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Determining the importance of model calibration for forecasting absolute/relative changes in streamflow from LULC and climate changes

Land use/land cover (LULC) and climate changes are important drivers of change in streamflow. Assessing the impact of LULC and climate changes on streamflow is typically done with a calibrated and validated watershed model. However, there is a debate on the degree of calibration required. The objective of this study was to quantify the variation in estimated relative and absolute changes in streamflow associated with LULC and climate changes with different calibration approaches. The Soil and Water Assessment Tool (SWAT) was applied in an uncalibrated (UC), single outlet calibrated (OC), and spatially-calibrated (SC) mode to compare the relative and absolute changes in streamflow at 14 gaging stations within the Santa Cruz River Watershed in southern Arizona, USA. For this purpose, the effect of 3 LULC, 3 precipitation (P), and 3 temperature (T) scenarios were tested individually. For the validation period, Percent Bias (PBIAS) values were >100% with the UC model for all gages, the values were between 0% and 100% with the OC model and within 20% with the SC model. Changes in streamflow predicted with the UC and OC models were compared with those of the SC model. This approach implicitly assumes that the SC model is “ideal”. Results indicated that the magnitude of both absolute and relative changes in streamflow due to LULC predicted with the UC and OC results were different than those of the SC model. The magnitude of absolute changes predicted with the UC and SC models due to climate change (both P and T) were also significantly different, but were not different for OC and SC models. Results clearly indicated that relative changes due to climate change predicted with the UC and OC were not significantly different than that predicted with the SC models. This result suggests that it is important to calibrate the model spatially to analyze the effect of LULC change but not as important for analyzing the relative change in streamflow due to climate change. This study also indicated that model calibration in not necessary to determine the direction of change in streamflow due to LULC and climate change.

Santa Cruz River Watershed↗

Linking urbanization to the Biological Condition Gradient (BCG) for stream ecosystems in the Northeastern United States using a Bayesian network approach

Urban development alters important physical, chemical, and biological processes that define urban stream ecosystems. An approach was developed for quantifying the effects of these processes on aquatic biota, and then linking those effects to endpoints that can be used for environmental management. These complex, interacting systems are challenging to model from a scientific standpoint. A desirable model clearly shows the system, simulates the interactions, and ultimately predicts results of management actions. Traditional regression techniques that calculate empirical relations between pairs of environmental factors do not capture the interconnected web of multiple stressors, but urban development effects are not yet understood at the detailed scales required to make mechanistic modeling approaches feasible. Therefore, in contrast to a fully deterministic or fully statistical modeling approach, a Bayesian network model provides a hybrid approach that can be used to represent known general associations between variables while acknowledging uncertainty in predicted outcomes. It does so by quantifying an expert-elicited network of probabilistic relations between variables. Advantages of this modeling approach include (1) flexibility in accommodating many model specifications and information types; (2) efficiency in storing and manipulating complex information, and to parameterize; and (3) transparency in describing the relations using nodes and arrows and in describing uncertainties with discrete probability distributions for each variable. In realization of the aforementioned advantages, a Bayesian network model was constructed to characterize the effect of urban development on aquatic macroinvertebrate stream communities through three simultaneous, interacting ecological pathways affecting stream hydrology, habitat, and water quality across watersheds in the Northeastern United States. This model incorporates both empirical data and expert knowledge to calculate the probabilities of attaining desired aquatic ecosystem conditions under different urban stress levels, environmental conditions, and management options. Ecosystem conditions are characterized in terms of standardized Biological Condition Gradient (BCG) management endpoints. This approach to evaluating urban development-induced perturbations in watersheds integrates statistical and mechanistic perspectives, different information sources, and several ecological processes into a comprehensive description of the system that can be used to support decision making. The completed model can be used to infer which management actions would lead to the highest likelihood of desired BCG tier achievement. For example, if best management practices (BMP) were implemented in a highly urbanized watershed to reduce flashiness to medium levels and specific conductance to low levels, the stream would have a 70-percent chance of achieving BCG Tier 3 or better, relative to a 24-percent achievement likelihood for unmanaged high urban land cover. Results are reported probabilistically to account for modeling uncertainty that is inherent in sources such as natural variability and model simplification error.

Scientific Investigations Report↗

Evidence of nitrate attenuation in intertidal and subtidal groundwater in a subterranean estuary at a Cape Cod embayment, East Falmouth, Massachusetts, 2015–16

