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National Land Cover Database 2001 (NLCD01) Tile 4, Southeast United States: NLCD01_4

This 30-meter data set represents land use and land cover for the conterminous United States for the 2001 time period. The data have been arranged into four tiles to facilitate timely display and manipulation within a Geographic Information System (see http://water.usgs.gov/GIS/browse/nlcd01-partition.jpg). The National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (http://www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). One of the primary goals of the project is to generate a current, consistent, seamless, and accurate National Land Cover Database (NLCD) circa 2001 for the United States at medium spatial resolution. For a detailed definition and discussion on MRLC and the NLCD 2001 products, refer to Homer and others (2004), (see: http://www.mrlc.gov/mrlc2k.asp). The NLCD 2001 was created by partitioning the United States into mapping zones. A total of 68 mapping zones (see http://water.usgs.gov/GIS/browse/nlcd01-mappingzones.jpg), were delineated within the conterminous United States based on ecoregion and geographical characteristics, edge-matching features, and the size requirement of Landsat mosaics. Mapping zones encompass the whole or parts of several states. Questions about the NLCD mapping zones can be directed to the NLCD 2001 Land Cover Mapping Team at the USGS/EROS, Sioux Falls, SD (605) 594-6151 or mrlc@usgs.gov.

Data Series↗

National Land Cover Database 2001 (NLCD01) Imperviousness Layer Tile 2, northeast United States: IMPV01_2

This 30-meter resolution data set represents the imperviousness layer for the conterminous United States for the 2001 time period. The data have been arranged into four tiles to facilitate timely display and manipulation within a Geographic Information System, browse graphic: nlcd01-partition. The National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). One of the primary goals of the project is to generate a current, consistent, seamless, and accurate National Land Cover Database (NLCD) circa 2001 for the United States at medium spatial resolution. For a detailed definition and discussion on MRLC and the NLCD 2001 products, refer to Homer and others (2004) and http://www.mrlc.gov/mrlc2k.asp.. The NLCD 2001 was created by partitioning the United States into mapping-zones. A total of 68 mapping-zones browse graphic: nlcd01-mappingzones.jpg were delineated within the conterminous United States based on ecoregion and geographical characteristics, edge-matching features, and the size requirement of Landsat mosaics. Mapping-zones encompass the whole or parts of several states. Questions about the NLCD mapping zones can be directed to the NLCD 2001 Land Cover Mapping Team at the USGS/EROS, Sioux Falls, SD (605) 594-6151 or mrlc@usgs.gov.

northeast United States↗

National Land Cover Database 2001 (NLCD01) Imperviousness Layer Tile 3, Southwest United States: IMPV01_3

This 30-meter resolution data set represents the imperviousness layer for the conterminous United States for the 2001 time period. The data have been arranged into four tiles to facilitate timely display and manipulation within a Geographic Information System, browse graphic: nlcd01-partition. The National Land Cover Data Set for 2001 was produced through a cooperative project conducted by the Multi-Resolution Land Characteristics (MRLC) Consortium. The MRLC Consortium is a partnership of Federal agencies (www.mrlc.gov), consisting of the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency (USEPA), the U.S. Department of Agriculture (USDA), the U.S. Forest Service (USFS), the National Park Service (NPS), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), and the USDA Natural Resources Conservation Service (NRCS). One of the primary goals of the project is to generate a current, consistent, seamless, and accurate National Land Cover Database (NLCD) circa 2001 for the United States at medium spatial resolution. For a detailed definition and discussion on MRLC and the NLCD 2001 products, refer to Homer and others (2004) and http://www.mrlc.gov/mrlc2k.asp.. The NLCD 2001 was created by partitioning the United States into mapping-zones. A total of 68 mapping-zones browse graphic: nlcd01-mappingzones.jpg were delineated within the conterminous United States based on ecoregion and geographical characteristics, edge-matching features, and the size requirement of Landsat mosaics. Mapping-zones encompass the whole or parts of several states. Questions about the NLCD mapping zones can be directed to the NLCD 2001 Land Cover Mapping Team at the USGS/EROS, Sioux Falls, SD (605) 594-6151 or mrlc@usgs.gov.

