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A brief history and summary of the effects of river engineering and dams on the Mississippi River system and delta

The U.S. Geological Survey Forecast Mekong project is providing technical assistance and information to aid management decisions and build science capacity of institutions in the Mekong River Basin. A component of this effort is to produce a synthesis of the effects of dams and other engineering structures on large-river hydrology, sediment transport, geomorphology, ecology, water quality, and deltaic systems. The Mississippi River Basin (MRB) of the United States was used as the backdrop and context for this synthesis because it is a continental scale river system with a total annual water discharge proportional to the Mekong River, has been highly engineered over the past two centuries, and the effects of engineering have been widely studied and documented by scientists and engineers. The MRB is controlled and regulated by dams and river-engineering structures. These modifications have resulted in multiple benefits including navigation, flood control, hydropower, bank stabilization, and recreation. Dams and other river-engineering structures in the MRB have afforded the United States substantial socioeconomic benefits; however, these benefits also have transformed the hydrologic, sediment transport, geomorphic, water-quality, and ecologic characteristics of the river and its delta. Large dams on the middle Missouri River have substantially reduced the magnitude of peak floods, increased base discharges, and reduced the overall variability of intraannual discharges. The extensive system of levees and wing dikes throughout the MRB, although providing protection from intermediate magnitude floods, have reduced overall channel capacity and increased flood stage by up to 4 meters for higher magnitude floods. Prior to major river engineering, the estimated average annual sediment yield of the Mississippi River Basin was approximately 400 million metric tons. The construction of large main-channel reservoirs on the Missouri and Arkansas Rivers, sedimentation in dike fields, and protection of channel banks by revetments throughout the basin, have reduced the overall sediment yield of the MRB by more than 60 percent. The primary alterations to channel morphology by dams and other engineering projects have been (1) channel simplification and reduced dynamism; (2) lowering of channel-bed elevation; and (3) disconnection of the river channel from the flood plain, except during extreme flood events. Freshwater discharge from the Mississippi River and its associated sediment and nutrient loads strongly influence the physical and biological components in the northern Gulf of Mexico. Ninety percent of the nitrogen load reaching the Gulf of Mexico is from nonpoint sources with about 60 percent coming from fertilizer and mineralized soil nitrogen. Much of the phosphorus is from animal manure from pasture and rangelands followed by fertilizer applied to corn and soybeans. Increased nutrient enrichment in the northern Gulf of Mexico has resulted in the degradation of water quality as more phytoplankton grow, which increases turbidity and depletes oxygen in the lower depths creating what is known as the "dead zone." In 2002, the dead zone was 22,000 square kilometers (km2), an area similar to the size of the State of Massachusetts. Changes in the flow regime from engineered structures have had direct and indirect effects on the fish communities. The navigation pools in the upper Mississippi River have aged, and these overwintering habitats, which were created when the pools filled, have declined as sedimentation reduces water depth. Reproduction of paddlefish may have been adversely affected by dams, which impede access to suitable spawning habitats. Fishes that inhabit swift-current habitats in the unimpounded lower Mississippi River have not declined as much as in the upper Mississippi River. The decline of the pallid sturgeon may be attributable to channelization of the Missouri River above St. Louis, Missouri. The Missouri River supports a rich fish community and remains relatively intact. Nevertheless, the widespread and long history of human intervention in river discharge has contributed to the declines of about 25 percent of the species. The Mississippi River Delta Plain is built from six delta complexes composed of a massive area of coastal wetlands that support the largest commercial fishery in the conterminous United States. Since the early 20th century, approximately 4,900 km2 of coastal lands have been lost in Louisiana. One of the primary mechanisms of wetland loss on the Plaquemines-Balize complex is believed to be the disconnection of the river distributary network from the delta plain by the massive system of levees on the delta top, which prevent overbank flooding and replenishment of the delta top by sediment and nutrient deliveries. Efforts by Federal and State agencies to conserve and restore the Mississippi River Delta Plain began over three decades ago and have accelerated over the past decade. Regardless of these efforts, however, land losses are expected to continue because the reduced upstream sediment supplies are not sufficient to keep up with the projected depositional space being created by the combined forces of delta plain subsidence and global sea-level rise.

