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USGS2026

Describing the seasonal abundance and growth rates of larval fishes across productivity gradients in Lake Huron in 2017

Several of the Laurentian Great Lakes, including Lake Huron, have undergone oligotrophication in the past decades and prey fish biomass has concomitantly declined. One potential mechanism to explain declines in prey fish is slower growth and lower survival at the larval stage. To determine whether reduced productivity affects the growth of larval fish, we sampled larval fishes and their environment approximately monthly from May through August 2017 at nine nearshore to offshore transects across Lake Huron that included North Channel, Georgian Bay, and the main basin. North Channel transects had the highest chlorophyll a concentrations and zooplankton densities. Rainbow smelt ( Osmerus mordax ), burbot ( Lota lota ), bloater ( Coregonus hoyi ), and shiners ( Notropis spp.) were the most abundant larval fish taxa, peaking in June and July. We aged rainbow smelt and bloater using otoliths, and estimates of growth rate revealed rainbow smelt always grew faster. For both species, we explained variation in total length by comparing 16 candidate linear mixed-effects models, with age, chlorophyll a , zooplankton, water temperature, larval fish density, and interactions with age as predictor variables. For rainbow smelt, the full model was best; zooplankton had the greatest effect, but it was negative and opposite from our hypothesis. For bloater, four candidate models were most parsimonious; water temperature had the greatest effect, and it was positive as predicted from our hypothesis. To more effectively evaluate whether zooplankton can limit larval fish growth and survival, we recommend that future designs conduct more frequently sampling within a year even at the expense of fewer transects.

Lake Huron↗
USGS2011

Nest survival of American Coots relative to grazing, burning, and water depths

Water and emergent vegetation are key features influencing nest site selection and success for many marsh-nesting waterbirds. Wetland management practices such as grazing, burning, and water-level manipulations directly affect these features and can influence nest survival. We used model selection and before-after-control-impact approaches to evaluate the effects of water depth and four common land-management practices or treatments, i.e., summer grazing, fall grazing, fall burning, and idle (no active treatment) on nest survival of American coots ( Fulica americana ) nesting at Grays Lake, a large montane wetland in southeast Idaho. The best model included the variables year × treatment, and quadratic functions of date, water depth, and nest age; height of vegetation at the nest did not improve the best model. However, results from the before-after-control-impact analysis indicate that management practices affected nest success via vegetation and involved interactions of hydrology, residual vegetation, and habitat composition. Nest success in idled fields changed little between pre- and post-treatment periods, whereas nest success declined in fields that were grazed or burned, with the most dramatic declines the year following treatments. The importance of water depth may be amplified in this wetland system because of rapid water-level withdrawal during the nesting season. Water and land-use values for area ranchers, management for nesting waterbirds, and long-term wetland function are important considerations in management of water levels and vegetation.

Avian Conservation and Ecology↗
USGS2021

South Africa's experimental fisheries closures and recovery of the endangered African penguin

In a scientifically-transformative project, South Africa implemented a decade-long field experiment to understand how fisheries may be affecting its most iconic seabird, the African penguin Spheniscus demersus. This unique effort prohibits the take of anchovy and sardine within relatively small areas around four African penguin breeding colonies, two in the Benguela upwelling ecosystem and two in the adjacent Agulhas region. For the Benguela, fisheries closures within the birds’ primary foraging range increased their breeding productivity and perhaps reduced parental foraging efforts, indicating that the fisheries are competing with the birds for food. Results were less clear for foraging behaviour in the Agulhas, but no data on breeding success were collected there. The African penguin is endangered, its population continues to decline, and fisheries closures have been demonstrated to improve demographic traits that contribute to population growth. Therefore, given the critical status of the species, fisheries closures should be maintained, at least at Dassen Island where the population has great capacity to expand and support other nearby colonies. Continuing or implementing corresponding fisheries closures in the Agulhas region is also warranted, as well as creating and testing the value of pelagic closed areas during the non-breeding season when the penguins disperse widely across these ecosystems. These management actions would increase penguin food supplies and may help to meet societal goals of halting the decline of the penguin population, as well as maintaining the economic and cultural services provided by fisheries and ecotourism.

Agulhas, Benguela, Dassen Island↗
USGS2023

Source contributions to suspended sediment and particulate selenium export from the Loutsenhizer Arroyo and Sunflower Drain watersheds in Colorado