Nitrogen dynamics in intertidal and nearshore subtidal groundwater (subterranean estuary) adjacent to the Seacoast Shores peninsula, Falmouth, Massachusetts, were investigated during 2015–16 by the U.S. Geological Survey. The peninsula is a densely populated residential area with septic systems and cesspools that are substantial sources of nitrogen to groundwater. The study area is in the Eel River, an estuarine saltwater embayment connected to the ocean adjacent to the western shore of the peninsula, that was the subject of an earlier study by Colman and others (2018, https://doi.org/10.3133/sir20185095 ) on nitrogen transport and transformations in groundwater between onshore and offshore locations. The previous study documented the distribution of nitrate concentrations and nitrate attenuation reactions in fresh groundwater beneath the peninsula and the estuary. The current study extended those observations with more detailed sampling and analysis of shallow groundwater from wells near discharge sites beneath the estuary. The current field investigation included sampling of existing wells and installation and sampling of clusters of wells and temporary sampling points in the subterranean estuary, including (1) shallow transects 0.3 to 1.2 meters (m) deep extending from 1 to 13.5 m offshore and (2) deeper wells (from 1.83 to 4.88 m deep) extending from 4.3 to 14.3 m offshore. Measurements of hydraulic-head gradients 2–5 m below the sediment/water interface in the intertidal and nearshore subtidal zones indicated that groundwater flow generally was upwards (towards the estuary) under all tide conditions in October 2016. The magnitude of the gradient was greatest during low tide conditions, indicating that groundwater discharge likely decreased during high tides. Measurements of specific conductance in shallow groundwater in the subterranean estuary in three transects perpendicular to shore were consistent with the existence of saltwater flow cells (infiltration of overlying saline water, mixing with fresh groundwater, and discharge to the overlying saline water) in the intertidal and nearshore subtidal regions. The size of these flow cells was variable in space and time and dependent on the elevation of the tide (spring or neap). At this location in the Eel River subterranean estuary, and offshore to at least 13.5 m, offshore flow of fresh groundwater apparently prevented a deeper saltwater wedge from discharging to the surface. Nitrate concentrations in shallow groundwater (30 to 122 centimeters [cm] depth) were variable in space and time, ranging from not detectable to 600 micromoles per liter (μmol/L) (8.4 milligrams per liter as N), and were highest in June 2016 at depths from 61 to 122 cm below the sediment/water interface and from 4 to 9 m offshore. Nitrate generally was not detectable in saline shallow groundwater at 30-cm depth or at any depth from 30 to 122 cm from 10 to 13.5 m offshore. Dissolved oxygen concentrations were suboxic (less than 16 μmol/L) in 60 percent of the sampled subterranean groundwater beneath the intertidal and subtidal zones. In the remaining sites, the range of dissolved oxygen concentrations was from 18 to 272 μmol/L and the median concentration was 43 μmol/L. Evidence for microbial nitrate reduction (denitrification and possibly anammox) was provided by the distribution of the reaction product nitrogen gas (excess N 2 , or N 2MIC ), as determined from analysis of the dissolved nitrogen gas and argon gas (Ar) concentrations in groundwater samples. Excess nitrogen gas provided evidence for nitrate reduction in shallow groundwater below the subtidal and, to a lesser extent, intertidal zones adjacent to the Seacoast Shores peninsula. These zones, where evidence for nitrate reduction was detected, were in fresh and brackish groundwater near subtidal or intertidal saltwater cells where discharging fresh groundwater mixed with infiltrating saline water. Infiltrating seawater may have supplied organic carbon, one of several potential electron donors that are required for denitrification. Other potential electron donors, such as organic carbon, iron, manganese, hydrogen, methane, ammonium, elemental sulfur, or sulfide phases, may have been supplied by the estuarine sediments. Drainage from surface runoff near the shore also may have supplied organic carbon to fresh groundwater near the intertidal saltwater cell. The highest amounts of nitrate converted to excess nitrogen gas were estimated to be in the range of 230 to 430 μmol/L in nearly fresh groundwater near the subtidal saltwater cell at depths of 61 to 122 cm below the sediment/water interface and from 10 to 13.5 m offshore. Evidence of denitrification within 10 m of the shore was sparse (generally limited to less than 50 μmol/L of N 2 -N) despite the presence of high nitrate concentrations. The spatial distribution of estimated nitrate reduction in the intertidal and nearshore subtidal fresh and brackish groundwater may be related to local variability in the distribution of reactive electron donors in those zones. Variations in the amount of nitrate reduction to nitrogen gas were not clearly related to potential aqueous electron donors such as dissolved organic carbon, nor to potential reaction products such as alkalinity, but may have been controlled by combinations of aqueous and solid-phase reactants. The distribution of relatively shallow fresh groundwater containing nitrate could indicate potential nitrate discharge areas in the lower intertidal zone and uncertain locations farther offshore; however, the data did not extend all the way to the sediment/water interface or to the offshore freshwater limit. This study confirmed substantial loss of nitrate from some of the fresh and brackish groundwater in shallow subestuarine sediments prior to discharge but did not quantify how much nitrate eventually discharged to the estuary.

Massachusetts↗

Analysis of land use change in urban environments

Metropolitan areas in the United States are growing at unprecedented rates, creating extensive urban landscapes. Many of the farmlands, wetlands, forests, and deserts that formed the America of 1900 have been transformed during the past 100 years into human settlements. Almost everyone has seen these changes to their local environment but without a clear understanding of their impacts. It is not until we study these landscapes from a spatial perspective and the time scale of decades that we can begin to measure the changes that have occurred and predict the impact of changes to come. The U.S. Geological Survey's (USGS) Urban Dynamics Research (UDR) program studies the landscape transformations that result from the growth of metropolitan regions over time. Using sources such as historic maps, aerial photographs, and Landsat satellite data, USGS scientists first assemble retrospective urban land use databases that reflect several decades of change. These databases are then used to analyze the effects of urbanization on the landscape, and to model urban growth and land use change under alternative growth scenarios.

