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At least 1,045 records · Page 58Linked to original sources

USGS2012

Alternative barging strategies to improve survival of salmonids transported from Lower Granite Dam: Final report from the 2006-2008 spring/summer Chinook salmon and Steelhead juvenile migrations

In 2011, the final year class of adult salmon Oncorhynchus spp. returned from smolt groups released for a multi-year study to evaluate an alternate release site for transported fish. Smolts were collected and tagged at Lower Granite Dam, transported, and released at the alternate site near Astoria, Oregon (river kilometer 10) or at the traditional release site near Skamania Landing (rkm 225) just downstream of Bonneville Dam. Study fish were juvenile steelhead O. mykiss and yearling spring/summer Chinook salmon O. tshawytscha , and our evaluation was based on comparisons of smolt-to-adult return rates (SARs) between replicate paired groups. Our hypothesis was that moving the traditional barge-release site 215 km downstream could increase adult returns by decreasing smolt mortality due to predation by piscivorous fish and birds. Paired groups were released weekly over 6 weeks during the migration seasons of 2006, 2007, and 2008. The last adult steelhead from these releases returned in May 2011 (2-ocean), and the last adult Chinook salmon in August 2011 (3-ocean). We found no evidence of a consistent difference in SARs for fish released at the two barge-release locations. Data were not sufficient to evaluate the effects of fish pathogens on avian predation. There was clear evidence that fish of both species released at Astoria were less vulnerable to avian predators than those released at the customary site at Skamania Landing. Unfortunately, this survival benefit did not translate to higher SARs, as it was offset by higher rates of straying by fish released from Astoria. This was likely a result of greater impairment to homing ability for fish released at Astoria.

Oregon, Washington↗

USGS1993

Growth and survival of Mountain Plovers

Growth and survival rates of Mountain Plovers ( Charadrius montanus ) were monitored using radiotelemetry from hatching until birds left the breeding grounds on the Pawnee National Grassland, Weld County, Colorado. Chick weights increased logarithmically ( r ) = 0.961) and tarsus length linearly ( r = 0.948) with age. Using the average fledgling weight of 69.8 g and an age/weight regression we predicted that the average age at fledging was 36 d. Fourteen Mountain Plover nests each had three effs; an average of 2.6 eggs hatched in seven nests, whereas remaining nests were lost to predation, storms, or trampling by a cow. Twenty-four adult Mountain Plovers were monitored for 275 telemetry days with no mortalities. Twenty flightless chicks had a calculated daily survival rate of 0.979 for 233 telemetry-days. Mortalities of flightless chicks were due to predation or unknown causes. The daily survival rate predicted that 1.2 of the 2.6 chicks hatched per nest lived to fly. Eight fledged chicks were monitored for 74 telemetry-days, with a daily survival rate of 0.974. Mortalities of fledglings were all attributed to predation. The combined survival rates predicted that 0.7 or the 2.6 hatched chicks lived to leave the nesting area. Survival rates of flightless chicks were similar to those reported 20 yr ago, implying that recent declines in Mountain Plover numbers on the continent are not attributable to either longer-term declines in nesting productivity or phenomena occurring at non-breeding locales.

Journal of Field Ornithology↗

USGS2014

Waterfowl habitat use and selection during the remigial moult period in the northern hemisphere

This paper reviews factors affecting site selection amongst waterfowl (Anatidae) during the flightless remigial moult, emphasising the roles of predation and food supply (especially protein and energy). The current literature suggests survival during flightless moult is at least as high as at other times of the annual cycle, but documented cases of predation of flightless waterfowl under particular conditions lead us to infer that habitat selection is generally highly effective in mitigating or avoiding predation. High energetic costs of feather replacement and specific amino-acid requirements for their construction imply adoption of special energetic and nutritional strategies at a time when flightlessness limits movements. Some waterfowl meet their energy needs from endogenous stores accumulated prior to remigial moult, others rely on exogenous supply, but this varies with species, age, reproductive status and site. Limited evidence suggests feather proteins are derived from endogenous and exogenous sources which may affect site selection. Remigial moult does not occur independently of other annual cycle events and is affected by reproductive investment and success. Hence, moult strategies are affected by age, sex and reproductive history, and may be influenced by the need to attain a certain internal state for the next stage in the annual cycle (e.g. autumn migration). We know little about habitat selection during moult and urge more research of this poorly known part of the annual cycle, with particular emphasis on identifying key concentrations and habitats for specific flyway populations and the effects of disturbance upon these. This knowledge will better inform conservation actions and management actions concerning waterfowl during moult and the habitats that they exploit.

