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USGS2024

Cryospheric sciences at the U.S. Geological Survey

Introduction The cryosphere is the collective parts of the Earth where water is in its frozen state and includes snow, glaciers, ice sheets, ice shelves, freshwater ice, sea ice, and permafrost. The cryosphere is a climate indicator and climate regulator. Surface cryosphere features, such as glaciers, snow, and sea ice, store freshwater and make the surface of the Earth bright white, which affects how much energy from the sun is absorbed or reflected by the planet. The subsurface cryosphere, such as permafrost and ground ice, stores water and other materials, including carbon, nutrients, heavy metals, and viruses. Carbon storage in permafrost is one way the cryosphere regulates the Earth's climate. Changes to the cryosphere indicate the state of the Earth's climate. The cryosphere spans many regions of the Earth, from subtropical regions of the Himalayas to polar regions of the Arctic and Antarctica, and intersects many of the Earth's spheres, including the lithosphere, biosphere, atmosphere, and hydrosphere.

Fact Sheet↗
USGS2002

Reconnaissance for selected pathogens, and review of pertinent literature, for the New River Gorge National River, West Virginia, 2000

Giardia and enteric viruses were detected in a reconnaissance study of Madam Creek and Dunloup Creek, two tributaries of the New River Gorge National River, in 2000. Cryptosporidium and pathogenic bacteria were not detected in these tributaries. The two streams were identified in previous studies as consistently having some of the highest indicator-bacteria concentrations among New River Gorge tributaries. This study used the best available commercial methods for identifying and enumerating pathogens. However, these methods were developed for regular monitoring at water-treatment facilities or documenting the causes of disease outbreaks, and provided ambiguous results when used in this occurrence study. The World Health Organization suggests a study design for monitoring recreational waters. Frequent sampling for multiple fecal indicator organisms is the recommended first step. Regression modeling that uses environmental characteristics measurable in real time to predict bacteria concentrations and make operational decisions is recommended for contaminated waters.

West Virginia↗
USGS2003

African dust carries microbes across the ocean: are they affecting human and ecosystem health?

Atmospheric transport of dust from northwest Africa to the western Atlantic Ocean region may be responsible for a number of environmental hazards, including the demise of Caribbean corals; red tides; amphibian diseases; increased occurrence of asthma in humans; and oxygen depletion (eutrophication) in estuaries. Studies of satellite images suggest that hundreds of millions of tons of dust are trans-ported annually at relatively low altitudes across the Atlantic Ocean to the Caribbean Sea and southeastern United States. The dust emanates from the expanding Sahara/Sahel desert region in Africa and carries a wide variety of bacteria and fungi. The U.S. Geological Survey, in collaboration with the NASA/Goddard Spaceflight Center, is conducting a study to identify microbes--bacteria, fungi, viruses--transported across the Atlantic in African soil dust. Each year, millions of tons of desert dust blow off the west African coast and ride the trade winds across the ocean, affecting the entire Caribbean basin, as well as the southeastern United States. Of the dust reaching the U.S., Florida receives about 50 percent, while the rest may range as far north as Maine or as far west as Colorado. The dust storms can be tracked by satellite and take about one week to cross the Atlantic.

Open-File Report↗
USGS2003

Mineral Commodity Profiles -- Rubidium

Overview -- Rubidium is a soft, ductile, silvery-white metal that melts at 39.3 ?C. One of the alkali metals, it is positioned in group 1 (or IA) of the periodic table between potassium and cesium. Naturally occurring rubidium is slightly radioactive. Rubidium is an extremely reactive metal--it ignites spontaneously in the presence of air and decomposes water explosively, igniting the liberated hydrogen. Because of its reactivity, the metal and several of its compounds are hazardous materials, and must be stored and transported in isolation from possible reactants. Although rubidium is more abundant in the earth?s crust than copper, lead, or zinc, it forms no minerals of its own, and is, or has been, produced in small quantities as a byproduct of the processing of cesium and lithium ores taken from a few small deposits in Canada, Namibia, and Zambia. In the United States, the metal and its compounds are produced from imported raw materials by at least one company, the Cabot Corporation (Cabot, 2003). Rubidium is used interchangeably or together with cesium in many uses. Its principal application is in specialty glasses used in fiber optic telecommunication systems. Rubidium?s photoemissive properties have led to its use in night-vision devices, photoelectric cells, and photomultiplier tubes. It has several uses in medical science, such as in positron emission tomographic (PET) imaging, the treatment of epilepsy, and the ultracentrifugal separation of nucleic acids and viruses. A dozen or more other uses are known, which include use as a cocatalyst for several organic reactions and in frequency reference oscillators for telecommunications network synchronization. The market for rubidium is extremely small, amounting to 1 to 2 metric tons per year (t/yr) in the United States. World resources are vast compared with demand.