Fact Sheet↗

Developing an outcome-based biodiversity metric in support of the field to market project: Final report

Our objective was to create a metric that would calculate the relative impact of common commercial agricultural practices on terrestrial vertebrate richness. We sought to define impacts in fields (including field borders) of the southeastern region’s commercial production of corn, wheat, soy, and cotton. The metric is intended to serve as an educational tool, allowing producers to see how operational decisions made at the field level impact overall vertebrate species richness and to explore decision impacts to targeted species groups (e.g. game, pest, or beneficial species). Agricultural landscapes are often mistakenly thought to be unsuitable habitat for most species. However, as demonstrated by results reported here, even large-scale, conventional agricultural producers are potentially important partners in biodiversity conservation. Many vertebrate species do inhabit agricultural landscapes, benefitting from the provision of water, food, or shelter within cultivated fields and their immediate borders (e.g., Holland et al. 2012). In the Southeastern US, of the 613 terrestrial vertebrate species modeled by the Southeast Gap Analysis Program (SEGAP) (http://www.basic.ncsu.edu/segap/index.html), 263 utilize row crop and associated agricultural land cover classes as potential habitat (Box 1). While some species may be sensitive to certain operational practices (e.g., tillage, pest management, or field border management practices), others are generally tolerant, and some may benefit either directly or indirectly. For example, field margins and ditches often serve as semi-natural habitats providing foraging resources and shelter for vertebrates and are shown to positively influence species richness and abundance (Billeter et al. 2007; Herzon & Helenius 2008; Marshall & Moonen 2002; Shore et al. 2005; Weibull et al. 2003; Wuczyńskia et al. 2011). Biodiversity responses are, therefore, complex, as an individual species’ responses to agricultural production practices depends on that animal’s resource specialization, mobility, and life history strategies (Jeanneret et al. 2003a, b; Jennings & Pocock 2009). The knowledge necessary to define the biodiversity contribution of agricultural lands is specialized, dispersed, and nuanced, and thus not readily accessible. Given access to clearly defined biodiversity tradeoffs between alternative agricultural practices, landowners, land managers and farm operators could collectively enhance the conservation and economic value of agricultural landscapes. Therefore, Field to Market: The Keystone Alliance for Sustainable Agriculture and The Nature Conservancy jointly funded a pilot project to develop a biodiversity metric to integrate into Field to Market’s existing sustainability calculator, The Fieldprint Calculator (http://www. fieldtomarket.org/). Field to Market: The Keystone Alliance for Sustainable Agriculture is an alliance among producers, agribusinesses, food companies, and conservation organizations seeking to create sustainable outcomes for agriculture. The Fieldprint Calculator supports the Keystone Alliance’s vision to achieve safe, accessible, and nutritious food, fiber and fuel in thriving ecosystems to meet the needs of 9 billion people in 2050. In support of this same vision, our project provides proof-of-concept for an outcome-based biodiversity metric for Field to Market to quantify biodiversity impacts of commercial row crop production on terrestrial vertebrate richness. Little research exists examining the impacts of alternative commercial agricultural practices on overall terrestrial biodiversity (McLaughlin & Mineau 1995). Instead, most studies compare organic versus conventional practices (e.g. Freemark & Kirk 2001; Wickramasinghe et al. 2004), and most studies focus on flora, avian, or invertebrate communities (Jeanneret et al. 2003a; Maes et al. 2008; Pollard & Relton 1970). Therefore, we used an expert-knowledge-based approach to develop a metric that predicts expected impacts to shelter and forage resources, individual species, and overall biodiversity (species richness). This approach is modeled after an ecosystems services concept (WRI 2005), except that we examine services (i.e., resources) provided to vertebrate wildlife rather than service provided to the human population. SEGAP predicts species that are potentially present in an area given landscape-scale habitat availability, configuration, and context (e.g., patch size, proximity to resources, connectivity, potential for disturbance). Based on the prediction of species that may be potentially present, the impacts of management decisions within fields and around their borders can be analyzed based on the impact of those practices to the availability of species’ resources. The final metric provides an index of a producer’s relative impact, but perhaps even more importantly, the underlying database allows producers to explore details such as which species are most impacted or how alternative decisions would impact their score.

Technical Bulletin↗

Observed correlation between the depth to base and top of gas hydrate occurrence from review of global drilling data

A global inventory of data from gas hydrate drilling expeditions is used to develop relationships between the base of structure I gas hydrate stability, top of gas hydrate occurrence, sulfate-methane transition depth, pressure (water depth), and geothermal gradients. The motivation of this study is to provide first-order estimates of the top of gas hydrate occurrence and associated thickness of the gas hydrate occurrence zone for climate-change scenarios, global carbon budget analyses, or gas hydrate resource assessments. Results from publicly available drilling campaigns (21 expeditions and 52 drill sites) off Cascadia, Blake Ridge, India, Korea, South China Sea, Japan, Chile, Peru, Costa Rica, Gulf of Mexico, and Borneo reveal a first-order linear relationship between the depth to the top and base of gas hydrate occurrence. The reason for these nearly linear relationships is believed to be the strong pressure and temperature dependence of methane solubility in the absence of large difference in thermal gradients between the various sites assessed. In addition, a statistically robust relationship was defined between the thickness of the gas hydrate occurrence zone and the base of gas hydrate stability (in meters below seafloor). The relationship developed is able to predict the depth of the top of gas hydrate occurrence zone using observed depths of the base of gas hydrate stability within less than 50 m at most locations examined in this study. No clear correlation of the depth to the top and base of gas hydrate occurrences with geothermal gradient and sulfate-methane transition depth was identified.

