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Global research priorities to mitigate plastic pollution impacts on marine wildlife

Marine wildlife faces a growing number of threats across the globe, and the survival of many species and populations will be dependent on conservation action. One threat in particular that has emerged over the last 4 decades is the pollution of oceanic and coastal habitats with plastic debris. The increased occurrence of plastics in marine ecosystems mirrors the increased prevalence of plastics in society, and reflects the high durability and persistence of plastics in the environment. In an effort to guide future research and assist mitigation approaches to marine conservation, we have generated a list of 16 priority research questions based on the expert opinions of 26 researchers from around the world, whose research expertise spans several disciplines, and covers each of the world’s oceans and the taxa most at risk from plastic pollution. This paper highlights a growing concern related to threats posed to marine wildlife from microplastics and fragmented debris, the need for data at scales relevant to management, and the urgent need to develop interdisciplinary research and management partnerships to limit the release of plastics into the environment and curb the future impacts of plastic pollution.

Endangered Species Research↗

Global trends in emerging viral diseases of wildlife origin

Fifty years ago, infectious diseases were rarely considered threats to wildlife populations, and the study of wildlife diseases was largely a neglected endeavor. Furthermore, public health leaders at that time had declared that “it is time to close the book on infectious diseases and the war against pestilence won,” a quote attributed to Dr. William H. Stewart in 1967. There is some debate whether he actually said these words; however, they reflect the widespread belief at that time (Spellberg, 2008). Leap forward to today, and the book on infectious diseases has been dusted off. There is general consensus that the global environment favors the emergence of infectious diseases, and in particular, diseases of wildlife origin (Taylor et al., 2001). Examples of drivers of these infectious diseases include climate and landscape changes, human demographic and behavior changes, global travel and trade, microbial adaptation, and lack of appropriate infrastructure for wildlife disease control and prevention (Daszak et al., 2001). The consequences of these emerging diseases are global and profound with increased burden on the public health system, negative impacts on the global economy and food security, declines and extinctions of wildlife species, and subsequent loss of ecosystem integrity. For example, 35 million people are currently living with HIV infection globally (http://www.who.int/gho/hiv/en); 400 million poultry have been culled since 2003 as a result of efforts to control highly pathogenic H5N1 avian influenza (http://www.fao.org/avianflu/en/index.html), and there are increasing biological and ecological consequences. Examples of health threats to biodiversity include the “spillover” of human diseases to great ape populations (Köndgen et al., 2008), the near-extirpation of the black-footed ferret from canine distemper and sylvatic plague (for a review see Abbott et al., 2012), and threats to Hawaiian forest birds from introduced pathogens such as avian malaria and avian pox (van Riper et al., 1986, 2002). There are also newly discovered pathogens or diseases that have resulted in population declines, and global extinctions of several species. Examples include Batrachochytrium dendrobatidis, which causes a cutaneous fungal infection of amphibians and is linked to declines of amphibians globally (Kriger and Hero, 2009); and recently discovered Pseudogymnoascus (Geomyces) destructans, the etiologic agent of white-nose syndrome (WNS), which has caused precipitous declines of North American bat species (Blehert et al., 2009). Furthermore, there is increasing evidence of the subsequent impacts on human and ecosystem health; for example, increasing risk of exposure to Lyme disease as a consequence of decreased biodiversity (LoGiudice et al., 2003) as well as the economic cost of the loss of bats due to decreased insect control services (Boyles et al., 2011). Figure A12-1 is a timeline of important diseases investigated by the U.S. Geological Survey since the 1970s, which illustrates three factors: 1. The unprecedented emergence of new pathogens and geographic spread of known pathogens since the 1990s; 2. Diseases are increasingly causing large-scale, negative impacts on wildlife populations and spreading over larger geographic areas rather than remaining localized; and 3. Diseases are increasingly of concern for multiple sectors, including public health, agriculture and wildlife management agencies. Of increasing concern are these novel diseases such as WNS as they are hard to anticipate, particularly devastating to human health or wildlife populations, challenging to manage, spread over large geographic areas in short time periods, and may result in ecological ripple effects that are difficult to predict. The following article provides examples of recently emerged viral diseases of wildlife origin. The examples have been selected to illustrate the drivers of emerging viral diseases, both novel pathogens and previously known diseases, the impacts of these diseases, as well as the role of wildlife both as “villains” or reservoirs as well as “victims” of these viral diseases. The article also discusses potential management strategies for emerging viral diseases in wildlife populations and future science directions in wildlife health to prevent, prepare, respond to, and recover from these disease events. Finally, the concept of One Health and its potential role in developing solutions to these issues of mutual concern is discussed.