Wildfowl↗

USGS2015

Snake River fall Chinook salmon life history investigations, 1/1/2013 – 12/31/2013

Smallmouth bass predation on subyearling fall Chinook salmon was examined in the upper portion of Lower Granite Reservoir during 2013. During the time subyearlings were present in the reservoir, smallmouth bass were collected, their stomach contents removed for diet analysis, and their abundance estimated with mark-recapture techniques. In 2013, the greatest consumption of subyearlings by smallmouth bass occurred in late May and early June—as much as 50% of their diet by weight. Sand rollers were the most common non-salmonid fish consumed by smallmouth bass. In the section of the reservoir above the confluence with the Clearwater River, the abundance of bass was higher in non-riprap habitat than in riprap, but the opposite was true in the section below the confluence. We estimated that over 168,000 subyearlings were lost to smallmouth bass predation in 2013. Given the predominance of sand rollers in the diet of smallmouth bass, we believe this species reduces predation on subyearling fall Chinook salmon. A complete report of our findings is provided in the Appendix.

Washington↗

USGS2011

Development of a bioenergetics model for age-0 American shad

Bioenergetics modeling can be used as a tool to investigate the impact of non-native age-0 American shad ( Alosa sapidissima ) on reservoir and estuary food webs. The model can increase our understanding of how these fish influence lower trophic levels as well as predatory fish populations that feed on juvenile salmonids. Bioenergetics modeling can be used to investigate ecological processes, evaluate alternative research hypotheses, provide decision support, and quantitative prediction. Bioenergetics modeling has proven to be extremely useful in fisheries research (Ney et al. 1993,Chips and Wahl 2008, Petersen et al. 2008). If growth and diet parameters are known, the bioenergetics model can be used to quantify the relative amount of zooplankton or insects consumed by age-0 American shad. When linked with spatial and temporal information on fish abundance, model output can guide inferential hypothesis development to demonstrate where the greatest impacts of age-0 American shad might occur. Bioenergetics modeling is particularly useful when research questions involve multiple species and trophic levels (e.g. plankton communities). Bioenergetics models are mass-balance equations where the energy acquired from food is partitioned between maintenance costs, waste products, and growth (Winberg 1956). Specifically, the Wisconsin bioenergetics model (Hanson et al. 1997) is widely used in fisheries science. Researchers have extensively tested, reviewed, and improved on this modeling approach for over 30 years (Petersen et al. 2008). Development of a bioenergetics model for any species requires three key components: 1) determine physiological parameters for the model through laboratory experiments or incorporate data from a closely related species, 2) corroboration of the model with growth and consumption estimates from independent research, and 3) error analysis of model parameters. Wisconsin bioenergetics models have been parameterized for many of the salmonids and predatory fishes encountered in the lower Columbia River (Petersen and Ward 1999). The Wisconsin bioenergetics model has not been developed for American shad, however Limburg (1996) parameterized a simplified bioenergetics growth model for this species. A common application for the Wisconsin bioenergetics model is to estimate the consumption or growth of a fish population under different temperature and feeding scenarios (Ney 1993). One advantage of the bioenergetics approach is that consumption can be estimated without direct field measurements of predation rate (prey·predator -1 · day -1 ; Petersen and Ward 1999). Field estimates of fish consumption are time consuming and costly to determine, and estimates may show wide variance due to environmental and sampling variability. However, the consumption parameters used in a newly developed bioenergetics model must be verified with field and laboratory estimates of consumption (Ney 1993). The objective of this research was to parameterize a Wisconsin bioenergetics model for age-0 American shad using published physiological data on American shad and closely related alosine species. The American shad bioenergetics model will be used as a tool to explore various hypotheses about how age-0 American shad directly and indirectly affect Columbia River salmon through ecological interactions in lower Columbia River food webs. One over-arching focus of the larger research project was to identify potential interactions between age-0 American shad and juvenile salmonids, addressing potential outcomes through bioenergetics modeling scenarios. This report contains two bioenergetics modeling applications to demonstrate how these models can be used to address management questions and direct research effort. The first modeling application uses the American shad bioenergetics model described in this report to explore prey consumption by age-0 American shad (Chapter 1, this report). Dietary data on age-0 American shad and previously published reports on the diet of juvenile fall Chinook salmon (Rondorf et al. 1990, USGS unpublished data) suggested there might be considerable dietary overlap between these species in the lower Columbia River. The U.S. Geological Survey (USGS) was interested in using the American shad bioenergetics model to explore hypotheses concerning dietary overlap between age-0 American shad and emigrating fall Chinook salmon. The second modeling application uses the fall Chinook salmon bioenergetics model (Koehler et al. 2006) to explore the growth potential of juvenile fall Chinook salmon predating on age-0 American shad in the lower Columbia River. This modeling was based dietary information on a small number of age-0 fall Chinook salmon (n = 13) collected in John Day Reservoir in 1994 - 1996 (unpublished USGS data). Analysis of this dietary data found that these salmonids were feeding primarily on age-0 American shad (> 75% by weight).

