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At least 1,045 records · Page 58Linked to original sources
USGS2018

Rearing performance of juvenile brown trout Salmo trutta fed a bioprocessed soybean meal diet with differing velocity regimes

This 121-day experiment evaluated the rearing performance of brown trout Salmo trutta fed one of two isonitrogenous and isocaloric diets (46% protein, 16% lipid) and reared at velocities of either 2.8 or 16.1 cm/s. Fishmeal was the primary protein source for the reference diet, which was compared to a bioprocessed soybean meal ingredient that replaced approximately 67% of the fishmeal in the experimental diet. At the end of the experiment, there were no significant differences in gain, percent gain, feed conversion rates, nor specific growth rates between the dietary treatments. There were also no significant differences in intestinal morphology, splenosomatic, hepatosomatic, and viscerosomatic indices related to diet composition. However, gain, percent gain, feed fed, and specific growth rate were all significantly greater in brown trout reared at the higher velocity. No significant differences in any of the other variables measured were observed between the velocity treatments. There were no significant interactions between diet and velocity in any of the variables. Based on the results of this study, bioprocessed soybean meal can replace at least 67% of the fish meal in brown trout diets, regardless of the rearing velocities used in this study. Higher rearing velocities are recommended to maximize juvenile brown trout growth rates.

Open Journal of Animal Sciences↗
USGS1979

Monitoring massive fracture growth at 2-km depths using surface tiltmeter arrays

Tilt due to massive hydraulic fractures induced in sedimentary rocks at depths of up to 2.2 km have been recorded by surface tiltmeters. Injection of fluid volumes up to 4 · 10 5 liters and masses of propping agent up to 5 · 10 5 kg is designed to produce fractures approximately 1 km long, 50–100 m high and about 1 cm wide. The surface tilt data adequately fit a dislocation model of a tensional fault in a half-space. Theoretical and observational results indicate that maximum tilt occurs at a distance off the strike of the fracture equivalent to 0.4 of the depth to the fracture. Azimuth and extent of the fracture deduced from the geometry of the tilt field agree with other kinds of geophysical measurements. Detailed correlation of the tilt signatures with pumping parameters (pressure, rate, volume, mass) have provided details on asymmetry in geometry and growth rate. Whereas amplitude variations in tilt vary inversely with the square of the depth, changes in flow rate or pressure gradient can produce a cubic change in width. These studies offer a large-scale experimental approach to the study of problems involving fracturing, mass transport, and dilatancy processes.

Tectonophysics↗
USGS2015

Climate change and physical disturbance cause similar community shifts in biological soil crusts

Biological soil crusts (biocrusts)—communities of mosses, lichens, cyanobacteria, and heterotrophs living at the soil surface—are fundamental components of drylands worldwide, and destruction of biocrusts dramatically alters biogeochemical processes, hydrology, surface energy balance, and vegetation cover. While there has been long-standing concern over impacts of 5 physical disturbances on biocrusts (e.g., trampling by livestock, damage from vehicles), there is also increasing concern over the potential for climate change to alter biocrust community structure. Using long-term data from the Colorado Plateau, USA, we examined the effects of 10 years of experimental warming and altered precipitation (in full-factorial design) on biocrust communities, and compared the effects of altered climate with those of long-term physical 10 disturbance (>10 years of replicated human trampling). Surprisingly, altered climate and physical disturbance treatments had similar effects on biocrust community structure. Warming, altered precipitation frequency [an increase of small (1.2 mm) summer rainfall events], and physical disturbance from trampling all promoted early successional community states marked by dramatic declines in moss cover and increased cyanobacteria cover, with more variable effects 15 on lichens. While the pace of community change varied significantly among treatments, our results suggest that multiple aspects of climate change will affect biocrusts to the same degree as physical disturbance. This is particularly disconcerting in the context of warming, as temperatures for drylands are projected to increase beyond those imposed by the climate treatments used in our study.

