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At least 1,027 records · Page 57Linked to original sources
USGS2010

Environmental drivers of fish functional diversity and composition in the Lower Colorado River Basin

Freshwater conservation efforts require an understanding of how natural and anthropogenic factors shape the present-day biogeography of native and non-native species. This knowledge need is especially acute for imperiled native fishes in the highly modified Lower Colorado River Basin (LCRB), USA. In the present study we employed both a taxonomic and functional approach to explore how natural and human-related environmental drivers shape landscape-scale patterns of fish community composition in the LCRB. Our results showed that hydrologic alteration, watershed land use, and regional climate explained 30.3% and 44.7% of the total variation in fish community taxonomic and functional composition, respectively. Watersheds with greater dam densities and upstream storage capacity supported higher non-native functional diversity, suggesting that dams have provided additional "niche opportunities" for non-native equilibrium life-history strategists by introducing new reservoir habitat and modifying downstream flow and thermal regimes. By contrast, watersheds characterized by greater upstream land protection, lower dam densities, and higher variation in spring and summer precipitation supported fish communities with a strong complement of native species (opportunistic-periodic strategists). In conclusion, our study highlights the utility of a life-history approach to better understand the patterns and processes by which fish communities vary along environmental gradients.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS1987

The geologic story of Yosemite National Park

Within 150 years, Yosemite has moved from great obscurity to worldwide fame as one of the most visited of our national parks. As a remarkable place where people can enjoy unparalleled scenes of natural beauty and where many easily observed geologic features are concentrated, the park is rivaled by few other areas on the planet. The majesty and immense variety of these features have inspired artists and photographers, intrigued tourists, and stirred controversy among geologists. Field studies in the Yosemite area have contributed to the development of our ideas about geologic processes, including the different actions of streams and glaciers in the evolution of the landscape, and the formation of granite, the basic bedrock of much of the Earth's continents. The park's role as a natural laboratory for geologic research cannot be overemphasized, and its investigation has led to many landmark studies by U.S. Geological Survey geologists over the past 70 years. In 1913, the first detailed program of research on the geology of the park and the origin ofYosemite Valley was begun by Francois Matthes and Frank Calkins. Their work, along with that of later generations of Survey geologists, myself included, serves as the basis for our present understanding of the geologic history of Yosemite and of the processes that formed and continue to mold its landscape. This book, which makes available in one volume a comprehensive summary of the current geologic knowledge of Yosemite National Park, is an excellent example of the Survey's continuing effort to provide earth-science information in the public service.

California↗
USGS1999

Distribution of benthic foraminifers (>125 um) in the surface sediments of the Arctic Ocean

Census data on benthic foraminifers (>125 ?m) in surface sediment samples from 49 box cores are used to define four depth-controlled biofacies, which will aid in the paleoceanographic reconstruction of the Arctic Ocean. The shelf biofacies contains a mix of shallow-water calcareous and agglutinated species from the continental shelves of the Beaufort and Chukchi Seas and reflects the variable sedimentologic and oceanic conditions of the Arctic shelves. The intermediate-depth calcareous biofacies, found between 500 and 1,100 meters water depth (mwd), contains abundant Cassidulina teretis , presumably indicating the influence of Atlantic-derived water at this depth. In water depths between 1,100 and 3,500 m, a deepwater calcareous biofacies contains abundant Oridorsalis umbonatus . Below 3,500 mwd, the deepwater mixed calcareous/agglutinated biofacies of the Canada, Makarov, and Eurasian Basins reflects a combination of low productivity, dissolution, and sediment transport. Two other benthic foraminiferal species show specific environmental preferences. Fontbotia wuellerstorfi has a depth distribution between 900 and 3,500 mwd, but maximum abundance occurs in the region of the Mendeleyev Ridge. The elevated abundance of F. wuellerstorfi may be related to increased food supply carried by a branch of Atlantic water that crosses the Lomonosov Ridge near the Russian Continental Shelf. Triloculina frigida is recognized to be a species preferring lower slope sediments commonly disturbed by turbidites and bottom currents. INTRODUCTION At present, our understanding of the Arctic Ocean lags behind our understanding of other oceans, and fundamental questions still exist about its role in and response to global climate change. The Arctic Ocean is particularly sensitive to climatic fluctuations because small changes in the amounts of sea-ice cover can alter global albedo and thermohaline circulation (Aagaard and Carmack, 1994). Numerous questions still exist regarding the nature and timing of paleoclimatic events in the Arctic Ocean. In order to attempt to answer some of these questions, baseline studies are imperative. This report discusses the distribution of benthic foraminifers in surface sediment samples from 49 box cores (figs. 1 and 2, table 1) collected by the U.S. Geological Survey (USGS) with the assistance of the U.S. Coast Guard (USCG). A modern data set of benthic foraminiferal distribution is necessary for interpreting the paleoclimatic and oceanographic history of the Arctic Ocean.

