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A Great Lakes atmospheric mercury monitoring network: evaluation and design

As many as 51 mercury (Hg) wet-deposition-monitoring sites from 4 networks were operated in 8 USA states and Ontario, Canada in the North American Great Lakes Region from 1996 to 2010. By 2013, 20 of those sites were no longer in operation and approximately half the geographic area of the Region was represented by a single Hg-monitoring site. In response, a Great Lakes Atmospheric Mercury Monitoring (GLAMM) network is needed as a framework for regional collaboration in Hg-deposition monitoring. The purpose of the GLAMM network is to detect changes in regional atmospheric Hg deposition related to changes in Hg emissions. An optimized design for the network was determined to be a minimum of 21 sites in a representative and approximately uniform geographic distribution. A majority of the active and historic Hg-monitoring sites in the Great Lakes Region are part of the National Atmospheric Deposition Program (NADP) Mercury Deposition Network (MDN) in North America and the GLAMM network is planned to be part of the MDN. To determine an optimized network design, active and historic Hg-monitoring sites in the Great Lakes Region were evaluated with a rating system of 21 factors that included characteristics of the monitoring locations and interpretations of Hg data. Monitoring sites were rated according to the number of Hg emissions sources and annual Hg emissions in a geographic polygon centered on each site. Hg-monitoring data from the sites were analyzed for long-term averages in weekly Hg concentrations in precipitation and weekly Hg-wet deposition, and on significant temporal trends in Hg concentrations and Hg deposition. A cluster analysis method was used to group sites with similar variability in their Hg data in order to identify sites that were unique for explaining Hg data variability in the Region. The network design included locations in protected natural areas, urban areas, Great Lakes watersheds, and in proximity to areas with a high density of annual Hg emissions and areas with high average weekly Hg wet deposition. In a statistical analysis, relatively strong, positive correlations in the wet deposition of Hg and sulfate were shown for co-located NADP Hg-monitoring and acid-rain monitoring sites in the Region. This finding indicated that efficiency in regional Hg monitoring can be improved by adding new Hg monitoring to existing NADP acid-rain monitoring sites. Implementation of the GLAMM network design will require Hg-wet-deposition monitoring to be: (a) continued at 12 MDN sites active in 2013 and (b) restarted or added at 9 NADP sites where it is absent in 2013. Ongoing discussions between the states in the Great Lakes Region, the Lake Michigan Air Directors Consortium (a regional planning entity), the NADP, the U.S. Environmental Protection Agency, and the U.S. Geological Survey are needed for coordinating the GLAMM network.

Great Lakes↗

Nearshore survey and cleanup of benthic marine debris using citizen science divers along the Mediterranean coast of Israel

Information on marine debris along the Mediterranean coast of Israel, especially on the seafloor, is limited. Many recreational divers are enthusiasts of marine conservation and can thus contribute to data collection which does not require highly specialized training. The Society for the Protection of Nature in Israel together with The Israeli Diving Federation established the diver volunteer program “Sea Guard” (“Mishmar Hayam” in Hebrew), which supports marine conservation through citizen science. The divers were trained in marine ecology and survey methods to conduct independent surveys and lead underwater cleanups. For the first time, we have described the patterns of benthic debris density and composition in the nearshore environment of the southeastern part of the Mediterranean Sea. We found that benthic marine debris in the nearshore along the Israeli Mediterranean coast is primarily plastic, likely originating from the use of local beaches. Fishing, boating and domestic activities also play an important role as sources for marine debris. The currents' regime prevented the debris from accumulating on the seafloor in the nearshore environment, with the exception of several “debris traps”. Our findings will be useful for the development of programs to improve coastal waste management.

Ocean and Coastal Management↗

Limitations in the use of commercial humic acids in water and soil research

Seven samples of commercial "humic acids", purchased from five different suppliers, were studied, and their characteristics were compared with humic and fulvic acids isolated from streams, soils, peat, leonardite, and a dopplerite sample. Cross-polarization and magic-angle spinning 13C NMR spectroscopy clearly shows pronounced differences between the commercial materials and all other samples. Elemental and infrared spectroscopic data do not show such clear-cut differences but can be used as supportive evidence, with the 13C NMR data, to substantiate the above distinctions. As a result of these differences and due to the general lack of information relating to the source, method of isolation, or other pretreatment of the commercial materials, these commercial products are not considered to be appropriate for use as analogues of true soil and water humic substances, in experiments designed to evaluate the nature and reactivity of humic substances in natural waters and soils.