Open-File Report↗
USGS2005

Concentrations of Insecticides in Selected Surface Water Bodies in Suffolk County, New York, Before and After Mosquito Spraying, 2002-04

Concentrations of insecticides sprayed from truck or helicopter onto selected surface-water bodies in Suffolk County, N.Y., during the summers of 2002-04 decreased to below detection limits within 4 days after application. The U.S. Geological Survey (USGS), in cooperation with Suffolk County Department of Health Services (SCDHS), sampled surface waters from selected wetlands for insecticides that were sprayed seasonally from a truck or helicopter as part of the county’s West Nile Virus vector-control program. A total of 72 samples were collected from 27 sites and analyzed for 6 compunds—malathion, methoprene, methoprene acid, piperonyl butoxide (PBO), resmethrin, and sumithrin—that are typically used to help control mosquitoes. PBO was the most frequently detected analyte (33.3%), followed by resmethrin (11.1%), methoprene (9.7%), and methoprene acid (2.4%). Sumithrin and malathion were not applied and were not detected in any of the samples. Maximum recorded concentration of compounds in surface water were: PBO (59,800 ng/L), methoprene (9,030 ng/L), methoprene acid (1,710 ng/L), and resmethrin (293 ng/L). PBO and resmethrin were detected more often in samples when the compounds were applied by a helicopter rather than a truck. This report describes the 27 sampled locations, the sampling methods, and presents the initial results of the study. Detail is provided about concentrations of the applied compounds with respect to time as well as comparisons between the two application processes (truck versus helicopter). All data collected are presented in a table.

New York↗
USGS2015

Seasonal microbial and environmental parameters at Crocker Reef, Florida Keys, 2014–2015

Crocker Reef, located on the outer reef tract of the Florida Keys (fig. 1), was the site of an integrated “reefscape characterization” effort focused on calcification and related biogeochemical processes as part of the U.S. Geological Survey (USGS) C oral R eef E cosystem ST udies (CREST) project. It is characterized as a senile or dead reef, with only scattered stony coral colonies and areas of sand and rubble. It was chosen as an end-member for later comparison to sites with a healthy, growing reef framework. The CREST reefscape characterization included two intensive seasonal sampling trips to capture summer (July 8–17, 2014) and winter (January 29–February 5, 2015) conditions. This report presents water column microbial and environmental data collected for use as metadata in future publications examining reef metabolic processes via metagenomes derived from water samples and fine-scale temporal and spatial carbonate chemistry measurements. Microbial measurements included enumeration of total bacteria, enumeration of virus-like particles, and plate counts of Vibrio spp. colony-forming units (CFU). These measurements were intended to give a sense of any seasonal changes in the total microbial load and to provide an indication of water quality. Additional environmental parameters measured included water temperature, salinity, dissolved oxygen, and pH. Four sites (table 1) were intensively sampled for periods of approximately 48 hours during summer (July 2014) and winter (January–February 2015), during which water samples were collected every 4 hours for analysis, except when prevented by weather conditions.

Florida↗
USGS2023

Monitoring Avian Productivity and Survivorship (MAPS) 6-year summary, Naval Outlying Landing Field, Imperial Beach, southwestern San Diego County, California, 2014–20

