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At least 991 records · Page 55Linked to original sources
USGS2000

A Synopsis of Technical Issues of Concern for Monitoring Trace Elements in Highway and Urban Runoff

Trace elements, which are regulated for aquatic life protection, are a primary concern in highway- and urban-runoff studies because stormwater runoff may transport these constituents from the land surface to receiving waters. Many of these trace elements are essential for biological activity and become detrimental only when geologic or anthropogenic sources exceed concentrations beyond ranges typical of the natural environment. The Federal Highway Administration and State Transportation Agencies are concerned about the potential effects of highway runoff on the watershed scale and for the management and protection of watersheds. Transportation agencies need information that is documented as valid, current, and scientifically defensible to support planning and management decisions. There are many technical issues of concern for monitoring trace elements; therefore, trace-element data commonly are considered suspect, and the responsibility to provide data-quality information to support the validity of reported results rests with the data-collection agency. Paved surfaces are fundamentally different physically, hydraulically, and chemically from the natural surfaces typical of most freshwater systems that have been the focus of many traceelement- monitoring studies. Existing scientific conceptions of the behavior of trace elements in the environment are based largely upon research on natural systems, rather than on systems typical of pavement runoff. Additionally, the logistics of stormwater sampling are difficult because of the great uncertainty in the occurrence and magnitude of storm events. Therefore, trace-element monitoring programs may be enhanced if monitoring and sampling programs are automated. Automation would standardize the process and provide a continuous record of the variations in flow and water-quality characteristics. Great care is required to collect and process samples in a manner that will minimize potential contamination or attenuation of trace elements and other sources of bias and variability in the sampling process. Trace elements have both natural and anthropogenic sources that may affect the sampling process, including the sample-collection and handling materials used in many trace-element monitoring studies. Trace elements also react with these materials within the timescales typical for collection, processing and analysis of runoff samples. To study the characteristics and potential effects of trace elements in highway and urban runoff, investigators typically sample one or more operationally defined matrixes including: whole water, dissolved (filtered water), suspended sediment, bottom sediment, biological tissue, and contaminant sources. The sampling and analysis of each of these sample matrixes can provide specific information about the occurrence and distribution of trace elements in runoff and receiving waters. There are, however, technical concerns specific to each matrix that must be understood and addressed through use of proper collection and processing protocols. Valid protocols are designed to minimize inherent problems and to maximize the accuracy, precision, comparability, and representativeness of data collected. Documentation, including information about monitoring protocols, quality assurance and quality control efforts, and ancillary data also is necessary to establish data quality. This documentation is especially important for evaluation of historical traceelement monitoring data, because trace-element monitoring protocols and analysis methods have been constantly changing over the past 30 years.

Open-File Report↗
USGS2011

The effect of offering distance education on enrollment in onsite training at the National Conservation Training Center

The objective of this study was to explore the effect that providing distance education courses would have on enrollment in courses offered on the campus of the National Conservation Training Center. This is an exploratory study and the results should be interpreted as preliminary rather than conclusive. The study included two components: analysis of existing training-enrollment data for the time period from October 1, 2007 to June 24, 2009, and a survey of U.S. Fish and Wildlife Service (Service) employees regarding their preferences for onsite training and distance education. The analysis of training-enrollment data included training records for 2,823 Service employees. Using this dataset, we created a database that included region, supervisory status, number of enrollments in online training, instructor-led web-based classes, correspondence courses, courses at the campus of the National Conservation Training Center, and instructor-led courses off campus. Our analyses focused on differences between enrollment in distance education and onsite courses and the effects of regional affiliation, supervisory status, and course format. Generally, the regions closest to the campus had higher enrollment in onsite training and regions farther away had higher enrollment in distance education. Nonsupervisors were more likely to enroll in training on campus and supervisors were more likely to enroll in instructor-led training off site. Enrollment in instructor-led courses was higher than in self-paced courses, although this may result from fewer offerings of self-paced courses. The second component of the study involved a survey of Service employees regarding their preferences for distance education and onsite training. The survey was administered online and 911 Service employees responded. Overall, survey respondents indicated a small preference for onsite training and were more likely to enroll in onsite courses than distance education. When asked to indicate reasons that would lead them to choose one type of training over the other, practical reasons were more frequently indicated as influential in the decision to enroll in distance education and interactions with others were more frequently cited as reasons to enroll in onsite training.We conclude that the information we assembled and analyzed indicates that distance education currently functions as a supplemental approach to training when participation in training onsite at the National Conservation Training Center campus is impractical.