Environmental Science & Technology↗

Selective preservation and origin of petroleum-forming aquatic kerogen

Studies of a marine algal sapropel from Mangrove Lake, Bermuda, by 13C NMR and stable carbon isotopic methods show that precursors of aquatic kerogen (insoluble, macromolecular, paraffinic humic substances) are primary components of algae and possibly associated bacteria and that these substances survive microbial decomposition and are selectively preserved during early diagenesis. ?? 1983 Nature Publishing Group.

Nature↗

Blood from a turnip: tissue origin of low-coverage shotgun sequencing libraries affects recovery of mitogenome sequences

Next generation sequencing methods allow rapid, economical accumulation of data that have many applications, even at relatively low levels of genome coverage. However, the utility of shotgun sequencing data sets for specific goals may vary depending on the biological nature of the samples sequenced. We show that the ability to assemble mitogenomes from three avian samples of two different tissue types varies widely. In particular, data with coverage typical of microsatellite development efforts (∼1×) from DNA extracted from avian blood failed to cover even 50% of the mitogenome, relative to at least 500-fold coverage from muscle-derived data. Researchers should consider possible applications of their data and select the tissue source for their work accordingly. Practitioners analyzing low-coverage shotgun sequencing data (including for microsatellite locus development) should consider the potential benefits of mitogenome assembly, including internal barcode verification of species identity, mitochondrial primer development, and phylogenetics.

Mitochondrial DNA↗

Collection, processing, and interpretation of ground-penetrating radar data to determine sediment thickness at selected locations in Deep Creek Lake, Garrett County, Maryland, 2007

The U.S. Geological Survey collected geophysical data in Deep Creek Lake in Garrett County, Maryland, between September 17 through October 4, 2007 to assist the Maryland Department of Natural Resources to better manage resources of the Lake. The objectives of the geophysical surveys were to provide estimates of sediment thickness in shallow areas around the Lake and to test the usefulness of three geophysical methods in this setting. Ground-penetrating radar (GPR), continuous seismic-reflection profiling (CSP), and continuous resistivity profiling (CRP) were attempted. Nearly 90 miles of GPR radar data and over 70 miles of CSP data were collected throughout the study area. During field deployment and testing, CRP was determined not to be practical and was not used on a large scale. Sediment accumulation generally could be observed in the radar profiles in the shallow coves. In some seismic profiles, a thin layer of sediment could be observed at the water bottom. The radar profiles appeared to be better than the seismic profiles for the determination of sediment thickness. Although only selected data profiles were processed, all data were archived for future interpretation. This investigation focused on selected regions of the study area, particularly in the coves where sediment accumulations were presumed to be thickest. GPR was the most useful tool for interpreting sediment thickness, especially in these shallow coves. The radar profiles were interpreted for two surfaces of interest-the water bottom, which was defined as the "2007 horizon," and the interface between Lake sediments and the original Lake bottom, which was defined as the "1925 horizon"-corresponding to the year the Lake was impounded. The ground-penetrating radar data were interpreted on the basis of characteristics of the reflectors. The sediments that had accumulated in the impounded Lake were characterized by laminated, parallel reflections, whereas the subsurface below the original Lake bottom was characterized by more discontinuous and chaotic reflections, often with diffractions indicating cobbles or boulders. The reflectors were picked manually along the water bottom and along the interface between the Lake sediments and the pre-Lake sediments. A simple graphic approach was used to convert traveltimes to depth through water and depth through saturated sediments using velocities of the soundwaves through the water and the saturated sediments. Nineteen cross sections were processed and interpreted in 9 coves around Deep Creek Lake, and the difference between the 2007 horizon and the 1925 horizon was examined. In most areas, GPR data indicate a layer of sediment between 1 and 7 feet thick. When multiple cross sections from a single cove were compared, the cross sections indicated that sediment thickness decreased toward the center of the Lake.