Selenium in aquatic ecosystems of the lower Gunnison River Basin in Colorado is affecting the recovery of populations of endangered, native fish species. Dietary exposure is the primary pathway for bioaccumulation of selenium in fish, and particulate selenium can be consumed directly by fish or by the invertebrates on which fish feed. Although selenium can be incorporated into particulate matter via biogeochemical processes, particulate selenium can also enter aquatic ecosystems of the lower Gunnison River Basin from sediments derived from the selenium-rich Mancos Shale. The U.S. Geological Survey, in cooperation with the Colorado Water Conservation Board, conducted this study during 2018–19 to identify sources of selenium-rich suspended sediments from two watersheds underlain by Mancos Shale: Loutsenhizer Arroyo and Sunflower Drain, which is a locally known agricultural drainage near the municipality of Delta, Colorado. A multipronged approach (fieldwork, laboratory work, and computer modeling) referred to as “sediment fingerprinting” was used to evaluate sources of suspended sediments in the streams flowing out of the two studied watersheds. Four potential source types for suspended sediments were identified and sampled (using soil plugs) within the watersheds: rangelands, agricultural fields, arroyo walls, and streambanks. The sediment fingerprinting approach used elemental concentrations and naturally occurring fallout radionuclides as tracers to apportion percent contributions from the four source types of suspended sediments found in streamflow from both watersheds. To determine the dominant sources of suspended sediment in streamflow from both watersheds, a mathematical “unmixing” model was used. Unmixing models apportion source percentages to samples of material in which those sources are mixed. These models used elemental and isotopic data in the suspended sediments to unmix them into proportional contributions from source types. The results indicated that arroyo walls and streambanks generally dominated as sources of the suspended sediment. Arroyo walls and streambanks were channel-adjacent sources, with sediments mobilized by water flowing within the stream channel. These sources accounted for greater than 50 percent of suspended sediment in all but one sample and accounted for 100 percent of suspended sediment in 5 of the 11 samples collected. Rangeland and agricultural field sources were located in uplands outside of stream channels and were detected more often during the non-irrigation season. Rangeland and agricultural field sources each were found in 5 of the 11 samples collected. Concentrations of selenium in sediment-source samples were comparatively greater in streambanks and lower in rangelands, with agricultural fields and arroyo walls being intermediate. As a result, source apportionments for particulate selenium skewed towards sources adjacent to stream channels more than for suspended sediments. Water imports for irrigation have changed the hydrology of the watersheds, and a notable fraction of imported water passes through the watersheds rapidly. The rapid flowthrough water during the irrigation season likely contributes heavily to sediment erosion and transport in Loutsenhizer Arroyo and Sunflower Drain, particularly from channel-adjacent sources of sediment. Decreases in irrigation season streamflow, at least in Loutsenhizer Arroyo, may have decreased sediment erosion and transport during the 2018–20 irrigation seasons compared to the 2015–17 seasons.

Colorado↗
USGS2009

Surface-Water and Groundwater Interactions along the Withlacoochee River, West-Central Florida

A study of the Withlacoochee River watershed in west-central Florida was conducted from October 2003 to March 2007 to gain a better understanding of the hydrology and surface-water and groundwater interactions along the river. The Withlacoochee River originates in the Green Swamp area in north-central Polk County and flows northerly through seven counties, emptying into the Gulf of Mexico. This study includes only the part of the watershed located between the headwaters in the Green Swamp and the U.S. Geological Survey gaging station near Holder, Florida. The Withlacoochee River within the study area is about 108 miles long and drains about 1,820 square miles. The Withlacoochee River watershed is underlain by thick sequences of carbonate rock that are covered by thin surficial deposits of unconsolidated sand and sandy clay. The clay layer is breached in many places because of the karst nature of the underlying limestone, and the degree of confinement between the Upper Florida aquifer and the surficial aquifer is highly variable throughout the watershed. The potential for movement of water from the surface or shallow deposits to deeper deposits, or from deeper deposits to the shallow deposits, exists throughout the Withlacoochee River watershed. Water levels were higher in deeper Upper Floridan aquifer wells than in shallow Upper Floridan aquifer wells or surficial aquifer wells at 11 of 19 paired or nested well sites, indicating potential for discharge to the surface-water system. Water levels were higher in shallow Upper Floridan aquifer or surficial aquifer wells than in deeper Upper Floridan aquifer wells at five other sites, indicating potential for recharge to the deeper Upper Floridan aquifer. Water levels in the surficial aquifer and Upper Floridan aquifer wells at the remaining three sites were virtually the same, indicating little or no confinement at the sites. Potentiometric-surface maps of the Upper Floridan aquifer indicate the pattern of groundwater flow in the aquifer did not vary greatly from season to season during the study. Potentiometric contours indicate groundwater discharge to the river in the vicinity of Dade City and Lake Panasoffkee. During dry periods, groundwater from the underlying Upper Floridan aquifer contributed to the flow in the river. During wet periods, streamflow had additional contributions from runoff and input from tributaries. Groundwater has a greater effect on streamflow downstream from the Dade City station than upstream from the Dade City station because confinement between surficial deposits and the Upper Floridan aquifer is greater in the Green Swamp area than in downstream areas. Estimates of streamflow gains and losses were made along the Withlacoochee River during base-flow conditions in May 2004, April 2005, and April 2006. Base flow was higher in April 2005 than in May 2004 and April 2006. Consistent net seepage gains were identified in 16 of 20 subreaches analyzed during all seepage runs. The direction of exchange was variable in the remaining four subreaches. Low specific conductance, pH, and calcium concentrations in water from the Withlacoochee River near the headwater area indicated a surface-water system not directly connected to the Upper Floridan aquifer. Downstream from the Dade City station, higher specific conductance, pH, and calcium concentrations in the river water indicated an increasing influence of groundwater, and were similar to groundwater during low-flow conditions. Strontium isotope ratios indicate groundwater originates from shallow parts of the Upper Floridan aquifer in the upper reaches of the river, and from increasingly deeper parts of the aquifer in the downstream direction. Mean annual base-flow estimates also indicate increasing groundwater discharge to the river in the downstream direction. Mean annual base flow estimated using standard hydrograph separation method assumptions ranged from about 4.7 to 5.1 inches per year

Scientific Investigations Report↗
USGS2010

Intra-seasonal variation in foraging behavior among Adélie penguins (Pygocelis adeliae) breeding at Cape Hallett, Ross Sea, Antarctica

We investigated intra-seasonal variation in foraging behavior of chick-rearing Adélie penguins, Pygoscelis adeliae , during two consecutive summers at Cape Hallett, northwestern Ross Sea. Although foraging behavior of this species has been extensively studied throughout the broad continental shelf region of the Ross Sea, this is the first study to report foraging behaviors and habitat affiliations among birds occupying continental slope waters. Continental slope habitat supports the greatest abundances of this species throughout its range, but we lack information about how intra-specific competition for prey might affect foraging and at-sea distribution and how these attributes compare with previous Ross Sea studies. Foraging trips increased in both distance and duration as breeding advanced from guard to crèche stage, but foraging dive depth, dive rates, and vertical dive distances travelled per hour decreased. Consistent with previous studies within slope habitats elsewhere in Antarctic waters, Antarctic krill ( Euphausia superba ) dominated chick meal composition, but fish increased four-fold from guard to crèche stages. Foraging-, focal-, and core areas all doubled during the crèche stage as individuals shifted distribution in a southeasterly direction away from the coast while simultaneously becoming more widely dispersed (i.e., less spatial overlap among individuals). Intra-specific competition for prey among Adélie penguins appears to influence foraging behavior of this species, even in food webs dominated by Antarctic krill.