Executive Summary From 2014 to 2020, a Monitoring Avian Productivity and Survivorship (MAPS) banding station (station) was operated at the Naval Outlying Landing Field (NOLF), Imperial Beach, in southwestern San Diego County, California. The station was established as part of a long-term monitoring program of Neotropical migratory bird populations on NOLF and helps Naval Base Coronado (NOLF is a component) meet the goals and objectives of the Department of Defense Partners in Flight program and the Birds and Migratory Birds Management Strategies of the Naval Base Coronado Integrated Natural Resources Management Plan. The station was established in 2009 and has been in operation during the spring and summer since 2009 except for 2016 when it was not funded. The station was operated by AMEC Earth and Environmental, Inc., from 2009 to 2011, by the U.S. Geological Survey from 2012 to 2015, the San Diego Natural History Museum in 2017, and the U.S. Geological Survey again from 2018 to 2023. This report synthesizes results from 2014 to 2020. A prior report presents summaries and analyses from 2009 to 2013. The banding station at NOLF was operated according to the standard MAPS protocol with some exceptions. Ten mist nets used to capture birds were erected in fixed locations that remained consistent between and within years, with few minor relocations. Nets were open for 6 hours per day, once every 10 days (a netting period) for 13 netting periods starting April 1 each year. Occasionally, poor weather conditions (for example, rain, wind, or excessive heat) prevented net operation or forced nets to be closed early (or, rarely, late). Nets were checked periodically throughout the day and birds were removed, processed (leg bands affixed, measurements recorded), and released. From 2014 to 2020, we had 3,543 captures (including initial captures and recaptures) of a maximum of 3,264 year-unique captures (543±143 year-unique captures [the total number of individual birds captured for the first time each year]). The count of year-unique captures included 2,702 newly banded birds, 258 individuals that were recaptured from previous years, and 304 birds that were released unbanded (218 hummingbirds and 86 other birds that were intentionally released unbanded [game birds, and so forth] or escaped before banding). Individuals of 68 species were captured, 39 of which breed at or in the immediate vicinity of the MAPS banding station. Bird capture rate averaged 43±30 captures per day (corrected to account for variation in effort) for all years (range 7–163 effort-corrected captures per day) and species richness per year averaged 43±4. Bushtit ( Psaltriparus minimus ) was the most abundant species captured, followed by Orange-crowned Warbler ( Leiothlypis celata ), Wilson’s Warbler ( Cardellina pusilla ), House Finch ( Haemorhous mexicanus ), Song Sparrow ( Melospiza melodia ), and Common Yellowthroat ( Geothlypis trichas ). The mean adult sex ratio of all species combined across all years was 54:46 male:female. Adults averaged 73±12 percent of known age captures per year (range 59–94 percent), and juveniles averaged 27±12 percent (range 6–41 percent). Nineteen sensitive species were detected at NOLF (12 captured and 7 observed only). During 2014–20, we captured one State and federally endangered species, Least Bell’s Vireo ( Vireo bellii pusillus ); one federally threatened species, California Gnatcatcher ( Polioptila californica ); one State endangered species, Willow Flycatcher ( Empidonax traillii ); and two State species of concern, Yellow-breasted Chat ( Icteria virens ) and Yellow Warbler ( Setophaga petechia ). One additional State species of concern, Northern Harrier ( Circus hudsonius ), was observed at the MAPS banding station but not captured. Peregrine Falcon ( Falco peregrinus ) and White-tailed Kite ( Elanus leucurus ), California State fully protected species, also were observed at the MAPS banding station. Seven federal bird species of conservation concern—Calliope Hummingbird ( Selasphorus calliope ), Rufous Hummingbird ( Selasphorus rufus ), Allen’s Hummingbird ( Selasphorus sasin ), Nuttall’s Woodpecker ( Dryobates nuttallii ), Wrentit ( Chamaea fasciata ), California Thrasher ( Toxostoma redivivum ), and Lawrence’s Goldfinch ( Spinus lawrencei )—also were captured, and four additional federal bird species of conservation concern—Willet ( Tringa semipalmata ), Western Gull ( Larus occidentalis ), California Gull ( Larus californicus ), and Bullock’s Oriole ( Icterus bullockii )—were observed but not captured. Local population trends varied among species and years. From 2012 to 2019, year-round residents Bushtit, Song Sparrow, and Common Yellowthroat significantly decreased, whereas the migrant Least Bell’s Vireo increased. The total number of captures for all species except Least Bell’s Vireo was lowest in 2017, corresponding to the habitat damage caused by Kuroshio shot hole borer beetle ( Euwallacea kuroshio ) in the Tijuana River Valley. Annual productivity and annual adult survival were calculated for seven breeding species based on criteria used by the Institute for Bird Populations (Least Bell’s Vireo, Bushtit, Wrentit, House Wren [ Troglodytes aedon ], Song Sparrow, Orange-crowned Warbler, and Common Yellowthroat). Productivity was highest for most species in 2010 and 2019, years with high precipitation, and lowest in 2014 and 2018, years with low precipitation. Song Sparrow demonstrated the highest productivity among species and Least Bell’s Vireo had the lowest productivity. Annual adult survival was generally high from 2011 to 2012 and from 2018 to 2019. Bushtit had higher annual survival with lower late winter precipitation. Either temperature or precipitation was associated with productivity for all species except Wrentit, and with survival for all species except Least Bell’s Vireo and Common Yellowthroat. For most species, productivity was positively associated with precipitation, and both productivity and survival were negatively associated with temperature. Other studies have found that higher temperatures led to increased predation by snakes and birds and also increased vector-borne disease transmission, such as West Nile virus. Predicted regional increases in temperature over the next 30 years will likely affect the demographics of these species. The Song Sparrow population increased with higher breeding productivity during the previous year, and the Bushtit population increased with higher annual survival and higher productivity during the previous year. Aside from a possible positive association between survivorship and Common Yellowthroat population growth, productivity and survival rates did not appear to influence population change for other focal species.

California↗
USGS2025

Reconnaissance of potential alternate water supply sources for the City of Gary, West Virginia