Alabama;Alberta;Arkansas;Colorado;Georgia;Illinois↗

Coping with mist-net capture-rate bias: Canopy height and several extrinsic factors

Many factors other than a species' actual abundance can affect mist-net capture rates. We used ANCOVA models to quantify some potential biases and control their effects, producing adjusted estimates of capture rates that are more directly comparable among mist-net stations. Data came from 46 two-day mist-net sessions from September 1990 to May 1992 at six subtropical forest stations in the Rio Bravo Conservation and Management Area, northwest Belize. Factors evaluated included canopy height at net sites, long-term net shyness (days elapsed between first and last netting day of the entire study period), season (wet vs. dry), total rainfall during a netting session, and temperature. Number of individuals and species captured/10 net-h declined at each net with increasing canopy height above the net. Capture rates differed significantly among some of the stations. Elapsed days and rainfall caused significant bias in capture rates, which were statistically controlled within the ANCOVA, whereas season and temperature did not. Capture rates varied among sessions, but there was a slight and significant decline over the entire study period for all stations combined. Rainfall significantly depressed capture rates somewhat on a daily basis, but capture rates did not differ between wet and dry seasons. When we replaced the station variable in the ANCOVA with mean canopy height, the model was still highly significant, but did not explain as much of the variation in capture rates. Statistical analysis provides an objective means of interpreting data and estimating reliability, but only if statistical assumptions of the analyses are met. We discuss the need for including randomization in the experimental design, standardizing netting protocol, and quantifying sources of bias in the field, before ANCOVA or other parametric statistical techniques can be used to partition effects of biases.

Studies in Avian Biology↗

Ecoregions and stream morphology in eastern Oklahoma

Broad-scale variables (i.e., geology, topography, climate, land use, vegetation, and soils) influence channel morphology. How and to what extent the longitudinal pattern of channel morphology is influenced by broad-scale variables is important to fluvial geomorphologists and stream ecologists. In the last couple of decades, there has been an increase in the amount of interdisciplinary research between fluvial geomorphologists and stream ecologists. In a historical context, fluvial geomorphologists are more apt to use physiographic regions to distinguish broad-scale variables, while stream ecologists are more apt to use the concept of an ecosystem to address the broad-scale variables that influence stream habitat. For this reason, we designed a study using ecoregions, which uses physical and biological variables to understand how landscapes influence channel processes. Ecoregions are delineated by similarities in geology, climate, soils, land use, and potential natural vegetation. In the fluvial system, stream form and function are dictated by processes observed throughout the fluvial hierarchy. Recognizing that stream form and function should differ by ecoregion, a study was designed to evaluate how the characteristics of stream channels differed longitudinally among three ecoregions in eastern Oklahoma, USA: Boston Mountains, Ozark Highlands, and Ouachita Mountains. Channel morphology of 149 stream reaches was surveyed in 1st- through 4th-order streams, and effects of drainage area and ecoregion on channel morphology was evaluated using multiple regressions. Differences existed (?????0.05) among ecoregions for particle size, bankfull width, and width/depth ratio. No differences existed among ecoregions for gradient or sinuosity. Particle size was smallest in the Ozark Highlands and largest in the Ouachita Mountains. Bankfull width was larger in the Ozark Highlands than in the Boston Mountains and Ouachita Mountains in larger streams. Width/depth ratios of the Boston Mountains and Ozark Highlands were not statistically different. Significant differences existed, however, between the Boston Mountains and Ozark Highlands when compared individually to the Ouachita Mountains. We found that ecoregions afforded a good spatial structure that can help in understanding longitudinal trends in stream reach morphology surveyed at the reach scale. The hierarchy of the fluvial system begins within a broad, relatively homogenous setting that imparts control on processes that affect stream function. Ecoregions provide an adequate regional division to begin a large-scale geomorphic study of processes in stream channels. ?? 2010 Elsevier B.V.

