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Effects of climate change on forest vegetation in the Northern Rockies Region

The projected rapid changes in climate will affect the unique vegetation assemblages of the Northern Rockies region in myriad ways, both directly through shifts in vegetation growth, mortality, and regeneration, and indirectly through changes in disturbance regimes and interactions with changes in other ecosystem processes, such as hydrology, snow dynamics, and exotic invasions (Bonan 2008; Hansen and Phillips 2015; Hansen et al. 2001; Notaro et al. 2007). These impacts, taken collectively, could change the way vegetation is managed by public land agencies in this area. Some species may be in danger of rapid decreases in abundance, while others may undergo range expansion (Landhäusser et al. 2010). New vegetation communities may form, while historical vegetation complexes may simply shift to other areas of the landscape or become rare. Juxtaposed with climate change concerns are the consequences of other land management policies and past activities, such as fire exclusion, fuels treatments, and grazing. A thorough assessment of the responses of vegetation to projected climate change is needed, along with an evaluation of the vulnerability of important species, communities, and vegetation-related resources that may be influenced by the effects, both direct and indirect, of climate change. This assessment must also account for past management actions and current vegetation conditions and their interactions with future climates.

General Technical Report↗

Physical Climate Forces

Key Findings The coasts of the U.S. are home to many large urban centers and important infrastructure such seaports, airports, transportation routes, oil import and refining facilities, power plants, and military bases. All are vulnerable to varying degrees to impacts of global warming such as sea-level rise, storms, and flooding. High Confidence. Physical observations collected over the past several decades from the land, coasts, oceans, and the atmosphere, as well as environmental indicators, show that warming and some related environmental changes are occurring globally at rates greater than can be expected due to natural processes. These climate-related changes are highly varied, but some are likely due in large part to anthropogenically increased atmospheric concentrations of greenhouse gases and altered land surface properties. High Confidence. Findings from many independent scientific studies conclude that these changes are consistent with global warming. The primary changes observed are rising sea level and average global air, land, and ocean temperatures; heightening temperature and precipitation extremes in some regions; and increasing levels of oceans acidification and rates of glacier and ice sheet melt. High Confidence. Most coastal landforms, such as barrier islands, deltas, bays, estuaries, wetlands, coral reefs, are highly dynamic and sensitive to even small changes in physical forces and feedbacks such as warming, storms, ocean circulation, waves and currents, flooding, sediment budgets, and sea-level rise. High Confidence. The effects of sea-level rise on coasts vary considerably from region-to-region and over a range of spatial and temporal scales. Land subsidence in certain locations causes relative sea-level rise to exceed global mean sea-level rise. Land uplift such as that found in Alaska and the Northwestern Pacific coast can reduce effects of global mean rise. The effects will be greatest and most immediate on low-relief, low-elevation parts of the U.S. coast along the Gulf of Mexico, mid-Atlantic states, northern Alaska, Hawaii, and island territories and especially on coasts containing deltas, coastal plains, tidal wetlands, bays, estuaries, and coral reefs. Beaches and wetlands on steep cliff coasts and shores backed with seawalls may be unable to move landward or maintain their landform with sea-level rise. Many areas of the coast are especially vulnerable because of the often detrimental effects of development on natural processes. High Confidence. The gradual inundation from recent sea-level rise is evident in many regions such as the mid-Atlantic and Louisiana where high tides regularly flood roads and areas that were previously dry, and in stands of “ghost forests,” in which trees are killed by intrusion of brackish water. High Confidence. Sea level change and storms are dominant driving forces of coastal change as observed in the geologic record of coastal landforms. Increasingly, sea-level rise will become a hazard for coastal regions because of continued global mean sea-level rise, including possibly accelerated rates of rise that increase risk to coastal regions. As the global climate continues to warm and ice sheets melt, coasts will become more dynamic and coastal cities and low-lying areas will be increasingly exposed to erosion, inundation, and flooding. High Confidence. No coordinated, interagency process exists in the U.S. for identifying agreed upon global mean sea-level rise projections for the purpose of coastal planning, policy, or management, even though this is a critical first step in assessing coastal impacts and vulnerabilities. High Confidence. Global sea level rose at a rate of 1.7 millimeters/year during the 20th century. The rate has increased to over 3 millimeters/year in the past 20 years and scientific studies suggest high confidence (>9 in 10 chance) that global mean sea level will rise 0.2 to 2 meters by the end of this century. Some regions such as Louisiana and the Chesapeake Bay will experience greater relative rise due to factors such as land subsidence, gravitational redistribution of ice-sheet meltwater, ocean circulation changes, and regional ocean thermostatic effects. Other regions undergoing land uplift, such as Alaska, will experience lesser sea-level rise. High Confidence. Variability in the location and time-of-year of storm genesis can influence landfalling storm characteristics, and even small changes can lead to large changes in landfalling location and impact. Although scientists have only low confidence in the sign of projected changes to the coast of storm-related hazards that depend on a combination of factors such as frequency, track, intensity, and storm size, any sea-level rise is virtually certain to exacerbate storm-related hazards. High Confidence. Although sea-level rise and climate change have occurred in the past, the increasing human presence in the coastal zone will make the impacts different for the future. Land use and other human activities often inhibit the natural response of physical processes and adaptation by plants and animals. In some areas, erosion and wetland loss are common because sediment budgets have been reduced, while, in other regions, excess sediment is in-filling harbors, channels, and bays. High Confidence. Observations continue to indicate an ongoing, warming-induced intensification of the hydrologic cycle that will likely result in heavier precipitation events and, combined with sea-level rise and storm surge, an increased flooding severity in some coastal areas, particularly the northeast U.S. Moderate Confidence. Temperature is primarily driving environmental change in the Alaskan coastal zone. Sea ice and permafrost make northern regions particularly susceptible to temperature change. For example, an increase of two degrees Celsius could basically transform much of Alaska from frozen to unfrozen, with extensive implications. Portions of the north and west coast of Alaska are seeing dramatic increases in the rate of coastal erosion and flooding due to sea ice loss and permafrost melting. As a consequence, several coastal communities are planning to relocate to safer locations. Relocation is a difficult decision that is likely to become more common in the future for many coastal regions. High Confidence. Methane is a primary greenhouse gas. Large reserves of methane are bound-up in Alaska’s frozen permafrost. These are susceptible to disturbance and methane release if the Arctic continues to warm. The additional methane released may result in even greater greenhouse warming of the atmosphere. High Confidence.

