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At least 1,009 records · Page 56Linked to original sources
USGS2010

Numerical simulations examining the possible role of anthropogenic and volcanic emissions during the 1997 Indonesian fires

The regional atmospheric chemistry and climate model REMOTE has been used to conduct numerical simulations of the atmosphere during the catastrophic Indonesian fires of 1997. These simulations represent one possible scenario of the event, utilizing the RETRO wildland fire emission database. Emissions from the fires dominate the atmospheric concentrations of O 3 , CO, NO 2 , and SO 2 creating many possible exceedances of the Indonesian air quality standards. The scenario described here suggests that urban anthropogenic emissions contributed to the poor air quality due primarily to the fires. The urban air pollution may have increased the total number of people exposed to exceedances of the O 3 1-h standard by 17%. Secondary O 3 from anthropogenic emissions enhanced the conversion of SO 2 released by the fires to S O 4 2 − "> S O 2 − 4 , demonstrating that the urban pollution actively altered the atmospheric behavior and lifetime of the fire emissions. Under the conditions present during the fires, volcanic SO 2 emissions had a negligible influence on surface pollution.

Air Quality, Atmosphere & Health↗
USGS2013

Hydrogeology and water quality in the Snake River alluvial aquifer at Jackson Hole Airport, Jackson, Wyoming, water years 2011 and 2012

The hydrogeology and water quality of the Snake River alluvial aquifer at the Jackson Hole Airport in northwest Wyoming was studied by the U.S. Geological Survey, in cooperation with the Jackson Hole Airport Board, during water years 2011 and 2012 as part of a followup to a previous baseline study during September 2008 through June 2009. Hydrogeologic conditions were characterized using data collected from 19 Jackson Hole Airport wells. Groundwater levels are summarized in this report and the direction of groundwater flow, hydraulic gradients, and estimated groundwater velocity rates in the Snake River alluvial aquifer underlying the study area are presented. Analytical results of groundwater samples collected from 10 wells during water years 2011 and 2012 are presented and summarized. The water table at Jackson Hole Airport was lowest in early spring and reached its peak in July or August, with an increase of 12.5 to 15.5 feet between April and July 2011. Groundwater flow was predominantly horizontal but generally had the hydraulic potential for downward flow. Groundwater flow within the Snake River alluvial aquifer at the airport was from the northeast to the west-southwest, with horizontal velocities estimated to be about 25 to 68 feet per day. This range of velocities slightly is broader than the range determined in the previous study and likely is due to variability in the local climate. The travel time from the farthest upgradient well to the farthest downgradient well was approximately 52 to 142 days. This estimate only describes the average movement of groundwater, and some solutes may move at a different rate than groundwater through the aquifer. The quality of the water in the alluvial aquifer generally was considered good. Water from the alluvial aquifer was fresh, hard to very hard, and dominated by calcium carbonate. No constituents were detected at concentrations exceeding U.S. Environmental Protection Agency maximum contaminant levels or health advisories; however, reduction and oxidation (redox) measurements indicate oxygen-poor water in many of the wells. Gasoline-range organics, three volatile organic compounds, and triazoles were detected in some groundwater samples. The quality of groundwater in the alluvial aquifer generally was suitable for domestic and other uses; however, dissolved iron and manganese were detected in samples from many of the monitor wells at concentrations exceeding U.S. Environmental Protection Agency secondary maximum contaminant levels. Iron and manganese likely are both natural components of the geologic materials in the area and may have become mobilized in the aquifer because of redox processes. Additionally, measurements of dissolved-oxygen concentrations and analyses of major ions and nutrients indicate reducing conditions exist at 7 of the 10 wells sampled. Measurements of dissolved-oxygen concentrations (less than 0.1 to 9 milligrams per liter) indicated some variability in the oxygen content of the aquifer. Dissolved-oxygen concentrations in samples from 3 of the 10 wells indicated oxic conditions in the aquifer, whereas low dissolved-oxygen concentrations (less than 1 milligram per liter) in samples from 7 wells indicated anoxic conditions. Nutrients were present in low concentrations in all samples collected. Nitrate plus nitrite was detected in samples from 6 of the 10 monitored wells, whereas dissolved ammonia was detected in small concentrations in 8 of the 10 monitored wells. Dissolved organic carbon concentrations generally were low. At least one dissolved organic carbon concentration was quantified by the laboratory in samples from all 10 wells; one of the concentrations was an order of magnitude higher than other detected dissolved organic carbon concentrations, and slightly exceeded the estimated range for natural groundwater. Samples were collected for analyses of dissolved gases, and field analyses of ferrous iron, hydrogen sulfide, and low-level dissolved oxygen were completed to better understand the redox conditions of the alluvial aquifer. Dissolved gas analyses confirmed low concentrations of dissolved oxygen in samples from wells where reducing conditions exist and indicated the presence of methane gas in samples from several wells. Redox processes in the alluvial aquifer were identified using a model designed to use a multiple-lines-of-evidence approach to distinguish reduction processes. Results of redox analyses indicate iron reduction was the dominant redox process; however, the model indicated manganese reduction and methanogenesis also were taking place in the aquifer. Each set of samples collected during this study included analysis of at least two, but often many anthropogenic compounds. During the previous 2008–09 study at Jackson Hole Airport, diesel-range organics were measured in small (estimated) concentrations in several samples. Samples collected from all 10 wells sampled during the 2011–12 study were analyzed for diesel-range organics, and there were no detections; however, several other anthropogenic compounds were detected in groundwater samples during water years 2011—12 that were not detected during the previous 2008–09 study. Gasoline-range organics, benzene, ethylbenzene, and total xylene were each detected (but reported as estimated concentrations) in at least one groundwater sample. These compounds were not detected during the previous study or consistently during this study. Several possible reasons these compounds were not detected consistently include (1) these compounds are present in the aquifer at concentrations near the analytical method detection limit and are difficult to detect, (2) these compounds were not from a persistent source during this study, and (3) these compounds were detected because of contamination introduced during sampling or analysis. During water years 2011–2012, groundwater samples were analyzed for triazoles, specifically benzotriazole, 4-methyl-1H-benzotriazole, and 5-methyl-1H-benzotriazole. Triazoles are anthropogenic compounds often used as an additive in deicing and anti-icing fluids as a corrosion inhibitor, and can be detected at lower laboratory reporting levels than glycols, which previously had not been detected. Two of the three triazoles measured, 4-methyl-1H-benzotriazole and 5-methyl-1H-benzotriazole, were detected at low concentrations in groundwater at 7 of the 10 wells sampled. The detection of triazole compounds in groundwater downgradient from airport operations makes it unlikely there is a natural cause for the high rates of reduction present in many airport monitor wells. It is more likely that aircraft deicers, anti-icers, or pavement deicers have seeped into the groundwater system and caused the reducing conditions.