Data Series↗

On forming an Ornithological Council

It has begun to bother me that the ornithological societies seem to be playing an extremely minor role in anything to do with conserving, preserving, or salvaging the environment. We realize-or we tell each other that we do-that birds are an important part of the world's ecosystems, that they can often serve as indicator species of environmental problems, that what affects bird populations can and will eventually affect the human population. But as organizations, we lack a mechanism to tell anyone other than ourselves about our concerns or how the knowledge our study produces can be used to help efforts to protect either the birds themselves or the environment of which they and we are parts. We can, and some do, share our concerns and knowledge individually, but we have no effective way to say that 5,000 ornithologists think that "Plan A is a good idea" or "Plan B could lead to declines in bird populations" or even that "Plan C would have a very bad (or good) effect on the scientific study of birds that is needed to know whether Plans A and B are good." Our current mechanism for action is pretty much restricted to adopting resolutions saying, in effect, "We think you shouldn't have done that" or "We wish you would do something." Even the timing of this mechanism leaves much to be desired if we really intend to have any effect.

The Auk↗

Delineating priority habitat areas for the conservation of Andean bears in northern Ecuador

We sought to identify priority areas for the conservation of Andean bear (Tremarctos ornatus) habitat in the northern portion of the eastern Andean cordillera in Ecuador. The study area included pa??ramo and montane forest habitats within the Antisana and Cayambe-Coca ecological reserves, and unprotected areas north of these reserves with elevations ranging from 1,800 to 4,300 m. We collected data on bear occurrence along 53 transects during 2000-01 in the Oyacachi River basin, an area of indigenous communities within the Cayambe-Coca Ecological Reserve. We used those data and a set of 7 environmental variables to predict suitability of Andean bear habitat using Mahalanobis distance, a multivariate measure of dissimilarity. The Mahalanobis distance values were classified into 5 classes of habitat suitability and generalized to a resolution of 1,650-m ?? 1,650-m grid cells. Clusters of grid cells with high suitability values were delineated from the generalized model and denned as important habitat areas (IHAs) for conservation. The IHAs were ranked using a weighted index that included factors of elevation range, influence from disturbed areas, and current conservation status. We identified 12 IHAs, which were mainly associated with pa??ramo and cloud forest habitats; 2 of these areas have high conservation priorities because they are outside existing reserves and close to areas of human pressure. The distribution of the IHAs highlighted the role of human land use as the main source of fragmentation of Andean bear habitat in this region, emphasizing the importance of preserving habitat connectivity to allow the seasonal movements among habitat types that we documented for this species. Furthermore, the existence of areas with high habitat suitability close to areas of intense human use indicates the importance of bear-human conflict management as a critical Andean bear conservation strategy. We suggest that a promising conservation opportunity for this species is linked to its occurrence in highland habitats, which play a key role in the maintenance of long-term water supplies.

Ursus↗

Non-freezing cold event stresses can cause significant damage to mangrove seedlings: Assessing the role of warming and nitrogen enrichment in a mesocosm study

Mangroves are expanding poleward along coastlines globally as a response to rising temperatures and reduced incidence of freezing under climate change. Yet, knowledge of mangrove responses to infrequent cold events in the context of future global and regional environmental changes is limited. We initiated a mesocosm experiment in which the seedlings of two mangrove species were grown either at ambient temperature or under warming with and without nitrogen (N) loading. During a short winter period, an unusually severe cold event occurred with the lowest temperature of 2°C. We assessed the possible response of these two mangrove species to the cold stress. We found that the cold event caused various degrees of damage to the seedlings of both mangrove species, with the warming treatment seemingly protecting leaves and branches from the cold damage. However, warming did not buffer mangroves to mortality from those low temperatures in either species. The cold event resulted in a significant decrease in seedling growth rates and net ecosystem CO2 uptake in the post-cold period relative to the pre-cold period, though the cold event did not alter the effects of warming on these parameters of both mangrove species. The cold event differentially altered physiological responses of the two species growing under N loading, with A. marina growing in higher N concentrations having a reduced growth response after the cold event, whereas B. gymnorrhiza displayed no change in post-cold period versus pre-cold period growth. Our findings suggest the pivotal role of cold events, versus freeze events, in regulating mangrove survival and growth even under future warming scenarios. Two mangrove species exhibited differential survival and growth responses to the cold event at different N concentrations, which has implications for how we can restore and conserve mangroves among the world's eutrophied sub-tropical estuaries and with future warming.