Seven potential sources of water, consisting of free-flowing discharge from abandoned coal mines at six locations and one abandoned flooded underground coal mine air shaft, were sampled for chemical analysis to assess the quality of the groundwater emanating from the seven mine sources. The six free-flowing mine discharge sources were also assessed for discharge by current-meter measurements on two separate occasions. The U.S. Geological Survey assessed these seven sources to provide information to the City of Gary, West Virginia (W. Va.), and the City of Gary’s consulting engineer with groundwater-quality and flow data to allow them to assess the seven sites as potential alternate sources of water for the City of Gary to augment its existing supply. For the six sites where discharge could be measured, discharge ranged from a minimum of 0.082 cubic feet per second (ft 3 /s) to a maximum of 3.685 ft 3 /s. Of the six sites measured, only two, Harmon Branch at Thorpe, W. Va. (USGS site 372201081303501) and the abandoned public-supply water wells near Havaco, W. Va. (USGS site 372358081344601), had discharge in excess of 1.00 ft 3 /s. Discharge from the abandoned public supply wells was 3.685 ft 3 /s on September 20, 2023, and 2.888 ft 3 /s on October 16, 2023, and discharge from Harmon Branch at Thorpe, W. Va., was 1.049 ft 3 /s on September 22, 2023, and 1.038 ft 3 /s on October 17, 2023. Discharge in the abandoned underground mine air shaft (USGS site 372224081340901) could not be assessed, but the air shaft drains an abandoned mine that likely contains water stored in approximately 1.7 square miles (mi 2 ) of abandoned underground coal mines in the Pocahontas No. 3 coal seam, and possibly an additional 0.9 mi 2 of leakage from the overlying Pocahontas No. 4 coal seam. Discharge for the six sites measured for the study was measured during a period between September 20 and October 18, 2023, and corresponded to the 12th to the 15th percentile of flow-duration statistics for the Tug Fork downstream of Elkhorn Creek at Welch, W. Va. streamgage (USGS site 03212750). Water-quality data for the seven sites sampled overall were acceptable with respect to drinking water standards. Of the 203 constituents analyzed, only a few failed to meet applicable U.S. Environmental Protection Agency (EPA) drinking water standards. Iron exceeded the 300 micrograms per liter (μg/L) secondary maximum contaminant level (SMCL) at only 1 of the 7 sites (14.3 percent) sampled. Iron concentrations ranged from a minimum of less than (<) 5.00 μg/L to a maximum of 724 μg/L with a median concentration of 7.62 μg/L. Manganese exceeded the 50.0 μg/L SMCL at 2 of the 7 sites (28.6 percent) sampled. Manganese concentrations ranged from a minimum of 1.93 μg/L to a maximum of 271 μg/L with a median concentration of 4.03 μg/L. No sites sampled exceeded the arsenic maximum contaminant level (MCL) of 10 μg/L. Arsenic concentrations ranged from a minimum of <0.100 μg/L to a maximum of 2.35 μg/L with a median arsenic concentration of 0.200 μg/L. None of the seven sites sampled for selenium for this study exceeded the EPA MCL of 50.0 μg/L. Selenium concentrations ranged from a minimum of <0.050 μg/L to a maximum of 5.26 μg/L with a median concentration of 3.21 μg/L. All seven sites were sampled for volatile organic compounds (VOCs), semivolatile organic compounds (SVOCs), and polychlorinated biphenyls (PCBs), but most had concentrations below the detection limit. Of the 10 PCB compounds analyzed for the seven sites sampled, none contained detectable concentrations of PCBs or Aroclor compounds. Of the 44 SVOCs analyzed at each of the seven sites sampled, only 1 SVOC, acenaphthene, was detected, at a concentration of 0.02 μg/L. Of the 96 VOCs analyzed, from each of the seven sites sampled, only two were found at detectable concentrations. Trichloromethane was detected only at 1 of the 7 (14.3 percent) sites sampled at a concentration of 0.027 μg/L, and benzene was detected at the same site and 3 additional sites (4 of the 7 sites or 57.1 percent of the sites sampled) at concentrations of 0.028, 0.029, 0.021, and 0.035 μg/L, but none exceeded the EPA MCL for benzene of 5.00 μg/L. Total coliform bacteria are ubiquitous in the environment, and their presence only suggests the potential for contamination by near-surface processes. Escherichia coli ( E. coli ) bacteria are derived from either human or animal fecal material and can be an indicator of potential contamination by pathogenic bacteria or viruses. Total coliform bacteria were detected at all 7 sites sampled at concentrations ranging from 17.5 to greater than (>) 2,420 most probable number per 100 mL (MPN/100 mL) of sample, with a median total coliform concentration of 1,553 MPN/100 mL. Escherichia coli bacteria were detected at 4 of the 7 sites sampled at concentrations ranging from <1 to 11.9 MPN/100 mL, with a median E. coli concentration of 5.1 MPN/100 mL.

West Virginia↗
USGS1980

Microorganisms in stormwater; a summary of recent investigations

All storm runoff contains a variety of bacteria, including total coliform, fecal coliform, and fecal streptococci, which are derived from the land over which the water flows. Most total coliform are native soil organisms, whereas the fecal coliform and fecal streptococci originate from the feces of wild and domestic animals. Urban runoff has been reported to contain pathogenic organisms, but this probably presents little direct threat to human health because the runoff is not ingested. Runoff water can, however, have other negative effects such as contamination of surface water, which may result in beach closures, or contamination of shellfish. This type of contamination is generally of short duration because indicator bacteria and pathogens die out rapidly in the aquatic environment. Similarly, bacteria and viruses deposited on soil by stormwater are inactivated by drying, competition from soil microflora, and a variety of other processes. Every storm producing runoff is unique in the number and type of microorganisms because these vary from site to site, from storm to storm, and during the course of the storm. Stormwater to be examined for microorganisms must be collected in sterile containers and processed immediately. (USGS)

Open-File Report↗
USGS2005

Organic wastewater compounds, pharmaceuticals, and coliphage in ground water receiving discharge from onsite wastewater treatment systems near La Pine, Oregon: Occurrence and implications for transport

