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At least 973 records · Page 54Linked to original sources

USGS2005

Drainage ditches facilitate frog movements in a hostile landscape

Ditches are common in landscapes influenced by agricultural, forestry, and peat mining activities, and their value as corridors remains unassessed. Pond-breeding amphibians can encounter hostile environments when moving between breeding, summering, or hibernation sites, and are likely to benefit from the presence of ditches in the landscape. Within a system consisting of ditch networks in bogs mined for peat in eastern New Brunswick, Canada, I quantified the breeding, survival, and movements of green frogs (Rana clamitans melanota) in drainage ditches and also surveyed peat fields. Frogs rarely ventured on peat fields and most individuals frequented drainage ditches containing water, particularly in late summer. Though frogs did not breed in ditches, their survival rate in ditches was high (88%). Ditches did not hinder frog movements, as frogs moved independently of the current. Results indicate that drainage ditches containing water enable some movements between habitats isolated by peat mining, in contrast to peat surfaces, and suggest they function as amphibian movement corridors. Thus, such drainage ditches may mitigate the effects of peat extraction on amphibian populations. At the very least, these structures provide an alternative to hostile peat surfaces. This study highlights that small-scale corridors are potentially valuable in population dynamics. ?? Springer 2005.

Landscape Ecology↗

USGS2021

Responses of vertebrate wildlife to oil and natural gas development: Patterns and frontiers

Purpose of Review Anthropogenic activities can lead to the loss, fragmentation, and alteration of wildlife habitats. I reviewed the recent literature (2014–2019) focused on the responses of avian, mammalian, and herpetofaunal species to oil and natural gas development, a widespread and still-expanding land use worldwide. My primary goals were to identify any generalities in species’ responses to development and summarize remaining gaps in knowledge. To do so, I evaluated the directionality of a wide variety of responses in relation to taxon, location, development type, development metric, habitat type, and spatiotemporal aspects. Recent Findings Studies ( n = 70) were restricted to the USA and Canada, and taxonomically biased towards birds and mammals. Longer studies, but not those incorporating multiple spatial scales, were more likely to detect significant responses. Negative responses of all types were present in relatively low frequencies across all taxa, locations, development types, and development metrics but were context-dependent. The directionality of responses by the same species often varied across studies or development metrics. Summary The state of knowledge about wildlife responses to oil and natural gas development has developed considerably, though many biases and gaps remain. Studies outside of North America and that focus on herpetofauna are lacking. Tests of mechanistic hypotheses for effects, long-term studies, assessment of response thresholds, and experimental designs that isolate the effects of different stimuli associated with development, remain critical. Moreover, tests of the efficacy of habitat mitigation efforts have been rare. Finally, investigations of the demographic effects of development across the full annual cycle were absent for non-game species and are critical for the estimation of population-level effects.

Current Landscape Ecology Reports↗

USGS2019

Towards recovery of an endangered island endemic: Distributional and behavioral responses of Key Largo woodrats associated with exotic predator removal

Exotic predators create novel ecological contexts for native species, particularly when prey exhibit predator naïve behaviors. Population recovery of island endemic species following predator eradication has been documented broadly, but studies examining mammalian prey behavioral responses to exotic predator removal are less common. The Key Largo woodrat ( Neotoma floridana smalli ) is an endangered Florida endemic species that exhibited drastic declines, signified by the loss of natural stick-nests, over the past three decades due to habitat loss and effects from exotic predators. We conducted camera trap surveys of woodrats at supplemental nests and used dynamic multistate occupancy models to evaluate changes in woodrat distribution and stick-nest building behavior over a two-year period of exotic predator (domestic cats [ Felis catus ] and Burmese pythons [ Python bivittatus ]) removal. The distribution of woodrats using supplemental nests increased from 27% to 39% in the two-year period, while the proportion of occupied supplemental nests with stick-nests increased from 37% in 2013 to 54% in 2015. The probabilities of supplemental nest use and stick-nest building behavior increased over time following a gradient away from the northern extent of Key Largo, an area associated with high cat activity and the only sites of python captures during the surveys. Woodrats that built stick-nests were more detectable than those that did not, which suggests that stick-nest building could make woodrats more susceptible to predation from novel predators when performing the behavior. We documented increasing woodrat occurrence, along with increasing stick-nest building behavior, which supports recovery and management objectives focused on exotic predator removal.