PNAS↗
USGS2014

Structure and vulnerability of Pacific Northwest tidal wetlands – A summary of wetland climate change research by the Western Ecology Division, U.S. EPA

Climate change poses a serious threat to the tidal wetlands of the Pacific Northwest (PNW) region of the U.S. In response to this threat, scientists at the Western Ecology Division of the U.S. EPA at and the Western Fisheries Research Center of the U.S. Geological Survey, along with other partners, initiated a series of studies on the structure and vulnerability of tidal wetlands to climate change. One research thrust was to evaluate community structure of PNW marshes, experimentally assess the vulnerability of marsh plants to inundation and salinity stress (as would happen with sea level rise), and evaluate the utility of the National Wetland Inventory (NWI) classification system. Another research thrust was to develop tools that provide insights into possible impacts of climate change. This effort included enhancing the Sea Level Affecting Marshes Model (SLAMM) to predict the effects of sea level rise on submerged aquatic vegetation (Zostera marina) distributions, evaluating changes in river flow into coastal estuaries in response to precipitation changes, and synthesizing Pacific Coast estuary, watershed, and climate data in a downloadable tool. Because the research resulting from these efforts was published in multiple venues, we summarized them in this document. We anticipate that future research efforts by the U.S. EPA will continue with a focus on climate change impacts on a regional scale.

California, Oregon, Washington↗
USGS2005

Experimental and geochemical evidence for derivation of the El Capitan Granite, California, by partial melting of hydrous gabbroic lower crust

Partial melting of mafic intrusions recently emplaced into the lower crust can produce voluminous silicic magmas with isotopic ratios similar to their mafic sources. Low-temperature (825 and 850°C) partial melts synthesized at 700 MPa in biotite-hornblende gabbros from the central Sierra Nevada batholith (Sisson et al. in Contrib Mineral Petrol 148:635–661, 2005) have major-element and modeled trace-element (REE, Rb, Ba, Sr, Th, U) compositions matching those of the Cretaceous El Capitan Granite, a prominent granite and silicic granodiorite pluton in the central part of the Sierra Nevada batholith (Yosemite, CA, USA) locally mingled with coeval, isotopically similar quartz diorite through gabbro intrusions (Ratajeski et al. in Geol Soc Am Bull 113:1486–1502, 2001). These results are evidence that the El Capitan Granite, and perhaps similar intrusions in the Sierra Nevada batholith with lithospheric-mantle-like isotopic values, were extracted from LILE-enriched, hydrous (hornblende-bearing) gabbroic rocks in the Sierran lower crust. Granitic partial melts derived by this process may also be silicic end members for mixing events leading to large-volume intermediate composition Sierran plutons such as the Cretaceous Lamarck Granodiorite. Voluminous gabbroic residues of partial melting may be lost to the mantle by their conversion to garnet-pyroxene assemblages during batholithic magmatic crustal thickening.

Contributions to Mineralogy and Petrology↗
USGS2009

Attempts to identify Clostridium botulinum toxin in milk from three experimentally intoxicated Holstein cows

Three adult lactating Holstein cows were injected in the subcutaneous abdominal vein with 175 ng/kg of body weight of Clostridium botulinum type C toxin (451 cow median toxic doses) to determine if this botulinum toxin crosses the blood–milk barrier. Whole blood (in sodium heparin) and clotted blood serum samples were taken at 0 min, 10 min, and 3, 6, 9, and 12 h postinoculation. Milk samples were taken at 0 min and at 3, 6, 9 and 12 h postinoculation. All samples were tested for the presence of the toxin using the mouse bioassay and immunostick ELISA test. The immunostick ELISA identified the toxin in whole blood and the mouse bioassay identified the toxin in serum at all times examined in all 3 animals. Toxin was not identified by either detection method in milk samples collected from the 3 animals. From these results, it appears that Clostridium botulinum type C toxin does not cross from the blood to the milk in detectable concentrations.