The occurrence of organic wastewater compounds (components of 'personal care products' and other common household chemicals), pharmaceuticals (human prescription and nonprescription medical drugs), and coliphage (viruses that infect coliform bacteria, and found in high concentrations in municipal wastewater) in onsite wastewater (septic tank effluent) and in a shallow, unconfined, sandy aquifer that serves as the primary source of drinking water for most residents near La Pine, Oregon, was documented. Samples from two types of observation networks provided basic occurrence data for onsite wastewater and downgradient ground water. One observation network was a group of 28 traditional and innovative (advanced treatment) onsite wastewater treatment systems and associated downgradient drainfield monitoring wells, referred to as the 'innovative systems network'. The drainfield monitoring wells were located adjacent to or under onsite wastewater treatment system drainfield lines. Another observation network, termed the 'transect network', consisted of 31 wells distributed among three transects of temporary, stainless-steel-screened, direct-push monitoring wells installed along three plumes of onsite wastewater. The transect network, by virtue of its design, also provided a basis for increased understanding of the transport of analytes in natural systems. Coliphage were frequently detected in onsite wastewater. Coliphage concentrations in onsite wastewater were highly variable, ranging from less than 1 to 3,000,000 plaque forming units per 100 milliliters. Coliphage were occasionally detected (eight occurrences) at low concentrations in samples from wells located downgradient from onsite wastewater treatment system drainfield lines. However, coliphage concentrations were below method detection limits in replicate or repeat samples collected from the eight sites. The consistent absence of coliphage detections in the replicate or repeat samples is interpreted to indicate that the detections reported for ground-water samples represented low-level field or laboratory contamination, and it would appear that coliphage were effectively attenuated to less than 1 PFU/100 mL over distances of several feet of transport in the La Pine aquifer and (or) overlying unsaturated zone. Organic wastewater compounds were frequently detected in onsite wastewater. Of the 63 organic wastewater compounds in the analytical schedule, 45 were detected in the 21 samples of onsite wastewater. Concentrations of organic wastewater compounds reached a maximum of 1,300 ug/L (p-cresol). Caffeine was detected at concentrations as high as 320 ug/L. Fourteen of the 45 compounds were detected in more than 90 percent of onsite wastewater samples. Fewer (nine) organic wastewater compounds were detected in ground water, despite the presence of nitrate and chloride likely from onsite wastewater sources. The nine organic wastewater compounds that were detected in ground-water samples were acetyl-hexamethyl-tetrahydro-naphthalene (AHTN), caffeine, cholesterol, hexahydrohexamethyl-cyclopentabenzopyran, N,N-diethyl-meta-toluamide (DEET), tetrachloroethene, tris (2-chloroethyl) phosphate, tris (dichloroisopropyl) phosphate, and tributyl phosphate. Frequent detection of household-chemical type organic wastewater compounds in onsite wastewater provides evidence that some of these organic wastewater compounds may be useful indicators of human waste effluent dispersal in some hydrologic environments. The occurrence of organic wastewater compounds in ground water downgradient from onsite wastewater treatment systems demonstrates that a subgroup of organic wastewater compounds is transported in the La Pine aquifer. The consistently low concentrations (generally less than 1 ug/L) of organic wastewater compounds in water samples collected from wells located no more than 19 feet from drainfield lines indicates that the reactivity (sorption, degradation) of this suite of organic waste.

Oregon↗
USGS2013

American white pelicans breeding in the northern plains: productivity, behavior, movements, and migration

Nearly half of American white pelicans (Pelecanus erythrorhynchos; hereafter pelicans) are believed to nest in several large colonies in the northern plains, yet few studies had been conducted on pelicans in this region until research began in 2004 to investigate the impact of West Nile virus (WNV) on their chicks. The work reported here focused on two of the largest colonies in the region, at Bitter Lake, South Dakota, and Chase Lake, North Dakota, during 2005–10. Pelicans usually began arriving at these two breeding colonies in early April. Egg-laying began during mid-April and nest initiations continued through May. The number of nests documented at these colonies reached a high of about 15,400 at Bitter Lake and 17,300 at Chase Lake, both in 2006. During 2006–8, annual variation in hatching success was high (40 to 100 percent) at video-monitored nests, averaging 61 percent for 82 nests at Bitter Lake and 57 percent for 88 nests at Chase Lake. Although most nests contained two eggs, of those where two chicks hatched, both chicks survived to the crèche stage (about 15 days old) at only two nests. Severe weather events, disturbance, and siblicide were documented causes of early season (before mid-July) mortalities. In the late season (mid-July to fledging), WNV was the most important factor contributing to chick mortality. Nests were nearly always attended by one adult during incubation and brooding. Adults typically exchanged places at the nest around mid-day in all 3 years, apparently taking advantage of thermals to gain altitude for travel to and from foraging areas. The mean time of exchange differed by about an hour between Bitter Lake (1328 central standard time, CST) and Chase Lake (1434 CST) colonies. During incubation, nearly 3 days often passed between adult nest exchanges; after chicks hatched, exchanges usually occurred daily. Exchanges were more frequent and chicks were fed more often at successful nests than at failed nests. Adult pelicans with satellite transmitters that incorporated a Global Positioning System (GPS) foraged primarily in shallow areas of lakes and semipermanent wetlands. These areas coincide with typical habitats of crayfish, salamanders, and rough fish, which were also the foods most commonly seen in pelican regurgitates at the colonies. Several satellite-tracked pelicans made frequent round trips between their breeding colony and foraging areas, most likely to provision their chicks. Typical distances travelled to foraging sites ranged from 30 kilometers to over 90 kilometers. Return times to the colonies (about 1300 and 1500 CST at Bitter Lake and Chase Lake, respectively) supported the colony difference documented at video-monitored nests. Of 28 pelicans tagged with GPS satellite transmitters in 2005–6, 26 survived the first summer and migrated south during fall. Nineteen of these returned to the breeding region (defined as north of the latitude of South Dakota’s southern border) in at least 1 year during 2006–9; collectively, they returned to the breeding region 33 times. Very few pelicans returned to the colony where they had been tagged; many did not breed and concentrated their activities at wetland complexes in South Dakota and North Dakota, but few tagged pelicans temporally overlapped at specific sites. During 2005–9, tagged pelicans collectively made 56 migratory trips south in the fall. Most wintered in Mexico, near the gulf coast and elsewhere; others wintered in Texas, Louisiana, Mississippi, and Florida. Individuals typically returned to the same general areas each winter. Individuals rarely followed the same migratory path on their way south and north, but they often roughly repeated southerly or northerly routes among years. Ensuring a sustainable population of American white pelicans requires identification and mitigation of known threats. The work described herein has identified WNV and severe weather as important factors that potentially limit reproductive success and recruitment in the northern plains. Managers in this region could assess the influence of such factors on productivity at key colonies by annually obtaining aerial photographs during peak nesting, and estimating numbers of chicks fledged from aerial photographs or ground counts. Banding a subsample of chicks in late June or early July, followed by a sweep for bands at the end of the season, would allow estimation of mortality rates of older chicks (that normally would fledge) and help track the influence of WNV or other mortality factors over time and varying environmental conditions.