Bulletin↗
USGS2014

Growth and degradation of Hawaiian volcanoes

The 19 known shield volcanoes of the main Hawaiian Islands—15 now emergent, 3 submerged, and 1 newly born and still submarine—lie at the southeast end of a long-lived hot spot chain. As the Pacific Plate of the Earth’s lithosphere moves slowly northwestward over the Hawaiian hot spot, volcanoes are successively born above it, evolve as they drift away from it, and eventually die and subside beneath the ocean surface. The massive outpouring of lava flows from Hawaiian volcanoes weighs upon the oceanic crust, depressing it by as much as 5 km along an axial Hawaiian Moat. The periphery of subsidence is marked by the surrounding Hawaiian Arch. Subsidence is ongoing throughout almost all of a volcano’s life. During its active life, an idealized Hawaiian volcano passes through four eruptive stages: preshield, shield, postshield, and rejuvenated. Though imperfectly named, these stages match our understanding of the growth history and compositional variation of the Hawaiian volcanoes; the stages reflect variations in the amount and rate of heat supplied to the lithosphere as it overrides the hot spot. Principal growth occurs in the first 1–2 million years as each volcano rises from the sea floor or submarine flank of an adjacent volcano. Volcanic extinction ensues as a volcano moves away from the hot spot. Eruptive-stage boundaries are drawn somewhat arbitrarily because of their transitional nature. Preshield-stage lava is alkalic as a consequence of a nascent magma-transport system and less extensive melting at the periphery of the mantle plume fed by the hot spot. The shield stage is the most productive volcanically, and each Hawaiian volcano erupts an estimated 80–95 percent of its ultimate volume in tholeiitic lavas during this stage. Shield-stage volcanism marks the time when a volcano is near or above the hot spot and its magma supply system is robust. This most active stage may also be the peak time when giant landslides modify the flanks of the volcanoes, although such processes begin earlier and extend later in the life of the volcanoes. Late-shield strata extend the silica range as alkali basalt and even hawaiite lava flows are sparsely interlayered with tholeiite at some volcanoes. Rare are more highly fractionated shield-stage lava flows, which may reach 68 weight percent SiO 2 . Intervolcano compositional differences result mainly from variations in the part of the mantle plume sampled by magmatism and the distribution of magma sources within it. Volcanism wanes gradually as Hawaiian volcanoes move away from the hot spot, passing from the shield stage into the postshield stage. Shallow magma reservoirs (1–7-km depth) of the shield-stage volcanoes cannot be sustained as magma supply lessens, but smaller reservoirs at 20–30-km depth persist. The rate of extrusion diminishes by a factor of 10 late in the shield stage, and the composition of erupted lava becomes more alkalic—albeit erratically—as the degree of melting diminishes. The variation makes this transition, from late shield to postshield, difficult to define rigorously. Of the volcanoes old enough to have seen this transition, eight have postshield strata sufficiently distinct and widespread to map separately. Only two, Ko‘olau and Lāna‘i, lack rocks of postshield composition. Five Hawaiian volcanoes have seen rejuvenated-stage volcanism following quiescent periods that ranged from 2.0 to less than 0.5 million years. The rejuvenated stage can be brief—only one or two eruptive episodes—or notably durable. That on Ni‘ihau lasted from 2.2 to 0.4 million years ago; on Kaua‘i, the stage has been ongoing since 3.5 million years ago. As transitions go, the rejuvenated stage may be thought of as the long tail of alkalic volcanism that begins in late-shield time and persists through the postshield (+rejuvenated-stage) era. Because successive Hawaiian volcanoes erupt over long and overlapping spans of time, there is a wide range in the age of volcanism along the island chain, even though the age of Hawaiian shields is progressively younger to the southeast. For example, almost every island from Ni‘ihau to Hawai‘i had an eruption in the time between 0.3 and 0.4 million years ago, even though only the Island of Hawai‘i had active volcanoes in their shield stage during that time. Once they have formed, Hawaiian volcanoes become subject to a spectrum of processes of degradation. Primary among these are subaerial erosion, landslides, and subsidence. The islands, especially those that grow high above sea level, experience mean annual precipitation that locally exceeds 9 m, leading to rapid erosion that can carve deep canyons in less than 1 million years. Hawaiian volcanoes have also been modified by giant landslides. Seventeen discrete slides that formed in the past 5 m.y. have been identified around the main Hawaiian Islands, and fully 70 are known along the Hawaiian Ridge between Midway Islands and the Island of Hawai‘i. These giant landslides displace large amounts of seawater to generate catastrophic giant waves (megatsunami). The geologic evidence for megatsunami in the Hawaiian Islands includes chaotic coral and lava-clast breccia preserved as high as 155 m above sea level on Lāna‘i and Moloka‘i. Large Hawaiian volcanoes can persist as islands through the rapid subsidence by building upward rapidly enough. But in the long run, subsidence, coupled with surface erosion, erases any volcanic remnant above sea level in about 15 m.y. One consequence of subsidence, in concert with eustatic changes in sea level, is the drowning of coral reefs that drape the submarine flanks of the actively subsiding volcanoes. At least six reefs northwest of the Island of Hawai‘i form a stairstep configuration, the oldest being deepest.