Geochemistry, Geophysics, Geosystems↗

A deposit model for magmatic iron-titanium-oxide deposits related to Proterozoic massif anorthosite plutonic suite

This descriptive model for magmatic iron-titanium-oxide (Fe-Ti-oxide) deposits hosted by Proterozoic age massif-type anorthosite and related rock types presents their geological, mineralogical, geochemical, and geoenvironmental attributes. Although these Proterozoic rocks are found worldwide, the majority of known deposits are found within exposed rocks of the Grenville Province, stretching from southwestern United States through eastern Canada; its extension into Norway is termed the Rogaland Anorthosite Province. This type of Fe-Ti-oxide deposit dominated by ilmenite rarely contains more than 300 million tons of ore, with between 10- to 45-percent titanium dioxide (TiO 2 ), 32- to 45-percent iron oxide (FeO), and less than 0.2-percent vanadium (V). The origin of these typically discordant ore deposits remains as enigmatic as the magmatic evolution of their host rocks. The deposits clearly have a magmatic origin, hosted by an age-constrained unique suite of rocks that likely are the consequence of a particular combination of tectonic circumstances, rather than any a priori temporal control. Principal ore minerals are ilmenite and hemo-ilmenite (ilmenite with extensive hematite exsolution lamellae); occurrences of titanomagnetite, magnetite, and apatite that are related to this deposit type are currently of less economic importance. Ore-mineral paragenesis is somewhat obscured by complicated solid solution and oxidation behavior within the Fe-Ti-oxide system. Anorthosite suites hosting these deposits require an extensive history of voluminous plagioclase crystallization to develop plagioclase-melt diapirs with entrained Fe-Ti-rich melt rising from the base of the lithosphere to mid- and upper-crustal levels. Timing and style of oxide mineralization are related to magmatic and dynamic evolution of these diapiric systems and to development and movement of oxide cumulates and related melts. Active mines have developed large open pits with extensive waste-rock piles, but because of the nature of the ore and waste rock, the major environmental impacts documented at the mine sites are reported to be waste disposal issues and somewhat degraded water quality.

Scientific Investigations Report↗

A deposit model for magmatic iron-titanium-oxide deposits related to Proterozoic massif anorthosite plutonic suites

This descriptive model for magmatic iron-titanium-oxide (Fe-Ti-oxide) deposits hosted by Proterozoic age massif-type anorthosite and related rock types presents their geological, mineralogical, geochemical, and geoenvironmental attributes. Although these Proterozoic rocks are found worldwide, the majority of known deposits are found within exposed rocks of the Grenville Province, stretching from southwestern United States through eastern Canada; its extension into Norway is termed the Rogaland Anorthosite Province. This type of Fe-Ti-oxide deposit dominated by ilmenite rarely contains more than 300 million tons of ore, with between 10- to 45-percent titanium dioxide (TiO 2 ), 32- to 45-percent iron oxide (FeO), and less than 0.2-percent vanadium (V). The origin of these typically discordant ore deposits remains as enigmatic as the magmatic evolution of their host rocks. The deposits clearly have a magmatic origin, hosted by an age-constrained unique suite of rocks that likely are the consequence of a particular combination of tectonic circumstances, rather than any a priori temporal control. Principal ore minerals are ilmenite and hemo-ilmenite (ilmenite with extensive hematite exsolution lamellae); occurrences of titanomagnetite, magnetite, and apatite that are related to this deposit type are currently of less economic importance. Ore-mineral paragenesis is somewhat obscured by complicated solid solution and oxidation behavior within the Fe-Ti-oxide system. Anorthosite suites hosting these deposits require an extensive history of voluminous plagioclase crystallization to develop plagioclase-melt diapirs with entrained Fe-Ti-rich melt rising from the base of the lithosphere to mid- and upper-crustal levels. Timing and style of oxide mineralization are related to magmatic and dynamic evolution of these diapiric systems and to development and movement of oxide cumulates and related melts. Active mines have developed large open pits with extensive waste-rock piles, but because of the nature of the ore and waste rock, the major environmental impacts documented at the mine sites are reported to be waste disposal issues and somewhat degraded water quality.

Scientific Investigations Report↗

Plant community composition and biomass in Gulf Coast Chenier Plain marshes: Responses to winter burning and structural marsh management

Many marshes in the Gulf Coast Chenier Plain, USA, are managed through a combination of fall or winter burning and structural marsh management (i.e., levees and water control structures; hereafter SMM). The goals of winter burning and SMM include improvement of waterfowl and furbearer habitat, maintenance of historic isohaline lines, and creation and maintenance of emergent wetlands. Although management practices are intended to influence the plant community, effects of these practices on primary productivity have not been investigated. Marsh processes, such as vertical accretion and nutrient cycles, which depend on primary productivity may be affected directly or indirectly by winter burning or SMM. We compared Chenier Plain plant community characteristics (species composition and above- and belowground biomass) in experimentally burned and unburned control plots within impounded and unimpounded marshes at 7 months (1996), 19 months (1997), and 31 months (1998) after burning. Burning and SMM did not affect number of plant species or species composition in our experiment. For all three years combined, burned plots had higher live above-ground biomass than did unburned plots. Total above-ground and dead above-ground biomasses were reduced in burned plots for two and three years, respectively, compared to those in unburned control plots. During all three years, belowground biomass was lower in impounded than in unimpounded marshes but did not differ between burn treatments. Our results clearly indicate that current marsh management practices influence marsh primary productivity and may impact other marsh processes, such as vertical accretion, that are dependent on organic matter accumulation and decay.