Conference Paper↗

Effects of earthworms on slopewash, surface runoff, and fine-litter transport on a humid-tropical forested hillslope in eastern Puerto Rico: Chapter G in Water quality and landscape processes of four watersheds in eastern Puerto Rico

Rainfall, slopewash (the erosion of soil particles), surface runoff, and fine-litter transport were measured in tropical wet forest on a hillslope in the Luquillo Experimental Forest, Puerto Rico, from February 1998 until April 2000. Slopewash data were collected using Gerlach troughs at eight plots, each 2 square meters in area. Earthworms were excluded by electroshocking from four randomly selected plots. The other four (control) plots were undisturbed. During the experiment, earthworm population in the electroshocked plots was reduced by 91 percent. At the end of the experiment, the electroshocked plots had 13 percent of earthworms by count and 6 percent by biomass as compared with the control plots. Rainfall during the sampling period (793 days) was 9,143 millimeters. Mean and maximum rainfall by sampling period (mean of 16 days) were 189 and 563 millimeters, respectively. Surface runoff averaged 0.6 millimeters and 1.2 millimeters by sampling period for the control and experimental plots, equal to 0.25 and 0.48 percent of mean rainfall, respectively. Disturbance of the soil environment by removal of earthworms doubled runoff and increased the transport (erosion) of soil and organic material by a factor of 4.4. When earthworms were removed, the erosion of mineral soil (soil mass left after ashing) and the transport of fine litter were increased by a factor of 5.3 and 3.4, respectively. It is assumed that increased runoff is a function of reduced soil porosity, resulting from decreased burrowing and reworking of the soil in the absence of earthworms. The background, or undisturbed, downslope transport of soil, as determined from the control plots, was 51 kilograms per hectare and the "disturbance" rate, determined from the experimental plots, was 261 kilograms per hectare. The background rate for downslope transport of fine litter was 71 kilograms per hectare and the disturbance rate was 246 kilograms per hectare. Data from this study indicate that the reduction in soil macrofauna population, in this case, earthworms, plays a key role in increasing runoff and soil erosion and, therefore, has important implications for forest and water management.

Luquillo Experimental Forest↗

Natives bite back: Depredation and mortality of invasive juvenile Burmese pythons (Python bivittatus) in the Greater Everglades Ecosystem