Environmental Research↗

Long-term spatial heterogeneity in mallard distribution in the Prairie pothole region

The Prairie Pothole Region (PPR) of north-central United States and south-central Canada supports greater than half of all breeding mallards ( Anas platyrhynchos ) annually counted in North America and is the focus of widespread conservation and research efforts. Allocation of conservation resources for this socioeconomically important population would benefit from an understanding of the nature of spatiotemporal variation in distribution of breeding mallards throughout the 850,000 km 2 landscape. We used mallard counts from the Waterfowl Breeding Population and Habitat Survey to test for spatial heterogeneity and identify high- and low-abundance regions of breeding mallards over a 50-year time series. We found strong annual spatial heterogeneity in all years: 90% of mallards counted annually were on an average of only 15% of surveyed segments. Using a local indicator of spatial autocorrelation, we found a relatively static distribution of low-count clusters in northern Montana, USA, and southern Alberta, Canada, and a dynamic distribution of high-count clusters throughout the study period. Distribution of high-count clusters shifted southeast from northwestern portions of the PPR in Alberta and western Saskatchewan, Canada, to North and South Dakota, USA, during the latter half of the study period. This spatial redistribution of core mallard breeding populations was likely driven by interactions between environmental variation that created favorable hydrological conditions for wetlands in the eastern PPR and dynamic land-use patterns related to upland cropping practices and government land-retirement programs. Our results highlight an opportunity for prioritizing relatively small regions within the PPR for allocation of wetland and grassland conservation for mallard populations. However, the extensive spatial heterogeneity in core distributions over our study period suggests such spatial prioritization will have to overcome challenges presented by dynamic land-use and climate patterns in the region, and thus merits additional monitoring and empirical research to anticipate future population distribution. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

Wildlife Society Bulletin↗

Stock assessment in inland fisheries: a foundation for sustainable use and conservation

Fisheries stock assessments are essential for science-based fisheries management. Inland fisheries pose challenges, but also provide opportunities for biological assessments that differ from those encountered in large marine fisheries for which many of our assessment methods have been developed. These include the number and diversity of fisheries, high levels of ecological and environmental variation, and relative lack of institutional capacity for assessment. In addition, anthropogenic impacts on habitats, widespread presence of non-native species and the frequent use of enhancement and restoration measures such as stocking affect stock dynamics. This paper outlines various stock assessment and data collection approaches that can be adapted to a wide range of different inland fisheries and management challenges. Although this paper identifies challenges in assessment, it focuses on solutions that are practical, scalable and transferrable. A path forward is suggested in which biological assessment generates some of the critical information needed by fisheries managers to make effective decisions that benefit the resource and stakeholders.

Reviews in Fish Biology and Fisheries↗

Accuracy, accessibility, and institutional capacity shape the utility of habitat models for managing and conserving rare plants on western public lands

Public lands are often managed for multiple uses ranging from energy development to rare plant conservation. Habitat models can help land managers assess and mitigate potential effects of projects on rare plants, but it is unclear how models are currently being used. Our goal was to better understand how staff in the Bureau of Land Management currently use habitat models to inform their decisions, and perceived challenges and benefits associated with that use. We first examined litigation documents to determine whether the agency has been challenged on its use of data for rare plants and found no relevant legal challenges. Second, we analyzed model use in National Environmental Policy Act (NEPA) documents and found no clear citations of habitat models. Finally, we conducted interviews with agency staff who analyze potential effects of proposed actions on rare plants in NEPA documents. The primary challenges interviewees faced in using models related to data organization and access, model quality and accuracy, and institutional capacity. Interviewees believed models could be used more to inform decisions and actions to conserve rare plants and rare plant habitat on public lands and recommended improving staff access to models, creating models for additional species, and addressing staffing limitations.