Wyoming↗
USGS2007

Immunotoxicity of trenbolone acetate in Japanese quail

Trenbolone acetate is a synthetic androgen that is currently used as a growth promoter in many meat-exporting countries. Despite industry laboratories classifying trenbolone as nonteratogenic, data showed that embryonic exposure to this androgenic chemical altered development of the immune system in Japanese quail. Trenbolone is lipophilic, persistent, and released into the environment in manure used as soil fertilizer. This is the first study to date to assess this chemical's immunotoxic effects in an avian species. A one-time injection of trenbolone into yolks was administered to mimic maternal deposition, and subsequent effects on the development and function of the immune system were determined in chicks and adults. Development of the bursa of Fabricius, an organ responsible for development of the humoral arm of the immune system, was disrupted, as indicated by lower masse, and smaller and fewer follicles at day 1 of hatch. Morphological differences in the bursas persisted in adults, although no differences in either two measures of immune function were observed. Total numbers of circulating leukocytes were reduced and heterophil-lymphocyte ratios were elevated in chicks but not adults. This study shows that trenbolone acetate is teratogenic and immunotoxic in Japanese quail, and provides evidence that the quail immune system may be fairly resilient to embryonic endocrine-disrupting chemical-induced alterations following no further exposure posthatch.

Journal of Toxicology and Environmental Health, Pa↗
USGS1977

Effects of DDE on experimentally poisoned free-tailed bats (Tadarida brasiliensis): Lethal brain concentrations

Adult female free-tailed bats (Tadarida brasiliensis) were collected at Bracken Cave, Texas, and shipped to the Patuxent Wildlife Research Center. Treated mealworms (Tenebrio molitor) containing 107 ppm DDE were fed to 17 bats; five other bats were fed untreated mealworms. After 40 days on dosage, during which one dosed bat was killed accidentally, four dosed bats were frozen and the remaining 17 were starved to death. The objective was to elevate brain levels of DDE to lethality and measure these concentrations. After the feeding period, dosed bats weighed less than controls. After starvation, the body condition of dosed bats was poorer than that of controls even though there was no difference in the amounts of carcass fat. During starvation, dosed bats lost weight faster than controls. Also, four dosed bats exhibited the prolonged tremoring that characterizes DDE poisoning. DDE increased in brains of starving bats as fat was metabolized. The estimated mean brain concentration of DDE diagnostic of death was 519 ppm with a range of 458-564 ppm. These values resemble diagnostic levels known for two species of passerine birds, but they exceed published levels for two free-tailed bats from Carlsbad Caverns, New Mexico.

Journal of Toxicology and Environmental Health↗
USGS2020

Parsing the effects of demography, climate, and management on recurrent brucellosis outbreaks in elk

1. Zoonotic pathogens can harm human health and well-being directly or by impacting livestock. Pathogens that spillover from wildlife can also impair conservation efforts if humans perceive wildlife as pests. Brucellosis, caused by the bacterium Brucella abortus, circulates in elk and bison herds of the Greater Yellowstone Ecosystem and poses a risk to cattle and humans. Our goal was to understand the relative effects of climatic drivers, host demography, and management control programs on disease dynamics. 2. Using >20 years of serologic, demographic, and environmental data on brucellosis in elk, we built stochastic compartmental models to assess the influences of climate forcing, herd immunity, population turnover, and management interventions on pathogen transmission. Data were collected at feedgrounds visited in winter by free-ranging elk in Wyoming, USA. 3. Snowpack, hypothesized as a driver of elk aggregation and thus brucellosis transmission, was strongly correlated across feedgrounds. We expected this variable to drive synchronized disease dynamics across herds. Instead, we demonstrate asynchronous epizootics driven by variation in demographic rates. 4. We evaluated the effectiveness of test-and-slaughter of seropositive female elk at two feedgrounds. Test-and-slaughter temporarily reduced herd-level seroprevalence but likely reduced herd immunity while removing few infectious individuals, resulting in subsequent outbreaks once the intervention ceased. We simulated an alternative strategy of removing seronegative female elk and found it would increase herd immunity, yielding fewer infections. We evaluated a second experimental treatment wherein feeding density was reduced at one feedground, but we found no evidence for an effect despite a decade of implementation. 5. Synthesis and applications: Positive serostatus is often weakly correlated with infectiousness but is nevertheless used to make management decisions including lethal removal in wildlife disease systems. We show how this can have adverse consequences whereas efforts that maintain herd immunity can have longer-term protective effects. Climatic drivers may not result in synchronous disease dynamics across populations unless vital rates are also similar because demographic factors have a large influence on disease patterns.