Burmese pythons (Python bivittatus Kuhl, 1820) are one of the world’s largest snake species, making them a highly successful and biologically damaging invasive predator in the Greater Everglades Ecosystem, Florida, USA. Though we have knowledge of python diet within this system, we understand very little of other interactions with native species. Effects native species have on invasive pythons, especially in the juvenile size class, are of particular interest as the prevalence of mortalities would inform potential population growth and trophic dynamics with native prey species. Native ophiophagous predators in Florida feed on smaller native snake species and it is unknown if they consistently recognize similarly sized juvenile invasive pythons as prey items. Using radiotelemetry, we found at least four native species within Big Cypress National Preserve that were implicated in juvenile python deaths, including three Florida cottonmouths (Agkistrodon conanti Gloyd, 1969), five American alligators (Alligator mississippiensis Daudin, 1802), one hispid cotton rat (Sigmodon hispidus Say and Ord, 1825), and three mesomammals. One mortality was the result of an attempt to subdue a prey item 106% the size of the python, constituting the largest predator:prey size ratio ever reported in this size class. This finding may indicate that phenotypic variation in individual juvenile pythons includes behavior that could be maladaptive within the novel Florida environment. Here we describe some of the first confirmed cases of non-anthropogenic mortality in juvenile Burmese pythons in Florida and present evidence that invasive pythons in this size class are now being incorporated into the diets of native species in its invasive range Burmese pythons (Python bivittatus Kuhl, 1820) are one of the world’s largest snake species, making them a highly successful and biologically damaging invasive predator in the Greater Everglades Ecosystem, Florida, USA. Though we have knowledge of python diet within this system, we understand very little of other interactions with native species. Effects native species have on invasive pythons, especially in the juvenile size class, are of particular interest as the prevalence of mortalities would inform potential population growth and trophic dynamics with native prey species. Native ophiophagous predators in Florida feed on smaller native snake species and it is unknown if they consistently recognize similarly sized juvenile invasive pythons as prey items. Using radiotelemetry, we found at least four native species within Big Cypress National Preserve that were implicated in juvenile python deaths, including three Florida cottonmouths (Agkistrodon conanti Gloyd, 1969), five American alligators (Alligator mississippiensis Daudin, 1802), one hispid cotton rat (Sigmodon hispidus Say and Ord, 1825), and three mesomammals. One mortality was the result of an attempt to subdue a prey item 106% the size of the python, constituting the largest predator:prey size ratio ever reported in this size class. This finding may indicate that phenotypic variation in individual juvenile pythons includes behavior that could be maladaptive within the novel Florida environment. Here we describe some of the first confirmed cases of non-anthropogenic mortality in juvenile Burmese pythons in Florida and present evidence that invasive pythons in this size class are now being incorporated into the diets of native species in its invasive range.

Florida↗

Distance models as a tool for modelling detection probability and density of native bumblebees

Effective monitoring of native bee populations requires accurate estimates of population size and relative abundance among habitats. Current bee survey methods, such as netting or pan trapping, may be adequate for a variety of study objectives but are limited by a failure to account for imperfect detection. Biases due to imperfect detection could result in inaccurate abundance estimates or erroneous insights about the response of bees to different environments. To gauge the potential biases of currently employed survey methods, we compared abundance estimates of bumblebees ( Bombus spp.) derived from hierarchical distance sampling models (HDS) to bumblebee counts collected from fixed‐area net surveys (“net counts”) and fixed‐width transect counts (“transect counts”) at 47 early‐successional forest patches in Pennsylvania. Our HDS models indicated that detection probabilities of Bombus spp. were imperfect and varied with survey‐ and site‐covariates. Despite being conspicuous, Bombus spp. were not reliably detected beyond 5 m. Habitat associations of Bombus spp. density were similar across methods, but the strength of association with shrub cover differed between HDS and net counts. Additionally, net counts suggested sites with more grass hosted higher Bombus spp. densities whereas HDS suggested that grass cover was associated with higher detection probability but not Bombus spp. density. Density estimates generated from net counts and transect counts were 80%–89% lower than estimates generated from distance sampling. Our findings suggest that distance modelling provides a reliable method to assess Bombus spp. density and habitat associations, while accounting for imperfect detection caused by distance from observer, vegetation structure, and survey covariates. However, detection/non‐detection data collected via point‐counts, line‐transects and distance sampling for Bombus spp. are unlikely to yield species‐specific density estimates unless individuals can be identified by sight, without capture. Our results will be useful for informing the design of monitoring programs for Bombus spp. and other pollinators.

