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USGS2008

EAARL coastal topography - Northern Gulf of Mexico

These remotely sensed, geographically referenced elevation measurements of Lidar-derived coastal topography were produced as a collaborative effort between the U.S. Geological Survey (USGS), Florida Integrated Science Center (FISC), St. Petersburg, FL and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. One objective of this research is to create techniques to survey areas for the purposes of geomorphic change studies following major storm events. The USGS Coastal and Marine Geology Program's National Assessment of Coastal Change Hazards project is a multi-year undertaking to identify and quantify the vulnerability of U.S. shorelines to coastal change hazards such as effects of severe storms, sea-level rise, and shoreline erosion and retreat. Airborne Lidar surveys conducted during periods of calm weather are compared to surveys collected following extreme storms in order to quantify the resulting coastal change. Other applications of high-resolution topography include habitat mapping, ecological monitoring, volumetric change detection, and event assessment. The purpose of this project is to provide highly detailed and accurate datasets of the northern Gulf of Mexico coastal areas, acquired on September 19, 2004, immediately following Hurricane Ivan. The datasets are made available for use as a management tool to research scientists and natural resource managers. An innovative airborne Lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Airborne Advanced Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532 nanometer) Lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive Lidar, a down-looking RGB (red-green-blue) digital camera, a high-resolution multi-spectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers and an integrated miniature digital inertial measurement unit which provide for sub-meter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a Lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system on September 19, 2004. The survey resulted in the acquisition of 3.2 gigabytes of data. The data were processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of Lidar data in an interactive or batch mode. Modules for pre-survey flight line definition, flight path plotting, Lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is routinely used to create maps that represent submerged or sub-aerial topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of 'last return' elevations.

Alabama, Florida, Mississippi↗
USGS2019

Recruitment dynamics and reproductive ecology of Blue Sucker in Texas, with a focus on the Big Bend region of the Rio Grande

Blue Sucker Cycleptus elongatus is a state-listed threatened species in Texas and is considered vulnerable throughout its range. Once considered a single, wide-ranging species, blue suckers are now recognized as a complex of closely related, but genetically and morphologically distinct species within the genus Cycleptus , including an undescribed species within the Rio Grande Basin. Numerous factors likely are driving the decline of blue suckers in Texas, including flow alteration, water quality, habitat fragmentation, and changing land-use patterns, but it is not clear how these factors interact to influence the abundance and distribution of the species. Our research integrates a variety of methodologies to provide information critical to the conservation and management of Blue Sucker in the Sabine River (Texas and Louisiana) and Colorado River (Texas) and Rio Grande Blue Sucker Cycleptus sp. cf. elongatus in the Rio Grande. The objectives of this report are to 1) determine the habitat associations of the young-of-year (YOY) Rio Grande Blue Sucker; 2) assess the effects of flow regime on growth and recruitment of Blue Sucker in the lower Sabine River; and 3) examine differences in life-history traits of Blue Suckers and flow regime across river basins in Texas. This study is the first to quantitatively address the sequence of YOY blue sucker mesohabitat use and increases our understanding of early life history of blue suckers, and the results of this work will help to develop conservation and management strategies, e.g., prioritizing conservation areas, developing flow recommendation, etc., for blue suckers throughout their geographic distribution.

Texas↗
USGS2014

Geologic implications of gas hydrates in the offshore of India: results of the National Gas Hydrate Program Expedition 01