Journal of Dairy Science↗
USGS2013

Assessing effects of stocked trout on nongame fish assemblages in southern Appalachian Mountain streams

Fisheries managers are faced with the challenge of balancing the management of recreational fisheries with that of conserving native species and preserving ecological integrity. The negative effects that nonnative trout species exert on native trout are well documented and include alteration of competitive interactions, habitat use, and production. However, the effects that nonnative trout may exert on nongame fish assemblages are poorly understood. Our objectives were to quantify the effects of trout stocking on native nongame fish assemblages intensively on one newly stocked river, the North Toe River, North Carolina, and extensively on other southern Appalachian Mountain streams that are annually stocked with trout. In the intensive study, we adopted a before-after, control-impact (BACI) experimental design to detect short-term effects on the nongame fish assemblage and found no significant differences in fish density, species richness, species diversity, or fish microhabitat use associated with trout stocking. We observed differences in fish microhabitat use between years, however, which suggests there is a response to environmental changes, such as the flow regime, which influence available habitat. In the extensive study, we sampled paired stocked and unstocked stream reaches to detect long-term effects from trout stocking; however, we detected no differences in nongame fish density, species richness, species diversity, or population size structure between paired sites. Our results revealed high inherent system variation caused by natural and anthropogenic factors that appear to overwhelm any acute or chronic effect of stocked trout. Furthermore, hatchery-reared trout may be poor competitors in a natural setting and exert a minimal or undetectable impact on native fish assemblages in these streams. These findings provide quantitative results necessary to assist agencies in strategic planning and decision making associated with trout fisheries, stream management, and conservation of native fishes.

Transactions of the American Fisheries Society↗
USGS2023

Characterization of fish assemblages in eleven multi-use reservoirs from North Carolina, USA

Managing impounded river systems is a recurring challenge for aquatic resource professionals because reservoirs serve multiple functions with different ecological and socioeconomic outcomes. However, research on fishes in reservoirs has disproportionally focused on recreationally and economically important species, with less attention directed toward fish assemblages despite the potential for management at the assemblage level. As such, evaluation of relationships between reservoir fish assemblages and biotic and abiotic factors and testing whether assemblage structure is affected by changing environmental conditions may deepen ecological understanding and provide insights for reservoir fisheries management. Our overall objective was to assess these relationships in 11 reservoirs from North Carolina, USA. We sampled fish assemblages in the reservoirs, which spanned five river basins representing a range of habitat conditions, using experimental gillnets and pulsed DC nighttime electrofishing. Multivariate statistical analyses indicated that taxonomic differences in fish assemblage composition among river basins followed a gradient of productivity. The top contributing species to reservoir dissimilarity were bluegill ( Lepomis macrochirus ), gizzard shad ( Dorosoma cepedianum ), black crappie ( Pomoxis nigromaculatus ), and white perch ( Morone americana ). These four species were positively associated with factors that reflect increasing eutrophic conditions in the 11 reservoirs and could, therefore, serve as indicators of reservoir productivity, anthropogenic influence, and fish assemblage structure, in addition to their key role in reservoir fisheries management. Whereas ­fisheries research has historically focused on assessing fish ­populations, our results illustrate the ecological and management insights derived from simultaneously collecting assemblage- and population-level data. Research on reservoir fish assemblages in relation to biotic and abiotic conditions may help advance fish ecology and management alike.

North Carolina↗
USGS2025

Bridging theory and practice to inform seed selection for restoration

Introduction Land managers often face the critical decision of what plant materials to select for ecological restoration. Selection depends on factors that span ecological conditions and human interventions in the restoration process, which can strongly influence the recovery of a degraded ecosystem. Objectives To improve the seed selection process, we compared scientific literature and guidance from five federal agencies to bridge seed selection “theory” and “practice” in the interior western and central United States. Methods We extracted recurring themes and keywords associated with abiotic, biotic, land management, and producer practices that influence seed selection and analyzed their proportional use between agency guidance and scientific literature. Results We identified significant overlap between key concepts in guidance and literature, highlighting the interconnectedness between science and management. However, nuanced patterns emerged across seed selection themes, including more focus in the literature on local adaptation and genetic structure, ramifications of introducing gene flow and artificial selection during plant production, and provenancing strategies to address changing climatic conditions. In contrast, agency guidance focused on genetically appropriate and environmentally suitable seed selection and practical concerns, including seed cost, availability, and diversity. Seed selection studies in the literature were concentrated in the Great Basin and Colorado Plateau, scattered in the Great Plains, and were largely experimental. Conclusions Our review suggests new opportunities for co-production of science and decision-making frameworks among researchers, land managers, and seed producers to inform seed selection guidance for restoration.