Polar Biology↗
USGS2008

Nitrogen immobilization by wood-chip application: Protecting water quality in a northern hardwood forest

Forest harvesting disrupts the nitrogen cycle, which may affect stream water quality by increasing nitrate concentrations, reducing pH and acid neutralizing capacity, and mobilizing aluminum and base cations. We tested the application of wood chips derived from logging slash to increase immobilization of N after harvesting, which should reduce nitrate flux to streams. In August 2004, a stand of northern hardwoods was patch-clearcut in the Catskill Mountains, NY, and four replicates of three treatments were implemented in five 0.2-ha cut patches. Wood chips were applied to the soil surface at a rate equivalent to the amount of slash smaller than eight inches in diameter (1?? treatment). A second treatment doubled that rate (2??), and a third treatment received no chips (0??). Additionally, three uncut reference plots were established in nearby forested areas. Ion exchange resin bags and soil KCl-extractions were used to monitor nitrate availability in the upper 5-10 cm of soil approximately every seven weeks, except in winter. Resin bags indicated that the wood chips retained 30% or 42% of the nitrate pulse, while for KCl extracts, the retention rate was 78% or 100% of the difference between 0?? and uncut plots. During the fall following harvest, wood-chip treated plots had resin bag soil nitrate concentrations about 25% of those in 0?? plots (p = 0.0001). In the first growing season after the cut, nitrate concentrations in wood-chip treated plots for KCl extracts were 13% of those in 0?? treatments (p = 0.03) in May and about half those in 0?? treatments (p = 0.01) in July for resin bags. During spring snowmelt, however, nitrate concentrations were high and indistinguishable among treatments, including the uncut reference plots for resin bags and below detection limit for KCl extracts. Wood chips incubated in litterbags had an initial C:N of 125:1, which then decreased to 70:1 after one year of field incubation. These changes in C:N values indicate that the wood-chip application can potentially immobilize between 19 and 38 kg N ha-1 in the first year after harvesting, depending on the rate of wood-chip application. Our results suggest that the application of wood chips following harvesting operations can contribute to the protection of water quality and warrant additional research as a new Best Management Practice following cutting in regions that receive elevated levels of atmospheric N deposition. ?? 2008 Elsevier B.V. All rights reserved.

Forest Ecology and Management↗
USGS2024

Dissolved arsenic concentrations in surface waters within the upper portions of the Klamath River Basin, Oregon and California

Arsenic toxicity is an environmental health problem. Levels of arsenic in surface waters at some locations in the Klamath River Basin in southern Oregon and northern California can exceed the U.S. Environmental Protection Agency (EPA) standard for drinking water. There are both anthropogenic and natural sources of arsenic. The Klamath River Basin consists primarily of volcanic deposits and contains an underground geothermal system with hot springs and warm water wells, all known natural sources of arsenic. Anthropogenic sources of arsenic are related to the agricultural use of herbicides, fungicides, and insecticides. Surface water arsenic levels can also be affected by fertilizer amendments, evaporative concentration, oxygen-level depletion, and various geochemical transformations that can increase arsenic mobilization. In this study by the U.S. Geological Survey and the Bureau of Reclamation, dissolved concentrations of arsenic, copper, and lead were measured in surface waters at 39 unique sites within the upper portions of the Klamath River Basin between 2018 and 2022. In every year, except 2022, sites were sampled four times between April and November. Surface-water arsenic concentrations varied up to four-orders of magnitude among sites. Median arsenic concentration was lowest at Cherry Creek (0.03 micrograms per liter [μg/L]) and highest at Wood Kimball Spring (36.7 μg/L), two sites located north of Upper Klamath Lake. The highest arsenic concentrations (17.4±4.9 μg/L, n =3) were found in drain sites (defined here as a waterbody returning used irrigation water) while the lowest arsenic concentrations were found in an artesian well (0.8 μg/L, n =1). The elevated arsenic concentrations of the drain sites suggest that arsenic might be concentrated or mobilized by agricultural activities, water re-use practices, and (or) by geochemical processes occurring around water stored in drains (that is, in the water column and across sediment water boundaries). A source of arsenic in drain water in the Klamath Strait Drain area includes water used for irrigation originating from Ady Canal. Other potential sources include groundwater, geothermal water, and local soils and sediments. Seasonal differences in surface-water arsenic concentrations were detected at 13 sites, 10 of which had higher arsenic concentrations in summer than in either spring or fall. The sites sampled around Upper Klamath Lake, the impounded rivers, one of the two canal sites, and 5 of the 14 river sites had higher surface-water arsenic concentrations in the summer than in either spring or fall. Surface-water arsenic concentrations from groundwater sources (that is, springs and in the artesian well) did not vary significantly among seasons (p-values greater than 0.1). Median surface-water concentrations of copper and lead ranged from 0.03 to 3.7 μg/L, and from 0.013 to 0.175 μg/L ( n =2–18), respectively. Dissolved concentrations of both metals were below acute toxicity endpoints reported by the EPA for freshwater animals. Surface-water arsenic concentrations varied independently from corresponding changes in surface-water lead or copper concentrations. However, arsenic concentrations measured in bed-sediment samples collected from a subset of sites located north of Upper Klamath Lake correlated strongly and significantly with the corresponding sedimentary lead concentrations ( p =0.015). Aqueous arsenic speciation measured in a subset of sites in 2019 and 2022 showed that all the arsenic existed as arsenic (V), the most oxidized arsenic species, and presumably, the least toxic. The highest proportions of arsenite (As(III)), the presumably most toxic arsenic species, relative to total arsenic concentrations were found at drain sites. Our assessment of dissolved arsenic concentrations in various surface-water bodies in the Upper Klamath River Basin reveals geographical areas of consistently low (below 2.1 μg/L), moderate (below 10 μg/L) and high (above 10 μg/L) surface-water arsenic concentrations. South of Upper Klamath Lake, surface-water arsenic concentrations were consistently higher than 20 μg/L at two drain sites located in an area of predominant agricultural land use with extensive water re-use practices. North of Upper Klamath Lake, surface-water arsenic concentrations greater than 20 μg/L were consistently measured at sites with limited nearby agricultural activities, suggesting a geogenic source. The consistently high arsenic levels from the Wood River at Jackson F. Kimball State Park, Fort Creek, and Crooked Creek, which are sites located at or near headwater spring sources, suggest a natural background source of arsenic. Water flowing downstream from this area could be a potential source of arsenic to Upper Klamath Lake and the Upper Klamath River.