Geomorphology↗

Ecogeomorphic interactions of Russian olives (Elaeagnus angustifolia) and point-bar morphology along Powder River, Montana, USA

Point bars are crucial alluvial features that help sustain meandering river ecosystems. They are influenced by interactions among physical processes and biological components, such as riparian vegetation. Understanding the mechanisms underlying these interactions can inform management decisions. The meandering Powder River in southeastern Montana, USA, provides a valuable study system for fluvial interactions because it has no major human alterations. Riparian stands of non-native Russian olive trees ( Elaeagnus angustifolia ) became noticeable after ~50-year flood in 1978. Fortuitously, 20 channel cross-sections had been established in 1975 and 1977 and have been surveyed periodically ever since. This temporally extensive dataset was coupled with a spatially extensive dataset of 85 point-bar cross-sections derived from high-resolution LiDAR that enabled evaluation of interactions between Russian olives and point-bar morphology through time and space. Based on published literature and field observations, we hypothesised that an increase in the width of Russian olive stands would result in (1) a decrease in the overall point-bar slope, (2) an increase in point-bar heights and (3) in point-bar toe-slopes. The results indicated that point-bar slopes did decrease with an increase in stand width, supporting the first hypothesis ( R 2 = 0.87). However, point-bar heights decreased with an increase in stand width ( R 2 = 0.63), contradicting the second hypothesis and there was no relation between point-bar toe-slopes and stand width ( R 2 < 0.1). The reverse hypothesis that point-bar morphology controls Russian olive stand widths makes more biophysical sense. Thus, Russian olive stand width increases as the point-bar slope and height decrease ( R 2 = 0.79 and 0.50), which provide a greater area of inundation for colonisation. This study demonstrates that geomorphology is controlling non-native vegetation colonisation along Powder River, but that the subsequent stabilisation associated with Russian oliveexpansion may in turn upset the critical geomorphic balance between bank erosion and point-bar aggradation necessary for a stable meandering system.

Montana↗

Adaptive management for improving species conservation across the captive-wild spectrum

Conservation of endangered species increasingly envisages complex strategies that integrate captive and wild management actions. Management decisions in this context must be made in the face of uncertainty, often with limited capacity to collect information. Adaptive management (AM) combines management and monitoring, with the aim of updating knowledge and improving decision-making over time. We provide a guide for managers who may realize the potential of AM, but are unsure where to start. The urgent need for iterative management decisions, the existence of uncertainty, and the opportunity for learning offered by often highly-controlled captive environments create favorable conditions for AM. However, experiments and monitoring may be complicated by small sample sizes, and the ability to control the system, including stochasticity and observability, may be limited toward the wild end of the spectrum. We illustrate the key steps to implementing AM in threatened species management using four case studies, including the management of captive programs for cheetah (Acinonyx jubatus) and whooping cranes (Grus americana), of a translocation protocol for Arizona cliffroses Purshia subintegra and of ongoing supplementary feeding of reintroduced hihi (Notiomystis cincta) populations. For each case study, we explain (1) how to clarify whether the decision can be improved by learning (i.e. it is iterative and complicated by uncertainty) and what the management objectives are; (2) how to articulate uncertainty via alternative, testable hypotheses such as competing models or parameter distributions; (3) how to formally define how additional information can be collected and incorporated in future management decisions.

Biological Conservation↗

Core-scale permeability of an actively venting, felsic-hosted hydrothermal system: The PACMANUS Hydrothermal Field