Pennsylvania↗

Trace element chemistry of zircons from oceanic crust: A method for distinguishing detrital zircon provenance

We present newly acquired trace element compositions for more than 300 zircon grains in 36 gabbros formed at the slow-spreading Mid-Atlantic and Southwest Indian Ridges. Rare earth element patterns for zircon from modern oceanic crust completely overlap with those for zircon crystallized in continental granitoids. However, plots of U versus Yb and U/Yb versus Hf or Y discriminate zircons crystallized in oceanic crust from continental zircon, and provide a relatively robust method for distinguishing zircons from these environments. Approximately 80% of the modern ocean crust zircons are distinct from the field defined by more than 1700 continental zircons from Archean and Phanerozoic samples. These discrimination diagrams provide a new tool for fingerprinting ocean crust zircons derived from reservoirs like that of modern mid-ocean ridge basalt (MORB) in both modern and ancient detrital zircon populations. Hadean detrital zircons previously reported from the Acasta Gneiss, Canada, and the Narryer Gneiss terrane, Western Australia, plot in the continental granitoid field, supporting hypotheses that at least some Hadean detrital zircons crystallized in continental crust forming magmas and not from a reservoir like modern MORB. ?? 2007 The Geological Society of America.

Geology↗

White phosphorus at Eagle River Flats, Alaska: A case history of waterfowl mortality

White phosphorus has a limited distribution in the environment because it only occurs where it has been directly used by humans. It is not transported aerially for any distance and, due to its density, has a limited ability to disperse through water. Therefore, it is not a contaminant of broad-scale concern. However, where it does occur, it can cause substantial mortality or critically injure populations of waterfowl. This chronic harm includes impaired liver and kidney functioning, decreased respiratory efficiency, increased susceptibility to predation, loss of body mass, general weakening and malaise, and curtailment of reproductive functioning. Lethal effects occur around 3---4 mg/kg or approximately 3-6 ingested particles; sublethal effects can occur with ingestion of as little as a single particle. The impact of P4 on waterfowl populations nesting around ERF has never been estimated. Even if direct mortality on ERF could be estimated accurately in ducks, the delayed toxicity of P4 in swans (and presumably other species that use small grit size) and the potential for swans to fly away after ingesting a lethal dose of P4 could greatly underestimate the overall mortality. Inhibition of laying, reduced fertility and hatchability, and teratogenesis in hens ingesting even a small amount of P4 could potentially have, an effect on populations greater than that exhibited by direct mortality. Predators such as bald eagles and gulls are also at risk due to the toxicity of pelletized, dissolved, and assimilated P4 in prey organisms. Although the U.S. Army stopped using P4 in wetlands in 1993 and remediation efforts have been underway since 1995, waterfowl mortality is expected to continue for several more years. Because Eagle River Flats is only one of several sites where P4 has been found in wetland conditions, further biological investigation is warranted at these other sites.

Book chapter↗

Influences of introduced plague on North American mammals: Implications from ecology of plague in Asia

Intercontinental movements of invasive species continue to modify the world's ecosystems. The plague bacterium ( Yersinia pestis ) has colonized and altered animal communities worldwide but has received much more attention as a human pathogen. We reviewed studies on the ecology of Y. pestis in ancient foci of central Asia and in western North America, where the bacterium apparently has become established much more recently. Although rodent populations on both continents are affected dramatically by epizootics of plague, the epidemiologically important species of Asia demonstrate resistance in portions of their populations, whereas those of North America are highly susceptible. Individual variation in resistance, which is widespread in Asian rodents and allows a microevolutionary response, has been documented in few North American species of rodents. Plague increases costs of sociality and coloniality in susceptible hosts, increases benefits of disease resistance in general, and increases benefits of adaptability to variable environments for species at higher trophic levels. Prairie dogs ( Cynomys ) epitomize taxa with high risk to plague because prairie dogs have uniformly low resistance to plague and are highly social. Relationships to plague are poorly understood for many North American rodents, but more than one-half of the species of conservation concern occur within the geographic range of plague.