Book chapter↗

Quantifying the spatial details of carbon sequestration potential and performance

Upscaling the spatial and temporal changes of carbon stocks and fluxes from sites to regions is challenging owing to the spatial and temporal variances and covariance of driving variables and the uncertainties in both the model and the input data. Although various modeling approaches have been developed to facilitate the upscaling process, few deal with error transfer from model input to output, and error propagation in time and space. The author has developed the General Ensemble Biogeochemical Modelling System (GEMS) for upscaling carbon stocks and fluxes from sites to regions with measures of uncertainty. This chapter describes the GEMS model, its application to regional- and larger-scale areas, and the new results that demonstrate the challenges of upscaling. GEMS relies on site-scale biogeochemical models to simulate carbon dynamics at the site scale. The spatial deployment of the site-scale model in GEMS is based on the spatial and temporal joint frequency distribution of major driving variables (e.g., land cover and land use change, climate, soils, disturbances, and management). At the site scale, GEMS uses stochastic ensemble simulations to incorporate input uncertainty to quantify uncertainty transfer from input to output, and to identify trends in both input data and simulation results. It permits one to simulate the range of possible permutations of input values and identify the trends and variance in both the input data and results. Using data assimilation techniques, GEMS simulations can be constrained by field and satellite observations, including estimates of net primary production (NPP) from the Moderate Resolution Imaging Spectroradiometer (MODIS), grain yield and cropping practices, and forest inventories. The modeling philosophy embedded in GEMS makes it ideal for assimilating information with various uncertainties to support estimating the spatial details of carbon sequestration potential as well as dynamic monitoring of the performance of carbon sequestration activities over large areas. As a case study, GEMS is applied to simulate the spatial and temporal details of carbon sources, sinks, and uncertainty in the Ridge and Valley ecoregion in the eastern United States