Open-File Report↗
USGS2022

Guidelines for volcano-observatory operations during crises: Recommendations from the 2019 Volcano Observatory Best Practices meeting

In November 2019, the fourth meeting on Volcano Observatory Best Practices workshop was held in Mexico City as a series of talks, discussions, and panels. Volcanologists from around the world offered suggestions for ways to optimize volcano-observatory crisis operations. By crisis, we mean unrest that may or may not lead to eruption, the eruption itself, or its aftermath, all of which require analysis and communications by the observatory. During a crisis, the priority of the observatory should be to acquire, process, analyze, and interpret data in a timely manner. A primary goal is to communicate effectively with the authorities in charge of civil protection. Crisis operations should rely upon exhaustive planning in the years prior to any actual unrest or eruptions. Ideally, nearly everything that observatories do during a crisis should be envisioned, prepared, and practiced prior to the actual event. Pre-existing agreements and exercises with academic and government collaborators will minimize confusion about roles and responsibilities. In the situation where planning is unfinished, observatories should prioritize close ties and communications with the land and civil-defense authorities near the most threatening volcanoes. To a large extent, volcanic crises become social crises, and any volcano observatory should have a communication strategy, a lead communicator, regular status updates, and a network of colleagues outside the observatory who can provide similar messaging to a public that desires consistent and authoritative information. Checklists permit tired observatory staff to fulfill their duties without forgetting key communications, data streams, or protocols that need regular fulfilment (Bretton et al. 2018; Newhall et al. 2020). Observatory leaders need to manage staff workload to prevent exhaustion and ensure that expertise is available as needed. Event trees and regular group discussions encourage multi-disciplinary thinking, consideration of disparate viewpoints, and documentation of all group decisions and consensus. Though regulations, roles and responsibilities differ around the world, scientists can justify their actions in the wake of an eruption if they document their work, are thoughtful and conscientious in their deliberations, and carry out protocols and procedures developed prior to volcanic unrest. This paper also contains six case studies of volcanic eruptions or observatory actions that illustrate some of the topics discussed herein. Specifically, we discuss Ambae (Vanuatu) in 2017–2018, Kīlauea (USA) in 2018, Etna (Italy) in 2018, Bárðarbunga (Iceland) in 2014, Cotopaxi (Ecuador) in 2015, and global data sharing to prepare for eruptions at Nyiragongo (Democratic Republic of Congo).

Hawaii↗
USGS1998

Low-flow water-quality characterization of the Gore Creek watershed, upper Colorado River basin, Colorado, August 1996

The Upper Colorado River Basin (UCOL) is one of 59 National Water-Quality Assessment (NAWQA) study units designed to assess the status and trends of the Nation?s water quality (Leahy and others, 1990). The UCOL study unit began operation in 1994, and surface-water-quality data collection at a network of 14 sites began in October 1995 (Apodaca and others, 1996; Spahr and others, 1996). Gore Creek, which flows through Vail, Colorado, originates in pristine alpine headwaters and is designated a gold-medal trout fishery. The creek drains an area of about 102 square miles and is a tributary to the Eagle River. Gore Creek at the mouth near Minturn (site 13 in fig. 1) is one of the 14 sites in the UCOL network. This site was selected to evaluate water quality resulting from urban development and recreational land use. The Gore Creek watershed has undergone rapid land-use changes since the 1960?s as the Vail area shifted from traditional mountain ranchlands to a four-season resort community. Residential, recreational, commercial, and transportation development continues near Gore Creek and its tributaries to support the increasing permanent and tourist population of the area. Interstate 70 runs through the watershed from Vail Pass near site 14, along the eastern side of Black Gore Creek, and along the northern side of the main stem of Gore Creek to the mouth of the watershed (fig. 1). A major local concern is how increasing urbanization/recreation affects the water quality, gold-medal trout fishery, and aesthetic values of Gore Creek. An evaluation of the spatial characteristics of water quality in the watershed upstream from site 13 at the mouth of Gore Creek (fig. 1) can provide local water and land managers with information necessary to establish water policy and make land-use planning decisions to maintain or improve water quality. Historical data collected at the mouth of Gore Creek provide information about water quality resulting from land use, but a synoptic sampling is needed to determine the distribution and sources of water-quality constituents at one point in time. In August 1996, a low-flow synoptic sampling for analyses of water-quality properties and constituents at sites in the Gore Creek watershed was done by the U.S. Geological Survey, in cooperation with the Town of Vail, Eagle River Water and Sanitation District, Upper Eagle River Water Authority, and Northwest Colorado Council of Governments, to evaluate the water quality of Gore Creek. The August low-flow period can be important from water-quality and stream ecology perspectives. There is less water available to dilute any contaminants entering the streams, and stream temperatures are highest during August. Physical habitat for aquatic plants and animals is smaller than during most other times of the year. To address these more extreme water-quality and ecological conditions, the synoptic sampling was conducted during the summer low-flow period. Specific objectives of this sampling included: 1. Establish a current data set representing the spatial characteristics of low-flow water-quality conditions in the Gore Creek watershed, and 2. Develop some understanding of land-use and water-quality relations in the watershed. This fact sheet presents hydrologic background information and an analysis of general water-quality properties and constituents, trace elements, and nutrients collected in water samples during low-flow synoptic sampling of the Gore Creek watershed. The U.S. Geological Survey also is conducting a study of the algae and macroinvertebrate communities and physical habitat of streams in the Gore Creek watershed during low flow. This study is designed to provide information about land-use and stream ecology relations in the watershed.