The Indian National Gas Hydrate Program Expedition 01 (NGHP-01) is designed to study the occurrence of gas hydrate along the passive continental margin of the Indian Peninsula and in the Andaman convergent margin, with special emphasis on understanding the geologic and geochemical controls on the occurrence of gas hydrate in these two diverse settings. The NGHP-01 expedition established the presence of gas hydrates in the Krishna-Godavari and Mahanadi Basins, and the Andaman Sea. The expedition discovered in the Krishna-Godavari Basin one of the thickest gas hydrate accumulations ever documented, in the Andaman Sea one of the thickest and deepest gas hydrate stability zones in the world, and established the existence of a fully developed gas hydrate petroleum system in all three basins. The primary goal of NGHP-01 was to conduct scientific ocean drilling/coring, logging, and analytical activities to assess the geologic occurrence, regional context, and characteristics of gas hydrate deposits along the continental margins of India. This was done in order to meet the long-term goal of exploiting gas hydrate as a potential energy resource in a cost effective and safe manner. During its 113.5-day voyage, the D/V JOIDES Resolution cored and/or drilled 39 holes at 21 sites (1 site in Kerala-Konkan, 15 sites in Krishna-Godavari, 4 sites in Mahanadi, and 1 site in the Andaman deep offshore area), penetrated more than 9250 m of sedimentary section, and recovered nearly 2850 m of core. Twelve holes were logged with logging-while-drilling (LWD) tools and an additional 13 holes were wireline logged. The science team utilized extensive on-board laboratory facilities to examine and prepare preliminary reports on the physical properties, geochemistry, and sedimentology of all the data collected prior to the end of the expedition. Samples were also analyzed in additional post-expedition shore-based studies conducted in leading laboratories around the world. One of the specific objectives of this expedition was to test gas hydrate formation models and constrain model parameters, especially those that account for the formation of concentrated gas hydrate accumulations. The necessary data for characterizing the occurrence of in situ gas hydrate, such as interstitial water chlorinities, core-derived gas chemistry, physical and sedimentological properties, thermal images of the recovered cores, and downhole measured logging data (LWD and/or conventional wireline log data), were obtained from most of the drill sites established during NGHP-01. Almost all of the drill sites yielded evidence for the occurrence of gas hydrate; however, the inferred in situ concentration of gas hydrate varied substantially from site to site. For the most part, the interpretation of downhole logging data, core thermal images, interstitial water analyses, and pressure core images from the sites drilled during NGHP-01 indicate that the occurrence of concentrated gas hydrate is mostly associated with the presence of fractures in the sediments, and in some limited cases, by coarser grained (mostly sand-rich) sediments.

Marine and Petroleum Geology↗
USGS2024

Anaerobic biodegradation of perfluorooctane sulfonate (PFOS) and microbial community composition in soil amended with a dechlorinating culture and chlorinated solvents

Perfluorooctane sulfonate (PFOS), one of the most frequently detected per - and polyfluoroalkyl substances (PFAS) occurring in soil, surface water, and groundwater near sites contaminated with aqueous film-forming foam (AFFF), has proven to be recalcitrant to many destructive remedies, including chemical oxidation. We investigated the potential to utilize microbially mediated reduction (bioreduction) to degrade PFOS and other PFAS through addition of a known dehalogenating culture, WBC-2, to soil obtained from an AFFF-contaminated site. A substantial decrease in total mass of PFOS (soil and water) was observed in microcosms amended with WBC-2 and chlorinated volatile organic compound (cVOC) co-contaminants — 46.4 ± 11.0 % removal of PFOS over the 45-day experiment. In contrast, perfluorooctanoate (PFOA) and 6:2 fluorotelomer sulfonate (6:2 FTS) concentrations did not decrease in the same microcosms. The low or non-detectable concentrations of potential metabolites in full PFAS analyses, including after application of the total oxidizable precursor assay, indicated that defluorination occurred to non-fluorinated compounds or ultrashort-chain PFAS. Nevertheless, additional research on the metabolites and degradation pathways is needed. Population abundances of known dehalorespirers did not change with PFOS removal during the experiment, making their association with PFOS removal unclear. An increased abundance of sulfate reducers in the genus Desulfosporosinus (Firmicutes) and Sulfurospirillum (Campilobacterota) was observed with PFOS removal, most likely linked to initiation of biodegradation by desulfonation. These results have important implications for development of in situ bioremediation methods for PFAS and advancing knowledge of natural attenuation processes.