Book chapter↗

Biogeography of boreal passerine range dynamics in western North America: past, present, and future

Many of the Neotropical migrant bird species that breed throughout the Canadian boreal region are not found in the Alaskan boreal region, separated by the northwestern cordilleran mountains, despite the presence of climatically suitable habitat. We asked whether biological or climatic factors constrain certain species from crossing this geographic barrier. Analyzing a comprehensive dataset for 80 boreal passerine species, we used phylogenetic logistic regression to evaluate the relative importance of physical, migratory and competition metrics versus current and paleoclimatic suitability factors. Controlling for current climatic suitability within boreal Alaska, we found that species with the greatest climatic suitability across the northwestern cordillera, presently and also during the mid-Holocene period, were most likely to be regular breeders in the Alaskan boreal region. Migratory strategy also played a role, but could not be disentangled from its strong phylogenetic basis. Our analysis suggests that the perceived barrier of the northwestern cordillera may be easily weakened as climate change improves conditions there for many forest species. The weakening of this barrier may lead to relatively rapid range expansions and the reshuffling of species communities. Species’ realized distributional shifts will be a function of the interplay between a changing climate and static topographic features.

Ecography: Pattern and Diversity in Ecology↗

Links between climate change, water-table depth, and water chemistry in a mineralized mountain watershed

Recent studies suggest that climate change is causing rising solute concentrations in mountain lakes and streams. These changes may be more pronounced in mineralized watersheds due to the sensitivity of sulfide weathering to changes in subsurface oxygen transport. Specific causal mechanisms linking climate change and accelerated weathering rates have been proposed, but in general remain entirely hypothetical. For mineralized watersheds, a favored hypothesis is that falling water tables caused by declining recharge rates allow an increasing volume of sulfide-bearing rock to become exposed to air, thus oxygen. Here, we test the hypothesis that falling water tables are the primary cause of an increase in metals and SO4 (100-400%) observed since 1980 in the Upper Snake River (USR), Colorado. The USR drains an alpine watershed geologically and climatologically representative of many others in mineralized areas of the western U.S. Hydrologic and chemical data collected from 2005 to 2011 in a deep monitoring well (WP1) at the top of the USR watershed are utilized. During this period, both water table depths and groundwater SO4 concentrations have generally increased in the well. A numerical model was constructed using TOUGHREACT that simulates pyrite oxidation near WP1, including groundwater flow and oxygen transport in both saturated and unsaturated zones. The modeling suggests that a falling water table could produce an increase in metals and SO4 of a magnitude similar to that observed in the USR (up to 300%). Future water table declines may produce limited increases in sulfide weathering high in the watershed because of the water table dropping below the depth of oxygen penetration, but may continue to enhance sulfide weathering lower in the watershed where water tables are shallower. Advective air (oxygen) transport in the unsaturated zone caused by seasonally variable recharge and associated water table fluctuations was found to have little influence on pyrite oxidation rates near WP1. However, this mechanism could be important in the case of a shallow dynamic water table and more abundant/reactive sulfides in the shallow subsurface. Data from WP1 and numerical modeling results are thus consistent with the falling water table hypothesis, and illustrate fundamental processes linking climate and sulfide weathering in mineralized watersheds.

Applied Geochemistry↗

Lake oxygen isotopes as recorders of North American Rocky Mountain hydroclimate: Holocene patterns and variability at multi-decadal to millennial time scales