Environmental Management↗

Instream flow characterization of Upper Salmon River basin streams, central Idaho, 2005

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream of the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the ESA-listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications resulting from irrigation practices, have directly affected quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include collection of habitat and streamflow information for the Physical Habitat Simulation System (PHABSIM) model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model simulation results can be used by resource managers to guide habitat restoration efforts by evaluating potential fish habitat and passage improvements by increasing or decreasing streamflow. In 2005, instream flow characterization studies were completed on Big Boulder, Challis, Bear, Mill, and Morgan Creeks. Continuous streamflow data were recorded upstream of all diversions on Big Boulder. Instantaneous measurements of discharge were also made at selected sites. In addition, natural summer streamflows were estimated for each study site using regional regression equations. This report describes PHABSIM modeling results for bull trout, Chinook salmon, and steelhead trout during summer streamflows. Habitat/discharge relations were summarized for adult and spawning life stages at each study site. In addition, streamflow needs for riffle dwelling invertebrate taxa (Ephemeroptera, Plecoptera, and Trichoptera) are presented. Adult fish passage and discharge relations were evaluated at specific transects that were identified as potential low-streamflow passage barriers at each study site. Continuous summer water temperature data for selected study sites were summarized and compared with Idaho Water Quality Standards and various water temperature requirements of targeted fish species. Results of these habitat studies can be used to prioritize and direct cost-effective actions to improve fish habitat for ESA-listed anadromous and native fish species in the basin. These actions may include acquiring water during critical low-flow periods by leasing or modifying irrigation delivery systems to minimize out-of-stream diversions.

Idaho↗

The Baltic Macoma: abundance and distribution of an important winter food of diving ducks in Chesapeake Bay

Poor water quality and widespread depletion of wild celery (Vallisneria americana) and other submerged aquatic plants important as waterfowl foods has resulted in the continued dependence of canvasbacks (Aythya valisineria) on Baltic clams (Macoma balthica) as their primary winter food. Despite this dependence, no information exists regarding the distribution and abundance of Baltic clams, and changes that occur in Baltic clam populations over time. We conducted benthic surveys to determine the distribution and abundance of Macoma balthica and M. mitchelli in major tributaries of the upper and middle Chesapeake Bay. Tributaries sampled included the Chester River south to Monie Bay on the Eastern Shore, and Middle River to the Potomac River on the western shore of Maryland. Data on depth, bottom type, shellfish, and submerged aquatic vegetation were recorded. The Baltic clam had the highest frequency of occurrence (50%), followed by M. mitchelli (36%). Other species of clams occurred in less than 14% of the 2995 sites sampled. In addition, every third month since June 1991, we have studied seasonal changes in Baltic clam abundance and recruitment at 13 high abundance sites. Recruitment was recorded at only one high density site (97% increase) between June and September transect surveys. Clam length histograms clearly indicated a new year class and depletion of older cohorts. Average summer decline in Baltic clam abundance at the other 12 sites was 59% and ranged from -11% to -97%. Based on clam length, younger cohorts were depleted at a higher rate. More than half of the Baltic clam population was depleted during the summer and spring recruitment was low.

Book chapter↗

Crystalline-rock ejecta and shocked minerals of the Chesapeake Bay impact structure, USGS-NASA Langley core, Hampton, Virginia, with supplemental constraints on the age of impact

The USGS-NASA Langley corehole at Hampton , Va., was drilled 2000 as the first in a series of new coreholes drilled in the late Eocene Chesapeake Bay impact structure to gain a comprehensive understanding of its three-dimensional character. This understanding is important for assessing ground-water resources in the region, as well as for learning about marine impacts on Earth. We studied crystalline-rock ejecta and shock-metamorphosed minerals from the Langley core to determine what they reveal about the geology of crystalline rocks beneath the Atlantic Coastal Plain and how those rocks were affected by the impact . An unusual polymict diamicton, informally called the Exmore beds (upper Eocene), is 33.8 meters (m; 110.9 feet (ft)) thick and lies at a depth of 269.4 to 235.65 m (884.0 to 773.12 ft) in the core . This matrix-supported sedimentary deposit contains clasts of Tertiary and Cretaceous sediment (ranging up to boulder size) and sparse pebbles of crystalline rock . The matrix consists of muddy sand that contains abundant quartz grains and minor glauconite and potassium feldspar. Significantly, the sandy matrix of the Exmore beds contains sparse quartz grains (0.1 to 0.3 millimeter (0.004 to 0.012 inch) in diameter) that contain multiple sets of intersecting planar deformation features formerly referred to as shock lamellae. As many as five different sets have been observed in some quartz grains. Planar deformation features also occur in quartz grains in reworked crystalline-rock clasts in the Exmore beds. Such grains are clearly of shock-metamorphic origin. The presence of these features indicates that the quartz grains have experienced pressures greater than 6 gigapascals (GPa) and strain rates greater than 10 6 /second. Thus, the shock-metamorphosed quartz grains, although rare, provide clear and convincing evidence that the Exmore beds are of hybrid impact origin. Identification of shocked quartz grains in the Langley core adds to the number of sites in the structure where their presence is confirmed. Most of the clasts of crystalline rock that are in and just below the Exmore beds are rounded, detrital, and typical of coastal plain sediments. However, a few have angular shapes and consist of cataclastically deformed felsite having aphanitic-porphyritic to aphanitic texture and peraluminous rhyolite composition. Three of these clasts contain quartz grains that display two sets of planar deformation features of shock-metamorphic origin. Shock-metamorphosed quartz is an integral part of the cataclastic fabric in these three clasts, indicating that both the fabric and the shocked quartz were produced by the same high-energy impact event. Some felsite clasts have spherulitic textures that may be features either of an impact melt or of preimpact volcanic rocks. A weighted-mean total-fusion 40 Ar/ 39 Ar age of 35.3±0.1 Ma (±lσ) for 19 analyses of 4 North American tektites records the age of the late Eocene Chesapeake Bay impact event.