Permeability of the ocean crust is one of the most crucial parameters for constraining submarine fluid flow systems. Active hydrothermal fields are dynamic areas where fluid flow strongly affects the geochemistry and biology of the surrounding environment. There have been few permeability measurements in these regions, especially in felsic-hosted hydrothermal systems. We present a data set of 38 permeability and porosity measurements from the PACMANUS hydrothermal field, an actively venting, felsic hydrothermal field in the eastern Manus Basin. Permeability was measured using a complex transient method on 2.54-cm minicores. Permeability varies greatly between the samples, spanning over five orders of magnitude. Permeability decreases with both depth and decreasing porosity. When the alteration intensity of individual samples is considered, relationships between depth and porosity and permeability become more clearly defined. For incompletely altered samples (defined as >5% fresh rock), permeability and porosity are constant with depth. For completely altered samples (defined as <5% fresh rock), permeability and porosity decrease with depth. On average, the permeability values from the PACMANUS hydrothermal field are greater than those in other submarine environments using similar core-scale laboratory measurements; the average permeability, 4.5 x 10–16 m2, is two to four orders of magnitude greater than in other areas. Although the core-scale permeability is higher than in other seafloor environments, it is still too low to obtain the fluid velocities observed in the PACMANUS hydrothermal field based on simplified analytical calculations. It is likely that core-scale permeability measurements are not representative of bulk rock permeability of the hydrothermal system overall, and that the latter is predominantly fracture controlled.

Conference Paper↗

Parasite manipulation of brain monoamines in California killifish (Fundulus parvipinnis) by the trematode Euhaplorchis californiensis

California killifish (Fundulus parvipinnis) infected with the brain-encysting trematode Euhaplorchis californiensis display conspicuous swimming behaviours rendering them more susceptible to predation by avian final hosts. Heavily infected killifish grow and reproduce normally, despite having thousands of cysts inside their braincases. This suggests that E. californiensis affects only specific locomotory behaviours. We hypothesised that changes in the serotonin and dopamine metabolism, essential for controlling locomotion and arousal may underlie this behaviour modification. We employed micropunch dissection and HPLC to analyse monoamine and monoamine metabolite concentrations in the brain regions of uninfected and experimentally infected fish. The parasites exerted density-dependent changes in monoaminergic activity distinct from those exhibited by fish subjected to stress. Specifically, E. californiensis inhibited a normally occurring, stress-induced elevation of serotonergic metabolism in the raphae nuclei. This effect was particularly evident in the experimentally infected fish, whose low-density infections were concentrated on the brainstem. Furthermore, high E. californiensis density was associated with increased dopaminergic activity in the hypothalamus and decreased serotonergic activity in the hippocampus. In conclusion, the altered monoaminergic metabolism may explain behavioural differences leading to increased predation of the infected killifish by their final host predators. ?? 2008 The Royal Society.

Proceedings of the Royal Society B: Biological Sci↗

Efficacy of spray –Dried Pseudomonas fluorescens, strain CL145A (Zequanox®), for controlling Zebra Mussels ( Dreissena polymorpha ) within Lake Minnetonka, MN enclosures

The efficacy of whole water column and subsurface applications of the biopesticide Zequanox®, a commercially prepared spray-dried powder formulation of Pseudomonas fluorescens (strain CL145A), were evaluated for controlling zebra mussels (Dreissena polymorpha) within 27-m2 enclosures in Lake Minnetonka (Deephaven, Minnesota). Five treatments consisting of (1) two whole water column Zequanox applications, (2) two subsurface Zequanox applications, and (3) an untreated control were completed on each of three independent treatment days during September 2014. The two types of samplers used in the study were (1) type 1 samplers, which were custom built multi-plate samplers (wood, perforated aluminum, and tile substrates) that were placed into Robinson’s Bay in June of 2013 to allow for natural colonization by zebra mussels, and (2) type 2 samplers, which consisted of zebra mussels adhering to perforated aluminum trays that were placed into mesh containment bags. One day prior to treatment, three individual samplers of each type were distributed to test enclosures and exposed to a randomly assigned treatment. Sampling to determine the zebra mussel biomass adhering to type 1 samplers and the survival assessments for zebra mussels contained in type 2 samplers were completed ~40 days after exposure. The zebra mussel biomass adhering to type 1 samplers and the survival of zebra mussels contained in type 2 samplers were significantly less in groups treated with the highest Zequanox concentrations and in groups that received whole water column applications than comparable groups treated with lower Zequanox concentrations and subsurface applications. However, standardization of biomass and survival results to the amount of Zequanox applied showed that the lower concentrations and subsurface applications were more cost efficient, with respect to product used, at reducing zebra mussel biomass and for inducing zebra mussel mortality. Although the subsurface application methods and lower treatment concentrations were more cost efficient, biological significance and management goals should be evaluated prior to selecting the application method. Development and refinement of additional application techniques may improve the utility of the subsurface Zequanox applications.