North Dakota;South Dakota↗
USGS2014

Water quality and sources of fecal coliform bacteria in the Meduxnekeag River, Houlton, Maine

In response to bacterial contamination in the Meduxnekeag River and the desire to manage the watershed to reduce contaminant sources, the Houlton Band of Maliseet Indians (HBMI) and the U.S. Geological Survey began a cooperative effort to establish a baseline of water-quality data that can be used in future studies and to indicate potential sources of nutrient and bacterial contamination. This study was conducted during the summer of 2005 in the Meduxnekeag River Basin near Houlton, Maine. Continuously recorded specific conductance can be a good indicator for water quality. Specific conductance increased downstream from the town of Houlton, between runoff events, and decreased sharply following major runoff events. Collections of discrete samples during the summer of 2005 indicated seasonal positive concentration-discharge relations for total phosphorus and total nitrogen; these results indicate that storm runoff may mobilize and transport these nutrients from the terrestrial environment to the river. Data collected by the HBMI on fecal coliform bacteria indicated that bacterial contamination enters the Meduxnekeag River from multiple paths including tributaries and surface drains (ditches) in developed areas in Houlton, Maine. The Houlton wastewater treatment discharge was not an important source of bacterial contamination. Bacteroidales-based tests for general fecal contamination (Bac32 marker) were predominantly positive in samples that had excessive fecal contamination as indicated by Enterococci density greater than 104 colony-forming units per 100 millilters. Of the 22 samples tested for Bacteroidales-based markers of human-associated fecal contamination (HF134 and HF183), 8 were positive. Of the 22 samples tested for Bacteroidales-based markers of ruminant-associated fecal contamination (CF128 and CF193), 7 were positive. Human fecal contamination was detected consistently at two sites (surface drains in urban areas in the town of Houlton) and occasionally detected at one site (Moose Brook) but was not detected at other sites. Fecal contamination (as indicated by fecal coliform density) apparently is localized under normal flow conditions with the highest levels restricted to drains in urban areas and to a lesser extent B Stream, Pearce Brook, and Big Brook, all tributaries to the main stem of the Meduxnekeag River. Coliphage were enumerated as an alternate indicator of fecal contamination with the intent of typing the virus into host-associated classes (human or ruminant), as was done for Enterococci; however, insufficient coliphage were isolated to provide more than preliminary indications. In spite of low coliphage enumeration, the preliminary results strengthen the conclusion that the Enterococci data correctly indicated the samples that contained human and ruminant fecal contamination. The finding that contamination was in many of the tributaries following storms in mid-July indicates that storm runoff likely carries fecal contaminants to more locations than runoff under lower flow conditions.

Maine↗
USGS2022

Groundwater quality and geochemistry of the western wet gas part of the Marcellus Shale Oil and Gas Play in West Virginia

Thirty rural residential water wells in the wet gas region of the Marcellus Shale oil and gas play in northwestern West Virginia were sampled by the U.S. Geological Survey (USGS) in 2018, in cooperation with West Virginia State agencies, to analyze for a range of water-quality constituents, including major ions, trace metals, radionuclides, bacteria, and methane and other dissolved hydrocarbon gases. The groundwater-quality data collected for this study were used to assess the overall quality of groundwater in the study area in relation to public drinking-water standards. The groundwater-quality data were also evaluated with respect to geology, well depth, topographic setting, and proximity to oil and gas wells to identify possible relations to these factors. The presence of total coliform bacteria in groundwater is a potential indicator of surface contamination. The presence of Escherichia coli bacteria is indicative of fecal contamination of groundwater from either human or animal sources and may be considered an indicator of other related pathogens such as viruses. Total coliforms were detected in 26 of the 30 (87 percent) wells sampled. Eleven of the 30 (37 percent) wells sampled had detections of Escherichia coli bacteria. Sodium concentrations in 24 of 30 (80 percent) samples exceeded the U.S. Environmental Protection Agency (EPA) 20-milligram per Liter (mg/L) health-based value (HBV). Manganese, aluminum, and iron concentrations exceeded the EPA 50, 2.0, and 300 micrograms per liter (μg/L) secondary maximum contaminant level (SMCL) drinking-water standards at 14 (47 percent), 7 (23 percent), and 5 (17 percent) of the 30 wells sampled. Two of the 30 (7 percent) wells sampled had concentrations of manganese that exceeded the 300-μg/L USGS health-based screening level (HBSL). Arsenic concentrations at 7 of 30 (23 percent) wells sampled exceeded the 10-μg/L EPA maximum contaminant level (MCL) health-based drinking water standard. The EPA maximum contaminant level goal (MCLG) for arsenic is 0 μg/L and 29 of 30 wells sampled contained detectable concentrations of arsenic. None of the 30 wells sampled exceeded the U.S. Office of Surface Mining Reclamation and Enforcement (OSMRE) 28-mg/L immediate action level (IAL) for methane in groundwater and only 1 of 30 (3 percent) sites exceeded the 10-mg/L OSMRE level of concern (LOC) for methane in groundwater. Of the 28 wells sampled for radon-222 all 28 (100 percent) exceeded the EPA proposed 300-picocuries per liter (pCi/L) MCL for radon. None of the samples exceeded the 4,000-pCi/L alternate maximum contaminant level (AMCL) which is applicable to public drinking water systems that have adopted radon mitigation programs. Wilcoxon Signed Rank Tests indicated statistically significant differences at a 95 percent confidence interval (p less than 0.05) in radium-226, barium, and ethane groundwater concentrations with respect to the density of oil and gas wells present within a 500-meter (m) radius around the rural residential wells sampled for the study. Samples from residential wells that had four or fewer oil and gas wells in the surrounding 500-m radius had statistically lower concentrations of radium-226, bromide, and ethane than samples from residential wells sampled that had five or more oil and gas wells in the surrounding 500-m radius. Given the available data, the relationship between concentrations of radium-226, bromide, and ethane for wells sampled in this study and oil and gas development or natural geochemical processes is not clear. Groundwater-age tracers (chlorofluorocarbons, tritium, and sulfur hexafluoride) were sampled at 17 of the 30 wells. All 17 samples contained a fraction of young, post-1950s groundwater. Many of the groundwater samples collected for this study have high calcium to sodium ratios and low total dissolved solids concentrations, indicating they are dominated by recently recharged water. A subset of samples had chloride to bromide mass ratios between 70 and 200, indicating that deep Appalachian basin brines mixed with the shallow groundwater. For most of the samples in this study, the C 1 through C 6 hydrocarbons have characteristics that reflect a biogenic gas signature that has, to varying degrees, undergone oxidation processes during transport. None of the samples show a characteristic thermogenic cracking pattern among the hydrocarbon ratios.