Colorado↗
USGS2022

Age-specific survival rates, causes of death, and allowable take of golden eagles in the western United States

In the United States, the Bald and Golden Eagle Protection Act prohibits take of golden eagles ( Aquila chrysaetos ) unless authorized by permit, and stipulates that all permitted take must be sustainable. Golden eagles are unintentionally killed in conjunction with many lawful activities (e.g., electrocution on power poles, collision with wind turbines). Managers who issue permits for incidental take of golden eagles must determine allowable take levels and manage permitted take accordingly. To aid managers in making these decisions in the western United States, we used an integrated population model to obtain estimates of golden eagle vital rates and population size, and then used those estimates in a prescribed take level (PTL) model to estimate the allowable take level. Estimated mean annual survival rates for golden eagles ranged from 0.70 (95% credible interval = 0.66–0.74) for first-year birds to 0.90 (0.88–0.91) for adults. Models suggested a high proportion of adult female golden eagles attempted to breed and breeding pairs fledged a mean of 0.53 (0.39–0.72) young annually. Population size in the coterminous western United States has averaged ~31,800 individuals for several decades, with λ = 1.0 (0.96–1.05). The PTL model estimated a median allowable take limit of ~2227 (708–4182) individuals annually given a management objective of maintaining a stable population. We estimate that take averaged 2572 out of 4373 (59%) deaths annually, based on a representative sample of transmitter-tagged golden eagles. For the subset of golden eagles that were recovered and a cause of death determined, anthropogenic mortality accounted for an average of 74% of deaths after their first year; leading forms of take over all age classes were shooting (~670 per year), collisions (~611), electrocutions (~506), and poisoning (~427). Although observed take overlapped the credible interval of our allowable take estimate and the population overall has been stable, our findings indicate that additional take, unless mitigated for, may not be sustainable. Our analysis demonstrates the utility of the joint application of integrated population and prescribed take level models to management of incidental take of a protected species.

western United States↗
USGS2022

Using Landsat and MODIS satellite collections to examine extent, timing, and potential impacts of surface water inundation in California croplands☆

The state of California, United States of America produces many crop products that are both utilized domestically and exported throughout the world. With nearly 39,000 km 2 of croplands, monitoring unintentional and intentional surface water inundation is important for water resource management and flood hazard readiness. We examine inundation dynamics in California croplands from 2003 to 2020 by intersecting monthly surface water maps (n = 216 months) derived using two satellite remote sensing platforms (Landsat and Moderate Resolution Imaging Spectroradiometer [MODIS]) with a high-quality cropland map generated by the California Department of Water Resources. Surface water maps were produced using the Dynamic Surface Water Extent model, in which satellite image pixels are classified into different levels of detection confidence. Our analysis focused on calculating monthly and annual occurrence of “high confidence” water for each satellite collection across eight cropland types and 58 counties. Results indicate that 49.9% (MODIS) to 56.4% (Landsat) of croplands were inundated at least once during the 18-year timespan. Rice crops, due to their unique need of consistent surface water and dominance as a crop type in CA, had the highest proportion of and mean annual inundation area, while citrus crops had the lowest. Mean monthly inundation patterns in most croplands followed California's precipitation patterns with high inundation during the winter and spring rainy season. At the county level, croplands in the southern Central Valley typically had high occurrences of inundation in conjunction with large crop areas. Exposure and sensitivity of inundation for three crop types (citrus, deciduous, and vineyards) that are typically less associated with intentional inundation were geographically variable, but overall were generally highest in counties in the southern Central Valley, California's primary agricultural region. Flood and precipitation related crop insurance claims indicated that rice had the highest mean indemnity payout for any month with damages typically occurring in March and April. Insurance claims were also high in deciduous fruit and nut crops, which had peak damages in February. A comparison between inundation results and insurance claims suggests that the inundation mapped by our process coincides with claim activity. These data elucidate water inundation patterns across the state that can serve to inform farmers, insurers, decision makers, resource managers, and flood mitigation professionals.

California↗
USGS2015

Incorporating induced seismicity in the 2014 United States National Seismic Hazard Model: results of the 2014 workshop and sensitivity studies

The U.S. Geological Survey National Seismic Hazard Model for the conterminous United States was updated in 2014 to account for new methods, input models, and data necessary for assessing the seismic ground shaking hazard from natural (tectonic) earthquakes. The U.S. Geological Survey National Seismic Hazard Model project uses probabilistic seismic hazard analysis to quantify the rate of exceedance for earthquake ground shaking (ground motion). For the 2014 National Seismic Hazard Model assessment, the seismic hazard from potentially induced earthquakes was intentionally not considered because we had not determined how to properly treat these earthquakes for the seismic hazard analysis. The phrases “potentially induced” and “induced” are used interchangeably in this report, however it is acknowledged that this classification is based on circumstantial evidence and scientific judgment. For the 2014 National Seismic Hazard Model update, the potentially induced earthquakes were removed from the NSHM’s earthquake catalog, and the documentation states that we would consider alternative models for including induced seismicity in a future version of the National Seismic Hazard Model. As part of the process of incorporating induced seismicity into the seismic hazard model, we evaluate the sensitivity of the seismic hazard from induced seismicity to five parts of the hazard model: (1) the earthquake catalog, (2) earthquake rates, (3) earthquake locations, (4) earthquake Mmax (maximum magnitude), and (5) earthquake ground motions. We describe alternative input models for each of the five parts that represent differences in scientific opinions on induced seismicity characteristics. In this report, however, we do not weight these input models to come up with a preferred final model. Instead, we present a sensitivity study showing uniform seismic hazard maps obtained by applying the alternative input models for induced seismicity. The final model will be released after further consideration of the reliability and scientific acceptability of each alternative input model. Forecasting the seismic hazard from induced earthquakes is fundamentally different from forecasting the seismic hazard for natural, tectonic earthquakes. This is because the spatio-temporal patterns of induced earthquakes are reliant on economic forces and public policy decisions regarding extraction and injection of fluids. As such, the rates of induced earthquakes are inherently variable and nonstationary. Therefore, we only make maps based on an annual rate of exceedance rather than the 50-year rates calculated for previous U.S. Geological Survey hazard maps.