Report↗

Development and application of freshwater sediment-toxicity benchmarks for currently used pesticides

Sediment-toxicity benchmarks are needed to interpret the biological significance of currently used pesticides detected in whole sediments. Two types of freshwater sediment benchmarks for pesticides were developed using spiked-sediment bioassay (SSB) data from the literature. These benchmarks can be used to interpret sediment-toxicity data or to assess the potential toxicity of pesticides in whole sediment. The Likely Effect Benchmark (LEB) defines a pesticide concentration in whole sediment above which there is a high probability of adverse effects on benthic invertebrates, and the Threshold Effect Benchmark (TEB) defines a concentration below which adverse effects are unlikely. For compounds without available SSBs, benchmarks were estimated using equilibrium partitioning (EqP). When a sediment sample contains a pesticide mixture, benchmark quotients can be summed for all detected pesticides to produce an indicator of potential toxicity for that mixture. Benchmarks were developed for 48 pesticide compounds using SSB data and 81 compounds using the EqP approach. In an example application, data for pesticides measured in sediment from 197 streams across the United States were evaluated using these benchmarks, and compared to measured toxicity from whole-sediment toxicity tests conducted with the amphipod Hyalella azteca (28-d exposures) and the midge Chironomus dilutus (10-d exposures). Amphipod survival, weight, and biomass were significantly and inversely related to summed benchmark quotients, whereas midge survival, weight, and biomass showed no relationship to benchmarks. Samples with LEB exceedances were rare (n = 3), but all were toxic to amphipods (i.e., significantly different from control). Significant toxicity to amphipods was observed for 72% of samples exceeding one or more TEBs, compared to 18% of samples below all TEBs. Factors affecting toxicity below TEBs may include the presence of contaminants other than pesticides, physical/chemical characteristics of sediment, and uncertainty in TEB values. Additional evaluations of benchmarks in relation to sediment chemistry and toxicity are ongoing.

Science of the Total Environment↗

The evolution of sex-change mechanisms in fishes

Five distinct sex-change mechanisms are identified among sequentially hermaphroditic fishes based on socio-ecological characteristics. The primary determinants of the sex-change mechanisms appear to be social organization and mating system, which in turn depend on resource distribution in space and time. The ability of a single individual to control all mating in the social unit, which is related to the size of the social unit, differentiates three suppression mechanisms from two induction mechanisms. Sex-change suppression, which is characteristic of species with small group size and rigid dominance hierarchies, refers to inevitable sex change in the absence of group dominance. Ability to migrate between resource patches differentiates protogynous suppression (e.g. in Labroides dimidiatus ) from protandrous suppression (e.g. in Amphiprion spp.). Early sex change appears to have evolved from protogynous suppression under special conditions involving the loss of mating control by a single dominant individual in certain species (e.g. Centropyge spp. ). Sex-change induction, which is characteristic of species with large social groups lacking rigid dominance hierarchies, refers to the requirement that sex change must be induced by specific characteristics of (or changes in) the social group, regardless of dominance status. Ability to distinguish sex, or its importance, differentiates sex-ratio induction (e.g. Anthias squamipinnis ) from size-ratio induction (e.g. Thalassoma spp.). Alternative models account for the possibility that all cases of sex change require stimulation from smaller conspecifics (universal induction-inhibition model) or that all fish have the genetic capacity to switch mechanisms, depending on changing ecological conditions and resulting changes in mating system (behavioral-scaling model). Neurophysiological models suggest that induction mechanisms, which require at least two categories of environmental stimuli, may have evolved from the simpler suppression mechanisms, which require only one kind of input from the environment.