Chesapeake Bay↗

Sedimentary facies of iron-formation

The sedimentary iron -formations of Precambrian age in the Lake Superior region can be divided on the basis of the dominant original iron mineral into four principal facies : sulfide, carbonate, oxide, and silicate. As chemical sediments, these rocks reflect certain aspects of the chemistry of the depositional environments. The major control, at least for the sulfide, carbonate, and oxide types, probably was the oxidation potential. The evidence indicates that deposition took place in restricted basins, which were separated from the open sea by thresholds that inhibited free circulation and permitted development of abnormalities in oxidation potential and water composition. The sporadic distribution of metamorphism and of later oxidation permits description of the primary facies on the basis of unoxidized, essentially unmetamorphosed material. The sulfide facies is represented by black slates in which pyrite may make up as much as 40 percent of the rock. The free-carbon content of these rocks typically ranges from 5 to 15 percent, indicating that ultra-stagnant conditions prevailed during deposition. Locally, the pyritic rocks contain layers of iron -rich carbonate. The carbonate facies consists, in its purer form, of interbedded iron -rich carbonate and chert. It is a product of an environment in which oxygen concentration was sufficiently high to destroy most of the organic material but not high enough to permit formation of ferric compounds. The oxide facies is found as two principal types, one characterized by magnetite and the other by hematite. Both minerals appear to be of primary origin. The magnetite-banded rock is one of the dominant lithologies in the region; it consists typically of magnetite interlayered with chert, carbonate, or iron silicate, or combinations of the three. Its mineralogy and association suggest origin under weakly oxidizing to moderately reducing conditions, but the mode of precipitation of magnetite is not clearly understood. The hematite-banded rocks consist of finely crystalline hematite interlayered with chert or jasper. Oolitic structure is common. This facies doubtless accumulated in a strongly oxidizing, probably near-shore, environment similar to that in which younger hema-titic ironstones such as the Clinton oolite were deposited. The silicate facies contains one or more of the hydrous ferrous silicates (greenalite, minnesotaite, stilpnomelane, chlorite) as a major constituent. Granule structure, similar to that of glauconite, is typical of some varieties; others are nongranular and finely laminated. The most common association of the silicate rocks is with either carbonate- or magnetite-bearing rocks, which suggests that the optimum conditions for deposition ranged from slightly oxidizing to slightly reducing. The relationship between the iron -rich rocks and volcanism, stressed by many authors, is considered by the writer to be structural, not chemical: in the Lake Superior region both iron -deposition and volcanism are believed to be related to geosynclinal development during Huronian time. In Michigan, the lower Huronian rocks are iron -poor quartzite and dolomite-typical "stable-shelf" deposits; much of the upper Huronian consists of iron -poor graywacke and slate with associated volcanic rocks -a typical "geosynclinal" assemblage. Thus the iron -rich beds of the middle Huronian and lower part of the upper Huronian were deposited during a transitional stage in structural history. The major environmental requirement for deposition of iron - formation is the closed or restricted basin; this requirement coincides in time with what would be a normal stage in evolution of the geosyncline: namely, structural development of offshore buckles or swells that subsequently develop into island arcs characterized by volcanism.

Lake Superior↗

Geology and water resources of the northern portion of the Black Hills and adjoining regions in South Dakota and Wyoming

This paper, which supplements the report on the geology and water resources of the southern half of the Black Hills, published in 1901, is the result of studies made at intervals during the years 1899 to 1907. It relates to an area of about 7,500 square miles, situated about half in South Dakota and half in the northeast corner of Wyoming (Pl. II), and covering the northern half of the Black Hills uplift and a wide area of adjacent plains. The report describes the geology of the sedimentary rocks - their stratigraphy, structure, and history - and discusses their mineral resources, including underground water, coal, gypsum, etc. It also contains information respecting surface waters available for irrigation and stock raising, timber, climate, and the history of the topographic development of the region. The crystalline rocks of the central portion of the Black Hills area and the various igneous rocks of later age are shown on some of the accompanying maps but without differentiation, as the study of their geology was not within the scope of the investigation; neither are their mineral resources considered here, for these are treated in other publications. In the field work I have been assisted mainly by Prof. C. C. O'Harra, of the School of Mines at Rapid, who has mapped the geology of large areas about Aladdin, the Devils Tower, Belle Fourche, and Rapid. Dr. W. S. Tangier Smith has mapped portions of the Bear Lodge and Nigger Hill uplifts, and Mr. C. A. Fisher has assisted in portions of the work. The geology of the region from Sturgis to a point beyond Spearfish Canyon was mapped by Prof. T. A. Jaggar, jr., with the assistance of Mr. J. M. Boutwell, in 1898 and 1899. It is desirable to repeat here the statement made in my previous report that all who study the geology of the Black Hills must feel impressed by the remarkably clear general conceptions of the geologic relations of this region afforded by the survey made by Mr. Henry Newton over a quarter of a century ago. In one short season, with many unfavorable conditions for traveling, he determined most of the broader features and recorded many of the essential details. His posthumous report, edited by Mr. G. K. Gilbert, will always remain a standard work on Black Hills geology. Later studies have added greatly to our knowledge of the details of the stratigraphy and structure, the distribution of the rocks and minerals, and the age of the beds, and have afforded means for a more complete elucidation of the geologic history, especially the physiographic development of the Black Hills region.