Arizona, California, Colorado, New Mexico, Utah, W↗

Weeds of Hawaii’s lands devoted to watershed protection and biodiversity conservation: Role of biological control as the missing piece in an integrated pest management strategy

Despite Hawaii’s reputation as an extinction icon, significant biological resources remain, especially in watersheds, natural areas, and specialized edaphic sites (e.g., lava dry forest, coastal). While direct habitat destruction by humans continues, human-facilitated biological invaders are currently the primary agents of continuing degradation. The ability of invasive plants to have prolific seed production, efficient dispersal systems, and to become established in dense vegetation, complicated by Hawaii’s rugged topography, appears to render mechanical and chemical control as mere holding actions. Costly, ‘environmentally unfriendly’, and often ineffective, strategies using chemical and mechanical control on a large scale, despite the most valiant of efforts, can be viewed simply as attempts to buy time. Without increased levels of safely tested biological control, the seemingly inevitable result is the landscape level transformation of native forests, with potentially catastrophic consequences to cultural, biological, water, and economic resources. Increased levels of effective biological control for certain intractable invasive species appear to comprise a conspicuous ‘missing piece’ in our efforts to protect Hawaiian watersheds and other conservation lands.

Hawaii↗

Great Lakes mallard population dynamics

Breeding mallard ( Anas platyrhynchos ) populations in the Great Lakes region (Michigan, Minnesota, Wisconsin, USA) declined by >40% between 2000–2022 based on abundance data collected during spring aerial surveys. Mallards are an important waterfowl species in this region, where an estimated 60–80% of the mallard harvest is composed of locally banded birds. Extensive population monitoring datasets are available for mallards, presenting an opportunity to address complex questions such as estimating productivity at large spatial and temporal scales, identifying the effects of harvest on mallard demography, quantifying mechanisms for harvest compensation, and integrating multiple datasets to quantify the demographic drivers of population change. Our objective was to simultaneously examine factors affecting demographic parameters and their relative contribution to Great Lakes mallard population dynamics. We used 32 years of banding, band recovery, and aerial survey data collected for mallards from Michigan and Wisconsin to develop an integrated population model (IPM). We used age ratios at banding to estimate productivity, band recoveries from hunter-harvested birds to estimate annual survival and cause-specific mortality (i.e., harvest or non-hunting), and modeled abundance using aerial survey and demographic parameter estimates from 1991–2022. The IPM results indicated the decline in Great Lakes mallard abundance was caused by increased non-hunting mortality and a decline in productivity. Productivity varied spatially but temporally declined with the loss of Conservation Reserve Program area. Moreover, our productivity assessment provided evidence of density dependence in reproduction. Non-hunting mortality was 3.5–6.7 times and 1.3–4.2 times greater than harvest mortality for adult and juvenile female mallards, respectively, indicating environmental factors during spring and summer, not harvest, most greatly influenced annual mortality for female mallards. Our IPM reduced uncertainty in the factors affecting Great Lakes mallard population dynamics and indicated management actions that address non-hunting mortality and productivity would be most effective in increasing Great Lakes mallard abundance.