Science of the Total Environment↗
USGS2014

Proceedings of the U.S. Geological Survey Eighth Biennial Geographic Information Science Workshop and first The National Map Users Conference, Denver, Colorado, May 10-13, 2011

The U.S. Geological Survey (USGS) is sponsoring the first The National Map Users Conference in conjunction with the eighth biennial Geographic Information Science (GIS) Workshop on May 10-13, 2011, in Lakewood, Colorado. The GIS Workshop will be held at the USGS National Training Center, located on the Denver Federal Center, Lakewood, Colorado, May 10-11. The National Map Users Conference will be held directly after the GIS Workshop at the Denver Marriott West, a convention hotel in the Lakewood, Colorado area, May 12-13. The National Map is designed to serve the Nation by providing geographic data and knowledge for government, industry, and public uses. The goal of The National Map Users Conference is to enhance communications and collaboration among the communities of users of and contributors to The National Map, including USGS, Department of the Interior, and other government GIS specialists and scientists, as well as the broader geospatial community. The USGS National Geospatial Program intends the conference to serve as a forum to engage users and more fully discover and meet their needs for the products and services of The National Map. The goal of the GIS Workshop is to promote advancement of GIS and related technologies and concepts as well as the sharing of GIS knowledge within the USGS GIS community. This collaborative opportunity for multi-disciplinary GIS and associated professionals will allow attendees to present and discuss a wide variety of geospatial-related topics. The Users Conference and Workshop collaboration will bring together scientists, managers, and data users who, through presentations, posters, seminars, workshops, and informal gatherings, will share accomplishments and progress on a variety of geospatial topics. During this joint event, attendees will have the opportunity to present or demonstrate their work; to develop their knowledge by attending hands-on workshops, seminars, and presentations given by professionals from USGS and other Federal Agencies, GIS related companies, and academia; and to network with other professionals to develop collaborative opportunities. Specific conference topics include scientific and modeling applications using The National Map, opportunities for partnerships, and advances in geospatial technologies. The first part of the week will be the GIS Workshop, offered as a pre-conference seminar. It will focus on hands-on GIS training and seminars concerning current topics of geospatial interest. The focus of the USGS GIS Workshop is to showcase specific techniques and concepts for using GIS in support of science. The presentations will be educational and not a marketing endeavor. To promote awareness of and interaction with selected USGS corporate and local science center data products, as well as promoting collaboration, a “GIS Olympics” event will be held Tuesday evening during the GIS Workshop. The second part of the week will feature interactive briefings and discussions on issues and opportunities of The National Map. The focus of the Users Conference will be on the role of The National Map in supporting science initiatives, emergency response, land and wildlife management, and other activities. All presentations at the Users Conference include use or innovations related to a The National Map data theme or application. On Wednesday evening, a poster session is being held as a combined event for all attendees and as a juncture between the events. On Thursday evening, the Henry Gannett Award will be presented. Additionally, poster awards will be presented. Several prominent speakers are featured at plenary sessions at The National Map Users Conference, including Deanna A. Archuleta, Deputy Assistant Secretary for Water and Science, Department of the Interior; Dr. Barbara P. Buttenfield, Professor of Geography at the University of Colorado in Boulder; best-selling author Frederick Reuss; and Dr. Joel Scheraga, Senior Advisor for Climate Adaptation, U.S. Environmental Protection Agency. Additionally, panel discussions have attracted participation from notable experts from government, academia, and the private sector. This Proceedings volume will serve as an activity reference for workshop attendees, as well as an archive of technical abstracts presented at the workshop. Author, co-author, and presenter names, affiliations, and contact information are listed with presentation titles with the abstracts. Some hands-on sessions are offered twice; in these instances, abstracts submitted for publication are presented in the proceedings on both days on which they are offered.