Hawaii↗
USGS1999

Florida Bay: A history of recent ecological changes

Florida Bay is a unique subtropical estuary at the southern tip of the Florida peninsula. Recent ecological changes (seagrass die-off, algal blooms, increased turbidity) to the Florida Bay ecosystem have focused the attention of the public, commercial interests, scientists, and resource managers on the factors influencing the structure and function of Florida Bay. Restoring Florida Bay to some historic condition is the goal of resource managers, but what is not clear is what an anthropogenically-unaltered Florida Bay would look like. While there is general consensus that human activities have contributed to the changes occurring in the Florida Bay ecosystem, a high degree of natural system variability has made elucidation of the links between human activity and Florida Bay dynamics difficult. Paleoecological analyses, examination of long-term datasets, and directed measurements of aspects of the ecology of Florida Bay all contribute to our understanding of the behavior of the bay, and allow quantification of the magnitude of the recent ecological changes with respect to historical variability of the system.

Florida↗
USGS2015

Shale-gas assessment: Comparison of gas-in-place versus performance-based approaches

The recent interest in exploration for shale gas increases the demand for a reliable, compatible resource assessment. Many different assessment methods are used, commonly depending on types and quantity of data available, which may lead to significantly divergent results for the same shale-gas play. This study compares results obtained using performance-based and gas-in-place methodologies to assess a well-developed and active shale-gas play (Woodford Shale, Arkoma Basin, USA) and two untested, hypothetical shale-gas plays (Shublik and Brookian, Alaska North Slope, USA). Results show that the two assessment methods produce comparable results when assessment units are identically defined and similar geological constraints are used as input parameters. Inherent uncertainties are associated with both assessment methods, and these are related to aspects of shale-gas production that are not well understood. The performance-based method relies on decline trend analysis to generate distributions of estimated ultimate recovery (EUR), and uncertainty increases in cases of short production history. The gas-in-place method requires the application of a recovery factor to estimate technically recoverable resources, and both absolute values of recovery factors and their spatial variability are poorly documented, and therefore a source of uncertainty.

Natural Resources Research↗
USGS2011

Paleoenvironmental implications of taxonomic variation among δ 15 N values of chloropigments

Natural variations in the ratios of nitrogen isotopes in biomass reflect variations in nutrient sources utilized for growth. In order to use δ 15 N values of chloropigments of photosynthetic organisms to determine the corresponding δ 15 N values of biomass – and by extension, surface waters – the isotopic offset between chlorophyll and biomass must be constrained. Here we examine this offset in various geologically-relevant taxa, grown using nutrient sources that may approximate ocean conditions at different times in Earth’s history. Phytoplankton in this study include cyanobacteria (diazotrophic and non-diazotrophic), eukaryotic algae (red and green), and anoxygenic photosynthetic bacteria (Proteobacteria), as well as environmental samples from sulfidic lake water. Cultures were grown using N 2 , NO 3 − , and NH 4 + as nitrogen sources, and were examined under different light regimes and growth conditions. We find surprisingly high variability in the isotopic difference (δ 15 N biomass − δ 15 N chloropigment ) for prokaryotes, with average values for species ranging from −12.2‰ to +11.7‰. We define this difference as ε por , a term that encompasses diagenetic porphyrins and chlorins, as well as chlorophyll. Negative values of ε por reflect chloropigments that are 15 N-enriched relative to biomass. Notably, this enrichment appears to occur only in cyanobacteria. The average value of ε por for freshwater cyanobacterial species is −9.8 ± 1.8‰, while for marine cyanobacteria it is −0.9 ± 1.3‰. These isotopic effects group environmentally but not phylogenetically, e.g., ε por values for freshwater Chroococcales resemble those of freshwater Nostocales but differ from those of marine Chroococcales. Our measured values of ε por for eukaryotic algae (range = 4.7–8.7‰) are similar to previous reports for pure cultures. For all taxa studied, values of ε por do not depend on the type of nitrogen substrate used for growth. The observed environmental control of ε por suggests that values of ε por could be useful for determining the fractional burial of eukaryotic vs. cyanobacterial organic matter in the sedimentary record.