Environmental Biology of Fishes↗

The importance of genetic verification for determination of Atlantic salmon in north Pacific waters

Genetic analyses of two unknown but putative Atlantic salmon Salmo salar captured in the Copper River drainage, Alaska, demonstrated the need for validation of morphologically unusual fishes. Mitochondrial DNA sequences (control region and cytochrome b) and data from two nuclear genes [first internal transcribed spacer (ITS-1) sequence and growth hormone (GH1) amplification product] indicated that the fish caught in fresh water on the Martin River was a coho salmon Oncorhynchus kisutch, while the other fish caught in the intertidal zone of the Copper River delta near Grass Island was an Atlantic salmon. Determination of unusual or cryptic fish based on limited physical characteristics and expected seasonal spawning run timing will add to the controversy over farmed Atlantic salmon and their potential effects on native Pacific species. It is clear that determination of all putative collections of Atlantic salmon found in Pacific waters requires validation. Due to uncertainty of fish identification in the field using plastic morphometric characters, it is recommended that genetic analyses be part of the validation process. ?? 2003 The Fisheries Society of the British Isles.

Journal of Fish Biology↗

The smaller, the better? First evaluation of growth and mortality in crayfish internally tagged with p-Chips

Small-bodied aquatic animals present a challenge to researchers seeking to uniquely mark individuals for scientific study. Microtransponder tags, such as p-Chips, represent the smallest electronic animal tags available to meet this need. The use of p-Chips to tag freshwater crayfishes, however, has not been explored. The goal of this study, therefore, was to determine the effects of p-Chip tagging on growth and survival of crayfishes in a controlled laboratory environment. We also investigated potential influences from variables such as sex, reproductive form, number of molt events, and crayfish size on mortality. We internally tagged individuals of the woodland crayfish Faxonius hylas (Faxon, 1890) (12.2–26.6 mm carapace length; CL) with either one p-Chip (single-tag) or one p-Chip and one visual implant elastomer tag (double-tagged) and observed the effects over a period of 90 days. Survival probability over time was not statistically different ( P > 0.05) among tagging groups, sex, and reproductive form. Survival rates were similar across all tagging groups, with 75% in the control group, 77% in the double-tagged group, and 78% in the single-tag group. A strong correlation, however, was observed between survival and the number of molt events. Additionally, there was a negative correlation between survival and crayfish size (CL), indicating a higher risk of mortality for larger individuals. There were no statistically significant differences in growth in CL ( P = 0.30) or mass ( P = 0.19) among the tagging groups. We conclude that p-Chips are a viable tagging option for the study of crayfishes given their size, readability, and retention through molting cycles. We recommend that future studies repeat this experiment using smaller individuals to determine the minimum crayfish size compatible with p-Chip tagging. It is also important to test p-Chips with other crayfish species and compare the growth and mortality of crayfish tagged with p-Chips in natural habitats.

Journal of Crustacean Biology↗

Invasive zebra mussels ( Driessena polymorpha ) and Asian clams ( Corbicula fluminea ) survive gut passage of migratory fish species: implications for dispersal

The introduction and spread of invasive species is of great concern to natural resource managers in the United States. To effectively control the spread of these species, managers must be aware of the multitude of dispersal methods used by the organisms. We investigated the potential for survival through the gut of a migrating fish (blue catfish, Ictalurus furcatus ) as a dispersal mechanism for two invasive bivalves: zebra mussel ( Driessena polymorpha ) and Asian clam ( Corbicula fluminea ). Blue catfish (N = 62) were sampled over several months from Sooner Lake, Oklahoma, transported to a laboratory and held in individual tanks for 48 h. All fecal material was collected and inspected for live mussels. Survival was significantly related to water temperature in the lake at the time of collection, with no mussels surviving above 21.1 C&deg;, whereas 12 % of zebra mussels (N = 939) and 39 % of Asian clams (N = 408) consumed in cooler water survived gut passage. This research demonstrates the potential for blue catfish to serve as a dispersal vector for invasive bivalves at low water temperatures.