California, Oregon↗
USGS2013

Spatio-temporal dynamics of pneumonia in bighorn sheep

Bighorn sheep mortality related to pneumonia is a primary factor limiting population recovery across western North America, but management has been constrained by an incomplete understanding of the disease. We analysed patterns of pneumonia-caused mortality over 14 years in 16 interconnected bighorn sheep populations to gain insights into underlying disease processes. 2. We observed four age-structured classes of annual pneumonia mortality patterns: all-age, lamb-only, secondary all-age and adult-only. Although there was considerable variability within classes, overall they differed in persistence within and impact on populations. Years with pneumonia-induced mortality occurring simultaneously across age classes (i.e. all-age) appeared to be a consequence of pathogen invasion into a naïve population and resulted in immediate population declines. Subsequently, low recruitment due to frequent high mortality outbreaks in lambs, probably due to association with chronically infected ewes, posed a significant obstacle to population recovery. Secondary all-age events occurred in previously exposed populations when outbreaks in lambs were followed by lower rates of pneumonia-induced mortality in adults. Infrequent pneumonia events restricted to adults were usually of short duration with low mortality. 3. Acute pneumonia-induced mortality in adults was concentrated in fall and early winter around the breeding season when rams are more mobile and the sexes commingle. In contrast, mortality restricted to lambs peaked in summer when ewes and lambs were concentrated in nursery groups. 4. We detected weak synchrony in adult pneumonia between adjacent populations, but found no evidence for landscape-scale extrinsic variables as drivers of disease. 5. We demonstrate that there was a >60% probability of a disease event each year following pneumonia invasion into bighorn sheep populations. Healthy years also occurred periodically, and understanding the factors driving these apparent fade-out events may be the key to managing this disease. Our data and modelling indicate that pneumonia can have greater impacts on bighorn sheep populations than previously reported, and we present hypotheses about processes involved for testing in future investigations and management.

Journal of Animal Ecology↗
USGS2021

General water-quality conditions, long-term trends, and network analysis at selected sites within the Ambient Water-Quality Monitoring Network in Missouri, water years 1993–2017

The U.S. Geological Survey, in cooperation with the Missouri Department of Natural Resources, collects data pertaining to the surface-water resources of Missouri. Established in 1964, the Ambient Water-Quality Monitoring Network (AWQMN) consisted of 69 sites in 2017. Two additional sites from the National Water-Quality Program are included with the AWQMN sites for the analyses in this report. The sites are sampled typically from 2 to 12 times per year for physical properties, total suspended solids, nutrients, fecal indicator bacteria, and trace elements. The period of analysis for this study was from 1993 through 2017 and data analysis included 71 sites and 15 water-quality constituents plus discharge. Data analysis involved retrieving the data, conditioning the data for analysis, analyzing the data for trends, and analyzing the monitoring network to determine if potential data gaps or data redundancies exist in the network. Results from these analyses can be used to help manage the monitoring network into the future. Water-quality data were analyzed using several software packages to provide graphical and statistical information for interpretation of trends in the data at selected sites. Discharge data at selected sites were analyzed to determine the general trends during the analysis period and how the water-quality samples represented the range of daily mean discharges at each site. Water-quality data also were analyzed at selected sites to determine the relative sensitivity of selected sites and constituents to changes in data collection frequency. Trend analysis at selected sites using a simulated reduction in sampling frequency was completed to compare to trends obtained using monthly data to determine the potential degradation in the ability of determining trends from a reduced sampling frequency. The viability of using estimated discharge to evaluate long-term trends for sites with no continuous discharge was investigated. Data from sites were statistically compared in groups to determine the relative similarity (or difference) between sites for each water-quality constituent to identify potentially redundant sites in the monitoring network. Discharge-weighted long-term trends during 1993 through 2017 were analyzed for 15 water-quality constituents at 58 sites and results indicated there were significant single- or two-period trends in about 17 percent of the analyses. Some trends indicated improvement and some trends indicated deterioration of the general water quality at some sites in the AWQMN. No trend was indicated in about 31 percent of the analyses. The constituents pH, specific conductance, and total phosphorus showed the most frequent significant trends, and each of the 15 constituents examined had a significant trend at one or more sites. A total of 42 sites indicated at least 1 constituent with a significant single- or two-period trend, and 10 sites indicated 6 or more significant trends. Potential data gaps identified for computing discharge-weighted long-term trends in the monitoring network included the lack of collection of continuous discharge at 23 sites, insufficient sampling frequency for some constituents (dissolved chloride and total and dissolved lead and zinc) at some sites, insufficient temporal sample distribution (lack of at least one sample in each season per year) at some sites, and insufficient sampling frequency for some highly censored constituents (nutrients and total and dissolved lead and zinc) at some sites. Potential data gaps based on site spatial distribution were identified in 7 basins greater than 800 square miles. Potential site redundancies were identified in 4 basins that had an area greater than 500 square miles with a site density greater than 2 sites per 1,000 square miles. Potential site redundancies also were identified for nine site pairs by observing statistical similarities in the constituent data distributions. Sampling frequency was investigated to determine if reducing the sampling frequency of select constituents could provide a statistically similar data distribution. At 28 of 71 sites, 11 constituents had sufficient data collection frequency (approximately monthly) to allow for the creation of simulated datasets of various reduced data collection frequency. For the selected monitoring network sites analyzed, the data distribution of a simulated sampling frequency of four times per year or greater, roughly evenly distributed over the year, was not significantly different than the data distribution of the original monthly sampling frequency. Sites analyzed using varying simulated sampling frequencies tended to be more sensitive to sampling frequency changes if they were in basins classified as large or very large size and tended to be least sensitive in basins classified as small and medium size in the Ozark Plateaus Province. Simulated reduced frequency sampling analysis indicated that the constituents and measurements most sensitive to changes in sampling frequencies were water temperature, dissolved oxygen, discharge, and dissolved nitrate, and least sensitive were pH, total suspended solids, dissolved phosphorus, and total phosphorus. Discharge-weighted long-term trend analysis was repeated at 22 sites for 11 constituents using a simulated quarterly sampling frequency, and matched about 46 percent of the significant single-period trends identified using monthly data and about 65 percent of the analyses that indicated no trend using the monthly data.