Restoration Ecology↗
USGS2006

Monitoring Inland Storm Surge and Flooding from Hurricane Rita

Pressure transducers (sensors) and high-water marks were used to document the inland water levels related to storm surge generated by Hurricane Rita in southwestern Louisiana and southeastern Texas. On September 22-23, 2005, an experimental monitoring network of sensors was deployed at 33 sites over an area of about 4,000 square miles to record the timing, extent, and magnitude of inland hurricane storm surge and coastal flooding. Sensors were programmed to record date and time, temperature, and barometric or water pressure. Water pressure was corrected for changes in barometric pressure and salinity. Elevation surveys using global-positioning systems and differential levels were used to relate all storm-surge water-level data, reference marks, benchmarks, sensor measuring points, and high-water marks to the North American Vertical Datum of 1988 (NAVD 88). The resulting data indicated that storm-surge water levels over 14 feet above NAVD 88 occurred at three locations, and rates of water-level rise greater than 5 feet per hour occurred at three locations near the Louisiana coast.

Fact Sheet↗
USGS2001

Water conditioning and whooping crane survival after release in Florida

About 50% of the whooping cranes (Grus americana) released in Florida die within the first year of release. Most of these deaths and those in subsequent years result from bobcat (Lynx rufus) predation. Choosing release sites in open marshes away from bobcat habitat has improved survival. We hypothesized that exposure to ponds (water conditioning) at the rearing site would encourage birds to roost in deeper water marshes after release and such exposure would thereby reduce bobcat predation. In this study, we moved young birds (ca 50 days of age) to netted pens with large (15-m diameter), deep 30-60 cm) naturally vegetated ponds. We randomly assigned the costume-reared whooping cranes into 2 equal-sized groups at fledging. Some groups were placed in pens with a pond (experimental or ponded groups) and the others we reared without additional water exposure (control groups). All birds in the pens with ponds used the water. At night, they roosted at a depth of 36-46 cm. During the day, the birds used the ponds as well as other areas of the pen. We released 3 pairs of water-conditioned and control cohorts, 1 set in 1995 and 2 in 1996. No obvious behavioral differences were noted between the cohorts released in those years. Controls survived as expected (about 60% first year survival). The water-conditioned birds had much higher survival the first year (85%) and continued to survive better for the next 3 years.

Book chapter↗
USGS2023

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2022 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance, 2015; Breed et al., 2018; Winkler et al., 2018; NASEM, 2023). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. The U.S. Geological Survey (USGS) Southwest Biological Science Center’s (SBSC’s) research activities to support CPNPP in FY22 followed the FY22 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Biden-Harris Administration Executive Order 14008 (Tackling the Climate Crisis at Home and Abroad), and Department of Interior Priority #4 (Working to conserve at least 30% each of our lands and waters by the year 2030). Research activities in FY22 centered on landscape genomics, monitoring common garden and seeding experiments near Vernal and Moab, UT, conducting experimental treatments using the GRID (Germination for Restoration Information and Decision-making) framework, and continuing newer genetics projects to investigate the impact of productions techniques on plant materials and restoration treatments on native plant communities. These activities were supported by two biological science technicians. The effects of the SARS-CoV-2 pandemic were less visible in FY22, allowing SBSC to catch up on backlogged laboratory work. The overall progress of SBSC’s research remains on track with respect to the 5-year plan. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY22, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, and Daniel Winkler, spent a considerable amount of time providing expertise and support for individual projects. Work activities performed in support of each 5-year plan goal are discussed in turn.