Lake sediment oxygen isotope records (calcium carbonate-δ 18 O) in the western North American Cordillera developed during the past decade provide substantial evidence of Pacific ocean–atmosphere forcing of hydroclimatic variability during the Holocene. Here we present an overview of 18 lake sediment δ 18 O records along with a new compilation of lake water δ 18 O and δ 2 H that are used to characterize lake sediment sensitivity to precipitation-δ 18 O in contrast to fractionation by evaporation. Of the 18 records, 14 have substantial sensitivity to evaporation. Two records reflect precipitation-δ 18 O since the middle Holocene, Jellybean and Bison Lakes, and are geographically positioned in the northern and southern regions of the study area. Their comparative analysis indicates a sequence of time-varying north–south precipitation-δ 18 O patterns that is evidence for a highly non-stationary influence by Pacific ocean–atmosphere processes on the hydroclimate of western North America. These observations are discussed within the context of previous research on North Pacific precipitation-δ 18 O based on empirical and modeling methods. The Jellybean and Bison Lake records indicate that a prominent precipitation-δ 18 O dipole (enriched-north and depleted-south) was sustained between ~ 3.5 and 1.5 ka, which contrasts with earlier Holocene patterns, and appears to indicate the onset of a dominant tropical control on North Pacific ocean–atmosphere dynamics. This remains the state of the system today. Higher frequency reversals of the north–south precipitation-δ 18 O dipole between ~ 2.5 and 1.5 ka, and during the Medieval Climate Anomaly and the Little Ice Age, also suggest more varieties of Pacific ocean–atmosphere modes than a single Pacific Decadal Oscillation (PDO) type analogue. Results indicate that further investigation of precipitation-δ 18 O patterns on short (observational) and long (Holocene) time scales is needed to improve our understanding of the processes that drive regional precipitation-δ 18 O responses to Pacific ocean–atmosphere variability, which in turn, will lead to a better understanding of internal Pacific ocean–atmosphere variability and its response to external climate forcing mechanisms.

North American Rocky Mountain↗

Spring weather influences breeding propensity, the most important productivity component for Arctic-nesting lesser snow geese

Animal reproduction is composed of several stages, which collectively determine overall productivity. Yet, it is not fully understood how different productivity components contribute to population change. To bridge this gap, we leveraged integrated population modelling and transient life-table response experiments, together with population-level data on lesser snow geese ( Anser caerulescens caerulescens ) breeding on Wrangel Island, Russia, from 1970 to 2022. We assessed contributions of breeding propensity, clutch size, nest success, egg survival, hatching success and pre-fledging survival to population change, and tested hypotheses about the effects of environmental drivers and density dependence on different components. Breeding propensity contributed the most to variation in population growth, followed by nest success. These two components were negatively affected by the timing of snow melt. We found no overall deleterious effects of climate change on productivity. Density dependence had a positive effect on multiple productivity components, likely through predator swamping. Our results show the importance of breeding propensity to the population dynamics of this long-lived animal, which is notable because this productivity component is often overlooked. Our results also demonstrate that the effects of environmental conditions and density dependence can differ among animal populations of different sizes, locations and life histories.

Wrangel Island↗

Potentiometric Surface of the Upper Floridan Aquifer, West-Central Florida, May 2009

The Floridan aquifer system consists of the Upper and Lower Floridan aquifers separated by the middle confining unit. The middle confining unit and the Lower Floridan aquifer in west-central Florida generally contain highly mineralized water. The water-bearing units containing fresh water are herein referred to as the Upper Floridan aquifer. The Upper Floridan aquifer is the principal source of water in the Southwest Florida Water Management District and is used for major public supply, domestic use, irrigation, and brackish water desalination in coastal communities (Southwest Florida Water Management District, 2000). This map report shows the potentiometric surface of the Upper Floridan aquifer measured in May 2009. The potentiometric surface is an imaginary surface connecting points of equal altitude to which water will rise in tightly-cased wells that tap a confined aquifer system (Lohman, 1979). This map represents water-level conditions near the end of the dry season, when ground-water levels usually are at an annual low and withdrawals for agricultural use typically are high. The cumulative average rainfall of 48.53 inches for west-central Florida (from June 2008 through May 2009) was 4.12 inches below the historical cumulative average of 52.65 inches (Southwest Florida Water Management District, 2009). Historical cumulative averages are calculated from regional rainfall summary reports (1915 to most recent complete calendar year) and are updated monthly by the Southwest Florida Water Management District. This report, prepared by the U.S. Geological Survey in cooperation with the Southwest Florida Water Management District, is part of a semi-annual series of Upper Floridan aquifer potentiometric-surface map reports for west-central Florida. Potentiometric-surface maps have been prepared for January 1964, May 1969, May 1971, May 1973, May 1974, and for each May and September since 1975. Water-level data are collected in May and September each year to show the approximate annual low and high water-level conditions, respectively. Most of the water-level data for this map were collected by the U.S. Geological Survey during the period May 18-22, 2009. Supplemental water-level data were collected by other agencies and companies. A corresponding potentiometric-surface map was prepared for areas east and north of the Southwest Florida Water Management District boundary by the U.S. Geological Survey office in Orlando, Florida (Kinnaman and Dixon, 2009). Most water-level measurements were made during a 5-day period; therefore, measurements do not represent a 'snapshot' of conditions at a specific time, nor do they necessarily coincide with the seasonal low water-level condition. The potentiometric contours are generalized to synoptically portray the head in a dynamic hydrologic system, taking due account of the variations in hydrogeologic conditions, such as differing depths of wells, nonsimultaneous measurements of water levels, variable effects of pumping, and changing climatic influence. The potentiometric contours may not conform exactly with the individual measurements of water levels.