Missouri↗
USGS1975

Evaluation of reservoir sites in North Carolina: Regional relations for estimating the reservoir capacity needed for a dependable water supply

Draft-storage-frequency relations, which show the storage required for a reservoir to furnish a specified withdrawal or draft are regionalized for four zones in the State, using the mean annual flow of the streams as an index. The differences between the zones primarily reflect differences in the variability of stream flow. To assure the available draft will fall below 75 percent of the mean annual flow of a stream only once in 50 years on the average, a reservoir in the mountains would need a usable storage capacity of 45 percent of the mean annual runoff of the impounded stream. In comparison, reservoirs in parts of the Piedmont furnishing a draft of 75 percent of the mean annual flow must have usable storage equal to 60 percent of the mean annual runoff of the stream. In the inner Coastal Plain the storage required increases to 84 per-cent, and in the outer Coastal Plain to about 110 percent. These increases in storage necessary to furnish a certain draft are indicative of the general increase in streamflow variability, both seasonally and between years, that occurs from west to east in the State. Net evaporative draft, the evaporative loss from reservoirs when annual evaporation exceeds annual precipitation, also varies from west to east. For instance, a reservoir impounding a Piedmont stream, and designed with a 5 percent chance of deficiency, will have a net evaporative draft about twice as large as a similar sized reservoir in the Coastal Plain. In the mountains, annual precipitation always exceeds evaporation because of the cooler temperatures and higher rates of precipitation. Annual net evaporation is also proportionately smaller for large reser voirs than for small ones. On a Coastal Plain reservoir, with storage equivalent to the mean annual runoff of the stream and being drafted at 90 percent of the mean annual flow, the net evaporation for a stream with a mean annual runoff of only 500 acre-feet (0.62 cubic hectometres) is three times as great as for a stream with mean annual runoff of 100,000 acre-feet (123 cubic hectometres). Thus, one large reservoir has less evaporation loss than several small ones capable of furnishing, collectively, the same reliable draft. Under some circumstances, sedimentation can quickly reduce the available storage in a reservoir, thus decreasing the reliable draft. Estimated sedi-mentation rates in the Piedmont can range from 240 acre-feet per year (0.3 cubic hectometres per year) in a severely exposed drainage basin of 10 square miles (26 square kilometres) to 0.4 acre-feet per year (493 cubic metres per year) in a wooded basin of the same size. Seepage beneath and around a reservoir dam is normally not significant in the State. The usual engineering practices should be followed, however, to avoid locating the dam on an open or active fault, cavernous limestone, or continuous beds of sand or gravel.

North Carolina↗
USGS2021

Factors affecting nest success of colonial nesting waterbirds in southwest Louisiana

Subsidence and accelerated sea level rise impact nesting area availability and flood probabilities of breeding islands for colonial nesting waterbirds. In 2017 and 2018, we monitored 855 nests of four species of colonial nesting waterbirds on Rabbit Island, LA, to determine factors affecting nest and chick success. Based on logistic exposure models of nests, tricolored herons had the greatest likelihood of survival to hatch (mean (95% confidence interval)) (77% (65.9–83.1%)), followed by brown pelicans (70% (59.9–98.5%)), roseate spoonbills (70% (38.9–83.8%)), and Forster’s terns (12% (10.7–12.2%)). Likelihood of survival to fledge was highest for tricolored herons (32% (12.8–40.7%)), followed by brown pelicans (28% (19.5–28.6%)), roseate spoonbills (47% (43.7–53.3%)), and Forster’s terns (0% (0.005–0.01%)). Nesting strategy and nest timing impacted survival rate; however, the effect depended on timing of inundation events as the timing of inundation events varied across years. Flooding was the primary cause of nest failure for most species. In 2003–2012, rapid expansion in brown pelican colony numbers and significant chick production occurred at Rabbit Island, but hydrologic records indicate no island inundation occurred during the breeding season from the beginning of the hydrologic record (2006) through 2011. Thus, our results contrast with those of previous studies conducted under different hydrologic conditions and demonstrate the challenges of short-term studies informing coastal restoration in a system that is influenced by multi-year to multi-decadal climatic cycles.