Maryland↗

Synthesis of natural flows at selected sites in and near the Milk River basin, Montana, 1928-89

Natural monthly streamflows were synthesized for the years 1928-89 at 2 sites in the St. Mary River Basin and 11 sites in the Milk River Basin in north- central Montana. The sites are represented as nodes in a streamflow accounting model being developed by the Bureau of Reclamation for the Milk River Basin. Recorded flows at most sites have been affected by human activities, including reservoir storage and irrigation diversions. The flows at the model nodes were corrected for the effects of these activities to obtain synthesized flows. The synthesized flows at nodes with seasonal and short-term records were extended using a statistical technique. The methods of synthesis varied, depending on upstream activities and information available. Flows at sites in the St. Mary River Basin and at the Milk River at Eastern Crossing of International Boundary pre- viously had been synthesized. The flows at mainstem sites downstream from the Milk River at Eastern Crossing were synthesized by adding synthesized natural runoff from intervening drainage areas to natural flows for Milk River at Eastern Crossing. Natural runoff from intervening drainage areas was estimated by multiplying recorded flows at selected index gaging stations on tributary streams by the ratio of the intervening drainage area to the combined drainage area of the index stations. The recorded flows for Milk River at Western Crossing of International Boundary and for Peoples Creek near Dodson, Montana, were assumed to be natural flows. The synthesized annual flows at the mouth of the Milk River compared favorably with the recorded flows near the mouth when the effects of upstream irrigation were considered.

Water-Resources Investigations Report↗

Modelling development of riparian ranchlands using ecosystem services at the Aravaipa Watershed, SE Arizona

This paper describes how subdivision and development of rangelands within a remote and celebrated semiarid watershed near the US-Mexico border might affect multiple ecohydrological services provided, such as recharge of the aquifer, water and sediment yield, water quality, flow rates and downstream cultural and natural resources. Specifically, we apply an uncalibrated watershed model and land-change forecasting scenario to consider the potential effects of converting rangelands to housing developments and document potential changes in hydrological ecosystem services. A new method to incorporate weather data in watershed modelling is introduced. Results of introducing residential development in this fragile arid environment portray changes in the water budget, including increases in surface-water runoff, water yield, and total sediment loading. Our findings also predict slight reductions in lateral soil water, a component of the water budget that is increasingly becoming recognized as critical to maintaining water availability in arid regions. We discuss how the proposed development on shrub/scrub rangelands could threaten to sever imperative ecohydrological interactions and impact multiple ecosystem services. This research highlights rangeland management issues important for the protection of open-space, economic valuation of rangeland ecosystem services, conservation easements, and incentives to develop markets for these.

Arizona↗

The Colorado Plateau V: research, environmental planning, and management for collaborative conservation

Roughly centered on the Four Corners region of the southwestern United States, the Colorado Plateau covers some 130,000 square miles of sparsely vegetated plateaus, mesas, canyons, arches, and cliffs in Arizona, Utah, Colorado, and New Mexico. With elevations ranging from 3,000 to 14,000 feet, the natural systems found within the plateau are dramatically varied, from desert to alpine conditions.This volume, the fifth from the University of Arizona Press and the tenth overall, focuses on adaptation of resource management and conservation to climate change and water scarcity, protecting biodiversity through restructured energy policies, ensuring wildlife habitat connectivity across barriers, building effective conservation networks, and exploring new opportunities for education and leadership in conservation science.An informative read for people interested in the conservation and natural history of the region, the book will also serve as a valuable reference for those people engaged in the management of cultural and biological resources of the Colorado Plateau, as well as scientists interested in methods and tools for land and resource management throughout the West.

Book↗

Employing an ecosystem services framework to deliver decision ready science

Public land managers have limited information to allow for the integration and balancing of multiple objectives in land management decisions including the social (cultural and health), economic (monetary and nonmonetary), and environmental aspects. In this article, we document an approach to consider the many facets of decision making by incorporating them into a decision context using an ecosystem services framework. This analysis is based on a multi-partner project led by the US Geological Survey and the US Fish and Wildlife Service to provide land management decision support for the Great Dismal Swamp National Wildlife Refuge. It is an integrated ecologic-economic analysis of baseline (current) and potential future quantities, qualities, and values of selected ecosystem services from the Refuge. Alternative management scenarios are modeled to consider the impact of specific management actions or natural disturbances on priority ecosystem services. We examine the benefits and challenges of using this framework. Key lessons learned from this effort include the mismatch in timing between physical and social science; the challenge of integrating methods from multiple disciplines; the importance of frequent communication to overcome siloed research; and the utility of an integrating framework for ecosystem services and supporting tools such as the dynamic ecosystem model.