Scientific Investigations Map↗

Toward a social-ecological theory of forest macrosystems for improved ecosystem management

The implications of cumulative land-use decisions and shifting climate on forests, require us to integrate our understanding of ecosystems, markets, policy, and resource management into a social-ecological system. Humans play a central role in macrosystem dynamics, which complicates ecological theories that do not explicitly include human interactions. These dynamics also impact ecological services and related markets, which challenges economic theory. Here, we use two forest macroscale management initiatives to develop a theoretical understanding of how management interacts with ecological functions and services at these scales and how the multiple large-scale management goals work either in consort or conflict with other forest functions and services. We suggest that calling upon theories developed for organismal ecology, ecosystem ecology, and ecological economics adds to our understanding of social-ecological macrosystems. To initiate progress, we propose future research questions to add rigor to macrosystem-scale studies: (1) What are the ecosystem functions that operate at macroscales, their necessary structural components, and how do we observe them? (2) How do systems at one scale respond if altered at another scale? (3) How do we both effectively measure these components and interactions, and communicate that information in a meaningful manner for policy and management across different scales?

Forests↗

Structure, diversity, and biophysical properties of old-growth forestsin the Klamath region, USA

The diverse old-growth forests in Klamath region of northern California and southern Oregon provide valuable ecosystem services (e.g., maintaining watersheds, wildlife habitat, recreation), but may be vulnerable to a wide range of stressors, including invasive species, disrupted disturbance regimes, and climatic change. Yet our understanding of how forest structure in the Klamath region relates to the current physical environment is limited. Here we provide present-day benchmarks for old-growth forest structure across a climatic gradient ranging from coastal to dry interior sites. We established 16 large (1 ha) forest plots where all stems > 5 cm in diameter were identified to species and mapped. Climate across these sites was highly variable, with estimated actual evapotranspiration correlated to several basic measures of forest structure, including plot basal area, stem size-class inequality, tree species diversity and, to a lesser extent, tree species richness. Analyses of the spatial arrangement of stems indicated a high degree of non-uniformity, with 75% of plots showing significant stem clumping at small spatial scales (0 to 10 m). Downscaled predictions of future site water balance suggest changes will be dominated by rapidly increasing climatic water deficit (D, a biologically meaningful index of drought). While these plots give a picture of current conditions, continued monitoring of these stands is needed to describe forest dynamics and to detect forest responses to ongoing and future stressors.

Klamath region↗

Synthesizing professional opinion of Lake Whitefish and Cisco recruitment drivers across the Great Lakes