Florida↗

USGS2003

Effects of life-state on detectability in a demographic study of the terrestrial orchid Cleistes bifaria

1. Most plant demographic studies follow marked individuals in permanent plots. Plots tend to be small, so detectability is assumed to be one for every individual. However, detectability could be affected by factors such as plant traits, time, space, observer, previous detection, biotic interactions, and especially by life - state . 2. We used a double-observer survey and closed population capture-recapture modelling to estimate state -specific detectability of the orchid Cleistes bifaria in a long-term study plot of 41.2 m 2 . Based on AIC c model selection, detectability was different for each life - state and for tagged vs. previously untagged plants. There were no differences in detectability between the two observers. 3. Detectability estimates (SE) for one-leaf vegetative, two-leaf vegetative, and flowering/fruiting states correlated with mean size of these states and were 0.76 (0.05), 0.92 (0.06), and 1 (0.00), respectively, for previously tagged plants, and 0.84 (0.08), 0.75 (0.22), and 0 (0.00), respectively, for previously untagged plants. (We had insufficient data to obtain a satisfactory estimate of previously untagged flowering plants). 4. Our estimates are for a medium-sized plant in a small and intensively surveyed plot. It is possible that detectability is even lower for larger plots and smaller plants or smaller life -states (e.g. seedlings) and that detectabilities < I are widespread in plant demographic studies. 5. State -dependent detectabilities are especially worrying since they will lead to a size- or state -biased sample from the study plot. Failure to incorporate detectability into demographic estimation methods introduces a bias into most estimates of population parameters such as fecundity, recruitment, mortality, and transition rates between life -states. We illustrate this by a simple example using a matrix model, where a hypothetical population was stable but, due to imperfect detection, wrongly projected to be declining at a rate of 8% per year. 6. Almost all plant demographic studies are based on models for discrete states. State and size are important predictors both for demographic rates and detectability . We suggest that even in studies based on small plots, state - or size-specific detectability should be estimated at least at some point to avoid biased inference about the dynamics of the population sampled.

Journal of Ecology↗

USGS2016

Large-scale recovery of an endangered amphibian despite ongoing exposure to multiple stressors

Amphibians are one of the most threatened animal groups, with 32% of species at risk for extinction. Given this imperiled status, is the disappearance of a large fraction of the Earth’s amphibians inevitable, or are some declining species more resilient than is generally assumed? We address this question in a species that is emblematic of many declining amphibians, the endangered Sierra Nevada yellow-legged frog ( Rana sierrae ). Based on >7,000 frog surveys conducted across Yosemite National Park over a 20-y period, we show that, after decades of decline and despite ongoing exposure to multiple stressors, including introduced fish, the recently emerged disease chytridiomycosis, and pesticides, R. sierrae abundance increased sevenfold during the study and at a rate of 11% per year. These increases occurred in hundreds of populations throughout Yosemite, providing a rare example of amphibian recovery at an ecologically relevant spatial scale. Results from a laboratory experiment indicate that these increases may be in part because of reduced frog susceptibility to chytridiomycosis. The disappearance of nonnative fish from numerous water bodies after cessation of stocking also contributed to the recovery. The large-scale increases in R. sierrae abundance that we document suggest that, when habitats are relatively intact and stressors are reduced in their importance by active management or species’ adaptive responses, declines of some amphibians may be partially reversible, at least at a regional scale. Other studies conducted over similarly large temporal and spatial scales are critically needed to provide insight and generality about the reversibility of amphibian declines at a global scale.