Oregon↗

USGS2014

Strength of evidence for the effects of feral cats on insular wildlife: The Club Med Syndrome Part II

Various types of evidence have been promulgated as proof for the effects of feral cats on wildlife, typically including numerous studies on predation inferred from diet, mortality attributed to pathogens, and photographic or videographic documentation. The strength of these types of evidence is often short of conclusive. For example, studies of predation inferred from diet provide weak evidence for two reasons: 1) they cannot differentiate depredation from scavenging by feral cats, and 2) they cannot address population-level effects on wildlife because it is rarely understood if mortality acts in compensatory or additive manner. Likewise, pathogens may cause mortality of individuals, but population-level effects of pathogens are rarely known. Photographic or videographic documentation provides direct ‘smoking gun’ evidence that may be useful for positive identification of depredation by cats, or identification of prey designated as threatened or endangered species. However, the most direct and compelling evidence comes from examples where feral cats have been entirely removed from islands. In many cases, several species of seabirds as well as other wildlife have recovered after the complete removal of cats. Where possible, the experimental removal of cats would provide the most conclusive proof of effects on wildlife populations. In other cases where cat removal is not feasible, modeling based on predation rates and life history parameters of species may be the only means of assessing population-level effects on wildlife. Understanding population-level effects of feral cats on wildlife will ultimately be necessary to resolve long-standing wildlife management issues.

Conference Paper↗

USGS2010

Limiting factors of four rare plant species in `Ōla`A Forest of Hawai'i Volcanoes National Park