Colorado Plateau↗
USGS2010

Rheology of the lithosphere

During the quadrennial term 1979–1982, major advances have been made in our knowledge of the rheology of the oceanic lithosphere by the skillful combination of experimental and theoretical rock mechanics, seismology and marine geophysics in increasingly sophisticated models for the flexure of the oceanic lithosphere at seamounts and island chains, along transform faults, and at subduction zones. The relative simplicity of plate bending geometry, thermal history, and mineralogical and chemical compositions of the oceanic plates in these settings make the geophysical observations very powerful constraints on the in situ rheology of the oceanic lithosphere. In the first part of this paper, I review the laboratory work on materials appropriate to the oceanic lithosphere with emphasis on contributions during the quadrennial period and the need for future work. The important results of flexure models incorporating realistic material properties are then summarized.

Reviews of Geophysics and Space Physics↗
USGS2005

Combined use of the ASK and SHK-1 cell lines to enhance the detection of infectious salmon anemia virus

Infectious salmon anemia (ISA) is a severe disease primarily affecting commercially farmed Atlantic salmon (Salmo salar) in seawater. The disease has been reported in portions of Canada, the United Kingdom, the Faroe Islands, and the United States. Infectious salmon anemia virus (ISAV), the causative agent of ISA, has also been isolated from several asymptomatic marine and salmonid fish species. Diagnostic assays for the detection of ISAV include virus isolation in cell culture, a reverse transcriptase-PCR, an enzyme-linked immunosorbent assay, and an indirect fluorescent antibody test. Virus isolation is considered the gold standard, and 5 salmonid cell lines are known to support growth of ISAV. In this study, the relative performance of the salmon head kidney 1 (SHK-1), Atlantic salmon kidney (ASK), and CHSE-214 cell lines in detecting ISAV was evaluated using samples from both experimentally and naturally infected Atlantic salmon. Interlaboratory comparisons were conducted using a quality control-quality assurance ring test. Both the ASK and SHK-1 cell lines performed well in detecting ISAV, although the SHK-1 line was more variable in its sensitivity to infection and somewhat slower in the appearance of cytopathic effect. Relative to the SHK-1 and ASK lines, the CHSE-214 cell line performed poorly. Although the ASK line appeared to represent a good alternative to the more commonly used SHK-1 line, use of a single cell line for diagnostic assays may increase the potential for false-negative results. Thus, the SHK-1 and ASK cell lines can be used in combination to provide enhanced ability to detect ISAV.

Journal of Veterinary Diagnostic Investigation↗
USGS2024

Low rate of population establishment of a freshwater invertebrate (Gammarus lacustris) in experimental conservation translocations

Conservation translocations may be a useful tool for the restoration of declining freshwater invertebrates, but they are poorly represented in the literature. We conducted a before-after/control-impact (BACI) experiment to test the efficacy of conservation translocation for re-establishing abundant populations of the amphipod Gammarus lacustris , a declining species and wildlife food resource in depressional wetlands in the upper Midwest of the United States of America. Each study site ( n = 19) contained at least one treatment wetland receiving translocated G. lacustris from a local donor and one control wetland. We selected study wetlands based on a suite of wetland characteristics and randomly assigned recipient versus control treatment. Gammarus lacustris was detected post-translocation at only 2 of 22 recipient wetlands (1 of 19 sites). Overall, there was a statistical increase in G. lacustris density in recipient wetlands compared to controls; however, the results were of minimal biological significance due to being driven by a single site with low G. lacustris densities. Accordingly, our results suggest that future conservation translocations of amphipods might be successful if limited to recently restored wetlands or informed by a more complex habitat suitability model to differentiate dispersal limitations from habitat limitations. To develop such a model would involve identifying the fewest, most influential physical and biological factors (e.g. wetland size/structure, fish, aquatic vegetation, and water chemistry) from the numerous inter-related factors that correlate with the abundance of naturally occurring G. lacustris ; candidate wetlands to receive amphipods would be those for which the model predicts abundant G. lacustris but in which they do not presently occur.