Scientific Investigations Report↗
USGS2007

Arsenic attenuation by oxidized aquifer sediments in Bangladesh

Recognition of arsenic (As) contamination of shallow fluvio-deltaic aquifers in the Bengal Basin has resulted in increasing exploitation of groundwater from deeper aquifers that generally contain low concentrations of dissolved As. Pumping-induced infiltration of high-As groundwater could eventually cause As concentrations in these aquifers to increase. This study investigates the adsorption capacity for As of sediment from a low-As aquifer near Dhaka, Bangladesh. A shallow, chemically-reducing aquifer at this site extends to a depth of 50 m and has maximum As concentrations in groundwater of 900 μg/L. At depths greater than 50 m, geochemical conditions are more oxidizing and groundwater has < 5 μg/L As. There is no thick layer of clay at this site to inhibit vertical transport of groundwater. Arsenite [As(III)] is the dominant oxidation state in contaminated groundwater; however, data from laboratory batch experiments show that As(III) is oxidized to arsenate [As(V)] by manganese (Mn) minerals that are present in the oxidized sediment. Thus, the long-term viability of the deeper aquifers as a source of water supply is likely to depend on As(V) adsorption. The adsorption capacity of these sediments is a function of the oxidation state of As and the concentration of other solutes that compete for adsorption sites. Arsenite that was not oxidized did adsorb, but to a much lesser extent than As(V). Phosphate (P) caused a substantial decrease in As(V) adsorption. Increasing pH and concentrations of silica (Si) had lesser effects on As(V) adsorption. The effect of bicarbonate (HCO 3 ) on As(V) adsorption was negligible. Equilibrium constants for adsorption of As(V), As(III), P, Si, HCO 3 , and H were determined from the experimental data and a quantitative model developed. Oxidation of As(III) was modeled with a first-order rate constant. This model was used to successfully simulate As(V) adsorption in the presence of multiple competing solutes. Results from these experiments show that oxidized sediments have a substantial but limited capacity for removal of As from groundwater.

Dhaka↗
USGS2010

Strategic Science for Coral Ecosystems 2007-2011

Shallow and deep coral ecosystems are being imperiled by a combination of stressors. Climate change, unsustainable fishing practices, and disease are transforming coral communities at regional to global scales. At local levels, excessive amounts of sediments, nutrients, and contaminants are also impacting the many benefits that healthy coral ecosystems provide. This Plan, Strategic Science for Coral Ecosystems, describes the information needs of resource managers and summarizes current research being conducted by U.S. Geological Survey (USGS) scientists and partners. It outlines important research actions that need to be undertaken over the next five years to achieve more accurate forecasting of future conditions and develop more effective decision-support tools to adaptively manage coral ecosystems. The overarching outcome of this Plan, if fully implemented, would be in transferring relevant knowledge to decision-makers, enabling them to better protect and sustain coral ecosystem services. These services include sources of food, essential habitat for fisheries and protected species, protection of coastlines from wave damage and erosion, recreation, and cultural values for indigenous communities. The USGS has a long history of research and monitoring experience in studying ancient and living coral communities and serving many stakeholders. The research actions in this Plan build on the USGS legacy of conducting integrated multidisciplinary science to address complex environmental issues. This Plan is responsive to Federal legislation and authorities and a variety of external and internal drivers that include the President's Ocean Action Plan, the recommendations of the Coral Reef Task Force, the information needs of Bureaus in the Department of Interior, the USGS Bureau Science Strategy (USGS 2007) and the formal plans of several USGS Programs. To achieve this Plan's desired outcomes will require increased funding and more effective coordination and collaboration among USGS managers and scientists within a national and international framework of partnerships in coral ecosystem science.

Circular↗
USGS2022

From drought to deluge: Spatiotemporal variation in migration routing, survival, travel time and floodplain use of an endangered migratory fish

We developed a novel statistical model to relate the daily survival and migration dynamics of an endangered anadromous fish to river flow and water temperature during both extreme drought and severe flooding in an intensively managed river system. Our Bayesian temporally stratified multistate mark recapture model integrates over unobserved travel times and route transitions to efficiently estimate covariate relationships and includes an adjustment for telemetry tag battery failure. We applied the model to acoustic-tagged juvenile Sacramento river winter-run Chinook salmon (Oncorhynchus tshawytscha) and found that survival decreased with decreasing river flows and increased water temperatures. We found that fish were likely to enter at a large floodplain during flood conditions and that survival in floodplain was comparable to the mainstem Sacramento river. Our study demonstrates the response of an endangered anadromous fish population to extreme spatial and temporal variability in habitat accessibility and quality. The general model framework we introduce here can be applied to telemetry of migratory fish through systems with multiple routes to efficiently estimate spatiotemporal variation in survival, travel time, and routing.