Louisiana↗
USGS2015

U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative—2014 annual report

This is the seventh report produced by the U.S. Geological Survey (USGS) for the Wyoming Landscape Conservation Initiative (WLCI) to detail annual activities conducted by the USGS for addressing specific management needs identified by WLCI partners. In FY2014, there were 26 projects, including a new one that was completed, two others that were also completed, and several that entered new phases or directions. The 26 projects fall into several categories: (1) synthesizing and analyzing existing data to identify current conditions on the landscape and using the data to develop models for projecting past and future landscape conditions; (2) monitoring indicators of ecosystem conditions and the effectiveness of on-the-ground habitat projects; (3) conducting research to elucidate the mechanisms underlying wildlife and habitat responses to changing land uses; (4) managing and making accessible the large number of databases, maps, and other products being developed; and (5) coordinating efforts among WLCI partners, helping them use USGS-developed decision-support tools, and integrating WLCI outcomes with future habitat enhancement and research projects. The new (completed) project was the development and publication of a public outreach piece for visitors of Fossil Butte National Monument. The final product was a USGS Fact Sheet that capitalized on previously collected elk-monitoring data to interpret the ecology of the Monument’s elk population and the importance of the Monument’s habitats to this highly visible wildlife species. One of the completed projects entailed developing and evaluating a synthetic approach to high-resolution satellite imagery for use in effectiveness monitoring, which culminated in a journal article. The other completed project was a coalescing of two similar tasks under data and information management that pertain to Web application development and the development of outreach and graphic products into a single integrated project that focuses on developing and maintaining/upgrading Web applications and other tools for visualizing, mapping, and using geospatial data. Major accomplishments for FY2014 included several publications, including Part B of an energy resources map that (with Part A) depicts coal, wind, oil, gas, oil shale, uranium, and solar energy production in the WLCI region. Two published works associated with sage-grouse included a Wildlife Monograph on prioritizing species’ habitats across large landscapes, multiple seasons, and novel areas (using sage-grouse in Wyoming as an example), and a USGS Data Series report that includes both the data used in the habitat-prioritization models and the habitat prioritization models developed for sage-grouse. Our Science Team also published a framework for conducting large, collaborative projects that rely on geospatial data, and a paper that describes the efficacy of fusing satellite data collected at various resolutions for measuring and monitoring vegetation changes. These products are all invaluable tools for maximizing the efficiency and effectiveness of managing species of concern, conducting future landscape-scale assessments, and monitoring status and trends of landscape conditions. Other highlights of FY2014 included a renewed effort to gather and analyze wildlife and habitat status and trend data for the WLCI Interagency Monitoring Database (IAMD) to assess long-term trends and cumulative effects associated with land-use and climate changes. Water-monitoring efforts included drilling four new groundwater-monitoring wells in the Green and New Fork River basins near the proposed Normally Pressured Lance Formation energy development, and continued data collection at established water-monitoring sites. Three additional wells were sampled as part of the Wyoming Groundwater Monitoring Network, bringing the total to 19 Network wells sampled in the WLCI region since 2010. Combined, these water-monitoring efforts can help to identify potential changes in water quality or levels that may result from land-use changes. Major terrestrial monitoring accomplishments included processing satellite imagery from 1985−2010 to develop a historical perspective of long-term vegetation changes, which can serve as a basis for monitoring current and future trends in sagebrush steppe. Such data are crucial tools for agencies tasked with sage-grouse management and conservation. The USGS WLCI Science Team also continued monitoring and testing methods for evaluating WLCI habitat treatments designed to promote aspen regeneration and enhance sage-grouse habitat, and to assess how those treatments influence invasive species distributions and ungulate herbivory. Highlights included analyzing field data collected to elucidate the relationships between sage-grouse habitat use and the proximity of energy infrastructure, and using new instruments to measure productivity responses of aspen woodlands to various factors. Numerous FY2014 accomplishments specifically addressed agency needs to manage and conserve Wyoming’s wildlife species of concern. A pygmy rabbit habitat model and Wyoming distribution map were completed to identify factors associated with rabbit habitat occupancy. Previous work on sage-grouse population dynamics was expanded to better understand the factors that drive long-term viability of sage-grouse populations and to develop a tool that helps to identify key factors limiting sage-grouse persistence in Wyoming. Field work and data analyses continued for elucidating the relationships between sagebrush songbird abundance and productivity, the intensity of energy development, and community dynamics of nest predators. For the mule deer study, mixed mountain shrublands important to migrating and wintering mule deer were mapped and delivered to WLCI partners. Additionally, the relationships between energy development and crucial winter habitat for mule deer were evaluated, and a new phase of work was implemented to better understand relationships between plant phenology and mule deer migration movements. Finally, initial analyses of data collected to evaluate fish-community composition in relation to habitat quality indicate that water quality, as measured by concentrations of hydrocarbons, water temperature, and others parameters, has been diminished in subwatersheds with higher levels of energy development. Overall, the outcomes and products of these wildlife studies contribute significantly to the information and tools needed for addressing effects of land-use changes on Wyoming’s species of concern. Finally, capabilities of the WLCI Web site and the USGS ScienceBase infrastructure were maintained and upgraded to help ensure access to and efficient use of all the WLCI data, products, assessment tools, and outreach materials that have been developed. Of particular note is the completion of three Web applications developed for mapping (1) the 1900−2008 progression of oil and gas development;(2) the predicted distributions of Wyoming’s Species of Greatest Conservation Need; and (3) the locations of coal and wind energy production, sage-grouse distribution and core management areas, and alternative routes for transmission lines within the WLCI region. Collectively, these applications tools provide WLCI planners and managers with powerful tools for better understanding the distributions of wildlife species and potential alternatives for energy development.