Advances in Ecological Research↗

Suspended sediment and fisheries: An exploration of empirical relationships

Objective: Sediment has an important role in aquatic ecosystems, however, excess sediment can negatively impact fish and other aquatic life. Quantifying the response of aquatic life, particularly fish, to suspended sediment is important for natural resource managers tasked with developing sediment management guidelines to protect aquatic ecosystems. Our goal was to assess the ability of established, revised, and alternate severity of ill effect (SEV) dose-response models to predict the impact of suspended sediment on fish. Methods: We synthesized existing literature to develop an expansive dataset that relates suspended sediment concentration and exposure duration to biological effects on fishes and assessed the predictive ability of established and revised SEV dose-response models. We investigated potential sources of variation in biological responses to suspended sediment dose and explored two alternative approaches for assessing the effects of suspended sediment on fish: 90th quantile SEV dose-response regression models and logistic SEV dose-response models. Results: We found that both established and revised linear SEV dose-response models poorly quantify fish biological response to suspended sediment. Quantile SEV dose-response regressions also performed poorly. More promising are logistic dose-response models that identify sediment thresholds where major effects of sediment on fish can be expected to occur. We demonstrate that fish biological response to suspended sediment is modulated by sediment particle size, water temperature, and dissolved oxygen levels, suggesting additional environmental and biological variables to consider when evaluating the effects of suspended sediment on fish. Conclusion: We contribute revised and novel empirically derived tools for predicting the effects of suspended sediment on fish and demonstrate how environmental variables and life stage may modulate fish biological response. Our work illustrates challenges associated with predictive modeling and some potential sources of variation. While empirical models integrating biological stress response to suspended sediment may help natural resource managers capture potential impacts of this stressor, a cautious approach that considers co-acting stressors may be most effective for sediment management that is protective of fish.

North American Journal of Fisheries Management↗

Methods of practice and guidelines for using survey-grade global navigation satellite systems (GNSS) to establish vertical datum in the United States Geological Survey

Geodetic surveys have evolved through the years to the use of survey-grade (centimeter level) global positioning to perpetuate and post-process vertical datum. The U.S. Geological Survey (USGS) uses Global Navigation Satellite Systems (GNSS) technology to monitor natural hazards, ensure geospatial control for climate and land use change, and gather data necessary for investigative studies related to water, the environment, energy, and ecosystems. Vertical datum is fundamental to a variety of these integrated earth sciences. Essentially GNSS surveys provide a three-dimensional position x, y, and z as a function of the North American Datum of 1983 ellipsoid and the most current hybrid geoid model. A GNSS survey may be approached with post-processed positioning for static observations related to a single point or network, or involve real-time corrections to provide positioning "on-the-fly." Field equipment required to facilitate GNSS surveys range from a single receiver, with a power source for static positioning, to an additional receiver or network communicated by radio or cellular for real-time positioning. A real-time approach in its most common form may be described as a roving receiver augmented by a single-base station receiver, known as a single-base real-time (RT) survey. More efficient real-time methods involving a Real-Time Network (RTN) permit the use of only one roving receiver that is augmented to a network of fixed receivers commonly known as Continually Operating Reference Stations (CORS). A post-processed approach in its most common form involves static data collection at a single point. Data are most commonly post-processed through a universally accepted utility maintained by the National Geodetic Survey (NGS), known as the Online Position User Service (OPUS). More complex post-processed methods involve static observations among a network of additional receivers collecting static data at known benchmarks. Both classifications provide users flexibility regarding efficiency and quality of data collection. Quality assurance of survey-grade global positioning is often overlooked or not understood and perceived uncertainties can be misleading. GNSS users can benefit from a blueprint of data collection standards used to ensure consistency among USGS mission areas. A classification of GNSS survey qualities provide the user with the ability to choose from the highest quality survey used to establish objective points with low uncertainties, identified as a Level I, to a GNSS survey for general topographic control without quality assurance, identified as a Level IV. A Level I survey is strictly limited to post-processed methods, whereas Level II, Level III, and Level IV surveys integrate variations of a RT approach. Among these classifications, techniques involving blunder checks and redundancy are important, and planning that involves the assessment of the overall satellite configuration, as well as terrestrial and space weather, are necessary to ensure an efficient and quality campaign. Although quality indicators and uncertainties are identified in post-processed methods using CORS, the accuracy of a GNSS survey is most effectively expressed as a comparison to a local benchmark that has a high degree of confidence. Real-time and post-processed methods should incorporate these "trusted" benchmarks as a check during any campaign. Global positioning surveys are expected to change rapidly in the future. The expansion of continuously operating reference stations, combined with newly available satellite signals, and enhancements to the conterminous geoid, are all sufficient indicators for substantial growth in real-time positioning and quality thereof.