Three endangered or candidate endangered plant species native to `Ōla`a Forest ( Cyrtandra giffardii , ha`iwale; Phyllostegia floribunda , a mint with no common name; and Sicyos alba , `ānunu) were studied for more than 2 years to determine their stand structures, short-term mortality rates, patterns of reproductive phenology, success of fruit production, seed germination rates in the greenhouse, presence of soil seed bank, and survival of both natural and planted seedlings. The role of rodents as seed predators was evaluated for S. alba using seed offerings in open and closed stations. A 4th endangered species at a remote site in `Ōla`a ( Cyrtandra tintinnabula ) was visited to determine its stand structure and mortality rate. Cyrtandra giffardii displayed a stable population structure with many adults and few small or very large plants; the monitored population had a mortality rate of 7.3% over 3 years. Mortality of plantings from 2003-2004 in a re-introduced population of Phyllostegia floribunda was 21.4%. The stand structure of C. tintinnabula indicated a relatively stable population with both small and large plants present and a short-term mortality rate between visits of 14.5- 17.0%. Four groups of S. alba vines were monitored; 3 of these have persisted in place for at least 15 years. All species monitored had annual patterns of flower and fruit phenology, although male inflorescences of S. alba showed a subannual pattern. Successful transition of flowers to fruit was high for P. floribunda (51.5%), moderate for C. giffardii (23.3%) and undetermined for S. alba . High percentage viability was demonstrated for seeds of P. floribunda and S. alba (78.5-100% positive to strongly positive in tetrazolium tests), but seed viability was not tested for C. giffardii . Greenhouse germination rates were high for P. floribunda (88.0-92.0%), but variable and relatively low for C. giffardii (0-19.3%) and S. alba (4.0-11.1% in 2007 and 0 in 2008). No soil seed bank was detected for S. alba in 3 seasonal samplings, but P. floribunda was found to have a viable seed bank in April that persisted from at least the previous summer. Rodent predation of S. alba seeds was 93.3% in fruit offerings in accessible bait stations. Mortality of natural seedlings was high for both P. floribunda (90.2%) and S. alba (69.7%). Planted seedlings of P. floribunda produced flowers and fruit in their first year, and reproduction was higher in sunny plots than in shady plots. Mortality was high in both planting treatments, and survival rates did not differ significantly in sun and shade (χ 2 =0.48, df = 1, p = 0.490). Three planted seedlings of S. alba survived for 12-16 months but did not reproduce. Floral visitors were observed at C. giffardii and P. floribunda using digital video cameras and recorders. In almost 200 hours of observation, no visitors entered the flowers of C. giffardii , although 1 very small insect, either a micro-wasp (Hymenoptera) or fly (Diptera) was seen on the exterior of a corolla. In almost 300 hours of video observation, 3 floral visitors were identified at P. floribunda flowers. Honeybees ( Apis mellifera ) were likely pollinators, as they contacted both anthers and stigma of flowers. The mean visitation rate of honeybees was 0.003 visit/flower/hour, and visit duration ranged from 2 to 17 seconds. Fruit flies (Drosophilidae of undetermined species) crawled around flower interiors, but did not seem to forage for either nectar or pollen. Fruit fly mean visitation rate was 0.006 visit/flower/hour, and visit duration was 28 to 1,424 seconds. The 3rd observed insect visitor was an endemic geometrid moth caterpillar ( Lophoplusia giffardi ), which was seen feeding on foliage and flowers of P. floribunda . In conclusion, 2 of the 3 regularly-monitored rare plant species of `Ōla`a Forest appeared to have more than 1 limiting factor inhibiting the natural increase in their populations, while for P. floribunda the most important factor was high seedling mortality. Most plants of the monitored C. giffardii population appeared to be hybrids, probably with the more common species C. lysiosepala . Seed germination rates were low, and natural seedlings were not observed. Pollinators were not seen in many hours of observation, indicating that cross pollination is a rare or uncommon event. The re-introduced population of P. floribunda had relatively low mortality, and reproduction was successful with high rates of fruit formation from abundant flowers. Seed germination rates were high, and a soil seed bank was detected. Natural seedling recruitment was observed, but high seedling mortality indicated that this life stage was the most vulnerable in the species. The population of S. alba was small and the vine life form precluded an accurate estimate of the number of adult plants in `Ōla`a Forest. Natural dormancy was likely a factor in the observed low rate of seed germination. No soil seed bank was detected, and alien rodents were implicated as seed predators. Natural recruitment was observed at multiple sites in `Ōla`a, but seedling mortality was high. The cause of seedling mortality was not identified.

Hawaii↗

USGS2009

Influence of a weak field of pulsed DC electricity on the behavior and incidence of injury in adult Steelhead and Pacific Lamprey

Predation by pinnipeds, such as California sea lions Zalophus californianus, Pacific harbor seals Phoca vitulina, and Stellar sea lions Eumetopias jubatus on adult Pacific salmon Oncorhynchus spp in the lower Columbia River has become a serious concern for fishery managers trying to conserve and restore runs of threatened and endangered fish. As a result, Smith-Root, Incorporated (SRI; Vancouver, Washington), manufacturers of electrofishing and closely-related equipment, proposed a project to evaluate the potential of an electrical barrier to deter marine mammals and reduce the amount of predation on adult salmonids (SRI 2007). The objectives of their work were to develop, deploy, and evaluate a passive, integrated sonar and electric barrier that would selectively inhibit the upstream movements of marine mammals and reduce predation, but would not injure pinnipeds or impact anadromous fish migrations. However, before such a device could be deployed in the field, concerns by regional fishery managers about the potential effects of such a device on the migratory behavior of Pacific salmon, steelhead O. mykiss, Pacific lampreys Entoshpenus tridentata, and white sturgeon Acipenser transmontanus, needed to be addressed. In this report, we describe the results of laboratory research designed to evaluate the effects of prototype electric barriers on adult steelhead and Pacific lampreys.