West Virginia↗
USGS2008

Chapter A7 Biological Indicators

The National Field Manual for the Collection of Water-Quality Data (National Field Manual) provides guidelines and standard procedures for U.S. Geological Survey (USGS) personnel who collect data used to assess the quality of the Nation's surface-water and ground-water resources. This chapter of the manual includes procedures for the (1) determination of biochemical oxygen demand using a 5-day bioassay test; (2) collection, identification, and enumeration of fecal indicator bacteria; (3) collection of samples and information on two laboratory methods for fecal indicator viruses (coliphages); and (4) collection of samples for protozoan pathogens. Each chapter of the National Field Manual is published separately and revised periodically. Newly published and revised chapters will be announced on the USGS Home Page on the World Wide Web under 'New Publications of the U.S. Geological Survey.'

Techniques of Water-Resources Investigations↗
USGS2000

Microbiological monitoring for the U.S. Geological Survey National Water-Quality Assessment Program

Data to characterize the microbiological quality of the Nation's fresh, marine, and estuarine waters are usually collected for local purposes, most often to judge compliance with standards for protection of public health in swimmable or drinkable waters. Methods and procedures vary with the objectives and practices of the parties collecting data and are continuously being developed or modified. Therefore, it is difficult to provide a nationally consistent picture of the microbial quality of the Nation's waters. Study objectives and guidelines for a national microbiological monitoring program are outlined in this report, using the framework of the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) program. A national program is designed to provide long-term data on the presence of microbiological pathogens and indicators in ground water and surface water to support effective water policy and management. Three major groups of waterborne pathogens affect the public health acceptability of waters in the United States—bacteria, protozoa, and viruses. Microbiological monitoring in NAWQA would be designed to assess the occurrence, distribution, and trends of pathogenic organisms and indicators in surface waters and ground waters; relate the patterns discerned to factors that help explain them; and improve our understanding of the processes that control microbiological water quality.

Water-Resources Investigations Report↗
USGS2002

Ground-water quality and discharge to Chincoteague and Sinepuxent Bays adjacent to Assateague Island National Seashore, Maryland

The U.S. Geological Survey, in cooperation with the Maryland Department of the Environment and the Wisconsin State Laboratory of Hygiene, conducted a study to characterize the occurrence and distribution of viral contamination in small (withdrawing less than 10,000 gallons per day) public water-supply wells screened in the shallow aquifer in the Piedmont Physiographic Province in Baltimore and Harford Counties, Maryland. Two hundred sixty-three small public water-supply wells were in operation in these counties during the spring of 2000. Ninety-one of these sites were selected for sampling using a methodology that distributed the samples evenly over the population and the spatial extent of the study area. Each site, and its potential susceptibility to microbiological contamination, was evaluated with regard to hole depth, casing interval, and open interval. Each site was evaluated using characteristics such as on-site geology and on-site land use.Samples were collected by pumping between 200 and 400 gallons of untreated well water through an electropositive cartridge filter. Water concentrates were subjected to cell-culture assay for the detection of culturable viruses and reverse-transcription polymerase chain reaction/gene probe assays to detect viral ribonucleic acid; grab samples were analyzed for somatic and male-specific coliphages, Bacteroides fragilis, Clostridium perfringens, enterococci, Escherichia coli, total coliforms, total oxidized nitrogen, nitrite, organic nitrogen, total phosphate, ortho-phosphate, calcium, magnesium, sodium, potas-sium, chloride, sulfate, iron, acid-neutralizing capacity, pH, specific conductance, temperature, and dissolved oxygen.One sample tested positive for the presence of the ribonucleic acid of rotavirus through poly-merase chain-reaction analysis. Twenty-nine per-cent of the samples (26 of 90) had bacterial con-tamination. About 7 percent of the samples (6 of 90) were contaminated with either male-specific coliphage, somatic coliphage, or bacteriophages of Bacteroides fragilis. About 3 percent of the sam-ples (3 of 87) had oxidized nitrogen concentra-tions that exceeded the U.S. Environmental Protection Agency?s Maximum Contaminant Level of 10.0 milligrams per liter. A statistical analysis showed that no significant relation exists between the presence of bacteria or coliphage and all variables, except the mean temperature of the water sample as measured in the field. Additionally, the concentration of total coliform bacteria had a statistically significant, moderately strong cor-relation with the concentration of sulfate and sample pH as measured at the U.S. Geological Survey National Water-Quality Laboratory in Denver, Colorado.