Journal of Mammalogy↗

Annual and seasonal distribution of intertidal foraminifera and stable carbon isotope geochemistry, Bandon Marsh, Oregon, USA

We investigated the influence of inter-annual and seasonal differences on the distribution of live and dead foraminifera, and the inter-annual variability of stable carbon isotopes (d13C), total organic carbon (TOC) values and carbon to nitrogen (C/N) ratios in bulk sediments from intertidal environments of Bandon Marsh (Oregon, USA). Living and dead foraminiferal species from 10 stations were analyzed over two successive years in the summer (dry) and fall (wet) seasons. There were insignificant inter-annual and seasonal variations in the distribution of live and dead species. But there was a noticeable decrease in calcareous assemblages (Haynesina sp.) between live populations and dead assemblages, indicating that most of the calcareous tests were dissolved after burial; the agglutinated assemblages were comparable between constituents. The live populations and dead assemblages were dominated by Miliammina fusca in the tidal flat and low marsh, Jadammina macrescens, Trochammina inflata and M. fusca in the high marsh, and Trochamminita irregularis and Balticammina pseudomacrescens in the highest marsh to upland. Geochemical analyses (d13C, TOC and C/N of bulk sedimentary organic matter) show no significant influence of inter-annual variations but a significant correlation of d13C values (R = 20.820, p , 0.001), TOC values (R = 0.849, p , 0.001) and C/N ratios (R = 0.885, p , 0.001) to elevation with respect to the tidal frame. Our results suggest that foraminiferal assemblages and d13C and TOC values, as well as C/N ratios, in Bandon Marsh are useful in reconstructing paleosea-levels on the North American Pacific coast.

Oregon↗

Collision and displacement vulnerability among marine birds of the California Current System associated with offshore wind energy infrastructure

With growing climate change concerns and energy constraints, there is an increasing need for renewable energy sources within the United States and globally. Looking forward, offshore wind-energy infrastructure (OWEI) has the potential to produce a significant proportion of the power needed to reach our Nation’s renewable energy goal. Offshore wind-energy sites can capitalize open areas within Federal waters that have persistent, high winds with large energy production potential. Although there are few locations in the California Current System (CCS) where it would be acceptable to build pile-mounted wind turbines in waters less than 50 m deep, the development of technology able to support deep-water OWEI (>200 m depth) could enable wind-energy production in the CCS. As with all human-use of the marine environment, understanding the potential impacts of wind-energy infrastructure on the marine ecosystem is an integral part of offshore wind-energy research and planning. Herein, we present a comprehensive database to quantify marine bird vulnerability to potential OWEI in the CCS (see https://doi.org/10.5066/F79C6VJ0 ). These data were used to quantify marine bird vulnerabilities at the population level. For 81 marine bird species present in the CCS, we created three vulnerability indices: Population Vulnerability, Collision Vulnerability, and Displacement Vulnerability. Population Vulnerability was used as a scaling factor to generate two comprehensive indicies: Population Collision Vulnerability (PCV) and Population Displacement Vulnerability (PDV). Within the CCS, pelicans, terns (Forster’s [ Sterna forsteri ], Caspian [ Hydroprogne caspia ], Elegant [ Thalasseus elegans ], and Least Tern [ Sternula antillarum ]), gulls (Western [ Larus occidentalis ] and Bonaparte’s Gull [ Chroicocephalus philadelphia ]), South Polar Skua ( Stercorarius maccormicki ), and Brandt’s Cormorant ( Phalacrocorax penicillatus ) had the greatest PCV scores. Brown Pelican ( Pelicanus occidentalis ) had the greatest overall PCV score. Some alcids (Scripps’s Murrelet [ Synthliboramphus scrippsi ], Marbled Murrelet [ Brachyramphus marmoratus ], and Tufted Puffin [ Fratercula cirrhata ]), terns (Elegant and Least Lern), and loons (Yellow-billed [ Gavia adamsii ] and Common Loon [ G. immer ]) had the greatest PDV scores. Ashy Storm-Petrel ( Oceanodroma homochroa ) had the greatest overall PDV score. To help inform decisions that will impact seabird conservation, vulnerability assessment results can now be combined with recent marine bird at-sea distribution and abundance data for the CCS to evaluate vulnerability areas where OWEI development is being considered. Lastly, it is important to note that as new information about seabird behavior and populations in the CCS becomes available, this database can be easily updated and modified.