Report↗

USGS1979

Nesting ecology of Arctic loons

Arctic Loons were studied on the Yukon-Kuskokwim Delta, Alaska, from the time of their arrival in May to their departure in September, in 1974 and 1975. Pairs arrived on breeding ponds as soon as sufficient meltwater was available to allow their take-off and landing. Loons apparently do not initiate nests immediately after their arrival, even when nest-sites are available. Delayed egg-laying may be dependent on a period of yolk formation. Delaying yolk formation until after arrival on nest ponds is an adaptation by loons to the variable time suitable habitat becomes available for nesting. Predation of eggs by Glaucous Gulls, Long-tailed and Parasitic jaegers and foxes varied in relation to the location of the nest-site, and the availability of alternate prey. Hatching success was the lowest recorded for Arctic Loons (5%) in 1974, when eggs of both loons and Cackling Geese were taken in large numbers by predators. Hatching success increased to 32% in 1975 when an abundance of tundra voles was observed. No loon eggs hatched after the hatching of the Cackling Goose eggs when this alternate prey was no longer available. Nests destroyed by foxes were predominantly along shorelines, and those by gulls and jaegers were predominantly on islands. Nest-site selection by Arctic Loons may reflect an adaptive response to varying selective pressures by their predators.

Alaska↗

USGS1994

Reproductive and trophic ecology of the soldierfish Myripristis amaena in tropical fisheries

Squirrelfish of the genus Myripristis are valued in small-scale fisheries throughout much of the tropics. The life history and species biology of most of these soldierfishes is poorly known. For the brick soldierfish, M. amaena, in Hawaii and Johnston Atoll, we found that sexual maturity for both sexes was reached between 145 and 160 mm standard length at about six years of age - a large fraction of the apparent maximum size and lifespan. Fecundity was relatively low and increased as the fifth power of body weight. Spawning peaked from about early April to early May, and a secondary peak occurred in September. Myripristis amaena is a nocturnal predator, feeding mostly on meroplankton, especially brachyuran crab megalops, hermit crab larvae, and shrimps, but also taking a variety of benthic prey. In pristine fish communities, holocentrids were abundant, quantitatively important (often dominant) reef predators and prey. Myripristis amaena (and probably other common and important soldierfish) seems to be relatively long lived (at least 14 years), slow growing, and late maturing. The populations suffer considerable natural predation and depend mainly on the largest and oldest fish for reproduction. Heavy, unregulated fishing of these soldierfish, especially at prereproductive size, may severely reduce populations.

Fishery Bulletin↗

USGS2019

Snake River fall chinook salmon life history investigations, 2018 annual report

The following report is divided into three sections each of which describes work conducted by different project cooperators. Chapter One describes smallmouth bass (Micropterus dolomieu) predation on subyearling fall Chinook salmon (Oncorhynchus tshawytscha) in Lower Granite Reservoir in 2018. Smallmouth bass abundance increased seasonally in shoreline habitats and was highest in the lower reach of the reservoir (1,239 fish/km of shoreline). Abundance ranged from 40,743 to 81,595 in 2018. We examined the relationship between smallmouth bass predation and subyearling habitat suitability. Bass abundance was highest in “natural” habitat (i.e., habitat with natural substrate that was not deemed suitable for subyearlings) and fish were generally larger in habitat classified as “suitable” (i.e., habitat deemed suitable rearing) for subyearling Chinook salmon. Subyearlings were present in all habitat types sampled but their abundance was 2–3 times lower in the lower reach of the reservoir. Sand rollers (Percopsis transmontana)—a common prey of smallmouth bass—were present in greatest numbers in “suitable” habitat in the upper reach and “natural” habitat in the middle reservoir reach, but few were observed in the lower reservoir. The total loss of subyearlings to smallmouth bass predation in 2018 (120,023) was slightly less than one-half that of 2016 (266,988) and more than twice that of 2017 (47,830). Total sand roller loss in 2018 (149,106) was slightly more than one-half the losses estimated in 2016 and 2017. Chapter Two describes the feasibility of using stable isotopes of carbon and nitrogen to distinguish hatchery and natural origin subyearling fall Chinook salmon that were consumed by smallmouth bass. A discriminant function was fit from isotopic signatures and fork length from known-origin hatchery and natural subyearlings. The function had an overall correct classification rate of 97.2%. Of subyearlings consumed by smallmouth bass the function correctly classified 94.3% of hatchery fish but only 64.3% of natural fish based on fish origins that were validated with parentage-based tagging (PBT) analysis. Most of the fish consumed by smallmouth bass were of hatchery origin and most of those were of the spring/summer run early in the year and of the fall run later in the year. Based on analysis of known-origin hatchery fish collected at Lower Granite Dam through time following release, using stable isotopes as a discriminatory tool is probably only effective for about two weeks following release, but may have greater utility in unimpounded systems where fish emigrate seaward more quickly. The third section of this report is a Master’s Thesis that covers work conducted under contracts 46273 REL 14 and 79562. The first chapter of the thesis examined growth of subyearling fall Chinook salmon rearing in three sections of the Snake and Clearwater rivers and Lower Granite Reservoir. Growth and food consumption were highest in the reservoir section than in riverine sections, though growth was not significantly higher in the reservoir for the full duration of the study. Julian date was the strongest predictor of growth and consumption, and both growth and consumption decreased over the course of the study, even when accounting for allometric growth effects. Findings suggest that fish rearing in the reservoir section during their early growth period may have an ephemeral energetic advantage relative to fish rearing in natal river sections. The second chapter of the thesis examined the spatial variation in natal river rearing and downstream movement in Snake River fall Chinook salmon. Based on otolith analyses, natal origin was related to differential habitat use with fish from the Clearwater River accruing 48% of their freshwater growth in their natal river compared to 40% for Snake River fish. These differences were associated with different mean size at natal river exit and at ocean entry.