Minnesota↗
USGS2000

Susceptibility of Arctic char to experimental challenge with Infectious Hematopoietic Necrosis Virus (IHNV) and Infectious Pancreatic Necrosis Virus (IPNV)

Arctic char Salvelinus alpinus were exposed to the fish pathogens infectious hematopoietic necrosis virus (IHNV) and infectious pancreatic necrosis virus (IPNV) to estimate susceptibility of the species to infection. Fish were immersion challenged at 46, 74, and 95 d posthatch for 5 h in viral concentration of 10 3 or 10 5 PFU(plaque-forming units)/mL and were monitored for 21 d postchallenge. Fish that died were assayed individually for virus-associated mortality, and survivors were assayed individually to estimate prevalence of virus carrier status. Arctic char succumbed to IHNV infection with population losses as high as 41%, and prevalence of IHNV carriers in surviving fish was 24% or less with virus titers in carrier fish ranging from 2.5 × 10 2 PFU/g to greater than 1.3 × 10 6 PFU/g. Infections with IPNV resulted in losses of 20% or less, and prevalence of IPNV carriers in surviving fish was as high as 82% with virus titers in carrier fish ranging from 2.5 × 10 2 PFU/g to greater than 5.0 × 10 6 PFU/g. Logistic regression models were developed for the mortality and infection data for each virus. For IHNV, the odds of dying or becoming infected were significantly greater for the fish from the 74-d age-group than for the fish from the 46-d or 95-d age-groups. Fish exposed to 10 5 PFU of IHNV/mL had significantly greater odds of dying or becoming infected than fish exposed to 10 3 PFU/mL. For IPNV, the odds of dying were significantly greater for the 74-d age-group compared with the other two age-groups. The 74-d fish were also significantly more likely to become infected than the 95-d-old fish. Fish exposed to 10 5 PFU of IPNV/mL had significantly greater odds of dying or becoming infected than fish exposed to 10 3 PFU of IPNV /mL.

Journal of Aquatic Animal Health↗
USGS2013

Burrowing, byssus, and biomarkers: behavioral and physiological indicators of sublethal thermal stress in freshwater mussels (Unionidae)

Recent research has elucidated the acute lethal effects of elevated water temperatures to glochidia (larvae), juvenile, and adult life stages of freshwater mussels (Order Unionida), but few studies have focused on sublethal effects of thermal stress. We evaluated the sublethal effects of elevated temperature on burrowing behavior and byssus production in juveniles, and on enzymatic biomarkers of stress in adults in acute (96 h) laboratory experiments in sediment, with two acclimation temperatures (22 and 27 °C) and two experimental water levels (watered and dewatered) as proxies for flow regime. Increasing temperature significantly reduced burrowing in all five species tested, and the dewatered treatment (a proxy for drought conditions) reduced burrowing in all but Amblema plicata . Production of byssal threads was affected most drastically by flow regime, with the probability of byssus presence reduced by 93–99% in the dewatered treatment, compared to the watered treatment (a proxy for low flow conditions); increasing temperature alone reduced byssus by 18–35%. Alanine aminotransferase and aspartate aminotransferase were significantly affected by treatment temperature in the 27 °C acclimation, watered test ( p =  0.04 and 0.02, respectively). Our results are important in the context of climate change, because stream temperature and flow are expected to change with increasing air temperature and altered precipitation patterns.

Marine and Freshwater Behaviour and Physiology↗
USGS2025

Delayed incubation leads to hatching failure of a Burrowing Owl ( Athene cunicularia ) nest

Birds face strong selective pressures to complete individual nesting attempts as quickly as possible to minimize exposure of nests to predators and weather, maximize renesting potential, and maximize hatching success. As a result, the duration of developmental periods and of overall nest periods are often relatively constant within species. However, birds may sometimes be subject to acute energetic constraints that may preclude them from initiating incubation at the optimal time. We report an extraordinary case of delayed incubation by a female Burrowing Owl ( Athene cunicularia ) in Oregon, USA, which contrasted sharply with a large sample of nests monitored by motion-activated video cameras in western North America from 2015 to 2018. The focal female delayed incubation by 11 d following clutch completion and subsequently experienced near total hatching failure of her clutch. This observation corroborates previous experimental studies regarding the limits to egg viability and trade-offs between the timing of incubation onset and hatching success. These findings illustrate the acute trade-offs faced by nesting birds, and the cost of delayed incubation that we observed in this owl could help explain the cause of asynchronous hatching.

Oregon↗