Geochimica et Cosmochimica Acta↗
USGS2010

Assessing societal vulnerability of U.S. Pacific Northwest communities to storm-induced coastal change

Progressive increases in storm intensities and extreme wave heights have been documented along the U.S. West Coast. Paired with global sea level rise and the potential for an increase in El Niño occurrences, these trends have substantial implications for the vulnerability of coastal communities to natural coastal hazards. Community vulnerability to hazards is characterized by the exposure, sensitivity, and adaptive capacity of human-environmental systems that influence potential impacts. To demonstrate how societal vulnerability to coastal hazards varies with both physical and social factors, we compared community exposure and sensitivity to storm-induced coastal change scenarios in Tillamook (Oregon) and Pacific (Washington) Counties. While both are backed by low-lying coastal dunes, communities in these two counties have experienced different shoreline change histories and have chosen to use the adjacent land in different ways. Therefore, community vulnerability varies significantly between the two counties. Identifying the reasons for this variability can help land-use managers make decisions to increase community resilience and reduce vulnerability in spite of a changing climate.

Oregon, Washington↗
USGS2025

Cultivating reciprocity and supporting Indigenous lifeways through the cultural transformation of natural resource management in North America

Recent decades have seen increasing calls for implementing Indigenous Knowledges (IK) in natural resource management (NRM). However, efforts have been limited by the cultural incommensurabilities between (1) NRM institutions, which are rooted in worldviews that prioritize extraction for dominant cultures and assume dominance over nature and (2) Indigenous worldviews that prioritize kincentric reciprocity with the environment. This manuscript addresses how transforming NRM institutions enables management to better support Indigenous Knowledges and lifeways. This manuscript examines incommensurabilities between NRM institutional cultures and Indigenous cultures, with the value and lifeway of reciprocity as the focal point. Through synthesizing interdisciplinary scholarship and examples from author experiences, we explore how NRM institutions in North America can transform to honour and facilitate reciprocity, especially within efforts to implement IK and support Indigenous lifeways. NRM institutions are cultural products, and in North America were born of colonial histories and cultural roots connected to modern governance and power dynamics. These cultural foundations led to NRM approaches that prioritize maximizing economic growth while guarding against overexploitation. Kincentric reciprocal relations with the environment often emphasize interdependency with more-than-human kin, place-based holistic Knowledges grounded in cultural practices and communal responsibility to cultivate social-ecological abundance for present and future generations. Incommensurabilities between NRM institutional cultures and Indigenous cultures impede efforts to implement IK and support Indigenous lifeways as: (1) rigid institutional structures do not account for Indigenous worldviews and values but instead attempt to fit IK within dominant paradigms; (2) the siloing of NRM leads to the piecemealing and invalidation of IK at the expense of Knowledge Holders and (3) ineffective public engagement strategies limit the possibility of reciprocal relations between NRM institutions and communities throughout management processes. Incommensurabilities between NRM institutional cultures and Indigenous cultures impede efforts to implement IK and support Indigenous lifeways as: (1) rigid institutional structures do not account for Indigenous worldviews and values but instead attempt to fit IK within dominant paradigms; (2) the siloing of NRM leads to the piecemealing and invalidation of IK at the expense of Knowledge Holders and (3) ineffective public engagement strategies limit the possibility of reciprocal relations between NRM institutions and communities throughout management processes. Transforming NRM institutional cultures to better implement IK and support Indigenous lifeways is key for redressing long-standing issues and ensuring social-ecological resilience and abundance. Heavy investments of time, personnel and resources are necessary for transforming NRM institutions to appropriately cultivate reciprocal relations with Indigenous communities and lands. Strategies towards transformation include decentralization through decolonial frameworks, knowledge co-production and using place-based cultural evaluation processes to improve cultural alignment.