Idaho, Washington, Oregon↗

USGS2023

Monitoring long-term changes in forage fish distribution, abundance and body condition in Prince William Sound

Identifying drivers of change in forage fish populations is key to understanding recovery potential for piscivorous species injured by the Exxon Valdez oil spill, and ecosystem response to natural and anthropogenic perturbations. Forage fish are small pelagic schooling fish such as Pacific capelin (Mallotus catervarius), Pacific sand lance (Ammodytes personatus), Pacific herring (Clupea pallasii), and juvenile walleye pollock (Gadus chalcogrammus) that are prey of many marine predators. Krill (Euphausiidae) are also an important prey taxa sampled in this study. The goals of the Gulf Watch Alaska forage fish monitoring project are to provide information on the population trends of forage species in the Gulf of Alaska and to better understand how underlying predator-prey interactions influence recovering species and the pelagic ecology of Prince William Sound. The main sampling components of the program include acoustic-trawl surveys for forage fish in Prince William Sound during the Fall Integrated Predator-Prey survey (September), and seabird diet sampling at Middleton Island during spring/summer (April – August). We also validate aerial surveys conducted by the Herring Research and Monitoring program (June), and sample summer spawning capelin and sand lance (July) for condition analyses. This work has provided information important to understanding ecosystem response to perturbations in the northern Gulf of Alaska.

Alaska↗

USGS2015

Context of ancient aqueous environments on Mars from in situ geologic mapping at Endeavour Crater

Using the Mars Exploration Rover Opportunity , we have compiled one of the first field geologic maps on Mars while traversing the Noachian terrain along the rim of the 22 km diameter Endeavour Crater (Latitude −2°16′33″, Longitude −5°10′51″). In situ mapping of the petrographic, elemental, structural, and stratigraphic characteristics of outcrops and rocks distinguishes four mappable bedrock lithologic units. Three of these rock units predate the surrounding Burns formation sulfate-rich sandstones and one, the Matijevic Formation, represents conditions on early Mars predating the formation of Endeavour Crater. The stratigraphy assembled from these observations includes several geologic unconformities. The differences in lithologic units across these unconformities record changes in the character and intensity of the Martian aqueous environment over geologic time. Water circulated through fractures in the oldest rocks over periods long enough that texturally and elementally significant alteration occurred in fracture walls. These oldest pre-Endeavour rocks and their network of mineralized and altered fractures were preserved by burial beneath impact ejecta and were subsequently exhumed and exposed. The alteration along joints in the oldest rocks and the mineralized veins and concentrations of trace metals in overlying lithologic units is direct evidence that copious volumes of mineralized and/or hydrothermal fluids circulated through the early Martian crust. The wide range in intensity of structural and chemical modification from outcrop to outcrop along the crater rim shows that the ejecta of large (>8 km in diameter) impact craters is complex. These results imply that geologic complexity is to be anticipated in other areas of Mars where cratering has been a fundamental process in the local and regional geology and mineralogy.