Idaho, Montana, Wyoming↗
USGS2002

Water Quality in the Mahoning River and Selected Tributaries in Youngstown, Ohio

The lower reaches of the Mahoning River in Youngstown, Ohio, have been characterized by the Ohio Environmental Protection Agency (OEPA) as historically having poor water quality. Most wastewater-treatment plants (WWTPs) in the watershed did not provide secondary sewage treatment until the late 1980s. By the late 1990s, the Mahoning River still received sewer-overflow discharges from 101 locations within the city of Youngstown, Ohio. The Mahoning River in Youngstown and Mill Creek, a principal tributary to the Mahoning River in Youngstown, have not met biotic index criteria since the earliest published assessment by OEPA in 1980. Youngstown and the OEPA are working together toward the goal of meeting water-quality standards in the Mahoning River. The U.S. Geological Survey collected information to help both parties assess water quality in the area of Youngstown and to estimate bacteria and inorganic nitrogen contributions from sewer-overflow discharges to the Mahoning River. Two monitoring networks were established in the lower Mahoning River: the first to evaluate hydrology and microbiological and chemical water quality and the second to assess indices of fish and aquatic-macroinvertebrate-community health. Water samples and water-quality data were collected from May through October 1999 and 2000 to evaluate where, when, and for how long water quality was affected by sewer-overflow discharges. Water samples were collected during dry- and wet-weather flow, and biotic indices were assessed during the first year (1999). The second year of sample collection (2000) was directed toward evaluating changes in water quality during wet-weather flow, and specifically toward assessing the effect of sewer-overflow discharges on water quality in the monitoring network. Water-quality standards for Escherichia coli ( E. coli ) concentration and draft criteria for nitrate plus nitrite and total phosphorus were the regulations most commonly exceeded in the Mahoning River and Mill Creek sampling networks. E. coli concentrations increased during wet-weather flow and remained higher than dry-weather concentrations for 48 hours after peak flow. E. coli concentration criteria were more commonly exceeded during wet-weather flow than during dry-weather flow. Exceedances of nutrient-concentration criteria were not substantially more common during wet-weather flow. The fish and aquatic macroinvertebrate network included Mill Creek and its tributaries but did not include the main stem of the Mahoning River. Persistent exceedances of chemical water-quality standards in Mill Creek and the presence of nutrient concentrations in excess of draft criteria may have contributed to biotic index scores that on only one occasion met State criteria throughout the fish and aquatic macroinvertebrate sampling network. Monitored tributary streams did not contribute concentrations of E. coli , nitrate plus nitrite, or total phosphorus to the Mahoning River and Mill Creek that were higher than main-stem concentrations, but monitored WWTP and sewer-overflow discharges did contribute. Twenty-four hour load estimates of sewer-overflow discharge contributions during wet-weather flow indicated that sewer-overflow discharges contributed large loads of bacteria and inorganic nitrogen to the Mahoning River relative to the instream load. The sewer-overflow loads appeared to move as a slug of highly enriched water that passed through Youngstown on the rising limb of the storm hydrograph. The median estimated sewer-overflow load contribution of bacteria was greater than the estimated instream load by a factor of five or more; however, the median estimated sewer-overflow load of inorganic nitrogen was less than half of the estimated instream load. Sewer-overflow discharges contributed loads of E. coli and nutrients to the Mahoning River and Mill Creek at a point where the streams already did not meet State water-quality regulations. Improvement of water quality of the Mahoning River, Mill Creek, and tributaries at Youngstown would be facilitated by reducing loads from sewer-overflow discharges within Youngstown, by identifying and reducing other sources of E. coli and nutrients within Young-stown, and by reducing discharges of E. coli , nitrate plus nitrite, and total phosphorus to the Mahoning River and Mill Creek upstream from Youngstown.