Open-File Report↗
USGS2015

Evaluation and comparison of methods to estimate irrigation withdrawal for the National Water Census Focus Area Study of the Apalachicola-Chattahoochee-Flint River Basin in southwestern Georgia

Methods to estimate irrigation withdrawal using nationally available datasets and techniques that are transferable to other agricultural regions were evaluated by the U.S. Geological Survey as part of the Apalachicola-Chattahoochee-Flint (ACF) River Basin focus area study of the National Water Census (ACF–FAS). These methods investigated the spatial, temporal, and quantitative distributions of water withdrawal for irrigation in the southwestern Georgia region of the ACF–FAS, filling a vital need to inform science-based decisions regarding resource management and conservation. The crop– demand method assumed that only enough water is pumped onto a crop to satisfy the deficit between evapotranspiration and precipitation. A second method applied a geostatistical regimen of variography and conditional simulation to monthly metered irrigation withdrawal to estimate irrigation withdrawal where data do not exist. A third method analyzed Landsat satellite imagery using an automated approach to generate monthly estimates of irrigated lands. These methods were evaluated independently and compared collectively with measured water withdrawal information available in the Georgia part of the ACF–FAS, principally in the Chattahoochee-Flint River Basin. An assessment of each method’s contribution to the National Water Census program was also made to identify transfer value of the methods to the national program and other water census studies. None of the three methods evaluated represent a turnkey process to estimate irrigation withdrawal on any spatial (local or regional) or temporal (monthly or annual) extent. Each method requires additional information on agricultural practices during the growing season to complete the withdrawal estimation process. Spatial and temporal limitations inherent in identifying irrigated acres during the growing season, and in designing spatially and temporally representative monitor (meter) networks, can belie the ability of the methods to produce accurate irrigation-withdrawal estimates that can be used to produce dependable and consistent assessments of water availability and use for the National Water Census. Emerging satellite-data products and techniques for data analysis can generate high spatial-resolution estimates of irrigated-acres distributions with near-term temporal frequencies compatible with the needs of the ACF–FAS and the National Water Census.

Georgia↗
USGS2025

Spatial scale dependence of error in fractional component cover maps

Geospatial products such as fractional vegetation cover maps often report overall, pixel-wise accuracy, but decision-making with these products often occurs at coarser scales. As such, data users often desire guidance on the appropriate spatial scale to apply these data. We worked toward establishing this guidance by assessing RCMAP (Rangeland Condition Monitoring Assessment and Projection) accuracy relative to a series of high-resolution predictions of component cover. We scale the 2-m and RCMAP predictions to various focal window sizes scales ranging from 30 to 1 500 m using focal averaging. We also evaluated variation in scaling effects on error at ecoregion and pasture (mean area of 1 050 ha) scales. Our results demonstrate increased accuracy at broader windows, across all components, and most increases in accuracy level off at ∼200–600 m scales. At the scale with highest accuracy, cross-component average correlation ( r ) increased by 6.5%, and root mean square error (RMSE) was reduced 46.4% relative to 30-m scale data. Scaling-related improvements to accuracy were greatest in components such as shrub and tree with more spatially heterogeneous cover and in ecoregions with more spatially heterogenous cover. When components were aggregated at the pasture scale, r increased 10% and RMSE decreased 34.3% on average relative to the 30-m scale. Our results provide empirical data on the scale dependence of error, which fractional cover data users may consider alongside their needs when using these data. Although the general principle remains that remotely sensed products are intended to address landscape-scale questions, our analysis indicates that applying data at finer than landscape spatial scales and grouping even a handful of pixels resulted in lowered error compared to pixel-level comparisons. Our results quantify the trade-offs between data granularity and error related to scale for fractional vegetation cover.

western United States↗
USGS2023

Red Knot stopover population size and migration ecology at Delaware Bay, USA, 2023