Proceedings of the National Academy of Sciences of↗

USGS1998

Breeding synchrony and extrapair fertilizations in two populations of red-winged blackbirds

We tested the relationship between synchrony of breeding and the frequency of extrapair fertilizations (EPFs) in two populations of red-winged blackbirds known to differ in female extrapair behavior. We found no association between the number of simultaneously fertilizable females (temporal neighbors) and EPF rate in either population, although a significant difference between populations in the direction of this relationship (positive where females initiated extrapair copulations and negative where males initiated them) suggested a modest difference in the influence of synchrony. Males losing offspring to EPFs tended to have more fertilizable females at that time than the actual sires in some analyses but not in others. We also tested several assumptions underlying two competing hypotheses for the effects of synchrony. We found no evidence that females pursued extrapair copulations more often when other females were synchronous. Rather, females were more likely to gain EFFs with exirapatr males whose social mates were not yet building their nests. Synchrony also did not consistently affect male pursuit of exirapair copulations or achievement of EPFs. These results suggest that timing of breeding has some effects on extrapair activity, but that those effects are both relatively weak and influenced by other factors that vary between years or populations.

Behavioral Ecology↗

USGS2010

Age and sex specific timing, frequency, and spatial distribution of horseshoe crab spawning in Delaware Bay: Insights from a large-scale radio telemetry array

To study horseshoe crab Limulus polyphemus spawning behavior and migration over a large-spatial extent (>100 km), we arrayed fixed station radio receivers throughout Delaware Bay and deployed radio transmitters and archival tags on adult horseshoe crabs prior to their spawning season. We tagged and released 160 females and 60 males in 2004 and 217 females in 2005. The array covered approximately 140 km of shoreline. Recapture rates were >70% with multi-year recaptures. We categorized adult age by carapace wear. Older females tended to spawn earlier in the season and more frequently than young females, but those tendencies were more apparent in 2004 when spawning overall occurred earlier than in 2005 when spawning was delayed possibly due to decreased water temperatures. Timing of initial spawning within a year was correlated with water temperature. After adjusting for day of first spring tide, the day of first spawning was 4 days earlier for every 1 degree (̊C) rise in mean daily water temperature in May. Seventy nine % of spawning occurred during nighttime high tides. Fifty five % of spawning occurred within 3 d of a spring tide, which was slightly higher than the 47% expected if spawning was uniformly distributed regardless of tidal cycle. Within the same spawning season, males and females were observed spawning or intertidally resting at more than one beach separated by >5 km. Between years, most (77%) did not return to spawn at the same beach. Probability of stranding was strongly age dependent for males and females with older adults experiencing higher stranding rates. Horseshoe crabs staging in the shallow waters east of the channel spawned exclusively along the eastern (NJ) shoreline, but those staging west of the channel spawned throughout the bay. Overall, several insights emerged from the use of radio telemetry, which advances our understanding of horseshoe crab ecology and will be useful in conserving the Delaware Bay horseshoe crab population and habitats.

Delaware, New Jersey↗

USGS2021

Ashmole's hypothesis and the latitudinal gradient in clutch size

One enduring priority for ecologists has been to understand the cause(s) of variation in reproductive effort among species and localities. Avian clutch size generally increases with increasing latitude, both within and across species, but the mechanism(s) driving that pattern continue to generate hypotheses and debate. In 1961, a Ph.D. student at Oxford University, N. Philip Ashmole, proposed the influential hypothesis that clutch size varies in direct proportion to the seasonality of resources available to a population. Ashmole's hypothesis has been widely cited and discussed in the ecological literature. However, misinterpretation and confusion has been common regarding the mechanism that underlies Ashmole's hypothesis and the testable predictions it generates. We review the development of well-known hypotheses to explain clutch size variation with an emphasis on Ashmole's hypothesis. We then discuss and clarify sources of confusion about Ashmole's hypothesis in the literature, summarise existing evidence in support and refutation of the hypothesis, and suggest some under-utilised and novel approaches to test Ashmole's hypothesis and gain an improved understanding of the mechanisms responsible for variation in avian clutch size and fecundity, and life-history evolution in general.