People and Nature↗
USGS2025

Hotter temperatures alter riparian plant outcomes under regulated river conditions

Climate change and river regulation alter environmental controls on riparian plant occurrence and cover worldwide. Simultaneous changes to river flow and air temperature could result in unanticipated plant responses to novel environmental conditions. Increasing temperature could alter riparian plant response to hydrology and other factors, while river regulation may exacerbate environmental stress through novel flows like those resulting from power generation. Further, plant establishment and growth may require differing conditions, which may be decoupled by novel conditions. Using a large dataset that spans a natural 5°C mean annual temperature (MAT) gradient and a Bayesian model that integrates plant occurrence and cover, we address four questions: (1) Does hotter MAT modify plant response to hydrology, substrate composition, topography, and cover of co-occurring plant species? (2) Does the timing of hydropower tides benefit some species over others? (3) Does dam-induced erosion hinder riparian species more than upland species? (4) Do occurrence and cover respond to different environmental variables, allowing for decoupling of life history processes? We addressed these questions with data collected along 364 km of the Colorado River downstream of Glen Canyon Dam, Arizona, United States of America. Occurrence and cover class were recorded in >10,000 plots from 2016 to 2020, along with environmental covariates that repeat across the climate gradient. For 36 species, plant occurrence and cover were modeled with respect to MAT, hydrology, substrate, topography, other plant cover, and their interactions with MAT. There were four key results. (1) Increasing MAT will not only directly influence plants but will mediate their responses to the environment, including greater dependence on stable water supplies. (2) The timing of hydropower tides shapes plant community composition. (3) Dam-related erosion has an outsized effect on riparian species, which could lead to a loss of regionally unique plant species. (4) For all species, the most important covariates driving occurrence differed from those for cover, suggesting the potential for these life stages to be decoupled. Not only will climate change and river regulation independently alter plant distributions, interactions among hotter temperature, dam-controlled flow patterns, and limited fine sediments will determine which species flourish or perish under future conditions.

Arizona↗
USGS2008

A Review of Methods Applied by the U.S. Geological Survey in the Assessment of Identified Geothermal Resources

The U. S. Geological Survey (USGS) is conducting an updated assessment of geothermal resources in the United States. The primary method applied in assessments of identified geothermal systems by the USGS and other organizations is the volume method, in which the recoverable heat is estimated from the thermal energy available in a reservoir. An important focus in the assessment project is on the development of geothermal resource models consistent with the production histories and observed characteristics of exploited geothermal fields. The new assessment will incorporate some changes in the models for temperature and depth ranges for electric power production, preferred chemical geothermometers for estimates of reservoir temperatures, estimates of reservoir volumes, and geothermal energy recovery factors. Monte Carlo simulations are used to characterize uncertainties in the estimates of electric power generation. These new models for the recovery of heat from heterogeneous, fractured reservoirs provide a physically realistic basis for evaluating the production potential of natural geothermal reservoirs.

Open-File Report↗
USGS1993

SPECtrum Processing Routines User's Manual Version 3 (program SPECPR)