Open-File Report↗

Seamount mineral deposits: A source of rare metals for high technology industries

The near exponential growth in Earth’s population and the global economy puts increasing constraints on our planet’s finite supply of natural metal resources, and, consequently, there is an increasing need for new sources to supply high-tech industries. To date, effectively all of our raw-metal resources are produced at land-based sites. Except for nearshore placer deposits, the marine environment has been largely excluded from metal mining due to technological difficulties, even though it covers more than 70% of the planet. The case can be made that deep-water seabed mining is inevitable in the future, owing to the critical and strategic metal needs for human society. In this paper, we evaluate the case that seamounts offer significant potential for mining.

Oceanography↗

Rare long-distance dispersal of the Island Night Lizard, Xantusia riversiana, maintains high diversity in a fragmented environment

The Island Night Lizard ( Xantusia riversiana ) is endemic to three of the Channel Islands off the coast of California, USA. Introduced species such as goats, sheep, and cats have profoundly affected the fauna and flora of the islands for over 150 years, but most of these non-native species have been recently removed. We measured the distribution of genetic diversity in Island Night Lizards across San Nicolas Island using DNA microsatellites to assess the impacts of historical habitat change on effective population size, gene flow, and population divergence; to provide baseline data for future monitoring of genetic diversity; and to provide recommendations to inform the restoration of degraded habitat. Despite a history of profound anthropogenic habitat disturbance, genetic diversity was high within sites, and there was no evidence of population bottlenecks. Divergence between sites was extraordinarily high, as expected for this sedentary species. Landscape resistance modeling using circuit theory showed that unsuitable habitat is relatively permeable to gene flow compared to suitable habitat, and yet populations separated by very short geographic distances remain genetically distinct. We found no evidence of a need for short-term intervention such as artificial translocations to maintain genetic diversity. Instead, we suggest that management should focus on maintaining, improving, and increasing habitat, especially in creating patches of habitat to link existing sites.

California↗

Trace elements in moose (Alces alces) found dead in Northwestern Minnesota, USA

The moose ( Alces alces ) population in bog and forest areas of Northwestern Minnesota has declined for more than 25 years, and more recently the decline is throughout Northwestern Minnesota. Both deficiencies and elevations in trace elements have been linked to the health of moose worldwide. The objective of this study was to evaluate whether trace element toxicity or deficiency may have contributed to the decline of moose in Northwestern Minnesota. Livers of 81 moose found dead in Northwestern Minnesota in 1998 and 1999 were analyzed for trace elements. With the exception of selenium (Se) and copper (Cu), trace elements were not at toxic or deficient levels based on criteria set for cattle. Selenium concentrations in moose livers based on criteria set for cattle were deficient in 3.7% of livers and at a chronic toxicity level in 16% of livers. Copper concentrations based on criteria set for cattle were deficient in 39.5% of livers, marginally deficient in 29.5% of livers and adequate in 31% of livers. Moose from agricultural areas had higher concentrations, on average, of Cd, Cu, Mo and Se in their livers than moose from bog and forest areas. Older moose had higher concentrations of Cd and Zn, and lower concentrations of Cu than younger moose. Copper deficiency, which has been associated with population declines of moose in Alaska and Sweden, may be a factor contributing to the decline of moose in Northwestern Minnesota. (C) 2004 Elsevier B.V. All rights reserved.