Red Knots ( Calidris canutus rufa ) stop at Delaware Bay on the mid-Atlantic coast of North America during northward migration to feed on eggs of horseshoe crabs ( Limulus polyphemus ). We conducted a mark-recapture-resight investigation to estimate the passage population of Red Knots at Delaware Bay in 2023. We used a Bayesian analysis of a Jolly-Seber model, which accounts for turnover in the population and the probability of detection during surveys. The 2023 passage population size was estimated at 39,361 (95% credible interval: 33,724–47,556). Although there is broad overlap in the credible intervals for population estimates from 2020–2023, the population estimate for 2023 was below 40,000 birds for only the second time since 2011. Horseshoe crabs have been harvested for use as bait in eel ( Anguilla rostrata ) and whelk ( Busycon ) fisheries since at least 1990. In the late 1990s and early 2000s, the number of Red Knots counted during aerial surveys at Delaware Bay declined from ~50,000 to ~13,000 and some avian conservation biologists hypothesized that horseshoe crab harvest levels in the 1990s prevented sufficient refueling for successful migration to the Arctic breeding grounds, reproduction, and survival for the remainder of the annual cycle. Since 2013, the harvest of horseshoe crabs in the Delaware Bay region has been managed using an Adaptive Resource Management (ARM) framework. The objective of the ARM framework is to manage sustainable harvest of Delaware Bay horseshoe crabs while maintaining ecosystem integrity and supporting Red Knot recovery with adequate stopover habitat for Red Knots and other migrating shorebirds. For annual harvest recommendations, the ARM framework requires annual estimates of horseshoe crab population size and the Red Knot stopover population size. The 2023 population size estimate will inform harvest recommendations in the next management cycle for decision making by the Atlantic States Marine Fisheries Commission.

Delaware, New Jersey↗
USGS2019

Spatio-temporal population change of Arctic-breeding waterbirds on the Arctic Coastal Plain of Alaska

Rapid physical changes that are occurring in the Arctic are primary drivers of landscape change and thus may drive population dynamics of Arctic-breeding birds. Despite the importance of this region to breeding and molting waterbirds, lack of a comprehensive analysis of historic data has hindered quantifying avian population change. We estimated distribution, abundance, and spatially explicit population trend of 20 breeding waterbird species using 25 years (1992–2016) of aerial survey data collected on the Arctic Coastal Plain (ACP), Alaska. The ACP is an extensive wetland complex on Alaska’s North Slope that supports millions of breeding waterbirds and includes portions of the National Petroleum Reserve—Alaska and the Arctic National Wildlife Refuge. We summarized annual counts into approximately 6-km by 6-km grid cells and analyzed data with generalized linear mixed models that accounted for survey timing and spatio-temporal autocorrelation. Geese and swans were most abundant along the coast between Admiralty Bay and Prudhoe Bay. Sea ducks, generalist predators (i.e., jaeger, gulls, terns), and loons were most abundant between Utqiaġvik and Point Lay, Alaska. Important areas for most species included the coastal fringe near Teshekpuk Lake, the Colville River Delta, and Admiralty Bay. The National Petroleum Reserve—Alaska was an important area for all species examined. Conversely, density on the coastal plain of the Arctic National Wildlife Refuge was greater than average for 20% of species. Annual population growth rates over the 25-year survey period were variable: 13 increased (range: 1.4%–13.8%), one decreased (-3.4%), and six were stable. However, even species with no overall population trend had areas of changing population size, suggesting localized conditions affected waterbird distributions on the ACP. Our results can be used to better inform land use decisions, improve monitoring of waterbird populations, and increase understanding of avian response to ecological change in the Arctic.

Alaska↗
USGS2011

Using avian radar to examine relationships among avian activity, bird strikes, and meteorological factors

Radar systems designed to detect avian activity at airfields are useful in understanding factors that influence the risk of bird and aircraft collisions (bird strikes). We used an avian radar system to measure avian activity at Beale Air Force Base, California, USA, during 2008 and 2009. We conducted a 2-part analysis to examine relationships among avian activity, bird strikes, and meteorological and time-dependent factors. We found that avian activity around the airfield was greater at times when bird strikes occurred than on average using a permutation resampling technique. Second, we developed generalized linear mixed models of an avian activity index (AAI). Variation in AAI was first explained by seasons that were based on average migration dates of birds at the study area. We then modeled AAI by those seasons to further explain variation by meteorological factors and daily light levels within a 24- hour period. In general, avian activity increased with decreased temperature, wind, visibility, precipitation, and increased humidity and cloud cover. These effects differed by season. For example, during the spring bird migration period, most avian activity occurred before sunrise at twilight hours on clear days with low winds, whereas during fall migration, substantial activity occurred after sunrise, and birds generally were more active at lower temperatures. We report parameter estimates (i.e., constants and coefficients) averaged across models and a relatively simple calculation for safety officers and wildlife managers to predict AAI and the relative risk of bird strike based on time, date, and meteorological values. We validated model predictability and assessed model fi t. These analyses will be useful for general inference of avian activity and risk assessment efforts. Further investigation and ongoing data collection will refine these inference models and improve our understanding of factors that influence avian activity, which is necessary to inform management decisions aimed at reducing risk of bird strikes.