Michigan, Wisconsin↗

Perceived barriers to the use of assisted colonization for climate sensitive species in the Hawaiian Islands

Conservation actions to safeguard climate change vulnerable species may not be utilized due to a variety of perceived barriers. Assisted colonization, the intentional movement and release of an organism outside its historical range, is one tool available for species predicted to lose habitat under future climate change scenarios, particularly for single island or single mountain range endemic species. Despite the existence of policies that allow for this action, to date, assisted colonization has rarely been utilized for species of conservation concern in the Hawaiian Islands. Given the potential for climate driven biodiversity loss, the Hawaiian Islands are a prime location for the consideration of adaptation strategies. We used first-person interviews with conservation decision makers, managers, and scientists who work with endangered species in the Hawaiian Islands to identify perceived barriers to the use of assisted colonization. We found that assisted colonization was often not considered or utilized due to a lack of expertize with translocations; ecological risk and uncertainty, economic constraints, concerns regarding policies and permitting, concerns with public perception, and institutional resistance. Therefore, conservation planners may benefit from decision tools that integrate risk and uncertainty into decision models, and compare potential outcomes among conservation actions under consideration, including assisted colonization. Within a decision framework that addresses concerns, all conservation actions for climate sensitive species, including assisted colonization, may be considered in a timely manner.

Hawaii↗

Global patterns of tree stem growth and stand aboveground wood production in mangrove forests

Mangrove forests provide important ecological and economic services including carbon sequestration and storage. The conservation and restoration of mangroves are expected to play an important role in mitigating climate change, and understanding the factors influencing mangrove stem growth and wood production are important in predicting and improving mangrove carbon sequestration and responses to environmental change. In this study, we collected data of individual diameter at breast height (DBH) growth rate and stand level aboveground wood production in both non-plantation (commonly termed as natural) mangroves and mangrove plantations across the world. Climatic factors, proxies of edaphic factors, as well as biological factors (e.g. mangrove species) were included as explanatory variables in the analyses to determine factors influencing the global patterns of tree growth rate and stand wood production of mangroves. Using hierarchical Classification and Regression Tree (CART) analysis we found interactions among environmental and biological factors in controlling mangrove tree growth rate and stand wood production. We also found different global patterns of tree growth rate and stand wood production between non-plantation mangroves and plantations. Climatic conditions (precipitation of driest season, precipitation seasonality) were the most important factors influencing the global pattern of tree DBH growth rate in non-plantation mangroves, with edaphic and biological characteristics also playing a role under specific climatic conditions. The global pattern of stand wood production in non-plantation mangroves was primarily determined by stand mean DBH growth rate of individual trees. However, in mangrove plantations management measures, specifically species selection and planting density, were the most important factors influencing the global patterns of tree growth rate and stand wood production. Our study provides parameters for a global estimation of long-term carbon sequestration in both non-plantation mangroves and mangrove plantations. In addition, our results help us better predict the dynamics of tree growth and carbon sequestration of non-plantation mangroves under changing climate.

Forest Ecology and Management↗

Physical habitat is more than a sediment issue: A multi-dimensional habitat assessment indicates new approaches for river management

Degraded physical habitat is a common stressor affecting river ecosystems and typically addressed in the United States (US) through a regulatory focus on sediment. However, a narrow regulatory focus on sediment may overlook other aspects of physical habitat and the processes for its creation, maintenance, and degradation. In addition, there exist few “ready-to-use” regional assessments of the multiple dimensions of physical habitat to better understand continuous patterns of condition and prioritize management efforts across a large spatial scale. In this study, we use rapid habitat monitoring data to train a machine-learning ( i.e., random forest) model to predict twelve physical habitat metrics for nearly 120,000 km of nontidal rivers and streams across the Chesapeake Bay watershed, US. We capture a range of habitat conditions driven by both natural variables and anthropogenic pressures. Covariation among habitat metrics indicated two major dimensions of habitat variation: 1) coarse bed substrate and hydromorphic heterogeneity and 2) bank stability and riparian condition. The model predicted localized changes from 2001 to 2019, and the predicted areas of deterioration roughly balanced improvements across the watershed, indicating little progress towards long-term watershed management goals. To evaluate connections to regulatory and management endpoints, we compared our physical habitat predictions to paired estimates of sediment and flow alteration across the region. Sediment concentrations were greater in reaches with less bank stability and lower riparian quality; however, the relation was weak for coarse bed condition metrics, including embeddedness, which is frequently used for establishing regulatory sediment restrictions. For flow alteration, most habitat metrics had lower scores with altered flow metrics, but metrics of instream habitat heterogeneity and coarse substrate condition were most strongly affected. Increased flashy, high flows negatively affected most metrics, but coarse substrate metrics were also negatively affected by greater low flow severity. This study highlights a potential disconnect between a narrow focus on regulatory sediment targets given the multiple dimensions and responses of physical habitat. A more holistic approach to physical habitat in management interventions – one that considers hydromorphic processes, diversity and variability in microhabitats, and explicit consideration of alterations to both low and high flows – may be warranted. By providing direct estimates of multiple aspects of physical habitat, this model can help support managers in the Chesapeake Bay watershed to better understand the range of habitat conditions, identify high-quality reaches for conservation, and target potential management actions tailored to localized conditions.