Wyoming↗
USGS2018

Estimation of stream conditions in tributaries of the Klamath River, northern California

Because of their critical ecological role, stream temperature and discharge are requisite inputs for models of salmonid population dynamics. Coho Salmon inhabiting the Klamath Basin spend much of their freshwater life cycle inhabiting tributaries, but environmental data are often absent or only seasonally available at these locations. To address this information gap, we constructed daily averaged water temperature models that used simulated meteorological data to estimate daily tributary temperatures, and we used flow differentials recorded on the mainstem Klamath River to estimate daily tributary discharge. Observed temperature data were available for fourteen of the major salmon bearing tributaries, which enabled estimation of tributary-specific model parameters at those locations. Water temperature data from six mid-Klamath Basin tributaries were used to estimate a global set of parameters for predicting water temperatures in the remaining tributaries. The resulting parameter sets were used to simulate water temperatures for each of 75 tributaries from 1980-2015. Goodness-of-fit statistics computed from a cross-validation analysis demonstrated a high precision of the tributary-specific models in predicting temperature in unobserved years and of the global model in predicting temperatures in unobserved streams. Klamath River discharge has been monitored by four gages that broadly intersperse the 292 kilometers from the Iron Gate Dam to the Klamath River mouth. These gages defined the upstream and downstream margins of three reaches. Daily discharge of tributaries within a reach was estimated from 1980-2015 based on drainage-area proportionate allocations of the discharge differential between the upstream and downstream margin. Comparisons with measured discharge on Indian Creek, a moderate-sized tributary with naturally regulated flows, revealed that the estimates effectively approximated both the variability and magnitude of discharge.

California↗
USGS2012

An environmental streamflow assessment for the Santiam River basin, Oregon

The Santiam River is a tributary of the Willamette River in northwestern Oregon and drains an area of 1,810 square miles. The U.S. Army Corps of Engineers (USACE) operates four dams in the basin, which are used primarily for flood control, hydropower production, recreation, and water-quality improvement. The Detroit and Big Cliff Dams were constructed in 1953 on the North Santiam River. The Green Peter and Foster Dams were completed in 1967 on the South Santiam River. The impacts of the structures have included a decrease in the frequency and magnitude of floods and an increase in low flows. For three North Santiam River reaches, the median of annual 1-day maximum streamflows decreased 42–50 percent because of regulated streamflow conditions. Likewise, for three reaches in the South Santiam River basin, the median of annual 1-day maximum streamflows decreased 39–52 percent because of regulation. In contrast to their effect on high flows, the dams increased low flows. The median of annual 7-day minimum flows in six of the seven study reaches increased under regulated streamflow conditions between 60 and 334 percent. On a seasonal basis, median monthly streamflows decreased from February to May and increased from September to January in all the reaches. However, the magnitude of these impacts usually decreased farther downstream from dams because of cumulative inflow from unregulated tributaries and groundwater entering the North, South, and main-stem Santiam Rivers below the dams. A Wilcox rank-sum test of monthly precipitation data from Salem, Oregon, and Waterloo, Oregon, found no significant difference between the pre-and post-dam periods, which suggests that the construction and operation of the dams since the 1950s and 1960s are a primary cause of alterations to the Santiam River basin streamflow regime. In addition to the streamflow analysis, this report provides a geomorphic characterization of the Santiam River basin and the associated conceptual framework for assessing possible geomorphic and ecological changes in response to river-flow modifications. Suggestions for future biomonitoring and investigations are also provided. This study was one in a series of similar tributary streamflow and geomorphic studies conducted for the Willamette Sustainable Rivers Project. The Sustainable Rivers Project is a national effort by the USACE and The Nature Conservancy to develop environmental flow requirements in regulated river systems.

Oregon↗
USGS2001

Flow and habitat effects on juvenile fish abundance in natural and altered flow regimes

Conserving biological resources native to large river systems increasingly depends on how flow-regulated segments of these rivers are managed. Improving management will require a better understanding of linkages between river biota and temporal variability of flow and instream habitat. However, few studies have quantified responses of native fish populations to multiyear (>2 yr) patterns of hydrologic or habitat variability in flow-regulated systems. To provide these data, we quantified young-of-year (YOY) fish abundance during four years in relation to hydrologic and habitat variability in two segments of the Tallapoosa River in the southeastern United States. One segment had an unregulated flow regime, whereas the other was flow-regulated by a peak-load generating hydropower dam. We sampled fishes annually and explored how continuously recorded flow data and physical habitat simulation models (PHABSIM) for spring (April-June) and summer (July-August) preceding each sample explained fish abundances. Patterns of YOY abundance in relation to habitat availability (median area) and habitat persistence (longest period with habitat area continuously above the long-term median area) differed between unregulated and flow-regulated sites. At the unregulated site, YOY abundances were most frequently correlated with availability of shallow-slow habitat in summer (10 species) and persistence of shallow-slow and shallow-fast habitat in spring (nine species). Additionally, abundances were negatively correlated with 1-h maximum flow in summer (five species). At the flow-regulated site, YOY abundances were more frequently correlated with persistence of shallow-water habitats (four species in spring; six species in summer) than with habitat availability or magnitude of flow extremes. The associations of YOY with habitat persistence at the flow-regulated site corresponded to the effects of flow regulation on habitat patterns. Flow regulation reduced median flows during spring and summer, which resulted in median availability of shallow-water habitats comparable to the unregulated site. However, habitat persistence was severely reduced by flow fluctuations resulting from pulsed water releases for peak-load power generation. Habitat persistence, comparable to levels in the unregulated site, only occurred during summer when low rainfall or other factors occasionally curtailed power generation. As a consequence, summer-spawning species numerically dominated the fish assemblage at the flow-regulated site; five of six spring-spawning species occurring at both study sites were significantly less abundant at the flow-regulated site. Persistence of native fishes in flow-regulated systems depends, in part, on the seasonal occurrence of stable habitat conditions that facilitate reproduction and YOY survival.