Minnesota↗

Temporal evaluation of estrogenic endocrine disruption markers in smallmouth bass (Micropterus dolomieu) reveals seasonal variability in intersex

A reconnaissance project completed in 2009 identified intersex and elevated plasma vitellogenin in male smallmouth bass inhabiting the Missisquoi River, VT. In an attempt to identify the presence and seasonality of putative endocrine disrupting chemicals or other factors associated with these observations, a comprehensive reevaluation was conducted between September 2012 and June 2014. Here, we collected smallmouth bass from three physically partitioned reaches along the river to measure biomarkers of estrogenic endocrine disruption in smallmouth bass. In addition, polar organic chemical integrative samples (POCIS) were deployed to identify specific chemicals associated with biological observations. We did not observe biological differences across reaches indicating the absence of clear point source contributions to the observation of intersex. Interestingly, intersex prevalence and severity decreased in a stepwise manner over the timespan of the project. Intersex decreased from 92.8% to 28.1%. The only significant predictor of intersex prevalence was year of capture, based on logistic regression analysis. The mixed model of fish length and year-of-capture best predicted intersex severity. Intersex severity was also significantly different across late summer and early spring collections indicating seasonal changes in this metric. Plasma vitellogenin and liver vitellogenin Aa transcript abundance in males did not indicate exposure to estrogenic endocrine disrupting chemicals at any of the four sample collections. Analysis of chemicals captured by the POCIS as well as results of screening discrete water samples or POCIS extracts did not indicate the contribution of appreciable estrogenic chemicals. It is possible that unreported changes in land-use activity have ameliorated the problem, and our observations indicate recovery. Regardless, this work clearly emphasizes that single, snap shot sampling for intersex may not yield representative data given that the manifestation of this condition within a population can change dramatically over time.

Vermont↗

An evaluation of biomarkers of reproductive function and potential contaminant effects in Florida largemouth bass (Micropterus salmoides floridanus) sampled from the St. Johns River

The objective of this study was to describe and compare several reproductive parameters for Florida largemouth bass ( Micropterus salmoides floridanus ) inhabiting the St. Johns River and exposed to different types and/or degrees of contamination. Welaka was selected as the reference site in this study because of its low urban and agricultural development, Palatka is in close proximity to a paper mill plant, the Green Cove site is influenced by marine shipping activities and Julington Creek site receives discharges of domestic wastewater and storm water runoff from recreational boating marinas. For this study, bass were sampled both prior to (September 1996) and during the spawning season (February 1997). In order to characterize chemical exposure, bass livers were analyzed for up to 90 trace organics and 11 trace metal contaminants. Reproductive parameters measured included gonadosomatic index (GSI), histological evaluation of gonads and plasma concentrations of vitellogenin (VTG), 17β-estradiol (E 2 ) and 11-ketotestosterone (11-KT). In general, the sum of organic chemicals was highest in livers from Palatka bass and bass from Green Cove and Julington Creek had higher hepatic concentrations of low molecular polycyclic aromatic hydrocarbons and polychlorinated biphenyls when compared to fish from Welaka. Metals were more variable across sites, with highest mean concentrations found in bass from either Julington Creek (Ag, As, Cr, Cu, Zn) or Welaka (Cd, Hg, Pb, Se, Tn). Female bass from Palatka and Green Cove had lower concentrations of E 2 , VTG and lower GSI in relation to Welaka. Males from Palatka and Green Cove showed comparable declines in 11-KT in relation to males from Julington Creek and GSI were decreased only in Palatka males. These results indicate a geographical trend in reproductive effects, with changes being most pronounced at the site closest to the paper mill (Palatka) and decreasing as the St. Johns River flows downstream. Since reproductive alterations were most evident in bass sampled from the site closest to the paper mill discharge, it is possible that exposure to these effluents might explain at least some of the results reported here. However, the presence of reproductive alterations in fish sampled at a considerable distance from the mill discharge (Green Cove, 40 km) would suggest exposure to chemicals released from sources other than the paper mill plant. It is clear that additional studies are needed to evaluate the potential impact of these reproductive changes in populations of Florida largemouth bass inhabiting the St. Johns River.