Disentangling the suite of ecological drivers that explain recruitment variability for Lake Whitefish Coregonus clupeaformis and Cisco C. artedi is of critical importance for their conservation, management, and stewardship in the Laurentian Great Lakes. However, recruitment is inherently variable and can be regulated by many interacting processes, the relative importance of which can vary spatially, temporally, and ontogenetically. Given this complexity, comparisons across lakes and species that identify overarching hypotheses could efficiently guide future research. Using facilitated deliberations among fishery professionals (n = 57) with expertise in Great Lakes Coregonus spp., we synthesized current knowledge regarding (1) which biophysical processes are most important for driving contemporary recruitment between species, among lakes, and across life stages and (2) mechanisms by which those drivers regulate recruitment at key life stages. Participants affirmed the hypothesis that many drivers interact in complex ways to regulate Lake Whitefish and Cisco recruitment. Large-scale climatic processes affecting early life-stage growth and survival were consistently considered important. Other drivers were only deemed influential in certain lakes, highlighting perceived context-dependent recruitment dynamics. Notably, recruitment in Lakes Superior, Michigan, and Huron was considered limited during larval and early juvenile life stages by low productivity, whereas spawning-habitat degradation and reduced metapopulation diversity were hypothesized to limit recruitment during embryonic and larval stages in Lakes Erie and Ontario. Several drivers were hypothesized to similarly impact Lake Whitefish and Cisco during early life stages, while drivers acting on post-larval life stages were typically distinct between species. The hypotheses synthesized herein can guide future research on Lake Whitefish and Cisco recruitment dynamics in the Great Lakes.

Great Lakes↗

Sea-level rise and warming mediate coastal groundwater discharge in the Arctic

Groundwater discharge is an important mechanism through which fresh water and associated solutes are delivered to the ocean. Permafrost environments have traditionally been considered hydrogeologically inactive, yet with accelerated climate change and permafrost thaw, groundwater flow paths are activating and opening subsurface connections to the coastal zone. While warming has the potential to increase land-sea connectivity, sea-level change has the potential to alter land-sea hydraulic gradients and enhance coastal permafrost thaw, resulting in a complex interplay that will govern future groundwater discharge dynamics along Arctic coastlines. Here, we use a recently developed permafrost hydrological model that simulates variable-density groundwater flow and salinity-dependent freeze-thaw to investigate the impacts of sea-level change and land and ocean warming on the magnitude, spatial distribution, and salinity of coastal groundwater discharge. Results project both an increase and decrease in discharge with climate change depending on the rate of warming and sea-level change. Under high warming and low sea-level rise scenarios, results show up to a 58% increase in coastal groundwater discharge by 2100 due to the formation of a supra-permafrost aquifer that enhances freshwater delivery to the coastal zone. With higher rates of sea-level rise, the increase in discharge due to warming is reduced to 21% as sea-level rise decreased land-sea hydraulic gradients. Under lower warming scenarios for which supra-permafrost groundwater flow was not established, discharge decreased by up to 26% between 1980 and 2100 for high sea-level rise scenarios and increased only 8% under low sea-level rise scenarios. Thus, regions with higher warming rates and lower rates of sea-level change (e.g. northern Nunavut, Canada) will experience a greater increase in discharge than regions with lower warming rates and higher rates of sea-level change. The magnitude, location and salinity of discharge have important implications for ecosystem function, water quality, and carbon dynamics in coastal zones.

Environmental Research Letters↗

Review and synthesis: Changing permafrost in a warming world and feedbacks to the Earth System

The permafrost component of the cryosphere is changing dramatically, but the permafrost region is not well monitored and the consequences of change are not well understood. Changing permafrost interacts with ecosystems and climate on various spatial and temporal scales. The feedbacks resulting from these interactions range from local impacts on topography, hydrology, and biology to complex influences on global scale biogeochemical cycling. This review contributes to this focus issue by synthesizing its 28 multidisciplinary studies which provide field evidence, remote sensing observations, and modeling results on various scales. We synthesize study results from a diverse range of permafrost landscapes and ecosystems by reporting key observations and modeling outcomes for permafrost thaw dynamics, identifying feedbacks between permafrost and ecosystem processes, and highlighting biogeochemical feedbacks from permafrost thaw. We complete our synthesis by discussing the progress made, stressing remaining challenges and knowledge gaps, and providing an outlook on future needs and research opportunities in the study of permafrost–ecosystem–climate interactions.