Biological Invasions↗

Step-changes in the physical, chemical and biological characteristics of the Gulf of Maine, as documented by the GNATS time series

We identify step-changes in the physical, chemical and biological characteristics of the Gulf of Maine (GoM) using the Gulf of Maine North Atlantic Time Series (GNATS), a series of oceanographic measurements obtained between September 1998 and December 2010 along a transect in the GoM running from Portland, ME, to Yarmouth, NS. GNATS sampled a period of extremes in precipitation and river discharge (4 of the 8 wettest years of the last century occurred between 2005 and 2010). Coincident with increased precipitation, we observed the following shifts: (1) decreased salinity and density within the surface waters of the western GoM; (2) both reduced temperature and vertical temperature gradients in the upper 50 m; (3) increased colored dissolved organic matter (CDOM) concentrations and particle scattering in the western GoM; (4) increased concentrations of nitrate and phosphate across all but the eastern GoM; (5) increased silicate, particularly in the western GoM, with a sharp increase in the ratio of silicate to dissolved inorganic nitrogen; (6) sharply decreased carbon fixation by phytoplankton; (7) moderately decreased chlorophyll, particulate organic carbon (POC) and particulate inorganic carbon (PIC) in the central GoM and (8) decreased POC- and PIC-specific growth rates. Gulf-wide anomaly analyses suggest that (1) the surface density changes were predominantly driven by temperature, (2) dissolved nutrients, as well as POC/PON, varied in Redfield ratios and (3) anomalies for salinity, density, CDOM, particle backscattering and silicate were significantly correlated with river discharge. Precipitation and river discharge appear to be playing a critical role in controlling the long-term productivity of the Gulf of Maine by supplying CDOM and detrital material, which ultimately competes with phytoplankton for light absorption.

Maine↗

Lipidomics reveals specific lipid molecules associated with cold stress syndrome in the Florida manatee (Trichechus manatus latirostris)

Cold stress syndrome (CSS) in the Florida manatee ( Trichechus manatus latirostris) results in perturbations to many physiological pathways, often leading to further illness or death. In this study, we applied a non-targeted lipidomics approach with ultra-high performance liquid chromatography and high-resolution tandem mass spectrometry to characterize changes related to CSS in the lipidomic profiles of manatee plasma. Lipidomic analyses were conducted on healthy manatee (control) and cold-exposed manatee plasma samples with varying concentrations of Serum Amyloid A (SAA), an acute-phase protein that is associated with inflammatory disease. Control manatees ( n = 10) were compared to all manatees exposed to cold temperatures ( n = 17), and a subset of those manatees with SAA values > 120 μg/mL ( n = 9). Increased SAA values were associated with higher levels of various acylcarnitine lipids, while several triacylglycerols and oxidized triacylglycerols were significantly lower in manatees with cold exposure. These identified lipids are critical molecules involved in the maintenance of energy homeostasis and could potentially be examined in conjunction with current physical parameters to characterize cold stress. The ability to detect such differences highlights the addition of lipidomics as a valuable tool in understanding cold stress and potentially other illnesses in manatees. Further investigation into the function of the altered lipids could greatly increase our understanding of lipid metabolism in physiologically stressed manatees as well as other marine mammals and inform future management recovery strategies.

Marine Biology↗

Survival and behavior of Chinese mystery snails (Bellamya chinensis) in response to simulated water body drawdowns and extended air exposure

Nonnative invasive mollusks degrade aquatic ecosystems and induce economic losses worldwide. Extended air exposure through water body drawdown is one management action used for control. In North America, the Chinese mystery snail (Bellamya chinensis) is an invasive aquatic snail with an expanding range, but eradication methods for this species are not well documented. We assessed the ability of B. chinensis to survive different durations of air exposure, and observed behavioral responses prior to, during, and following desiccation events. Individual B. chinensis specimens survived air exposure in a laboratory setting for > 9 weeks, and survivorship was greater among adults than juveniles. Several B. chinensis specimens responded to desiccation by sealing their opercula and/or burrowing in mud substrate. Our results indicate that drawdowns alone may not be an effective means of eliminating B. chinensis. This study lays the groundwork for future management research that may determine the effectiveness of drawdowns when combined with factors such as extreme temperatures, predation, or molluscicides.