Florida↗

Evaluating the potential for sea lice to evolve freshwater tolerance as a consequence of freshwater treatments in salmon aquaculture

Increasing usage of non-medicinal methods (NMMs) to control sea louse infestations on salmon farms has raised questions about whether sea lice may be able to evolve tolerance of NMMs. Of particular concern is the potential for sea lice to evolve freshwater tolerance as a result of freshwater treatments. Wild trout and some juvenile salmonids swim into freshwater to control infestations and regain ionic balance after disruption by sea lice; freshwater tolerance would compromise this potentially adaptive behavior. Here we evaluated the potential for freshwater tolerance to evolve in the sea louse Lepeophtheirus salmonis. When exposed to low-salinity water, parasitic stages of sea lice are able to osmoregulate through the host, while larval planktonic stages are not. Transcriptomic work suggests that sea lice mount a costly polygenic stress response when exposed to brackish water. The population structure of sea lice is panmictic in both the Pacific and Atlantic, making it conducive to rapid evolutionary responses. It is unknown how much heritable genetic variation these panmictic populations have for freshwater treatments. While usage of freshwater treatments on wellboats is increasing, it is unclear whether the freshwater itself is a strong selective force; during the freshwater exposure, sea lice can die from physical disruption during pumping and filtration on the wellboat. Future studies are advised to quantify the heritable variation in freshwater tolerance in sea louse populations, characterize mechanisms for freshwater tolerance in planktonic and attached sea lice, and assess the risk of freshwater tolerance evolution under different management strategies.

Aquaculture Environment Interactions↗

An evaluation of liquid ammonia (ammonium hydroxide) as a candidate piscicide

Eradication of populations of nonnative aquatic species for the purpose of reintroducing native fish is often difficult because very few effective tools are available for removing aquatic organisms. This creates the need to evaluate new chemicals that could be used as management tools for native fish conservation. Ammonia is a natural product of fish metabolism and is naturally present in the environment at low levels, yet is known to be toxic to most aquatic species. Our objective was to determine the feasibility of using liquid ammonia as a fisheries management tool by evaluating its effectiveness at killing undesirable aquatic species and its persistence in a pond environment. A suite of invasive aquatic species commonly found in the southwestern USA were introduced into two experimental outdoor ponds located at the Rocky Mountain Research Station in Flagstaff, Arizona. Each pond was treated with ammonium hydroxide (29%) at 38 ppm. This target concentration was chosen because previous studies using anhydrous ammonia reported incomplete fish kills in ponds at concentrations less than 30 ppm. Water quality was monitored for 49 d to determine how quickly the natural bacteria in the environment converted the ammonia to nitrate. Ammonia levels remained above 8 ppm for 24 and 18 d, respectively, in ponds 1 and 2. Nitrite levels in each pond began to rise approximately 14 d after dosing with ammonia and stayed above 5 ppm for an additional 21 d in pond 1 and 18 d in pond 2. After 49 d all water in both ponds was drained and no fish, crayfish, or tadpoles were found to have survived the treatment, but aquatic turtles remained alive and appeared unaffected. Liquid ammonia appears to be an effective tool for removing many problematic invasive aquatic species and may warrant further investigation as a piscicide.

North American Journal of Fisheries Management↗

Running on empty: Recharge dynamics from animal movement data

Vital rates such as survival and recruitment have always been important in the study of population and community ecology. At the individual level, physiological processes such as energetics are critical in understanding biomechanics and movement ecology and also scale up to influence food webs and trophic cascades. Although vital rates and population-level characteristics are tied with individual-level animal movement, most statistical models for telemetry data are not equipped to provide inference about these relationships because they lack the explicit, mechanistic connection to physiological dynamics. We present a framework for modelling telemetry data that explicitly includes an aggregated physiological process associated with decision making and movement in heterogeneous environments. Our framework accommodates a wide range of movement and physiological process specifications. We illustrate a specific model formulation in continuous-time to provide direct inference about gains and losses associated with physiological processes based on movement. Our approach can also be extended to accommodate auxiliary data when available. We demonstrate our model to infer mountain lion ( Puma concolor ; in Colorado, USA) and African buffalo ( Syncerus caffer ; in Kruger National Park, South Africa) recharge dynamics.

Ecology Letters↗