California↗
USGS2007

An evaluation of the effects of conservation and fishery enhancement hatcheries on wild populations of salmon

The historical, political and scientific aspects of salmon hatchery programmes designed to enhance fishery production, or to recover endangered populations, are reviewed. We start by pointing out that the establishment of hatcheries has been a political response to societal demands for harvest and conservation; given this social context, we then critically examined the levels of activity, the biological risks, and the economic analysis associated with salmon hatchery programmes. A rigorous analysis of the impacts of hatchery programmes was hindered by the lack of standardized data on release sizes and survival rates at all ecological scales, and since hatchery programme objectives are rarely defined, it was also difficult to measure their effectiveness at meeting release objectives. Debates on the genetic effects of hatchery programmes on wild fish have been dominated by whether correct management practices can reduce negative outcomes, but we noted that there has been an absence of programmatic research approaches addressing this important issue. Competitive interactions between hatchery and wild fish were observed to be complex, but studies researching approaches to reduce these interactions at all ecological scales during the entire salmon life history have been rare, and thus are not typically considered in hatchery management. Harvesting of salmon released from fishery enhancement hatcheries likely impacts vulnerable wild populations; managers have responded to this problem by mass marking hatchery fish, so that fishing effort can be directed towards hatchery populations. However, we noted that the effectiveness of this approach is dependant on accurate marking and production of hatchery fish with high survival rates, and it is not yet clear whether selective fishing will prevent overharvest of wild populations. Finally, research demonstrating disease transmission from hatchery fish to wild populations was observed to be equivocal; evidence in this area has been constrained by the lack of effective approaches to studying the fate of pathogens in the wild. We then reviewed several approaches to studying the economic consequences of hatchery activities intended to inform the social decisions surrounding programmes, but recognized that placing monetary value on conservation efforts or on hatcheries that mitigate cultural groups’ loss of historical harvest opportunities may complicate these analyses. We noted that economic issues have rarely been included in decision making on hatchery programmes. We end by identifying existing major knowledge gaps, which, if filled, could contribute towards a fuller understanding of the role that hatchery programmes could play in meeting divergent goals. However, we also recognized that many management recommendations arising from such research may involve trade-offs between different risks, and that decisions about these trade-offs must occur within a social context. Hatcheries have played an important role in sustaining some highly endangered populations, and it is possible that reform of practices will lead to an increase in the number of successful programmes. However, a serious appraisal of the role of hatcheries in meeting broader needs is urgently warranted and should take place at the scientific, but more effectively, at the societal level.

Advances in Marine Biology↗
USGS2015

Applications of optical sensors for high-frequency water-quality monitoring and research

The recent commercial availability of in-situ optical sensors, together with new techniques for data collection and analysis, provides the opportunity to monitor a wide range of water-quality constituents over time scales during which environmental conditions actually change. Traditional approaches for data collection (daily to monthly discrete samples) are often limited by high sample collection, processing, and analytical costs, difficult site access, and logistical challenges, particularly for long-term sampling at a large number of sites. Optical sensors that continuously measure constituents in the environment by absorbance or fluorescence properties (Figure 1) have had a long history of use in oceanography for measuring highly resolved concentrations and fluxes of organic matter, nutrients, and algal material. However, much of the work using commercially-available optical sensors in rivers and streams has taken place in only the last few years. Figure 1. [NOT SHOWN] Optical sensor technology is now sufficiently developed to warrant broader application for research and monitoring in coastal and freshwater systems, and the United States Geological Survey (a U.S. science agency) is now using these sensors in a variety of research and monitoring programs to better understand water quality in-situ and in real-time. Examples are numerous and range from the applications of nitrate sensors for calculating loads to estuaries susceptible to hypoxia (Pellerin et al., 2014) to the use of fluorometers to estimate methymercury fluxes (Bergamaschi et al., 2011) and disinfection byproduct formation (Carpenter et al., 2013). Transmitting these data in real-time provides information that can be used for early trend detection, help identify monitoring gaps critical for water management, and provide science-based decision support across a range of issues related to water quality, freshwater ecosystems, and human health. Despite the value of these sensors, collecting data that meet high-quality standards requires investment in and adherence to tested and established methods and protocols for sensor operation and data management (Pellerin et al., 2013). For example, optical sensor measurements can be strongly influenced by a variety of matrix effects, including water temperature, inner filtering from highly colored water, and scattering of light by suspended particles (Downing et al., 2012). Characterizing and correcting sensors for these effects – as well as the continued development of common methodologies and protocols for sensor use – will be critical to ensuring comparable measurements across sites and over time. In addition, collaborative efforts such as the Nutrient Sensor Challenge (www.nutrients-challenge.org) will continue to accelerate the development, production and use of affordable, reliable and accurate sensors for a range of environments. REFERENCES Bergamaschi .B.A., Fleck J.A., Downing B.D., Boss E., Pellerin B.A., Ganju N.K., Schoellhamer D.H., Byington A.A., Heim W.A., Stephenson M., Fujii R. (2011), Methyl mercury dynamics in a tidal wetland quantified using in situ optical measurements. Limnology and Oceanography, 56(4): 1355-1371. Carpenter K.D., Kraus T.E.C., Goldman J.H., Saraceno J., Downing B.D., Bergamaschi B.A., McGhee G., Triplett T. (2013), Sources and Characteristics of Organic Matter in the Clackamas River, Oregon, Related to the Formation of Disinfection By-products in Treated Drinking Water: U.S. Geological Survey Scientific Investigations Report 2013–5001, 78 p. Downing .B.D., Pellerin B.A., Bergamaschi B.A., Saraceno J., Kraus T.E.K. (2012), Seeing the light: The effects of particles, temperature and inner filtering on in situ CDOM fluorescence in rivers and streams. Limnology and Oceanography: Methods, 10: 767-775. Pellerin B.A., Bergamaschi B.A., Downing B.D., Saraceno J., Garrett J.D., Olsen L.D. (2013), Optical Techniques for the Determination of Nitrate in En