Water-Resources Investigations Report↗
USGS1990

National water summary 1987: Hydrologic events and water supply and use

Water use in the United States, as measured by freshwater withdrawals in 1985, averaged 338,000 Mgal/d (million gallons per day), which is enough water to cover the 48 conterminous States to a depth of about 2.4 inches. Only 92,300 Mgal/d, or 27.3 percent of the water withdrawn, was consumptive use and thus lost to immediate further use; the remainder of the withdrawals (72.7 percent) was return flow available for reuse a number of times as the water flowed to the sea. The 1985 freshwater withdrawals were much less than the average 30 inches of precipitation that falls on the conterminous States each year; consumptive use accounted for only 7 percent of the estimated annual runoff of 1,230,000 Mgal/d. Nonetheless, as the State summaries on water supply and use clearly show, water is not always available when and where it is needed. Balancing water demands with available water supplies constitutes one of the major resource allocation issues that will face the United States in the coming decade. Of the 1985 freshwater withdrawals, 78.3 percent (265,000 Mgal/d) came from surface-water sources (streams and lakes), and 21.7 percent (73,300 Mgal/d) came from ground water. Surface water provided drinking water for about 47 percent of the Nation's total population. It was the source of 59.9 percent of the Nation's public-supply systems. For self-supplied withdrawals, surface water accounted for 1.6 percent of the domestic and commercial uses; 64.0 percent of the industrial and mining use; 99.4 percent of the thermoelectric generation withdrawals, mainly for cooling water; and 65.6 percent of the agricultural withdrawals. Eight States accounted for 43 percent of the surface-water use; California, Colorado, and Idaho used surface water primarily for irrigation, and Dlinois, Michigan, Ohio, Pennsylvania, and Texas used surface-water primarily for cooling condensers or reactors in thermoelectric plants. Ground water provided drinking water for 53 percent of the Nation's total population and nearly all the rural population. It was the source of 40.1 percent of the public-supply systems withdrawals. For self-supplied withdrawals, ground water accounted for 11.3 percent of the domestic and commercial use, 17.3 percent of the industrial and mining withdrawals, less than 1 percent of the thermoelectric generation withdrawals, and 34.4 percent of the agricultural withdrawals (irrigation and livestock). Eight States Arizona, Arkansas, California, Florida, Idaho, Kansas, Nebraska, and Texas accounted for 66 percent of the ground water used. In each of those States, as in many other States, irrigation was the major use of ground water. Each offstream-use category described in the State summaries public supply, domestic and commercial, industrial and mining, thermoelectric power, and agriculture (irrigation and livestock) followed its own geographic pattern as described below. Consumptive use of water effectively removes the water from immediate further use downstream of the withdrawal point. Of the total amount of consumptive water use in 1985, agricultural use accounted for about 82.5 percent. More than one-half (53 percent) of irrigation water is consumptively used by evapotranspiration or is incorporated into the crop. This is a good indication of the effect that irrigated agriculture can have in a river basin where irrigation is a major activity. The availability of return flows for reuse depends largely on where the water reenters the system. If the return flows are discharged to a stream, they usually can be reused; if they are discharged to a saltwater estuary, they are effectively lost to further use because of water-quality degradation just as if the water had been consumptively used. Similarly, water that recharges a highly transmissive aquifer can be available for reuse either through pumpage from a well or as discharge to a local stream. Thus, much of the water withdrawn for different uses can and does become available for further use although the quality might degrade with each additional use. The allocation and the management of water resources are the responsibilities of the individual States and water institutions within the States. These institutions are evolving in response to the challenges of water management problems. As the individual State summaries indicate, recent State legislation deals with facilitating water transfers within the States as a means of reducing imbalances between water supplies and use, with emphasizing water conservation in times of drought and at places where groundwater depletion is a problem of long standing, and with reducing threats to public health and the environment from water pollution. Most of the State summaries indicate the expectation that water use will continue to increase in the future and that water contamination will continue to be a major water concern. Both issues will require increasingly intensive water management in the future. Whether the water resources under management are considered to be fully appropriated or over appropriated, as in some Western States, or whether the resource could support additional development, as is the situation in most States, improved water-use information will play a key role in future water management efforts.

Water Supply Paper↗
USGS2012

Zoonotic viruses associated with illegally imported wildlife products

The global trade in wildlife has historically contributed to the emergence and spread of infectious diseases. The United States is the world's largest importer of wildlife and wildlife products, yet minimal pathogen surveillance has precluded assessment of the health risks posed by this practice. This report details the findings of a pilot project to establish surveillance methodology for zoonotic agents in confiscated wildlife products. Initial findings from samples collected at several international airports identified parts originating from nonhuman primate (NHP) and rodent species, including baboon, chimpanzee, mangabey, guenon, green monkey, cane rat and rat. Pathogen screening identified retroviruses (simian foamy virus) and/or herpesviruses (cytomegalovirus and lymphocryptovirus) in the NHP samples. These results are the first demonstration that illegal bushmeat importation into the United States could act as a conduit for pathogen spread, and suggest that implementation of disease surveillance of the wildlife trade will help facilitate prevention of disease emergence.

PLoS ONE↗
USGS2008

Summary of annual mean and annual harmonic mean statistics of daily mean streamflow for 620 U.S. Geological Survey streamflow-gaging stations in Texas through water year 2007

Analysts and managers of surface-water resources have interest in annual mean and annual harmonic mean statistics of daily mean streamflow for U.S. Geological Survey (USGS) streamflow-gaging stations in Texas. The mean streamflow represents streamflow volume, whereas the harmonic mean streamflow represents an appropriate statistic for assessing constituent concentrations that might adversely affect human health. In 2008, the USGS, in cooperation with the Texas Commission on Environmental Quality, conducted a large-scale documentation of mean and harmonic mean streamflow for 620 active and inactive, continuous-record, streamflow-gaging stations using period of record data through water year 2007. About 99 stations within the Texas USGS streamflow-gaging network are part of the larger national Hydroclimatic Data Network and are identified. The graphical depictions of annual mean and annual harmonic mean statistics in this report provide a historical perspective of streamflow at each station. Each figure consists of three time-series plots, two flow-duration curves, and a statistical summary of the mean annual and annual harmonic mean streamflow statistics for available data for each station.The first time-series plot depicts daily mean streamflow for the period 1900-2007. Flow-duration curves follow and are a graphical depiction of streamflow variability. Next, the remaining two time-series plots depict annual mean and annual harmonic mean streamflow and are augmented with horizontal lines that depict mean and harmonic mean for the period of record. Monotonic trends for the annual mean streamflow and annual harmonic mean streamflow also are identified using Kendall's tau, and the slope of the trend is depicted using the nonparametric (linear) Theil-Sen line, which is only drawn for p-values less than .10 of tau. The history of annual mean and annual harmonic mean streamflow of one or more streamflow-gaging stations could be used in a watershed, river basin, or other regional context by analysts and managers of surface-water resources to guide scientific, regulatory, or other inquiries of streamflow conditions in Texas.