Journal of Geophysical Research E: Planets↗

USGS2023

A field test of R package GPSeqClus: For establishing animal location clusters

The ability to track animals with Global Positioning System (GPS) collars opened an enormous potential for studying animal movements and behaviour in their natural environment. One such endeavour is to identify clusters of GPS locations as a way to estimate predator kill rate. Clapp et al. (2021) developed an R package ( GPSeqClus ) to assess a location dataset based on user-defined parameters to identify clusters and their characteristics. These characteristics can then help to distinguish resting-site clusters from kill sites of their large (>50 kg) prey. We identified location clusters of an adult male wolf Canis lupus on Ellesmere Island, Nunavut, Canada in July 2009 and tracked him until he died in April 2010. Identifying location clusters was challenging because the collar only obtained two GPS locations per day (12 h apart). In July 2010, we searched 30 of 52 location-clusters we identified as kill/scavenge sites and found 17 of them as such, given they had muskox Ovibos moschatus or caribou Rangifer tarandus pearyi remains nearby. We also documented five wolf rendezvous sites, two den sites, and the wolf's death site to total 60 location-clusters in all. We used a two-step process in testing the R Package GPSeqClus (hereafter GPSeqClus ): (1) compare the number of clusters our method discerned with the number identified by the new algorithm, and (2) compare the number of biologically significant clusters (e.g. den sites, kill/feeding sites) we found with the number the new algorithm located. We made these tests with GPSeqClus by varying the search radius, number of days at a site, and minimum number of locations required for a cluster. GPSeqClus compared well to our technique, with the best sub-algorithm among the 25 we tested only missing three of our identified clusters and yielding six additional clusters. GPSeqClus identified 16 of the 17 confirmed sites of remains, all wolf home sites, and the wolf's carcass site. Identifying clusters using a 500-m search radius, a 1.5-day window, and a minimum of two GPS locations per cluster was suitable for a coarse GPS acquisition rate of two locations per day when prey are large, such as muskox or caribou. Given that GPSeqClus performed well with our coarse location dataset, we expect it will also perform even better with a collar acquiring more than two locations per day. Having a field-tested utility such as GPSeqClus will enhance carnivore predation studies elsewhere.

Ecological Solutions and Evidence↗

USGS2018

Survival of whirling disease resistant rainbow trout fry in the wild: A comparison of two strains

Introduced pathogens can affect fish populations, and three main factors affect disease occurrence: the environment, host, and pathogen. Manipulating at least one of these factors is necessary for controlling disease. Myxobolus cerebralis , the parasite responsible for salmonid whirling disease, became established in Colorado during the 1990s and caused significant declines in wild Rainbow Trout Oncorhynchus mykiss populations. Attempts to re-establish Rainbow Trout have focused on manipulating salmonid host resistance. A Rainbow Trout strain known as GR × CRR was developed for stocking in Colorado by crossing a whirling-disease-resistant strain known as the German Rainbow Trout (GR) with the Colorado River Rainbow Trout (CRR). The GR × CRR fish exhibit resistance similar to that shown by GR, and survival and reproduction were expected to be similar to those of CRR. One disadvantage of stocking GR × CRR is that outcrossing and backcrossing could decrease resistance, and laboratory studies have indicated that this can occur. A potential disadvantage of stocking pure GR is lower survival due to domestication. To compare fry survival between the strains, a field experiment was conducted in 1.6-km reaches of nine Colorado streams. Each stream was stocked in August 2014 with 5,000 GR × CRR and 5,000 GR individuals. In October 2014, April 2015, and August 2015, apparent survival was assessed. Two laboratory predation experiments were also conducted. The field experiment revealed that short-term apparent survival was influenced by stream, and growth rate was influenced by strain and stream. However, after 12 months, there was no difference in apparent survival or growth rate between the GR and GR × CRR strains. Laboratory experiments showed that survival did not differ between the strains when confronted with Brown Trout Salmo trutta predation. Our results indicate that the GR strain is a viable option for stocking in streams where M. cerebralis is enzootic. Further evaluation is needed to determine whether GR fish will survive to maturity and reproduce.