Introduction The SPECtrum Processing Routines (SPECPR) is a large-scale interactive program for general one-dimensional array processing and optimized for reflectance spectroscopy data and analysis. The program processes one-dimensional arrays up to 4852 data points and the operations include addition, subtraction, multiplication, division, trigonometric functions, logarithmic and exponential functions, and many more specialized routines. The Specpr user interface is a menu driven, character command system with all user input entered as ascii characters to the program. User commands are thoroughly checked for the context in which they will be used. This provides for essentially all user input mistakes to be caught and appropriate error messages to be issued. The user interface also allows for command aliasing, variable substitutions, command history and batch command processing to occur at any point in the program. The user can also control his or her own variables, increment and decrement them, and monitor certain internal variables. This flexibility allows for sophisticated programming, e.g. from specific computations, to management of a database. All arrays are treated as one dimensional lists of numbers, each with an appropriate header for identification and history. Any array can be plotted versus another array, and each axis labeled appropriately. For example, you may plot a reflectance spectrum versus wavelength or wavelength versus reflectance. The array type is simply a label, so data like temperature versus time can be treated just as easily as a reflectance spectrum. Some routines are specific to certain purposes, however. For example, the Planck black body generator is specific to intensity versus wavelength, whereas a smoothing routine could operate equally on reflectance versus wavelength or temperature versus time. Each array element can have an error bar associated with it and errors are propagated through all appropriate routines. Data points can be marked deleted and deleted points are tracked appropriately. These features allow the program to be effectively used on real world data. This philosophy has resulted in a flexible system for which a user can manipulate data arrays efficiently. The program was designed for analysis of laboratory, field, telescopic, and spacecraft spectroscopic data, and although general in nature, there are biases built in. For example, horizontal axis labels default to wavelength in micrometers, but the defaults can be changed. Because of the orientation in Specpr to process planetary and terrestrial data, and the need to access such data, Specpr has been extended to have access to non-Specpr default file types. In particular, Specpr can "skewer" an 3-dimensional (3D) data file along any of the three axes. Further, block skewers can be done with the standard deviation of the mean computed for each channel in the block. Currently, Specpr can access any of the standard file types common in the terrestrial and planetary remote sensing communities. Details on 3D file I/O are given in Chapter 6. Specpr has multiple record types available within a single Specpr data file. Currently defined record types are data and text. In a data record, a standard one-dimensional array is held, along with its header information. The header information includes a title, history, dates and time of data acquisition and when the data were last processed, the user who processed the data, information typical of a spectrum like temperature and viewing geometry, as well as pointers to wavelengths, resolution, and text. If a spectrum is more than 256 channels in length, then the data gets put in succeeding records in the file, and the following records are continuation records. The second record type is the text, where a title and a block of text (up to 19 kbytes) can be stored. This record type is typically used for a description of samples, experiments, instruments, or data processing for a particular data set. It could also store the actual commands used to create a spectrum. The commands for a complicated plot for a publication might be stored in a text record. That way, you can easily regenerate the plot, or even write the commands to a non-Specpr file, modify them with any editor and re-execute them. The file types, text and command processing, combined with the math and special functions, provide for very powerful and general analysis tool. These facilities also provide the framework for database management.

Open-File Report↗
USGS2018

Cryovolcanic rates on Ceres revealed by topography

Cryovolcanism, defined here as the extrusion of icy material from depth, may be an important planetary phenomenon in shaping the surfaces of many worlds in the outer Solar System and revealing their thermal histories 1 , 2 , 3 . However, the physics, chemistry and ubiquity of this geologic process remain poorly understood, especially in comparison to the better-studied silicate volcanism on the terrestrial planets. Ceres is the only plausibly cryovolcanic world to be orbited by a spacecraft up to now, making it the best opportunity to test the importance of cryovolcanism on bodies in the outer Solar System and compare its effects to silicate volcanism on terrestrial planets. Here, we analyse images from NASA’s Dawn mission 4 and use the finite element method to show that Ceres has experienced cryovolcanism throughout its geologic history, with an average cryomagma extrusion rate of ~10 4 m 3 yr −1 . This result shows that volcanic phenomena are important on Ceres, but orders of magnitude less so than on the terrestrial planets.

Nature Astronomy↗
USGS2013

Nature's refineries — Metals and metalloids in arc volcanoes

Chemical data for fumaroles and for atmospheric gas and ash plumes from active arc volcanoes provide glimpses of the rates of release of metal and metalloids, such as Tl and Cd, from shallow and mid-crust magmas. Data from copper deposits formed in ancient volcanoes at depths of up to about 1500 m in the fractures below paleo-fumaroles, and at around 2000–4000 m in association with sub-volcanic intrusions (porphyry copper deposits) provide evidence of sub-surface deposition of Cu–Au–Ag–Mo and a range of other minor elements including Te, Se, As and Sb. These deposits, or ‘sinks’, of metals consistently record sustained histories of magmatic gas streaming through volcanic systems interspersed by continuing intrusive and eruptive activity. Here we integrate data from ancient and modern volcanic systems and show that the fluxes of metals and metalloids are controlled by a) the maintenance of fracture permeability in the stressed crust below volcanoes and b) the chemical processes that are triggered as magmatic gas, initially undersaturated with metals and metalloids, expands from lithostatic to very low pressure conditions through fracture arrays. The recognition of gas streaming may also account for the phenomenon of ‘excess degassing’, and defines an integral, but generally understated, component of active volcanic systems – a volcanic gas core – that is likely to be integral to the progression of eruptions to Plinean state. Destabilization of solvated molecular metal and metalloid species in magmatic gas mixtures and changes in their redox state are triggered, as it expands to the surface by abrupt pressure drops, or throttles' in the fracture array that guides expansion to the surface. The electronically harder, low electronegativity metals, such as copper and iron, deposit rapidly in response to expansion followed more slowly by arsenic with antimony as sulfosalts. Heavy, large radius, softer elements such as bismuth, lead, and thallium along with cadmium are strongly fractionated along the way, eventually venting their excess along with SO 2 , CO 2 , and other components of the carrier gas, into the atmosphere. These elements, many of which are toxic, may also be dispersed by mixing with groundwater in the permeable crust below volcanoes and generate potential health risks due to Hg, As, and Se contamination of drinking water resources.