California↗
USGS2015

Modeling groundwater nitrate concentrations in private wells in Iowa

Contamination of drinking water by nitrate is a growing problem in many agricultural areas of the country. Ingested nitrate can lead to the endogenous formation of N-nitroso compounds, potent carcinogens. We developed a predictive model for nitrate concentrations in private wells in Iowa. Using 34,084 measurements of nitrate in private wells, we trained and tested random forest models to predict log nitrate levels by systematically assessing the predictive performance of 179 variables in 36 thematic groups (well depth, distance to sinkholes, location, land use, soil characteristics, nitrogen inputs, meteorology, and other factors). The final model contained 66 variables in 17 groups. Some of the most important variables were well depth, slope length within 1 km of the well, year of sample, and distance to nearest animal feeding operation. The correlation between observed and estimated nitrate concentrations was excellent in the training set (r-square = 0.77) and was acceptable in the testing set (r-square = 0.38). The random forest model had substantially better predictive performance than a traditional linear regression model or a regression tree. Our model will be used to investigate the association between nitrate levels in drinking water and cancer risk in the Iowa participants of the Agricultural Health Study cohort.

Iowa↗
USGS2011

Algal bioassessment metrics for wadeable streams and rivers of Maine, USA

Many state water-quality agencies use biological assessment methods based on lotic fish and macroinvertebrate communities, but relatively few states have incorporated algal multimetric indices into monitoring programs. Algae are good indicators for monitoring water quality because they are sensitive to many environmental stressors. We evaluated benthic algal community attributes along a landuse gradient affecting wadeable streams and rivers in Maine, USA, to identify potential bioassessment metrics. We collected epilithic algal samples from 193 locations across the state. We computed weighted-average optima for common taxa for total P, total N, specific conductance, % impervious cover, and % developed watershed, which included all land use that is no longer forest or wetland. We assigned Maine stream tolerance values and categories (sensitive, intermediate, tolerant) to taxa based on their optima and responses to watershed disturbance. We evaluated performance of algal community metrics used in multimetric indices from other regions and novel metrics based on Maine data. Metrics specific to Maine data, such as the relative richness of species characterized as being sensitive in Maine, were more correlated with % developed watershed than most metrics used in other regions. Few community-structure attributes (e.g., species richness) were useful metrics in Maine. Performance of algal bioassessment models would be improved if metrics were evaluated with attributes of local data before inclusion in multimetric indices or statistical models.

Maine↗
USGS2002

Groundwater vulnerability: Interactions of chemical and site properties

This study brings together extensive, multi-annual groundwater monitoring datasets from the UK and Midwestern US to test the relative importance of site (e.g. land use, soil and aquifer type) and chemical factors (e.g. solubility in water) and between and within year variations in controlling groundwater contamination by pesticides. ANOVA (general linear modelling) was used to test the significance and proportion of variation explained by each factor and their interactions. Results from both the UK and US datasets show that: (i) Chemical and site factors both have a statistically significant influence on groundwater pollution; (ii) Site factors on their own explain a greater proportion of data variance than chemical factors on their own; (iii) Interaction between site and chemical factors represents the most important control on the occurrence of pesticides in groundwater; (iv) Variation within the year was slight but still significant while there was no significant difference between data from consecutive years. The combination of factors analysed in this study were sufficient to explain the majority of the variation in the data save for that ascribable to the analytical detection limit. The results provide statistical evidence that it is viable to develop both molecular methods and groundwater vulnerability as tools to understanding pollution, but that a greater emphasis should be placed on their interaction to fully understand pesticide contamination.

Midwest region↗
USGS2001

Formation and failure of volcanic debris dams in the Chakachatna River valley associated with eruptions of the Spurr volcanic complex, Alaska

The formation of lahars and a debris avalanche during Holocene eruptions of the Spurr volcanic complex in south-central Alaska have led to the development of volcanic debris dams in the Chakachatna River valley. Debris dams composed of lahar and debris-avalanche deposits formed at least five times in the last 8000-10,000 years and most recently during eruptions of Crater Peak vent in 1953 and 1992. Water impounded by a large debris avalanche of early Holocene (?) age may have destabilized an upstream glacier-dammed lake causing a catastrophic flood on the Chakachatna River. A large alluvial fan just downstream of the debris-avalanche deposit is strewn with boulders and blocks and is probably the deposit generated by this flood. Application of a physically based dam-break model yields estimates of peak discharge (Qp) attained during failure of the debris-avalanche dam in the range 104 < Qp < 106 m3 s-1 for plausible breach erosion rates of 10-100 m h-1. Smaller, short-lived, lahar dams that formed during historical eruptions in 1953, and 1992, impounded smaller lakes in the upper Chakachatna River valley and peak flows attained during failure of these volcanic debris dams were in the range 103 < Qp < 104 m3 s-1 for plausible breach erosion rates. Volcanic debris dams have formed at other volcanoes in the Cook Inlet region, Aleutian arc, and Wrangell Mountains but apparently did not fail rapidly or result in large or catastrophic outflows. Steep valley topography and frequent eruptions at volcanoes in this region make for significant hazards associated with the formation and failure of volcanic debris dams. Published by Elsevier Science B.V.