Conference Paper↗
USGS2009

NBII-SAIN Data Management Toolkit

The Strategic Plan for the U.S. Geological Survey Biological Informatics Program (2005-2009) recognizes the need for effective data management: Though the Federal government invests more than $600 million per year in biological data collection, it is difficult to address these issues because of limited accessibility and lack of standards for data and information...variable quality, sources, methods, and formats (for example observations in the field, museum specimens, and satellite images) present additional challenges. This is further complicated by the fast-moving target of emerging and changing technologies such as GPS and GIS. Even though these technologies offer new solutions, they also create new informatics challenges (Ruggiero and others, 2005). The USGS National Biological Information Infrastructure program, hereafter referred to as NBII, is charged with the mission to improve the way data and information are gathered, documented, stored, and accessed. The central objective of this project is a direct reflection of the purpose of NBII as described by John Mosesso, Program Manager of the U.S. Geological Survey-Biological Informatics Program-GAP Analysis: At the outset, the reason for bringing about NBII was that there were significant amounts of data and information scattered all over the U.S., not accessible, in incompatible formats, and that NBII was tasked with addressing this problem...NBII's focus is to pull data together that truly matters to someone or communities. Essentially, the core questions are: 1) what are the issues, 2) where is the data, and 3) how can we make it usable and accessible (John Mosesso, U.S. Geological Survey, oral commun., 2006). Redundancy in data collection can be a major issue when multiple stakeholders are involved with a common effort. In 2001 the U.S. General Accounting Office (USGAO) estimated that about 50 percent of the Federal government's geospatial data at the time was redundant. In addition, approximately 80 percent of the cost of a spatial information system is associated with spatial data collection and management (U.S. General Accounting Office, 2003). These figures indicate that the resources (time, personnel, money) of many agencies and organizations could be used more efficiently and effectively. Dedicated and conscientious data management coordination and documentation is critical for reducing such redundancy. Substantial cost savings and increased efficiency are direct results of a pro-active data management approach. In addition, details of projects as well as data and information are frequently lost as a result of real-world occurrences such as the passing of time, job turnover, and equipment changes and failure. A standardized, well documented database allows resource managers to identify issues, analyze options, and ultimately make better decisions in the context of adaptive management (National Land and Water Resources Audit and the Australia New Zealand Land Information Council on behalf of the Australian National Government, 2003). Many environmentally focused, scientific, or natural resource management organizations collect and create both spatial and non-spatial data in some form. Data management appropriate for those data will be contingent upon the project goal(s) and objectives and thus will vary on a case-by-case basis. This project and the resulting Data Management Toolkit, hereafter referred to as the Toolkit, is therefore not intended to be comprehensive in terms of addressing all of the data management needs of all projects that contain biological, geospatial, and other types of data. The Toolkit emphasizes the idea of connecting a project's data and the related management needs to the defined project goals and objectives from the outset. In that context, the Toolkit presents and describes the fundamental components of sound data and information management that are common to projects involving biological, geospatial, and other related data

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USGS2022

Great Lakes spatial priorities study

Spatial data about the bathymetry, habitat characteristics, underlying geology, and other features of the ocean and inland seas are essential for decision-making. Marine research and management organizations use these data to help ensure safe navigation, promote sustainable fisheries, extract energy, and protect marine habitats in the coastal and ocean waters of the U.S. Exclusive Economic Zone (EEZ) and Laurentian Great Lakes. Many of these organizations may have overlapping or shared mapping interests without knowing it. In a multi-jurisdictional planning environment, it can be challenging and cumbersome to determine where other entities have shared or overlapping mapping interests, especially across a transnational region such as the Great Lakes. State and provincial governments, federal governments, academia, tribes and First Nations, and other stakeholders from both the U.S. and Canada all have mapping interests across Great Lakes waters. Identifying and communicating target geographies for new data collection that are shared among multiple organizations can both help to avoid redundancy of new mapping efforts, and create opportunities for greater efficiency through collaboration. To address this issue, a spatial priorities study was conducted using a geospatial tool developed by the National Ocean Services National Centers for Coastal and Ocean Science (NCCOS). The tool provided an easy-to-use online interface in which programs can identify their priorities in a simple and straightforward way. This study asked representatives of Great Lakes management and science organizations to identify the areas for which they needed maps of lakebed features on a near-term, mid-term, and long-term timeframe, and why. Then, the responses were analyzed and overlaid to determine areas of shared mapping need and opportunity and to determine the types of map products needed. The analysis revealed high interest among multiple organizations in discrete geographies including the Minnesota and Wisconsin shoreline from Duluth to the eastern extent of the Bayfield Peninsula, Green Bay in Lake Michigan, and the southern coastlines of Lake Erie and Lake Ontario, the St. Marys River, and the northern Lake Superior coastal waters near Grand Portage, MN. Lower priority mapping interest were distributed widely across all lakes, but tended to be concentrated in nearshore areas (<30 m depth). The analysis also indicated that the top mapping justifications were Habitat/biota/natural area, Benthic exploration, Commercial and recreational fishing, and Scientific research. The top desired map product types were Elevation, Substrate/sub-bottom geologic characterization, and Habitat map/characterization, although participants on some lakes noted other less prevalent product types. Following from previously conducted NOAA and non-NOAA Federal spatial prioritization exercises, the results of this regional focus can help mapping organizations better understand how their priorities align with the needs of regional organizations, allow for more efficient coordination and funding, and enable partners to leverage assets and resources to fill their most pressing data and information gaps across Great Lakes waters. The U.S. Mapping Coordination Site hosts the results of this study and other spatial prioritization studies. Through this website, one can interact with the study results along with recent and planned mapping efforts. NOAA intends to update their spatial priorities on a three- to five-year basis. Future studies should strive to expand participation of federal agencies, state and local governments, federally-recognized tribes, academia, and private industry (among other stakeholders) to seek out ocean mapping partnerships in conjunction with the National Ocean Mapping, Exploration and Characterization (NOMEC) goals map once, use many times.”