Environmental Research Letters↗

Process-based models and studies of coastal change to inform habitat restoration and climate change adaptation

Puget Sound salmon and estuary recovery strategies identify tens of thousands of acres of floodplain and estuary habitat restoration needed to re-establish ecosystem functions lost or degraded from western land use (Simenstad et al., 2011); the extent for nearshore habitat remains uncertain. Sediment is critical for shaping the structure and functions of these ecosystems and the success of many habitat recovery strategies. This is particularly important in the Pacific Northwest, where high sediment flux through the coastal zone makes it a more dynamic ecosystem driver than other regions where estuary restoration guidance has been developed and especially for extensive marshes and floodplains that have subsided due to lost sediment delivery from placement of flow control (flood protection) structures (Grossman et al., 2020). Fluvial sediment delivery to Puget Sound is expected to greatly increase in many systems under projected climate change (Lee et al., 2016), requiring better models and tools to evaluate complex ecosystem responses. Guidance for estuary habitat recovery (e.g., Clancy et al., 2009) rests on a paradigm of restoring historic habitats and connectivity by simply removing or lowering levees assuming sediment delivery and accumulation will occur. Outcomes of several restoration projects and studies show that restoring “opportunity” for sediment delivery may not be enough. Improved knowledge and predictive models of land-use and climate change effects on sediment budgets, sediment properties, and coastal change can refine restoration guidance to evaluate quantitative expectations for sediment flux, composition, accumulation, and timing critical to achieving more effective recovery, resilience, and community support.

Conference Paper↗

Estimating indices of range shifts in birds using dynamic models when detection is imperfect

There is intense interest in basic and applied ecology about the effect of global change on current and future species distributions. Projections based on widely used static modeling methods implicitly assume that species are in equilibrium with the environment and that detection during surveys is perfect. We used multiseason correlated detection occupancy models, which avoid these assumptions, to relate climate data to distributional shifts of Louisiana Waterthrush in the North American Breeding Bird Survey (BBS) data. We summarized these shifts with indices of range size and position and compared them to the same indices obtained using more basic modeling approaches. Detection rates during point counts in BBS surveys were low, and models that ignored imperfect detection severely underestimated the proportion of area occupied and slightly overestimated mean latitude. Static models indicated Louisiana Waterthrush distribution was most closely associated with moderate temperatures, while dynamic occupancy models indicated that initial occupancy was associated with diurnal temperature ranges and colonization of sites was associated with moderate precipitation. Overall, the proportion of area occupied and mean latitude changed little during the 1997–2013 study period. Near-term forecasts of species distribution generated by dynamic models were more similar to subsequently observed distributions than forecasts from static models. Occupancy models incorporating a finite mixture model on detection – a new extension to correlated detection occupancy models – were better supported and may reduce bias associated with detection heterogeneity. We argue that replacing phenomenological static models with more mechanistic dynamic models can improve projections of future species distributions. In turn, better projections can improve biodiversity forecasts, management decisions, and understanding of global change biology.

Global Change Biology↗

Identifying drivers of population dynamics for a stream breeding amphibian using time series of egg mass counts

The decline in amphibian populations is one of the starkest examples of the biodiversity crisis. For stream breeding amphibians, alterations to natural flow regimes by dams, water diversions, and climate change have been implicated in declines and extirpations. Identifying drivers of amphibian declines requires long time series of abundance data because amphibian populations can exhibit high natural variability. Multiple population viability analysis (MPVA) models integrate abundance data and share information from different populations to estimate how environmental factors influence population growth. Flow alteration has been linked to declines and extirpations in the Foothill Yellow-legged Frog ( Rana boylii ), a stream breeding amphibian native to California and Oregon. To date, no study has jointly analyzed abundance data from populations throughout the range of R. boylii in an MPVA model. We compiled time series of egg mass counts (an index of adult female abundance) from R. boylii populations in 36 focal streams and fit an MPVA model to quantify how streamflow metrics, stream temperature, and surrounding land cover affect population growth. We found population growth was positively related to stream temperature and was higher in the years following a wet year with high total annual streamflow. Density dependence was weakest (i.e., carrying capacity was highest) for streams with high seasonality of streamflow and intermediate rates of change in streamflow during spring. Our results highlight how altered streamflow can further increase the risk of decline for R. boylii populations. Managing stream conditions to better match natural flow and thermal regimes would benefit the conservation of R. boylii populations.