Geomorphology↗
USGS2026

Predictions of anthropogenic background PFAS concentrations in soil and relation to bedrock lithology and groundwater quality

Detectable concentrations of per- and polyfluoroalkyl substances (PFAS) have been observed in soils in remote areas and presumably originate from atmospheric deposition. These anthropogenic background concentrations may enable some PFAS to leach to groundwater at levels that exceed regulatory criteria for drinking water. However, anthropogenic background soil concentrations and their connection to groundwater are not well characterized. We developed a boosted regression tree model to predict perfluorooctanesulfonic acid (PFOS) and perfluorooctanoic acid (PFOA) concentrations in shallow soils across northern New England. Low soil pH was the most important predictor of elevated anthropogenic PFOS and PFOA concentrations in background soils, rather than potential PFAS sources, land use, or population density. Total organic carbon (TOC) was also an important predictor for PFOS soil concentrations. Model predictions indicate that 73% of the shallow soils within Maine, Vermont, and New Hampshire exceed New Hampshire’s Soil Remediation Standard for PFOS (0.5 ng/g) and 41% exceed the PFOA standard (0.4 ng/g). Analysis of soil model results and groundwater data suggests that areas with high soil pH are associated with higher groundwater detection frequencies, illustrating how areas with less retention in soil are, conversely, also areas with potentially greater groundwater vulnerability. Further analysis indicates that groundwater may be more vulnerable in calcareous lithologies.

Maine, New Hampshire, Vermont↗
USGS2017

Multistressor predictive models of invertebrate condition in the Corn Belt, USA

Understanding the complex relations between multiple environmental stressors and ecological conditions in streams can help guide resource-management decisions. During 14 weeks in spring/summer 2013, personnel from the US Geological Survey and the US Environmental Protection Agency sampled 98 wadeable streams across the Midwest Corn Belt region of the USA for water and sediment quality, physical and habitat characteristics, and ecological communities. We used these data to develop independent predictive disturbance models for 3 macroinvertebrate metrics and a multimetric index. We developed the models based on boosted regression trees (BRT) for 3 stressor categories, land use/land cover (geographic information system [GIS]), all in-stream stressors combined (nutrients, habitat, and contaminants), and for GIS plus in-stream stressors. The GIS plus in-stream stressor models had the best overall performance with an average cross-validation R 2 across all models of 0.41. The models were generally consistent in the explanatory variables selected within each stressor group across the 4 invertebrate metrics modeled. Variables related to riparian condition, substrate size or embeddedness, velocity and channel shape, nutrients (primarily NH 3 ), and contaminants (pyrethroid degradates) were important descriptors of the invertebrate metrics. Models based on all measured in-stream stressors performed comparably to models based on GIS landscape variables, suggesting that the in-stream stressor characterization reasonably represents the dominant factors affecting invertebrate communities and that GIS variables are acting as surrogates for in-stream stressors that directly affect in-stream biota.