Techniques and Methods↗

Opportunities for improved consideration of cultural benefits in environmental decision-making

Many cultural benefits of ecosystem services (ES) are difficult to capture in standard ES assessments. Scholars and practitioners often respond to this gap by seeking to develop new scientific methods to capture and integrate the plural values associated with diverse cultural benefits categories. This increasing emphasis on value pluralism represents an essential step toward recognitional justice within ES theory and practice. However, current approaches continue to rest on the assumption that ES-knowledge is only made available to decision-makers through scientific documentation. As a result, scholars and decision-makers fail to account for the role of knowledge pluralism as a core element of recognitional justice, and a key enabling factor for meaningful consideration of the plural values linked to cultural benefits of ES. In this paper, we contribute to a pluralist theory of cultural-benefits-knowledge, and ES-knowledge more broadly. Using a critical interpretive synthesis of environmental management literature, we conceptualize a wider range of knowledge forms that convey cultural benefits, based on the knowledge-as-practice concept in addition to the knowledge-as-product concept more familiar to Western actors. As part of the synthesis, we explore when and how diverse forms of cultural-benefits-knowledge intersect with decision-making processes, and the value aspects and categories of cultural benefits most frequently conveyed by each form of knowledge. Our synthesizing argument offers a critique of the concept of “ES-knowledge-use,” proposing a shift in focus toward “learning opportunities” that exist across phases of decision-making. We demonstrate that attention to a greater diversity of knowledge forms (knowledge pluralism), and a fuller spectrum of opportunities to integrate them (learning opportunities) can support more meaningful consideration of the plural values associated with cultural benefits of ES (value pluralism). In combination, attention to knowledge pluralism and value pluralism can help bring the ES approach into alignment with environmental justice through the recognition and legitimization of multiple identities, well-beings, and human-nature relationships, as reflected in meaningful consideration of the diverse cultural benefits of ES.

Ecosystem Services↗

Spatial capture–recapture with random thinning for unidentified encounters

Spatial capture–recapture (SCR) models have increasingly been used as a basis for combining capture–recapture data types with variable levels of individual identity information to estimate population density and other demographic parameters. Recent examples are the unmarked SCR (or spatial count model), where no individual identities are available and spatial mark–resight (SMR) where individual identities are available for only a marked subset of the population. Currently lacking, though, is a model that allows unidentified samples to be combined with identified samples when there are no separate classes of “marked” and “unmarked” individuals and when the two sample types cannot be considered as arising from two independent observation models. This is a common scenario when using noninvasive sampling methods, for example, when analyzing data on identified and unidentified photographs or scats from the same sites. Here we describe a “random thinning” SCR model that utilizes encounters of both known and unknown identity samples using a natural mechanistic dependence between samples arising from a single observation model. Our model was fitted in a Bayesian framework using NIMBLE. We investigate the improvement in parameter estimates by including the unknown identity samples, which was notable (up to 79% more precise) in low‐density populations with a low rate of identified encounters. We then applied the random thinning SCR model to a noninvasive genetic sampling study of brown bear ( Ursus arctos ) density in Oriental Cantabrian Mountains (North Spain). Our model can improve density estimation for noninvasive sampling studies for low‐density populations with low rates of individual identification, by making use of available data that might otherwise be discarded.