Management of Biological Invasions↗

Trophic plasticity and the invasion of a renowned piscivore: A diet synthesis of northern pike (Esox lucius) from the native and introduced ranges in Alaska, U.S.A.

The invasion of non-native fishes is a leading cause of extinction and imperilment of native freshwater fishes. Evidence suggests that introduced species with generalist diets have the potential for greatest impacts through competition and predation even though populations are often comprised of specialist individuals. The northern pike (Esox lucius), a predatory fish, has been widely introduced outside its native range for recreational fishing purposes, especially in western North America, and it has been implicated in declines and extirpations of native fishes. We synthesized over 2,900 individual northern pike diet records across 31 waterbodies from the native and introduced ranges in Alaska to quantify the extent of diet specialization and generalization relative to freshwater prey communities. To control for effects of ontogenetic diet shifts, we separately analyzed major size classes of northern pike and inferred and visualized trophic plasticity from Prey-Specific Abundance indices and ordination. Diet generalization was common in northern pike among waterbodies and usually consisted of individuals consuming macroinvertebrates. However, when available, individual northern pike diets showed specialization on fishes, amphibians, small mammals, and dragonflies. The reliance on macroinvertebrate prey by northern pike from small, isolated lakes in the native and invasive ranges suggests that dietary plasticity facilitates persistence of these predators in the absence of preferred fish prey. Broadly, this synthesis supports the hypothesis that trophic plasticity and diet generalization widely occur among invasive and native populations of northern pike which is likely to enhance the probability of introduction success, exacerbate their environmental impacts, and complicate management of this potentially invasive freshwater predator.

Alaska↗

Environmental contamination and unusual snake mortality in an urban national wildlife refuge

The National Wildlife Refuge (NWR) System protects ~150 million acres of land and water in the United States and provides habitat for >2,000 native vertebrates species. Although legally protected, wildlife populations within these refuges can be threatened by anthropogenic activities. The lack of knowledge about such threats has the potential to undermine biodiversity conservation. We investigated patterns of wildlife mortality among three NWRs in the northern U.S. Gulf Coast. Visual surveys (958 total search-hours) were conducted for live or dead amphibians and reptiles at Big Branch, Bogue Chitto, and Bayou Sauvage NWRs. An exceptionally high incidence of snake mortality (>800% above background, P < 0.001) was observed at one site (Haul Road, Bayou Sauvage NWR). Mortality affected seven species and recurred for 29 months. Intact carcasses were subject to histopathological examination and diagnostic testing. Cause of death was undetermined (n = 9) or attributed to various pathogens (n = 5). To investigate possible underlying causes of this unusual mortality, water exposure challenges and soil toxicological analyses (n = 6 and 11 sites, respectively) were conducted on samples from Bayou Sauvage NWR, given the known potential for anthropogenic contamination in the refuge. In a controlled experiment, survival of Anaxyrus fowlerii embryos exposed to water from Recovery Road (i.e., 250m from a landfill) and Haul Road was reduced 92% and 48%, respectively, compared to four reference sites in the refuge. Sediment analyses suggested at least seven distinct sources of contaminants in Bayou Sauvage NWR. Potential sources included a landfill, illegal dumping, vehicle emissions, pesticide migration, and an active hydrocarbon pipeline leak discovered 600 m from Haul Road. Synthesis and applications: Although further research is needed to determine whether the observed mortality and contamination are related, these collective findings suggest that anthropogenic factors may threaten the ecological integrity of one of the United States largest urban wildlife refuges. More broadly, our study highlights the critical need for species inventories, baseline data, and systematic monitoring in NWRs. Such information is essential to detecting and mitigating anthropogenic threats to biodiversity conservation in protected areas.

Louisiana↗