Data Series↗
USGS2004

Environmental factors and chemical and microbiological water-quality constituents related to the presence of enteric viruses in ground water from small public water supplies in southeastern Michigan

A study of small public ground-water-supply wells that produce water from discontinuous sand and gravel aquifers was done from July 1999 through July 2001 in southeastern Michigan. Samples were collected to determine the occurrence of viral pathogens and microbiological indicators of fecal contamination (“indicators”), determine whether indicators are adequate predictors of the presence of enteric viruses, and determine the factors that affect the presence of enteric viruses. Small systems are those that serve less than 3,300 people. Samples were analyzed for specific enteric viruses by reverse transcriptase-polymerase chain reaction (RT-PCR), for culturable viruses by cell culture, and for the indicators total coliforms, Escherichia coli (E. coli) , enterococci, and F-specific and somatic coliphage. Ancillary environmental and water-quality data were collected or compiled. A total of 169 regular samples and 32 replicate pairs were collected from 38 wells. Replicate pairs were samples collected at the same well on the same date. One well was sampled 6 times, 30 wells were sampled five times, 6 wells were sampled twice, and 1 well was sampled once. By use of RT-PCR, enterovirus was found in four wells (10.5 percent) and hepatitis A virus (HAV) in five wells (13.2 percent). In two of these wells, investigators found both enterovirus and HAV, but on different sampling dates. Culturable viruses were found one time in two wells (5.9 percent), and neither of these wells was positive for viruses by use of RT-PCR on any sampling date. If results for all viruses are combined, 9 of the 38 small public-supply wells were positive for enteric viruses (23.7 percent) by either cell culture or RT-PCR. One or more indicators were found in 18 of 38 wells. Total coliforms, E. coli , enterococci, and F-specific and somatic coliphage were found in 34.2, 10.5, 15.8, 5.9, and 5.9 percent, respectively, of the wells tested. In only 3 out of 18 wells were samples positive for an indicator on more than one date at the same well. The co-occurrence of enteric viruses and any indicator was 55.6 percent; five out of the nine virus-positive wells were also found to be positive for an indicator. Two wells with detections of viruses had a detection of total coliforms, one well had a detection of E. coli , one of enterococci, and one of F-specific coliphage. On a per sample basis, of 11 samples that were positive for enteric viruses, indicator bacteria co-occurred in only 2 samples, and coliphage were not present in any. More virus-positive samples were found at sites served by septic systems than those served by sewerlines. Sampling condition (ground water or a mixture of tank and ground water), distance to septic system, type of and distance to nearest surface-water body, well characteristics, or land use were not related to the presence of viruses or indicators. Among continuous water-quality variables, statistically significant relations were found between total coliforms and dissolved organic carbon and between total coliforms and iron. There was a statistically significant relation between chloride concentrations >20 mg/L and detections of total coliforms. Presence of nitrate and nitrite was related to the presence of other indicators ( E. coli , enterococci, and F-specific and somatic coliphage) or enteric viruses, but not to total coliforms. The data indicated that chloride-to-bromide (C1:Br) ratios may be useful as a screening tool for total coliforms and enteric viruses but not for E. coli , enterococci, and F-specific and somatic coliphage. This study provides evidence for fecal contamination of ground water from small public-supply wells, at least on an intermittent basis. Collecting data on multiple lines of evidence would be needed to reliably predict the presence of enteric viruses and protect public health. Future data collection toward this end could include repeat sampling several times a year for different indicators, measuring dissolved-organic carbon, nitrate plus nitrite, and (or) chloride concentrations, or determining C1:Br ratios. The presence of a site served by a septic system is an indication that the well may be more vulnerable to contamination than a site served by a sewerline.

Michigan↗
USGS2012

Groundwater quality in the Indian Wells Valley, California

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Indian Wells Valley is one of the study areas being evaluated. The Indian Wells study area is approximately 600 square miles (1,554 square kilometers) and includes the Indian Wells Valley groundwater basin (California Department of Water Resources, 2003). Indian Wells Valley has an arid climate and is part of the Mojave Desert. Average annual rainfall is about 6 inches (15 centimeters). The study area has internal drainage, with runoff from the surrounding mountains draining towards dry lake beds in the lower parts of the valley. Land use in the study area is approximately 97.0 percent (%) natural, 0.4% agricultural, and 2.6% urban. The primary natural land cover is shrubland. The largest urban area is the city of Ridgecrest (2010 population of 28,000). Groundwater in this basin is used for public and domestic water supply and for irrigation. The main water-bearing units are gravel, sand, silt, and clay derived from the Sierra Nevada to the west and from the other surrounding mountains. Recharge to the groundwater system is primarily runoff from the Sierra Nevada and to the west and from the other surrounding mountains. Recharge to the groundwater system is primarily runoff from the Sierra Nevada and direct infiltration from irrigation and septic systems. The primary sources of discharge are pumping wells and evapotranspiration near the dry lakebeds. The primary aquifers in the Indian Wells study area are defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health database. Public-supply wells in Indian Wells Valley are completed to depths between 240 and 800 feet (73 to 244 meters), consist of solid casing from the land surface to a depth of 180 to 260 feet (55 to 79 meters), and are screened or perforated below the solid casing.