Great Lakes↗
USGS2013

Merapi 2010 eruption—Chronology and extrusion rates monitored with satellite radar and used in eruption forecasting

Despite dense cloud cover, satellite-borne commercial Synthetic Aperture Radar (SAR) enabled frequent monitoring of Merapi volcano's 2010 eruption. Near-real-time interpretation of images derived from the amplitude of the SAR signals and timely delivery of these interpretations to those responsible for warnings, allowed satellite remote sensing for the first time to play an equal role with in situ seismic, geodetic and gas monitoring in guiding life-saving decisions during a major volcanic crisis. Our remotely sensed data provide an observational chronology for the main phase of the 2010 eruption, which lasted 12 days (26 October–7 November, 2010). Unlike the prolonged low-rate and relatively low explosivity dome-forming and collapse eruptions of recent decades at Merapi, the eruption began with an explosive eruption that produced a new summit crater on 26 October and was accompanied by an ash column and pyroclastic flows that extended 8 km down the flanks. This initial explosive event was followed by smaller explosive eruptions on 29 October–1 November, then by a period of rapid dome growth on 1–4 November, which produced a summit lava dome with a volume of ~ 5 × 10 6 m 3 . A paroxysmal VEI 4 magmatic eruption (with ash column to 17 km altitude) destroyed this dome, greatly enlarged the new summit crater and produced extensive pyroclastic flows (to ~ 16 km radial distance in the Gendol drainage) and surges during the night of 4–5 November. The paroxysmal eruption was followed by a period of jetting of gas and tephra and by a second short period (12 h) of rapid dome growth on 6 November. The eruption ended with low-level ash and steam emissions that buried the 6 November dome with tephra and continued at low levels until seismicity decreased to background levels by about 23 November. Our near-real-time commercial SAR documented the explosive events on 26 October and 4–5 November and high rates of dome growth (> 25 m 3 s − 1 ). An event tree analysis for the previous 2006 Merapi eruption indicated that for lava dome extrusion rates > 1.2 m 3 s − 1 , the probability of a large (1872-scale) eruption was ~ 10%. Consequently, the order-of-magnitude greater rates in 2010, along with the explosive start of the eruption on 26 October, the large volume of lava accumulating at the summit by 4 November, and the rapid and large increases in seismic energy release, deformation and gas emissions were the basis for warnings of an unusually large eruption by the Indonesian Geological Agency's Center for Volcanology and Geologic Hazard Mitigation (CVGHM) and their Volcano Research and Technology Development Center (BPPTK) in Yogyakarta — warnings that saved thousands of lives.

Merapi Volcano↗
USGS2006

Integrating Stakeholders and Users into the Geography Discipline's Research Process

Future research priorities of Geography emphasize the discipline's leadership role in the U.S. Geological Survey (USGS) in multidisciplinary and integrated research on human and environmental systems and how these systems are interrelated and respond to change Geography's research priorities also emphasize providing science that is usable to society and creating decision support products applicable to given customer problems. To achieve these goals, we must understand the relationship between our research and our customer, and how to integrate the customer into the research process. This report details the elements of the research process that help achieve the degree of stakeholder involvement necessary to ensure a successful end-product. It offers suggestions that can help researchers better understand stakeholders and customers and involve them in the research process more effectively, while preserving the integrity of the science. Its aim is to help researchers understand the problems and challenges faced by our customers and communicate the ways in which Geography can help address their problems. Adopting these guidelines can improve the efficiency of the research process and lead to higher quality output. We will be able to conduct better research because we will have an improved understanding of the research problem and the stakeholders involved. This report covers a broad range of topics, from identifying and communicating with stakeholders and users, to the use of language, to how to effectively present scientific information to the user. It does not offer a 'one size fits all' method. Instead, perhaps only specific sections are suitable for a given project and customers, depending on project scope and needs. This report is based on the objectives of Geography's strategic plan, U. S. Geological Survey's strategic plan, and Department of Interior's strategic plan. Section 2 of these guidelines describes the purpose of the research process in Geography and the need for better user involvement in the process. Section 3 explains how to conduct a stakeholder analysis. Section 4 explains how to conduct a user-needs assessment.

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