Illinois, Indiana, Iowa, Kansas, Kentucky, Minneso↗
USGS2004

Fundamental concepts of recharge in the Desert Southwest: A regional modeling perspective

Recharge in arid basins does not occur in all years or at all locations within a basin. In the desert Southwest potential evapotranspiration exceeds precipitation on an average annual basis and, in many basins, on an average monthly basis. Ground-water traveltime from the surface to the water table and recharge to the water table vary temporally and spatially owing to variations in precipitation, air temperature, root zone and soil properties and thickness, faults and fractures, and hydrologic properties of geologic strata in the unsaturated zone. To highlight the fundamental concepts controlling recharge in the Southwest, and address the temporal and spatial variability of recharge, a basin characterization model was developed using a straightforward water balance approach to estimate potential recharge and runoff and allow for determination of the location of recharge within a basin. It provides a means for interbasin comparison of the mechanisms and processes that result in recharge and calculates the potential for recharge under current, wetter, and drier climates. Model estimates of recharge compare favorably with other methods estimating recharge in the Great Basin. Results indicate that net infiltration occurs in less than 5 percent of the area of a typical southwestern basin. Decadal-scale climatic cycles have substantially different influences over the extent of the Great Basin, with the southern portion receiving 220 percent higher recharge than the mean recharge during El Niño years in a positive phase of the Pacific Decadal Oscillation, whereas the northern portion receives only 48 percent higher recharge. In addition, climatic influences result in ground-water travel times that are expected to vary on time scales of days to centuries, making decadal-scale climate cycles significant for understanding recharge in arid lands.

Water Science and Application↗
USGS2019

Exit here: Strategies for dealing with aging dams and reservoirs

Aging infrastructure is prevalent throughout the world but water control management structures, specifically dams are of growing concern. Dams and their corresponding reservoirs have inherent, but separate, lifespans. The proportion of dams around the world that continue operation beyond their intended lifespans is growing at an alarming rate. Society will not only have to navigate the tradeoffs associated with the deterioration of services provided by reservoirs and dams, but also impending structural failures. Society is nearing a critical pinch point where we will have to decide how to deal with dams and reservoirs at scales that range from a single system to multiple systems in large watersheds. No comprehensive strategy exists to inform both the range of actions that can be applied to such infrastructure and how such actions would influence biophysical, socioeconomic, and geopolitical tradeoffs. The development of proactive exit strategies is a critical first step in ensuring controlled transitions for aging dams and reservoirs. Herein, we present an overview of actions and considerations for aging dams and reservoirs in the USA followed by an initial framework for exit strategy development to launch further discussion on how society could deal with this aging infrastructure.

Aquatic Sciences↗
USGS2021

National Park Service Vegetation Mapping Inventory Program: Great Smoky Mountains National Park vegetation mapping project