California↗
USGS2004

Shifting shoals and shattered rocks: How man has transformed the floor of west-central San Francisco Bay

San Francisco Bay, one of the world's finest natural harbors and a major center for maritime trade, is referred to as the 'Gateway to the Pacific Rim.' The bay is an urbanized estuary that is considered by many to be the major estuary in the United States most modified by man's activities. The population around the estuary has grown rapidly since the 1850's and now exceeds 7 million people. The San Francisco Bay area's economy ranks as one of the largest in the world, larger even than that of many countries. More than 10 million tourists are estimated to visit the bay region each year. The bay area's population and associated development have increasingly changed the estuary and its environment. San Francisco Bay and the contiguous Sacramento-San Joaquin Delta encompass roughly 1,600 square miles (4,100 km2) and are the outlet of a major watershed that drains more than 40 percent of the land area of the State of California. This watershed provides drinking water for 20 million people (two thirds of the State's population) and irrigates 4.5 million acres of farmland and ranchland. During the past several decades, much has been done to clean up the environment and waters of San Francisco Bay. Conservationist groups have even bought many areas on the margins of the bay with the intention of restoring them to a condition more like the natural marshes they once were. However, many of the major manmade changes to the bay's environment occurred so long ago that the nature of them has been forgotten. In addition, many changes continue to occur today, such as the introduction of exotic species and the loss of commercial and sport fisheries because of declining fish populations. The economy and population of the nine counties that surround the bay continue to grow and put increasing pressure on the bay, both direct and indirect. Therefore, there are mixed signals for the future health and welfare of San Francisco Bay. The San Francisco Bay estuary consists of three subembayments--north bay (San Pablo and Suisun Bays), central bay, and south bay--each characterized by a central area of open water surrounded by intertidal mudflats and marshes. Central bay includes Alcatraz and Angel Islands and also a number of submerged bedrock knobs that protrude through the sediment of the bay floor and rise to within about 40 feet (12 m) of the water surface. The most prominent of these are Harding, Shag, Arch, and Blossom Rocks. These rocks have been lowered by blasting several times in the past, but they remain a potential hazard to shipping because newer cargo vessels are designed with increasingly deeper drafts. Central bay's location adjacent to two major population and commerce centers, San Francisco and Oakland, subjects it to greater human influences than less developed parts of the estuary. The western part of central San Francisco Bay is adjacent to the Golden Gate, the estuary's outlet to the Pacific Ocean. The changing submarine topography of the west-central bay, as well as its geology, form the main focus of this book.

California↗
USGS2011

Use of diverse geochemical data sets to determine sources and sinks of nitrate and methane in groundwater, Garfield County, Colorado, 2009

Previous water-quality assessments reported elevated concentrations of nitrate and methane in water from domestic wells screened in shallow zones of the Wasatch Formation, Garfield County, Colorado. In 2009, the U.S. Geological Survey, in cooperation with the Colorado Department of Public Health and Environment, analyzed samples collected from 26 domestic wells for a diverse set of geochemical tracers for the purpose of determining sources and sinks of nitrate and methane in groundwater from the Wasatch Formation. Nitrate concentrations ranged from less than 0.04 to 6.74 milligrams per liter as nitrogen (mg/L as N) and were significantly lower in water samples with dissolved-oxygen concentrations less than 0.5 mg/L than in samples with dissolved-oxygen concentrations greater than or equal to 0.5 mg/L. Chloride/bromide mass ratios and tracers of groundwater age (tritium, chlorofluorocarbons, and sulfur hexafluoride) indicate that septic-system effluent or animal waste was a source of nitrate in some young groundwater (less than 50 years), although other sources such as fertilizer also may have contributed nitrate to the groundwater. Nitrate and nitrogen gas (N2) concentrations indicate that denitrification was the primary sink for nitrate in anoxic groundwater, removing 99 percent of the original nitrate content in some samples that had nitrate concentrations greater than 10 mg/L as N at the time of recharge. Methane concentrations ranged from less than 0.0005 to 32.5 mg/L and were significantly higher in water samples with dissolved-oxygen concentrations less than 0.5 mg/L than in samples with dissolved-oxygen concentrations greater than or equal to 0.5 mg/L. High methane concentrations (greater than 1 mg/L) in some samples were biogenic in origin and appeared to be derived from a relatively deep source on the basis of helium concentrations and isotopic data. One such sample had water-isotopic and major-ion compositions similar to that of produced water from the underlying Mesaverde Group, which was the primary natural-gas producing interval in the study area. Methane in the Mesaverde Group was largely thermogenic in origin so biogenic methane in the sample probably was derived from deeper zones in the Wasatch Formation. The primary methane sink in the aquifer appeared to be methane oxidation on the basis of dissolved-oxygen and methane concentrations and methane isotopic data. The diverse data sets used in this study enhance previous water-quality assessments by providing new and more complete insights into the sources and sinks of nitrate and methane in groundwater. Field measurements of dissolved oxygen in groundwater were useful indicators of the Wasatch Formation's vulnerability to nitrate and methane contamination or enrichment. Results from this study also provide new evidence for the movement of water, ions, and gases into the shallow Wasatch Formation from sources such as the Mesaverde Group and deeper Wasatch Formation.