Journal of Aquatic Animal Health↗

USGS2019

Evaluating community-level response to management actions across a diverse Hawaiian forest bird community

Although species‐specific approaches are necessary to understand the dynamics of individual species composing a community, they do not offer a framework for making optimal management decisions at the community level. Here, we present a simple framework for comparing the response of entire communities to multiple management scenarios. Our approach uses a weighted average of standardized species‐specific responses to produce a single integrative measure of the community response and employs mixed‐effect linear models to quantify the increase in the community response due to each management action, or combination of actions. We demonstrate our approach with a simulation study assessing the potential benefits of multiple management actions on the avian community of Hakalau Forest National Wildlife Refuge, Hawaiʻi, which is composed of eight native species with conservation status varying from endangered to least concern. Management actions considered included a reduction of avian malaria transmission risk, reducing rat predation, and increasing forest habitat. We used three different prioritization (weighting) schemes to assess whether the response to management actions differed along a conservation gradient (from endangered to least concern). We also investigated whether future changes in disease distribution as a result of climate change will alter the relationship between management practices and community response. Our community‐level analysis produced three important insights, highlighting the need to consider the response from multiple species to changing threats and management actions. First, increasing the amount of habitat always had the greatest positive impact on the avian community, regardless of the weighting scheme. Second, the community response to management was different under current vs. future conditions, with increased benefit in the future when disease risks were higher. Third, the response to management varied along the conservation gradient. Reducing malaria transmission risk in 2100 had the greatest benefit to endangered species, while increasing forest habitat had the greatest benefit to “least concern” species. However, reducing rat predation appeared to benefit a subset of species based on ecological factors unrelated to rarity, such as nest accessibility. Our approach is widely applicable using experimental, observational, or simulation‐based data, allowing managers to consider the response of all species while weighting their priority levels.

Hawaii↗

USGS2026

Modeling species co-occurrence effects to inform invasive barred owl management and recovery of the northern spotted owl

Robust estimation of wildlife populations represents a cornerstone of wildlife research and provides critical information to guide management, including identifying at-risk species, setting harvest rates, and evaluating predator and invasive species control programs. Efforts to enhance population estimation have long included influences one species may have on another, beginning with direct effects of predation on prey populations. More recently, researchers have incorporated co-occurrence effects, such as fear of a competitor, into Lotka–Volterra competition models to generate more robust wildlife population estimates. Here, we introduce two modified Lotka–Volterra competition models, which incorporate one- and two-way co-occurrence effects, to estimate populations of two competing species. Using the test case of northern spotted ( Strix occidentalis caurina ) and barred owl ( Strix varia ) populations in the Pacific Northwest region of the United States, we evaluate if these new co-occurrence models can generate more robust population estimates than previous models. We then evaluate if potential co-occurrence effects among barred and northern spotted owls are uni- or bidirectional. Lastly, we leverage the best-performing model to evaluate the degree to which a recently proposed barred owl culling program may help recover northern spotted owl populations. Our model results suggest that incorporating co-occurrence effects improves model fit compared to classical Lotka–Volterra competition models. We found strong evidence for unidirectional co-occurrence effects of barred owls on northern spotted owls, but not vice versa. Our simulations of barred owl culling suggest that barred owls would need to be culled from approximately 40% of all occupied barred owl territories each year to reverse ongoing northern spotted owl population declines.

Oregon↗

USGS2023

Saproxylic beetles' morphological traits and higher trophic guilds indicate boreal forest naturalness

Forests contribute to numerous ecosystem functions and services and contain a large proportion of terrestrial biodiversity, but they are being negatively impaced by anthropogenic activities. Forests that have never been clear-cut and have old growth characteristics, termed “near-natural,” often harbor different and richer species assemblages than managed forests. Alternative management strategies may be able to balance the needs of biodiversity with the demands of forestry, but evaluation efforts are limited by the challenges of measuring biodiversity. Species richness is frequently used as a simple measure of biodiversity, but research indicates that it may not adequately capture community-level changes. Alternatively, trait-based measures of biodiversity may prove to be useful, but research is lacking. In this paper, we use a large dataset that includes 339 obligate saproxylic beetle species collected over a decade in the boreal region throughout southern Norway to: (1) establish if there is a difference in beetle community composition between near-natural and managed forests; and (2) determine which measures of beetle biodiversity best indicate forest naturalness. We arranged the sites in an ordination space and tested for differences in community composition between these forest types. We also tested different measures of biodiversity to determine which were the most predictive of forest naturalness. We found a clear difference in community composition between near-natural and managed forests. Additionally, three measures of biodiversity were most predictive of forest naturalness: proportional abundance of predators, community weighted mean (CWM) of wing length, and CWM of body roundness. The probability that a forest was near-natural increased with the proportional abundance of predators but decreased with CWM wing length and body roundness. Although species richness was higher in near-natural forests, the effect was not significant. Overall, our findings underscore the conservation value of near-natural forests and highlight the potential of several measures of biodiversity for determining forest quality.

Ecology and Evolution↗