Ecology & Evolution↗

Trap style influences wild pig behavior and trapping success

Despite the efforts of many natural resource professionals, wild pig ( Sus scrofa ) populations are expanding in many areas of the world. Although many creative techniques for controlling pig populations are being explored, trapping has been and still is the most commonly used method of population control for many public and private land managers. We conducted an observational study to examine the efficiency of 2 frequently used trap styles: a small, portable box‐style trap and a larger, semi‐permanent, corral‐style trap. We used game cameras to examine patterns of trap entry by wild pigs around each style of trap, and we conducted a trapping session to compare trapping success between trap styles. Adult female and juvenile wild pigs entered both styles of trap more readily than did adult males, and adult males seemed particularly averse to entering box traps. Less than 10% of adult male visits to box traps resulted in entries, easily the least percentage of any class at any style of trap. Adult females entered corral traps approximately 2.2 times more often per visit than box traps and re‐entered corral traps >2 times more frequently. Juveniles entered and re‐entered both box and corral traps at similar rates. Overall (all‐class) entry‐per‐visit rates at corral traps (0.71) were nearly double that of box traps (0.37). Subsequent trapping data supported these preliminary entry data; the capture rate for corral traps was >4 times that of box traps. Our data suggest that corral traps are temporally and economically superior to box traps with respect to efficiency; that is, corral traps effectively trap more pigs per trap night at a lower cost per pig than do box traps

Georgia↗

An index of reservoir habitat impairment

Fish habitat impairment resulting from natural and anthropogenic watershed and in-lake processes has in many cases reduced the ability of reservoirs to sustain native fish assemblages and fisheries quality. Rehabilitation of impaired reservoirs is hindered by the lack of a method suitable for scoring impairment status. To address this limitation, an index of reservoir habitat impairment (IRHI) was developed by merging 14 metrics descriptive of common impairment sources, with each metric scored from 0 (no impairment) to 5 (high impairment) by fisheries scientists with local knowledge. With a plausible range of 5 to 25, distribution of the IRHI scores ranged from 5 to 23 over 482 randomly selected reservoirs dispersed throughout the USA. The IRHI reflected five impairment factors including siltation, structural habitat, eutrophication, water regime, and aquatic plants. The factors were weakly related to key reservoir characteristics including reservoir area, depth, age, and usetype, suggesting that common reservoir descriptors are poor predictors of fish habitat impairment. The IRHI is rapid and inexpensive to calculate, provides an easily understood measure of the overall habitat impairment, allows comparison of reservoirs and therefore prioritization of restoration activities, and may be used to track restoration progress. The major limitation of the IRHI is its reliance on unstandardized professional judgment rather than standardized empirical measurements. ?? 2010 US Government.

Environmental Monitoring and Assessment↗

Sediment source fingerprinting as an aid to large-scale landscape conservation and restoration: A review for the Mississippi River Basin

Reliable quantitative information on sediment sources to rivers is critical to mitigate contamination and target conservation and restoration actions. However, the determination of the relative importance of sediment sources is complicated at the scale of large river basins by immense variability in erosional processes and sediment sources over space and time, heterogeneity in sediment transport and deposition, and a paucity of sediment monitoring data. Sediment source fingerprinting is an increasingly adopted field-based technique that identifies the nature and relative source contribution of sediment transported in waterways. Notably, sediment source fingerprinting provides information that is independent of other field, modeling, or remotely sensed techniques. However, the diversity in sediment fingerprinting sampling, analytical, and interpretive methods has been recognized as a problem in terms of developing standardized procedures for its application at the scale of large river basins. Accordingly, this review focuses on established sediment source fingerprinting studies conducted within the Mississippi River Basin (MRB), summarizes unique information provided by sediment source fingerprinting that is distinct from traditional monitoring techniques, evaluates consistency and reliability of methodological approaches among MRB studies, and provides prospects for the use of the sediment source fingerprinting technique as an aid to large-scale landscape conservation and restoration under current management frameworks. Most established MRB studies got creditable fingerprinting results and considered near-channel sources as the dominant sediment sources in most cases, while the comparability of their results suffers from a lack of standardization in procedural steps. Findings from MRB studies demonstrate that sediment source fingerprinting is a highly valuable and reliable sediment source assessment approach to assist land and water resource management under current management frameworks, but efforts are still needed to make this technique ready to be used in a more predominant way in large-scale landscape conservation and restoration efforts. We summarized research needs and suggested the best fingerprinting practices for management purposes with the aim of ensuring that this technique is as robust and reliable as it moves forward.

Mississippi River Basin↗