South Dakota, Wyoming↗

Geochemical assessment of metals and dioxin in sediment from the San Carlos Reservoir and the Gila, San Carlos, and San Francisco Rivers, Arizona

In October 2004, we sampled stream-bed sediment, terrace sediment, and sediment from the San Carlos Reservoir to determine the spatial and chronological variation of six potentially toxic metals-Cu, Pb, Zn, Cd, As, and Hg. Water levels in the San Carlos Reservoir were at a 20-year low at an elevation of 2,409 ft (734.3 m). Four cores were taken from the reservoir: one from the San Carlos River arm, one from the Gila River arm, and two from the San Carlos Reservoir just west of the Pinal County line. Radioisotope chronometry (7Be, 137Cs, and 210Pb) conducted on sediment from the reservoir cores provides a good chronological record back to 1959. Chronology prior to that, during the 1950s, is based on our interpretation of the 137Cs anomaly in reservoir cores. During and prior to the 1950s, the reservoir was dry and sediment-accumulation rates were irregular; age control based on radioisotope data was not possible. We recovered sediment at the base of one 4-m-long core that may date back to the late 1930s. The sedimentological record contains two discrete events, one about 1978-83 and one about 1957, where the Cu concentration in reservoir sediment exceeded recommended sediment quality guidelines and should have had an effect on sensitive aquatic and benthic organisms. Concentrations of Zn determined in sediment deposited during the 1957(?) event also exceeded recommended sediment quality guidelines. Concentration data for Cu from the four cores clearly indicate that the source of this material was upstream on the Gila River. Lead isotope data, coupled with the geochemical data from a 2M HCl-1 percent H2O2 leach of selected sediment samples, show two discrete populations of data. One represents the dominant sediment load derived from the Safford Valley, and a second reflects sediment derived from the San Francisco River. The Cu concentration spikes in the reservoir cores have chemical and Pb isotope signatures that indicate that deposits in a porphyry copper deposit from the Morenci district is the likely source of these Cu-rich sedimentary deposits. Copper concentrations and Pb isotope data in premining terrace-sediment deposits indicate that the Cu peaks could not have resulted from erosion of premining sediment from terrace deposits downstream on the Gila River. The chemical and Pb isotope data also indicate that agricultural practices in the Safford Valley have resulted in an increased sediment load to the Gila River since large-scale farming began, prior to the time when the San Carlos Reservoir was built. Analyses of dioxin, which is an impurity in one of the herbicides used in the late 1960s and early 1970s, were completed in sediment from one of the cores in the reservoir to determine whether any of these pesticide residues have accumulated in the reservoir sediment. Dioxin concentration is expressed in terms of its toxicity (toxic equivalent concentration or TEQ). Concentrations of dioxin in the sediment ranged from 0.68 to 1.37 pg/g and are less than any of the benchmark concentrations recommended as threshold values for adverse effects of dioxin in sediment (> 2.5-10 pg/g).

Scientific Investigations Report↗

The composition of fluid inclusions in ore and gangue minerals from the Silesian-Cracow Mississippi Valley-type Zn-Pb deposits Poland: Genetic and environmental implications

The composition of fluids extracted from ore and gangue sulfide minerals that span most of the paragenesis of the Silesian-Cracow district was determined using a newly developed ion chromatographic (IC) technique. Ionic species determined were Na+, NH+4, Ca2+, Mg2+, K+, Rb+, Sr2+, Ba2+, Cl-, Br-, F-, I-, PO3-4, CO2-3, HS-, S2O2-3, SO2-4, NO-3, and acetate. Mineral samples included six from the Pomorzany mine and one from the Trzebionka mine which are hosted in the Triassic Muschelkalk Formation, and two samples of drill core from mineralized Upper Devonian strata. Nine paragenetically identifiable sulfide minerals occur throughout the Silesian-Cracow district. These include from earliest to latest: early iron sulfides, granular sphalerite, early galena, light-banded sphalerite, galena, dark-banded sphalerite, iron sulfides, late dark-banded sphalerite with late galena, and late iron sulfides. Seven of the minerals were sampled for fluid inclusion analysis in this study. Only the early iron sulfides and the last galena stage were not sampled. Although the number of analyses are limited to nine samples and two replicates and there is uncertainty about the characteristics of the fluid inclusions analyzed, the data show clear temporal trends in the composition of the fluids that deposited these minerals. Fluid inclusions in minerals deposited later in the paragenesis have significantly more K+, Br-, NH+4, and acetate but less Sr2+ than those deposited earlier in the paragenesis. The later minerals are also characterized by isotopically lighter sulfur and significantly more Tl and As in the solid minerals. The change in ore-fluid chemistry is interpreted to reflect a major change in the hydrologic regime of the district. Apparently, the migrational paths of ore fluids from the Upper Silesian basin changed during ore deposition and the fluids which deposited early minerals reacted with aquifers with very different geochemical characteristics than those that deposited late minerals. The early fluids may have reacted primarily with Devonian and Lower Carboniferous carbonate aquifers deeper in the basin, whereas the later fluids appear to have had extensive contact with organic-rich rocks, probably the shallower Middle and Upper Carboniferous flysch associated with coal measures. High concentrations of toxic Tl and As occur in the readily oxidized marcasite and pyrite minerals deposited by the later fluids. In general, the geochemistry of both the early and late fluids may be explained by an evaporite related origin or by water-rock modification of a saline basinal brine. When compared to the composition of fluid inclusions in Mississippi Valley-type (MVT) ore minerals from the Ozark region of the United States, fluid inclusions in minerals from Silesian-Cracow are fundamentally different, containing more Ca2+, Mg2+, NH+4, Br-, Sr2+ and acetate in all mineral stages with significantly more K+ in later stage minerals. The differences in ore fluid chemistry between the two regions are consistent with the lithologic differences of the respective basins thought to be the source of the mineralizing brines.