Alabama, Georgia↗
USGS2008

Predicted effects of proposed new regulation plans on sedge/grass meadows of Lake Ontario

Previously described models for predicting the percent of Lake Ontario wetlands that would be occupied by sedge/grass-dominated meadow marsh were used to test four proposed new plans for regulation of lake levels and to make comparisons with the current plan and unregulated conditions. The models for drowned river mouth, barrier beach, open embayment, and protected embayment wetlands assessed responses to lake levels that would be generated by each plan under net total supplies modified from those that occurred from1900 to 2000. In years when reduced supplies would allow meadow marsh regeneration, simulated unregulated lake levels produced the most meadow marsh in all wetland geomorphic types; current Plan 1958DD produced the least. Overall predicted percent meadow marsh under the test plans decreased in the order B+, 2007, D+, and A+, and the latter three plans produced rather similar results in many cases. Lower percentages of meadow marsh under some plans were due to insufficient low lake levels that could allow soils to dry and restrict invasion by cattails, as well as lack of periodic high lake levels that could kill invading upland plants. An assessment of seasonal lake-level characteristics demonstrated that Plan 2007 would reduce mean winter lake levels by 13 cm or more than Plan B+ and springtime lake levels by more than 10 cm. These seasonal differences could result in less winter habitat for muskrats and reduced access to spring spawning habitats for fish such as northern pike. Our model results provide important information for use in the process of selecting a new regulation plan for Lake Ontario.

Journal of Great Lakes Research↗
USGS1989

Effects of agriculture on quality of water in surficial sand-plain aquifers in Douglas, Kandiyohi, Pope, and Stearns counties, Minnesota

The 245 water samples collected from 56 wells at 45 sites in surficial sand-plain aquifers that underlie 600 square miles of Douglas, Kandiyohi, Pope, and Stearns Counties in west-central Minnesota contained wide ranges in concentrations of some constituents--sulfate 2 to 160 mg/L (milligrams per liter), chloride 1.6 to 64 mg/L, nitrite plus nitrate nitrogen < (less than) 0.1 to 72 mg/L, ammonia <0.01 to 3.3 mg/L , iron <0.003 to 8.6 mg/L, and managanese <0.001 to 1.5 mg/L . Substantial fluctuations in these constituents over time were observed. Nitrate concentrations exceeded the Minnesota drinking-water standard of 10 mg/L (as N) in 50 percent of the wells sampled. Differences in concentrations of nitrate with depth below the water table were observed at 11 paired-well sites where one well was screened near the water table and another well was screened 10 or more feet below the water table. Similar differences in concentration with depth were observed in specific conductance, iron, chloride, and sulfate, but not as consistently. At eight sites, nitrate concentrations were higher at the water table (4.3 to 72 mg/L) than deeper in the aquifer (<0.1 to 27 mg/L). At the other three sites, nitrate concentrations were greater at depth than at the water table, although the contrast in concentrations was not as large. Increased concentration at depth is attributed to vertical mixing at the three sites, possibly caused by rapid infiltration of more dilute water from ephemeral ponds following storms. The more dilute water displaces the high-nitrate water to greater depth. Nitrate concentrations fluctuated seasonally in response to the combined effects of precipitation and agricultural practices (irrigation and fertilization). Nitrite plus nitrate nitrogen concentrations in one Stearns County well fluctuated from 35 mg/L in August 1982, to 72 mg/L in May 1983, to 18 mg/L in May 1984. In 12 wells for which historical data were available, the mean nitrate concentration during this study (1982-84) was greater than the mean concentration during previous studies (1965-78), although the amount of increase in nitrate concentrations observed over the previous 10 or more years was not as great as the seasonal fluctuations observed during this study. Short-term seasonal fluctuations are greater than apparent historical increases in nitrate concentration. Concentrations of sulfate, chloride, and, especially, nitrate were significantly higher in irrigated areas than in uncultivated areas. Mean nitrite plus nitrate nitrogen concentrations were 4.3 mg/L in uncultivated (natural) areas relatively unaffected by agriculture, 5.4 mg/L in nonirrigated cultivated areas, and 17 mg/L in irrigated cultivated areas. The mean nitrite plus nitrate nitrogen concentration in uncultivated areas was greater than the usually observed background levels of less than 1 mg/L (as nitrogen), which may indicate that areas thought to be natural actually are affected by agricultural land use. Several statistical tests indicate that nitrate concentrations are significantly higher in irrigated cultivated areas than in nonirrigated cultivated areas. The difference in nitrate concentrations between irrigated and nonirrigated areas suggests that nitrate from agricultural fertilizer is being leached during heavy rainfall or irrigation periods as a result of higher concentrations of nitrogen being maintained in the soil to enhance yields of corn and potatoes. Four of eight wells sampled for herbicides in west-central Minnesota had detectable concentrations of the triazine herbicide atrazine that ranged from 0.2 to 0.6 micrograms per liter. These concentrations were well below the water-quality guidelines published by the Canadian Inland Waters Directorate, Water Quality Branch, which specify 100 micrograms per liter as the maximum permissible concentration for the group of triazine herbicides in a raw drinking-water supply.

Minnesota↗