Earth-Science Reviews↗
USGS2003

Sexual selection affects local extinction and turnover in bird communities

Predicting extinction risks has become a central goal for conservation and evolutionary biologists interested in population and community dynamics. Several factors have been put forward to explain risks of extinction, including ecological and life history characteristics of individuals. For instance, factors that affect the balance between natality and mortality can have profound effects on population persistence. Sexual selection has been identified as one such factor. Populations under strong sexual selection experience a number of costs ranging from increased predation and parasitism to enhanced sensitivity to environmental and demographic stochasticity. These findings have led to the prediction that local extinction rates should be higher for species/populations with intense sexual selection. We tested this prediction by analyzing the dynamics of natural bird communities at a continental scale over a period of 21 years (1975-1996), using relevant statistical tools. In agreement with the theoretical prediction, we found that sexual selection increased risks of local extinction (dichromatic birds had on average a 23% higher local extinction rate than monochromatic species). However, despite higher local extinction probabilities, the number of dichromatic species did not decrease over the period considered in this study. This pattern was caused by higher local turnover rates of dichromatic species, resulting in relatively stable communities for both groups of species. Our results suggest that these communities function as metacommunities, with frequent local extinctions followed by colonization. Anthropogenic factors impeding dispersal might therefore have a significant impact on the global persistence of sexually selected species.

Proceedings of the National Academy of Sciences↗
USGS2009

Fungal endophytes: diversity and functional roles

All plants in natural ecosystems appear to be symbiotic with fungal endophytes. This highly diverse group of fungi can have profound impacts on plant communities through increasing fitness by conferring abiotic and biotic stress tolerance, increasing biomass and decreasing water consumption, or decreasing fitness by altering resource allocation. Despite more than 100 yr of research resulting in thousands of journal articles, the ecological significance of these fungi remains poorly characterized. Historically, two endophytic groups (clavicipitaceous (C) and nonclavicipitaceous (NC)) have been discriminated based on phylogeny and life history traits. Here, we show that NC-endophytes represent three distinct functional groups based on host colonization and transmission, in planta biodiversity and fitness benefits conferred to hosts. Using this framework, we contrast the life histories, interactions with hosts and potential roles in plant ecophysiology of C- and NC-endophytes, and highlight several key questions for future work in endophyte biology.