Scientific Investigations Report↗
USGS2001

The role of native birds and other wildlife on the emergence of zoonotic diseases

Wildlife can be an important source of transmission of infectious disease to humans. One potential transmission route involves hunting and fishing, both common activities in the United States and worldwide. For example, during 1996, approximately 11 million Americans, about 40 percent of the total population 16 years of age and older, took part in some recreational activity relating to wildlife and fish. Another potential route of infection focuses on urban and suburban environments. These locations are of special concern because of their increasing role as wildlife habitat, the greater interface between humans and wildlife that takes place within those environments, the paucity of knowledge about disease in those wildlife populations, and the general lack of orderly management for wildlife within those environments. In the wild, several trends are contributing to the growing importance of zoonotic diseases. First, the spectrum of infectious diseases affecting wildlife today is greater than at any time during the previous century. Second, the occurrence of infectious diseases has changed, from sporadic, self-limiting outbreaks that generally resulted in minor losses to frequently occurring events that generally result in major losses of wildlife. Third, disease emergence has occurred on a worldwide scale in a broad spectrum of wildlife species and habitats. Given the scope of the problem, current disease surveillance efforts are inadequate. Few state wildlife agencies allocate personnel and resources to address wildlife disease, despite their statutory responsibility for managing nonmigratory wildlife. Some state agencies provide minimal support for regional programs based at universities. At the federal level, the primary surveillance effort is conducted by the National Wildlife Health Center, operated by the U.S. Geological Survey. Outside of government, some veterinary schools, agriculture diagnostic laboratories, and other programs provide additional information on animal diseases, primarily by examining carcasses of dead wildlife submitted for analysis, and individual university-based researchers carry out a variety of studies. Typically, information about the occurrence of disease in free-ranging wildlife is derived from surveys and mortality events in areas where wildlife observations by agencies and the public are frequent enough to detect their occurrence before carcasses are removed by scavengers and predatory animals. The result is that disease occurrence is grossly underreported, heavily biased toward mortality events, and biased toward species of special concern and interest, such as game and endangered species. Therefore, the available information should be viewed as the “proverbial tip of the iceberg” relative to disease activity within wildlife populations.

National Academy of Science.↗
USGS1992

Crystalline Silica Primer

Crystalline silica is the scientific name for a group of minerals composed of silicon and oxygen. The term crystalline refers to the fact that the oxygen and silicon atoms are arranged in a threedimensional repeating pattern. This group of minerals has shaped human history since the beginning of civilization. From the sand used for making glass to the piezoelectric quartz crystals used in advanced communication systems, crystalline silica has been a part of our technological development. Crystalline silica's pervasiveness in our technology is matched only by its abundance in nature. It's found in samples from every geologic era and from every location around the globe. Scientists have known for decades that prolonged and excessive exposure to crystalline silica dust in mining environments can cause silicosis, a noncancerous lung disease. During the 1980's, studies were conducted that suggested that crystalline silica also was a carcinogen. As a result of these findings, crystalline silica has been regulated under the Occupational Safety and Health Administration's (OSHA) Hazard Communication Standard (HCS). Under HCS, OSHAregulated businesses that use materials containing 0.1% or more crystalline silica must follow Federal guidelines concerning hazard communication and worker training. Although the HCS does not require that samples be analyzed for crystalline silica, mineral suppliers or OSHAregulated businesses may choose to do so if they wish to show that they are exempt from the requirements of HCS. Because crystalline silica is an extremely common mineral and the HCS will affect many mineral commodities, it is important then, that there be as clear an understanding as possible of what is and what is not crystalline silica, and where it is found and used, and how it is qualitatively and quantitatively identified. This primer is an attempt to accomplish this in as nontechnical a manner as possible. This primer will examine crystalline silica. Part I will describe, in nonscientific terms, what crystalline silica is and how we come in contact with it. Part II will discuss the regulatory decisions that have created new interest in this ancient and widespread substance and will present a nontechnical overview of the techniques used to measure crystalline silica. Because this primer is meant to be a starting point for anyone interested in learning more about crystalline silica, a list of selected readings and other resources is included. The detailed glossary, which defines many terms that are beyond the scope of this publication, is designed to help the reader move from this presentation to a more technical one, the inevitable next step.

Special Publication↗
USGS2005

Environmental contaminants and biomarker responses in fish from the Rio Grande and its U.S. tributaries: Spatial and temporal trends