California, Oregon↗

Cosmic dust reveals dynamic shifts in central Arctic sea-ice coverage over the past 30,000 years

Arctic sea-ice loss affects biological productivity, sustenance in coastal communities, and geopolitics. Forecasting these impacts requires mechanistic understanding of how Arctic sea ice responds to climate change, but this is limited by scarce long-term records. We present continuous 30,000-year reconstructions of sea-ice coverage from the Arctic Ocean based on measurements of two isotopes, thorium-230 and extraterrestrial helium-3, whose burial ratio changes with sea-ice coverage. We found that the central Arctic was perennially covered by sea ice during the last glaciation. Sea-ice cover retreated during the deglaciation approximately 15,000 years ago, culminating in seasonal sea-ice coverage in the warm early Holocene, before ice coverage increased into the late Holocene. Sea-ice changes closely correlate with biological nutrient consumption, supporting projections of a nutrient-starved central Arctic Ocean with continued sea-ice loss.

Science↗

Shallow groundwater in the Matanuska-Susitna Valley, Alaska—Conceptualization and simulation of flow

The Matanuska-Susitna Valley is in the Upper Cook Inlet Basin and is currently undergoing rapid population growth outside of municipal water and sewer service areas. In response to concerns about the effects of increasing water use on future groundwater availability, a study was initiated between the Alaska Department of Natural Resources and the U.S. Geological Survey. The goals of the study were (1) to compile existing data and collect new data to support hydrogeologic conceptualization of the study area, and (2) to develop a groundwater flow model to simulate flow dynamics important at the regional scale. The purpose of the groundwater flow model is to provide a scientific framework for analysis of regional-scale groundwater availability. To address the first study goal, subsurface lithologic data were compiled into a database and were used to construct a regional hydrogeologic framework model describing the extent and thickness of hydrogeologic units in the Matanuska-Susitna Valley. The hydrogeologic framework model synthesizes existing maps of surficial geology and conceptual geochronologies developed in the study area with the distribution of lithologies encountered in hundreds of boreholes. The geologic modeling package Geological Surveying and Investigation in Three Dimensions (GSI3D) was used to construct the hydrogeologic framework model. In addition to characterizing the hydrogeologic framework, major groundwater-budget components were quantified using several different techniques. A land-surface model known as the Deep Percolation Model was used to estimate in-place groundwater recharge across the study area. This model incorporates data on topography, soils, vegetation, and climate. Model-simulated surface runoff was consistent with observed streamflow at U.S. Geological Survey streamgages. Groundwater withdrawals were estimated on the basis of records from major water suppliers during 2004-2010. Fluxes between groundwater and surface water were estimated during field investigations on several small streams. Regional groundwater flow patterns were characterized by synthesizing previous water-table maps with a synoptic water-level measurement conducted during 2009. Time-series water-level data were collected at groundwater and lake monitoring stations over the study period (2009–present). Comparison of historical groundwater-level records with time-series groundwater-level data collected during this study showed similar patterns in groundwater-level fluctuation in response to precipitation. Groundwater-age data collected during previous studies show that water moves quickly through the groundwater system, suggesting that the system responds quickly to changes in climate forcing. Similarly, the groundwater system quickly returns to long-term average conditions following variability due to seasonal or interannual changes in precipitation. These analyses indicate that the groundwater system is in a state of dynamic equilibrium, characterized by water-level fluctuation about a constant average state, with no long-term trends in aquifer-system storage. To address the second study goal, a steady-state groundwater flow model was developed to simulate regional groundwater flow patterns. The groundwater flow model was bounded by physically meaningful hydrologic features, and appropriate internal model boundaries were specified on the basis of conceptualization of the groundwater system resulting in a three-layer model. Calibration data included 173 water‑level measurements and 18 measurements of streamflow gains and losses along small streams. Comparison of simulated and observed heads and flows showed that the model accurately simulates important regional characteristics of the groundwater flow system. This model is therefore appropriate for studying regional-scale groundwater availability. Mismatch between model-simulated and observed hydrologic quantities is likely because of the coarse grid size of the model and seasonal transient effects. Next steps towards model refinement include the development of a transient groundwater flow model that is suitable for analysis of seasonal variability in hydraulic heads and flows. In addition, several important groundwater budget components remain poorly quantified—including groundwater outflow to the Matanuska River, Little Susitna River, and Knik Arm.

Alaska↗