New Phytologist↗
USGS2001

Geologic studies in Alaska by the U.S. Geological Survey, 1999

The collection of nine papers that follow continue the series of U.S. Geological Survey (USGS) investigative reports in Alaska under the broad umbrella of the geologic sciences. The series presents new and sometimes preliminary findings that are of interest to earth scientists in academia, government, and industry; to land and resource managers; and to the general public. Reports presented in Geologic Studies in Alaska cover a broad spectrum of topics from various parts of the State (fig. 1), serving to emphasize the diversity of USGS efforts to meet the Nation's needs for earth-science information in Alaska. The papers in this volume are organized under the topics: Hazards, Geologic Framework, Environment and Climate, and Resources. This organization is intended to reflect the scope and objectives of USGS geologic programs currently active in Alaska. The two Hazards studies discuss volcano-related topics in the seismically active southcentral Alaska region. The first paper revisits the eruptive events of Redoubt Volcano that occurred more than a decade ago and the subsequent development of the Alaska Volcano Observatory (AVO). This treatise documents the historic impact of this eruption and briefly summarizes the state of our knowledge of the other Cook Inlet, Alaska Peninsula, and Aleutian Island volcanoes. Finally, it discusses the recent role that AVO has had in seismic station installation and hazard assessment at volcanically active sites throughout the world. The second paper discusses the eruptive history of Snowy Mountain in the upper Alaska Peninsula. Because subsets of its 25-30 lava flows erupted as packages in short episodes, calculation of the volcano's lifetime average volumetric eruption rate is problematic. A portion of the cone was hydrothermally weakened and collapsed in the late Holocene producing a 22-km2 debris avalanche. Geologic Framework studies provide background information that is the scientific basis for present and future earth science investigations. The first paper compares and contrasts the Insular-Intermontane suture zone (IISZ) of southeast Alaska with the Adria-Europe suture zone (AESZ) of Switzerland and Hungary. The study develops the hypothesis that the zones have distinct differences as well as similarities and neither is a simple lithotectonic terrane boundary. The second paper discusses the relation among volcanic, glacial, and tectonic activity in the Cold Bay and False Pass 1 :250,000-scale quadrangles on the Alaska Peninsula. During Pleistocene time, continental-shelf glaciations and two massive volcanic centers were the dominant controls over landscape development. The third paper gives detailed geologic information for Paleozoic rocks within the Taylor Mountains D-1 quadrangle portion of the Holitna Lowland of southwestern Alaska. Because of the excellent preservation of megafossils, these Silurian and Ordovician strata lend themselves to detailed statigraphic investigations. Further, low thermal alteration indices of this area have made them a potential target of petroleum exploration. The final report in this section discusses the development of a new spectral enhancement approach for interpreting Multispectral Scanner (MSS) and Thematic Mapper (TM) satellite images. This technique enhances the use of remote sensing data in identifying geologic units in areas that have been poorly investigated. This study used this technique to better define the distribution of a JMtu (mafic, ultramafic, and sedimentary) unit and a PzZrqs (pelitic and quartzitic schist) unit. Environment and climate studies are the emphasis of two papers. One presents the first radiocarbon-dated postglacial vegetation history of the Kenai Mountains of southcentral Alaska. This reconstruction is the result of the analysis of pollen assemblages and peat from sediments collected in Tern Lake and presents a minimum age for deglaciation of these interior valleys at 9,31 0±200 yr B .P. Current vegetation, however, developed within the past ca. 2,500 years. A second study discusses the cycling of arsenic and cadmium in sub-arctic boreal forest ecosystems typical of interior Alaska and defines the importance of various natural (geogenic) sources. The transport and uptake into vegetation of these elements from soils developed from loess as well as soils developed from the major rock units is presented. The bioaccumulation of cadmium in willow (Salix sp.) and its potential consequence to the health of browsing animals is discussed. Papers related to resource issues comprise the topic of the final report. This paper presents a brief statistical summary of the geochemistry of rock samples collected in the east-central portion of the Eagle 1 :250,000-scale quadrangle. This study helps define the rock unit source of both resource- and environmental-based chemical elements of interest in the Fortymile mining district. Two bibliographies at the end of the volume list reports covering Alaska earth science topics in USGS publications during 1999 and reports about Alaska by USGS authors in non-USGS publications during the same period.

Alaska↗
USGS2017

Expanding the role of reactive transport models in critical zone processes

Models test our understanding of processes and can reach beyond the spatial and temporal scales of measurements. Multi-component Reactive Transport Models (RTMs), initially developed more than three decades ago, have been used extensively to explore the interactions of geothermal, hydrologic, geochemical, and geobiological processes in subsurface systems. Driven by extensive data sets now available from intensive measurement efforts, there is a pressing need to couple RTMs with other community models to explore non-linear interactions among the atmosphere, hydrosphere, biosphere, and geosphere. Here we briefly review the history of RTM development, summarize the current state of RTM approaches, and identify new research directions, opportunities, and infrastructure needs to broaden the use of RTMs. In particular, we envision the expanded use of RTMs in advancing process understanding in the Critical Zone, the veneer of the Earth that extends from the top of vegetation to the bottom of groundwater. We argue that, although parsimonious models are essential at larger scales, process-based models offer tools to explore the highly nonlinear coupling that characterizes natural systems. We present seven testable hypotheses that emphasize the unique capabilities of process-based RTMs for (1) elucidating chemical weathering and its physical and biogeochemical drivers; (2) understanding the interactions among roots, micro-organisms, carbon, water, and minerals in the rhizosphere; (3) assessing the effects of heterogeneity across spatial and temporal scales; and (4) integrating the vast quantity of novel data, including “omics” data (genomics, transcriptomics, proteomics, metabolomics), elemental concentration and speciation data, and isotope data into our understanding of complex earth surface systems. With strong support from data-driven sciences, we are now in an exciting era where integration of RTM framework into other community models will facilitate process understanding across disciplines and across scales.

Earth-Science Reviews↗