We collected, examined, and analyzed 368 fish of seven species from 10 sites on rivers of the Rio Grande Basin (RGB) during late 1997 and early 1998 to document temporal and geographic trends in the concentrations of accumulative contaminants and to assess contaminant effects on the fish. Sites were located on the mainstem of the Rio Grande and on the Arroyo Colorado and Pecos River in Texas (TX), New Mexico (NM), and Colorado. Common carp (Cyprinus carpio) and largemouth bass (Micropterus salmoides) were the targeted species. Fish were examined in the field for internal and external visible gross lesions, selected organs were weighed to compute ponderal and organosomatic indices, and samples of tissues and fluids were obtained and preserved for analysis of fish health and reproductive biomarkers. Whole fish from each station were composited by species and gender and analyzed for organochlorine chemical residues and elemental contaminants using instrumental methods, and for 2,3,7,8-tetrachloro dibenzo-p-dioxin-like activity (TCDD-EQ) using the H4IIE rat hepatoma cell bioassay. Overall, fish from lower RGB stations contained greater concentrations of organochlorine pesticide residues and appeared to be less healthy than those from sites in the central and upper parts of the basin, as indicated by a general gradient of residue concentrations and biomarker responses. A minimal number of altered biomarkers and few or no elevated contaminant concentrations were noted in fish from the upper RGB. The exception was elevated concentrations [up to 0.46 ??g/g wet-weight (ww)] of total mercury (Hg) in predatory species from the Rio Grande at Elephant Butte Reservoir, NM, a condition documented in previous studies. Arsenic (As) and selenium (Se) concentrations were greatest in fish from sites in the central RGB; Se concentrations in fish from the Pecos River at Red Bluff Lake, TX and from the Rio Grande at Langtry, TX and Amistad International Reservoir, TX exceeded published fish and wildlife toxicity thresholds. In the lower RGB, residues of p,p???-DDT metabolites (???1.69 ??g/g ww), chlordane-related compounds (???0.21 ??g/g ww), dieldrin (???0.0.05 ??g/g ww), and toxaphene (???2.4 ??g/g ww) were detected in fish from most sites; maximum concentrations were in channel catfish (Ictalurus punctatus) from the Arroyo Colorado at Harlingen, TX. Concentrations of one or more residues exceeded toxicity thresholds for fish and wildlife in fish from this site and from the Rio Grande at Mission, TX and Brownsville, TX; however, concentrations were lower than those reported by previous studies. In addition, the proportional concentrations of p,p???-DDT at all sites were low, indicating weathered DDT rather than the influx of new material. Concentrations of total PCBs (<0.05 ??g/g ww) and TCDD-EQ (???6 pg/g ww) were comparatively low in all samples. Hepatic ethoxyresorufin O-deethylase (EROD) activity in some fish was elevated relative to reference rates at most sites, but was generally lower than previously reported activity in fish from heavily contaminated locations. The comparatively low PCB and TCDD-EQ concentrations together with elevated EROD activity may reflect exposure to polycyclic aromatic hydrocarbons. Reproductive biomarkers were consistent with chronic contaminant exposure at lower RGB sites; comparatively large percentages of intersex male largemouth bass, relatively low gonadosomatic indices, and elevated plasma vitellogenin concentrations in male fish were noted at three of the four stations. Large percentages of atretic eggs were also observed in the ovaries of female common carp from the Rio Grande at Brownsville, TX. Although many of the conditions noted may have other causes in addition to contaminant exposure, the biomarker results for the lower RGB sites are consistent with subtle responses of fish to contaminants, an interpretation supported by the chemical data of this and other investigations.

Science of the Total Environment↗
USGS2001

Evidence that coded-wire-tagging procedures can enhance transmission of Renibacterium salmoninarum in chinook salmon

Binary coded wire tags (CWTs) are used extensively for identification and management of anadromous salmonid populations. A study of bacterial kidney disease (BKD) in two brood year groups of hatchery-reared spring chinook salmon Oncorhynchus tshawytscha provided strong evidence that horizontal transmission of Renibacterium salmoninarum, the causative agent of BKD, might be enhanced by CWT-marking procedures. About 4 months after CWTs were implanted in the snouts of juvenile fish, 14-16 different tissues were sampled from each of 60 fish per brood year group for histological analysis. Of the fish that were positive for R. salmoninarum by histological examination, 41% (7 of 17) of the 1988 brood year fish and 24% (10 of 42) of the 1989 brood year fish had BKD lesions confined to the head near the site of tag implantation. These lesions often resulted in the destruction of tissues of one or both olfactory organs. No focal snout infections were observed in fish that had not been marked with CWTs. Further data obtained from tissue analyses by use of an enzyme-linked immunosorbent assay and a fluorescent antibody test for detection of R. salmoninarum supported the hypothesis that infections of R. salmoninarum can be initiated in the snout tissues of CWT-marked fish and then spread to other organs. The tagging procedures might promote transmission of the pathogen among fish via contaminated tagging needles, by facilitating the entry of pathogens through the injection wound, or both. Limited evidence from this study suggested that implantation of passive integrated transponder tags in the peritoneal cavities of fish might also promote the transmission of R. salmoninarum or exacerbate existing infections. The results indicated a need for strict sanitary procedures during the tagging of fish in populations positive for R. salmoninarum to reduce the probability of enhanced horizontal transmission of the pathogen.

Journal of Aquatic Animal Health↗
USGS2000

Organochlorine pesticides and PCBs in stream sediment and aquatic biota—initial results from the National Water-Quality Assessment Program, 1992–1995

One of the goals of the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey is to assess the status and trends in the nation's water quality and to understand the natural and anthropogenic factors that affect water-quality conditions. This report summarizes the occurrence and distribution of 33 organochlorine compounds in fluvial bed sediment and aquatic biota (whole freshwater fish and freshwater bivalves) sampled by NAWQA investigations between 1991 and 1994. These include historically used insecticides (DDT and metabolites, chlordane and its various components, and dieldrin), some currently used pesticides (permethrin and dacthal) and some industrial chemicals and byproducts (PCBs and hexaclorobenzene). Samples were collected at approximately 500 sites in 19 large hydrologic basins throughout the United States. Contaminant levels in bed sediment and aquatic biota are summarized, first on a national basis, and then by land-use classification (for example, urban, cropland, pasture and rangeland, and forest). Nationally, detection frequencies are highest in sediment and biota for the more persistent organochlorine compounds: total DDT, total chlordane, dieldrin, and total PCBs. Organochlorine compounds were detected more frequently in whole fish than in bivalves or bed sediment. Organochlorine pesticide concentrations were relatively high in agricultural regions with histories of high use. The highest organochlorine compound concentrations in both sediment and biota generally were associated with urban areas. Some organochlorine concentrations in sediment exceeded guidelines for the protection of aquatic organisms. A screening-level comparison of measured organochlorine concentrations in whole fish was made with human health guidelines that are applicable to edible fish. This comparison indicates stream sites at which additional sampling of game fish fillets may be warranted, depending on local patterns of fish consumption. A comparison of current national contaminant levels with previous studies of this scope suggests a gradual decrease in organochlorine contaminant levels, at least in fish.

Water-Resources Investigations Report↗