Delaware, Maryland, New York, Pennsylvania, Virgin↗

Reactive uptake of trace metals in the hyporheic zone of a mining- contaminated stream, Pinal Creek, Arizona

Significant uptake of dissolved metals occurred by interaction of groundwater and surface water with hyporheic-zone sediments during transport in Pinal Creek, AZ. The extent of trace metal uptake was calculated by mass balance measurements made directly within the hyporheic zone. A conservative solute tracer injected into the stream was used to quantify hydrologic exchange with the stream and groundwater. Fractional reactive uptake of dissolved metals entering the hyporheic zone was determined at 29 sites and averaged 52 ± 25, 27 ± 19, and 36 ± 24% for Co, Ni, and Zn, compared with Mn uptake of 22 ± 19%. First-order rate constants (λ h ) of metal uptake in the hyporheic zone were determined at seven sites using the exchange rate of water derived from tracer arrival in the streambed. Reaction-time constants (1/λ h ) averaged 0.41, 0.84, and 0.38 h for Co, Ni, and Zn, respectively, and 1.3 h for Mn. In laboratory experiments with streambed sediments, metal uptake increased with preexisting Mn oxide concentration, supporting our interpretation that Mn oxides in the hyporheic zone enhance trace metal uptake. Reach-scale mass-balance calculations that include groundwater metal inputs indicated that decreases in metal loads ranged from 12 to 68% over the 7-km perennial reach depending on the metal. The decreases in metal loads are attributed to uptake of trace metals by Mn oxides in the hyporheic zone that is enhanced because of ongoing Mn oxide formation. Analysis of dissolved-metal streambed profiles and conservative solute tracers provide a valuable tool for quantifying metal uptake or release in the hyporheic zone of contaminated streams.

Arizona↗

Juvenile moose stress and nutrition dynamics related to winter ticks, landscape characteristics, climate-mediated factors and survival

Moose populations in the northeastern United States have declined over the past 15 years, primarily due to the impacts of winter ticks. Research efforts have focused on the effects of winter tick infestation on moose survival and reproduction, but stress and nutritional responses to ticks and other stressors remain understudied. We examined the influence of several environmental factors on moose calf stress hormone metabolite concentrations and nutritional restriction in Vermont, USA. We collected 407 fecal and 461 snow urine samples from 84 radio-collared moose calves in the winters of 2017–2019 (January–April) to measure fecal glucocorticoid metabolites (fGCM) concentrations and urea nitrogen:creatinine (UN:C) ratios. We used generalized mixed-effects models to evaluate the influence of individual condition, winter ticks, habitat, climate and human development on stress and nutrition in calf moose. We then used these physiological data to build generalized linear models to predict calf winter survival. Calf fGCM concentrations increased with nutritional restriction and snow depth during adult winter tick engorgement. Calf UN:C ratios increased in calves with lighter weights and higher tick loads in early winter. Calf UN:C ratios also increased in individuals with home ranges composed of little deciduous forests during adult winter tick engorgement. Our predictive models estimated that winter survival was negatively related to UN:C ratios and positively related to fGCM concentrations, particularly in early winter. By late March, as winter ticks are having their greatest toll and endogenous resources become depleted, we estimated a curvilinear relationship between fGCM concentrations and survival. Our results provide novel evidence linking moose calf stress and nutrition, a problematic parasite and challenging environment and winter survival. Our findings provide a baseline to support the development of non-invasive physiological monitoring for assessing environmental impacts on moose populations.