Prace - Panstwowego Instytutu Geologicznego↗

The ecology of the soft-bottom benthos of San Francisco Bay: a community profile

This profile, part of a series of profiles concerning coastal habitats of the United States, is a detailed examination of the soft-bottom benthos of San Francisco Bay. A U.S. Fish and Wildlife Service and California Department of Fish and Game report (1979) entitled "Protection and Restoration of San Francisco Bay Fish and Wildlife Habitat" provides clear recognition of the importance of intertidal and subtidal soft-bottom habitats and their associated organisms to the bay's birds and fishes and to the overall functioning of the estuary. The purpose of this profile is to provide a description of the structure and functioning of the benthic community in San Francisco Bay (exclusive of its tidal marshes, which are discussed by M. Josselyn [1983] in another profile). The habitats covered in this volume include all nonvegetated soft-bottom intertidal and subtidal areas of the bay between the Golden Gate and the mouths of the Sacramento and San Joaquin Rivers to the northeast, and to the southern extremity of the bay. The profile provides a reference to the scientific information concerning the animals and plants of the bay's benthic communities, their importance to the bay ecosystem, and their value as a resource measured in human terms. Because there have been few process-oriented studies of the benthos of San Francisco Bay (e.g., field and laboratory rate-measurement experiments), the material presented herein is largely descriptive. Nonetheless, we have described the processes that interconnect the various physical, chemical, and biological components of the benthic environment, and the important couplings between this environment and the water column above, with reference to research results from other estuaries where necessary. We consider the role of the benthic community as a food source for fish, aquatic birds, and humans; as a consumer or degrader of organic materials including wastes; as a recycler of minerals and nutrients; and as an accumulator of pollutants.

California↗

Apparatus and techniques for measuring bedload

The need for accurate determinations of the total sediment discharge of particles of bedload size has prompted this investigation of available and possible measuring apparatus and procedures. The accuracy of measurements of sediment discharge made with trap-type samplers is affected by the variability of sampler efficiency, by the oscillatory variation of bedload discharge, and by sampler placement. Equations that were developed for determining total discharge from measured bedioad discharge and measured suspended-sediment discharge are simplest if the bedload apparatus measures only the true bedload. Early bedload samplers are generally unsatisfactory. Recently developed or suggested apparatus include various improved samplers of the pressure-difference type, a pumping sampler, a magnetic sampler, acoustical instruments that measure the magnitude of the sound of particle collisions, an ultrasonic bedload sampler designed to measure and integrate electronically the concentration and velocity, and a tiltmeter designed to measure the total sediment discharge from the ground tilt that results from the passage of flow. All the pressure-difference samplers are improvements over early samplers, but none are void of the inherent shortcomings of trap-type apparatus; probably the Sphinx (Dutch) and VUV (Hungarian) samplers are the most satisfactory. The acoustical instruments are capable of measuring only the relative discharge. The ultrasonic sampler and the tiltmeter are not adequate without further development. Some new possible apparatus and means for measuring or aiding in measuring bedload discharge are small pit samplers, ultrasonic sounders, pressure transducers, and photography. A small pit sampler for measuring bedload discharge was designed to provide self-placement and portability ; however, its practicability and efficiency are undetermined. Exploratory films show that by using slowmotion photography the discharge of particles larger than about pea size can be determined provided the flow is clear; however, photography generally is not practical. Ultrasonic sounders provide continuous and accurate data on bed configuration and dune movement for use in equations that were developed for computing the bedload discharge. Computations with the equations indicate that the interpretation of the sounding data needs further study. Pressure transducers placed beneath the bed surface possibly can be used to provide information on dune movement; however, their installation would be difficult. The time required for collecting data on bed configuration and dune movement throughout a cross section could be substantially reduced by using several transducers simultaneously in conjunction with an ultrasonic sounder. A modified ultrasonic sounder that provides information on the shape and velocity of large particles and a method for determining the discharge of such particles were proposed; the method seems most feasible for particles of high sphericity.

Water Supply Paper↗