The National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program is an effort to classify, describe, and map existing vegetation communities in national park units throughout the United States. The NPS VMI Program is managed by the NPS Natural Resource Stewardship and Science Inventory and Monitoring Program and provides baseline vegetation information to natural resource managers, researchers, and ecologists. The U.S. Geological Survey Upper Midwest Environmental Sciences Center, NatureServe, and NPS Great Smoky Mountains National Park (GRSM, also referred to as the “Park”) have completed vegetation classification and mapping of GRSM, including the Foothills Parkway, for the NPS VMI Program. Mappers, ecologists, and botanists collaborated to affirm vegetation types of GRSM and to determine how best to map the vegetation types by using aerial imagery. A vegetation classification developed in 2003 by NatureServe and the NPS served as a foundation to further classify and map the vegetation types of the Park. Data from an additional 10 vegetation plots supported vegetation types either rare or not documented in the 2003 classification. Data from 203 verification sites were collected to test the field key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 972 accuracy assessment (AA) sites were collected (of which 966 were used to test accuracy of the vegetation map layer). This GRSM vegetation mapping project identified 112 vegetation types consisting of 105 association types in the U.S. National Vegetation Classification (USNVC), 2 “park-special” types, 1 “map-special” type, and 4 cultural types in the USNVC. To map the vegetation and land cover of GRSM, 52 map classes were developed. Of these 52 map classes, 46 represent natural (including ruderal) vegetation types, most of which types are recognized in the USNVC. For the remaining 6 of the 52 map classes, 4 represent USNVC cultural types for agricultural and developed areas, and 2 represent non-USNVC types for nonvegetated open water and nonvegetated rock. Features were interpreted from viewing four-band digital aerial imagery using digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems; digital aerial imagery was collected during September 23–October 30, 2015. The interpreted data were digitally and spatially referenced, thus making the spatial-database layers usable in a geographic information system. Polygon units were mapped to either a 0.5- or 0.25- hectare (ha) minimum mapping unit, depending on vegetation type. A geodatabase containing several feature-class layers and tables provides the locations and data of USNVC vegetation types (vegetation map layer), vegetation plots, verification sites, AA sites, project boundary extent, and aerial image centers and flight lines. Covering 210,875 ha, the feature-class layer and related tables for the vegetation map layer provide 34,084 polygons of detailed attribute data when special modifiers are not considered (average polygon size of 6.2 ha) and 36,589 polygons of detailed attribute data when special modifiers are considered (average polygon size of 5.8 ha). Each map polygon is assigned a map-class code and name and, when applicable, are linked to USNVC classification tables within the geodatabase. The vegetation map extent includes the administrative boundary for GRSM and the Foothills Parkway. A summary report, generated from the vegetation map layer, concludes that the 46 map classes representing natural (including ruderal) vegetation types apply to 99.2% of polygons (33,797 polygons; average size of 6.2 ha) and cover 98.6% of the Park (207,971.4 ha). Further broken down, map classes representing natural vegetation types indicate that the Park is 97.7% forest and woodland (205,882.5 ha), 0.6% shrubland (1,174.6 ha), and 0.4% herbaceous (914.3 ha). Map classes representing cultural vegetation types apply to 0.8% of polygons (259 polygons; average size of 4.9 ha) and cover 0.6% of the Park (1,277.4 ha). Map classes representing nonvegetation open and flowing water and unvegetated rock apply to 0.08% of polygons (28 polygons; average size of 58.1 ha) and cover 0.8% of the Park (1,625.9 ha). A thematic AA study was completed of map classes representing the natural (including ruderal) vegetation types of the Park. Initial AA results were discussed with NPS staff from the Park. Following input from NPS staff on how to handle map classes that fell below accuracy standards, adjustments were made to the vegetation map layer. Final results indicate an overall accuracy of 80.64% (kappa index of 79.96% for chance agreements) based on data from 966 of the 972 AA sites. Most individual map-class themes exceed the NPS VMI Program standard of 80% with a 90% confidence interval. The GRSM vegetation mapping project delivers many geospatial and vegetation data products, including an in-depth project report discussing methods and results, which includes map classification and map-class descriptions. This suite of products also includes descriptions and a field key to vegetation types; a database of vegetation plots, verification sites, and AA sites; digital images of field sites; field data sheets; digital aerial imagery; hardcopy and digital maps; a geodatabase of vegetation and land cover (map layer), field sites (vegetation plots, verification sites, and AA sites), aerial imagery index, project boundary, and metadata; and a contingency table listing AA results. Geospatial products are projected in the Universal Transverse Mercator, Zone 17 North, by using the North American Datum of 1983. Information on the NPS VMI Program and completed mapping projects are on the internet at https://www.nps.gov/im/vegetation-inventory.htm.

North Carolina, Tennessee↗
USGS2021

Multiple in-stream stressors degrade biological assemblages in five U.S. regions

Biological assemblages in streams are affected by a wide variety of physical and chemical stressors associated with land-use development, yet the importance of combinations of different types of stressors is not well known. From 2013 to 2017, the U.S. Geological Survey completed multi-stressor/multi-assemblage stream ecological assessments in five regions of the United States (434 streams total). Diatom, invertebrate, and fish communities were enumerated, and five types of potential stressors were quantified: habitat disturbance, excess nutrients, high flows, basic water quality, and contaminants in water and sediment. Boosted regression tree (BRT) models for each biological assemblage and region generally included variables from all five stressor types and multiple stressors types in each model was the norm. Classification and regression tree (CART) models then were used to determine thresholds for each BRT model variable above which there appeared to be adverse effects (multi-metric index (MMI) models only). In every region and assemblage there was a significant inverse relation between the MMI and the number of stressors exerting potentially adverse effects. The number of elevated instream stressors often varied substantially for a given level of land-use development and the number of elevated stressors was a better predictor of biological condition than was development. Using the adverse effects-levels that were developed based on the BRT model results, 68% of the streams had two or more stressors with potentially adverse effects and 35% had four or more. Our results indicate that relatively small increases in the number of stressors of different types can have a large effect on a stream ecosystem.

Science of the Total Environment↗