Vermont↗

A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding

Taxonomic identification of pollen has historically been accomplished via light microscopy but requires specialized knowledge and reference collections, particularly when identification to lower taxonomic levels is necessary. Recently, next-generation sequencing technology has been used as a cost-effective alternative for identifying bee-collected pollen; however, this novel approach has not been tested on a spatially or temporally robust number of pollen samples. Here, we compare pollen identification results derived from light microscopy and DNA sequencing techniques with samples collected from honey bee colonies embedded within a gradient of intensive agricultural landscapes in the Northern Great Plains throughout the 2010–2011 growing seasons. We demonstrate that at all taxonomic levels, DNA sequencing was able to discern a greater number of taxa, and was particularly useful for the identification of infrequently detected species. Importantly, substantial phenological overlap did occur for commonly detected taxa using either technique, suggesting that DNA sequencing is an appropriate, and enhancing, substitutive technique for accurately capturing the breadth of bee-collected species of pollen present across agricultural landscapes. We also show that honey bees located in high and low intensity agricultural settings forage on dissimilar plants, though with overlap of the most abundantly collected pollen taxa. We highlight practical applications of utilizing sequencing technology, including addressing ecological issues surrounding land use, climate change, importance of taxa relative to abundance, and evaluating the impact of conservation program habitat enhancement efforts.

Environmental Entomology↗

Assessing streamflow characteristics as limiting factors on benthic invertebrate assemblages in streams across the western United States

1. Human use of land and water resources modifies many streamflow characteristics, which can have significant ecological consequences. Streamflow and invertebrate data collected at 111 sites in the western U.S.A. were analysed to identify streamflow characteristics (magnitude, frequency, duration, timing and variation) that are probably to limit characteristics of benthic invertebrate assemblages (abundance, richness, diversity and evenness, functional feeding groups and individual taxa) and, thus, would be important for freshwater conservation and restoration. Our analysis investigated multiple metrics for each biological and hydrological characteristic, but focuses on 14 invertebrate metrics and 13 streamflow metrics representing the key associations between streamflow and invertebrates. 2. Streamflow is only one of many environmental and biotic factors that influence the characteristics of invertebrate assemblages. Although the central tendency of invertebrate assemblage characteristics may not respond to any one factor across a large region like the western U.S.A., we postulate that streamflow may limit some invertebrates. To assess streamflow characteristics as limiting factors on invertebrate assemblages, we developed a nonparametric screening procedure to identify upper (ceilings) or lower (floors) limits on invertebrate metrics associated with streamflow metrics. Ceilings and floors for selected metrics were then quantified using quantile regression. 3. Invertebrate assemblages had limits associated with all streamflow characteristics that we analysed. Metrics of streamflow variation at daily to inter-annual scales were among the most common characteristics associated with limits on invertebrate assemblages. Baseflow recession, daily variation and monthly variation, in streamflow were associated with the largest number of invertebrate metrics. Since changes in streamflow variation are often a consequence of hydrologic alteration, they may serve as useful indicators of ecologically significant changes in streamflow and as benchmarks for managing streamflow for ecological objectives. 4. Relative abundance of Plecoptera, richness of non-insect taxa and relative abundance of intolerant taxa were associated with multiple streamflow metrics. Metrics of sensitive taxa (Ephemeroptera, Plecoptera and Trichoptera), and intolerant taxa generally had ceilings associated with flow metrics while metrics of tolerant taxa, non-insects, dominance and chironomids generally had floors. Broader characteristics of invertebrate assemblages such as abundance and richness had fewer limits, but these limits were nonetheless associated with a broad range of streamflow characteristics.

Freshwater Biology↗