficiency of water was negatively correlated with urbanization. Bed-sediment patterns were similar to those observed in water. Concentrations of tHg were higher in samples from the urbanized areas. In the more forested areas, MeHg concentrations were higher than in other land-use areas. Concentrations of tHg in bed sediment were positively correlated with urbanization factors (population, urban land cover, and impervious land surface) and negatively correlated with forested land cover and elevation. Forested land cover and latitude were positively correlated with concentrations of MeHg. The methylation efficiency was higher in samples from the forested areas and was negatively correlated with urbanization. Analyses within land-use groups showed that tHg concentrations in fish fillets from the urban sites were positively correlated with forested land cover and wetland cover. Urbanization factors within the agricultural group were positively correlated with tHg in fish; concentrations of tHg in fish from sites in the low intensity-agricultural group were negatively correlated with urbanization factors. Within the agricultural land-use group, tHg concentrations in water were negatively correlated with septic density, and MeHg concentrations were negatively correlated with elevation. In the forested and low intensity-agricultural groups, MeHg in water was negatively correlated with forested and agricultural land cover. Methylation efficiency in water also was negatively correlated with forested land cover but positively correlated with agricultural land cover. Bed-sediment concentrations of tHg in the forested and low-agricultural groups were positively correlated with agricultural land cover and negatively correlated with forested land cover. Concentrations of MeHg in bed sediment were positively correlated with septic density and drainage area and negatively correlated with forested land cover. Methylation efficiency was negatively correlated with population density, agricultural land cover, and sulfate concentrations in water. An urbanization effect was observed in all three media—fish, water, and bed sediment. Different factors, basinwide and within land-use groups, showed a complex relation. Additional sampling within these land-use groups could help characterize interrelations of Hg in the environment to fish in the Delaware River Basin.

New Jersey, New York, Pennsylvania↗