Water-Resources Investigations Report↗
USGS2002

Ground-Water Resource Assessment in the Rio Grande de Manati Alluvial Plain, Rio Arriba Saliente Area, Puerto Rico

The alluvial aquifer within a 160-acre area of the Rio Grande de Manati alluvial plain was investigated to evaluate its potential as a water-supply source for the Barrios Rio Arriba Saliente and Pugnado Afuera, municipio of Manati, Puerto Rico. Analysis of well boring samples and the results of electric resistivity surveys indicate that the average thickness of the unconsolidated alluvial deposits in the study area is about 100 to 110 feet. The alluvium is a mixture of sand and gravel, which generally has a porosity of 0.2 to 0.35. Short-duration pump tests in small-diameter piezometers indicate that the alluvial aquifer has a hydraulic conductivity of about 200 feet per day and a transmissivity of about 7,900 feet squared per day. Analyses of water levels in piezometers, combined with stage measurements at a series of surveyed reference points along the Rio Grande de Manati channel, indicate that the water-table gradient in the alluvial aquifer is about 0.001, and that ground-water flow is generally from south to north, in the general direction of river flow. The water-table data indicate that the Rio Grande de Manati is the principal source of ground-water recharge to the alluvial aquifer in the study area. Because base flow for the Rio Grande de Manati is usually greater than 44 cubic feet per second, a continuous withdrawal rate of 0.5 to 1.0 cubic foot per second (225 to 450 gallons per minute) from a production well is possible. Chemical analysis of a ground-water sample indicates that the alluvial aquifer water meets U.S. Environmental Protection Agency secondary standards for selected constituents. Bacteriological analysis of ground-water samples indicates that the ground water contains little or no fecal coliform or fecal streptococcus bacteria. Although long-term data from upstream of the study area indicate high levels of fecal coliform and fecal streptococcus prior to 1996, bacteriological analyses of Rio Grande de Manati water samples obtained during the present study indicate that fecal coliform and fecal streptococcus concentrations are within the standards for surface water intended for use (or with the potential for use) as a raw source of public water supply in Puerto Rico. If a production well were constructed in the study area, it would be located close to the river channel (within 500 to 800 feet). Pumping from the porous and permeable alluvial aquifer close to the river channel could substantially enhance recharge from the Rio Grande de Manati channel to the aquifer. Enhanced recharge could shorten travel times for ground water in the aquifer, which might not allow sufficient time to attenuate bacteria and viruses. Travel times for bacteria moving from the river channel to a hypothetical production well were estimated using the numerical transport model MODFLOW/MT3DMS with an uncalibrated model of the alluvial aquifer. The model assumes a well pumping at 1 cubic foot per second. The transport of particles from the river to the well is most sensitive to the porosity of the aquifer and the pumping rate of the well. Sensitivity analysis indicates that a decrease in pumpage will increase the time of travel for particles to move from the river to the pumping well. The model indicates that the leading edge of a plume would reach the production well in about 40 days assuming a porosity of 0.20, 60 days assuming a porosity of 0.275, and about 70 days assuming a porosity of 0.35. If the well were moved 50 feet further from the river, the leading edge of the plume would reach the well in about 50 days assuming a porosity of 0.20 and about 70 days assuming a porosity of 0.275. These estimates are considered worse case estimates because no decay rate was included in the simulation, and because the hypothetical well was located in the center of the alluvial plain rather than further eastward, away from the river channel.

Water-Resources Investigations Report↗
USGS2002

Hydrology and water quality near Bromide Pavilion in Chickasaw National Recreation Area, Murray County, Oklahoma, 2000

The Bromide Pavilion in Chickasaw National Recreation Area drew many thousands of people annually to drink the mineral-rich waters piped from nearby Bromide and Medicine Springs. Periodic detection of fecal coliform bacteria in water piped to the pavilion from the springs, low yields of the springs, or flooding by adjacent Rock Creek prompted National Park Service officials to discontinue piping of the springs to the pavilion in the 1970s. Park officials would like to resume piping mineralized spring water to the pavilion to restore it as a visitor attraction, but they are concerned about the ability of the springs to provide sufficient quantities of potable water. Pumping and sampling of Bromide and Medicine Springs and Rock Creek six times during 2000 indicate that these springs may not provide sufficient water for Bromide Pavilion to supply large numbers of visitors. A potential problem with piping water from Medicine Spring is the presence of an undercut, overhanging cliff composed of conglomerate, which may collapse. Evidence of intermittent inundation of the springs by Rock Creek and seepage of surface water into the spring vaults from the adjoining creek pose a threat of contamination of the springs. Escherichia coli, fecal coliform, and fecal streptococcal bacteria were detected in some samples from the springs, indicating possible fecal contamination. Cysts of Giardia lamblia and oocysts of Cryptosporidium parvum protozoa were not detected in the creek or the springs. Total culturable enteric viruses were detected in only one water sample taken from Rock Creek.

Oklahoma↗