Biological Reviews↗

USGS2013

Permeability of roads to movement of scrubland lizards and small mammals

A primary objective of road ecology is to understand and predict how roads affect connectivity of wildlife populations. Road avoidance behavior can fragment populations, whereas lack of road avoidance can result in high mortality due to wildlife-vehicle collisions. Many small animal species focus their activities to particular microhabitats within their larger habitat. We sought to assess how different types of roads affect the movement of small vertebrates and to explore whether responses to roads may be predictable on the basis of animal life history or microhabitat preferences preferences. We tracked the movements of fluorescently marked animals at 24 sites distributed among 3 road types: low-use dirt, low-use secondary paved, and rural 2-lane highway. Most data we collected were on the San Diego pocket mouse ( Chaetodipus fallax ), cactus mouse ( Peromyscus eremicus ), western fence lizard ( Sceloporus occidentalis ), orange-throated whiptail ( Aspidoscelis hyperythra ), Dulzura kangaroo rat ( Dipodomys simulans ) (dirt, secondary paved), and deer mouse (Peromyscus maniculatus) (highway only). San Diego pocket mice and cactus mice moved onto dirt roads but not onto a low-use paved road of similar width or onto the highway, indicating they avoidpaved road substrate. Both lizard species moved onto the dirt and secondary paved roads but avoided the rural 2-lane rural highway, indicating they may avoid noise, vibration, or visual disturbance from a steady flow of traffic. Kangaroo rats did not avoid the dirt or secondary paved roads. Overall, dirt and secondary roads were more permeable to species that prefer to forage or bask in open areas of their habitat, rather than under the cover of rocks or shrubs. However, all study species avoided the rural 2-lane highway. Our results suggest that microhabitat use preferences and road substrate help predict species responses to low-use roads,but roads with heavy traffic may deter movement of a much wider range of small animal species.

California↗

USGS2019

Consistent compensatory growth offsets poor condition in trout populations

1. Compensatory growth – when individuals in poor condition grow rapidly to “catch up” to conspecifics – may be a mechanism that allows individuals to tolerate stressful environmental conditions, both abiotic and biotic. This phenomenon has been documented fairly widely in laboratory and field experiments, but evidence for compensatory growth in the wild is scarce. 2. Cutthroat trout (Oncorhynchus clarkii subsp) are cold-water specialists that inhabit streams in montane ecosystems where seasonal conditions can be harsh and growth rates vary greatly among seasons. Understanding if individuals compensate for periods of reduced growth and body condition will improve understanding of the requirements of fish throughout their life-cycle and across freshwater habitats. 3. We quantified compensatory growth of juvenile cutthroat trout using extensive mark-recapture data from 11 stream populations (1,125 individuals) and two subspecies inhabiting a wide range of ecological settings in the northern Rocky Mountains, USA. Our objectives were to determine how growth was linked across seasons and determine if individuals behaviorally compensated for depressed body condition via emigration. 4. Fish in relatively poor condition consistently demonstrated compensatory growth in mass during subsequent seasons. In contrast, fish in relatively better condition responded with positive growth in length during the summer signaling these fish may be better suited to headwater environments; no compensatory growth in length was found during the winter. Furthermore, we found no evidence that individual condition mediated migration tendencies of fish to seek more favorable habitat. 5. Across a wide range of environmental conditions, we found consistent empirical support for compensatory growth in mass in the wild. A critical next step is to quantify how changing abiotic and biotic conditions influence the ability of stream fishes to compensate for locally or seasonally challenging conditions, thereby affecting long-term resiliency, viability, and adaptation in the face of changing environmental conditions.

Montana, Wyoming↗

USGS2005

A space‐for‐time substitution reveals the long‐term decline in genotypic diversity of a widespread salt marsh plant, Spartina alterniflora, over a span of 1500 years

Clonal populations face a trade‐off between sexual recruitment and vegetative growth and, once established, may undergo continuous declines in genotypic diversity if their sexual recruits make poor competitors. The geological history of delta formation in the Lower Mississippi River Valley was used to age eight S. alterniflora marshes for use in a space‐for‐time substitution ranging over 1500 years, in order to determine the long‐term effects of clonal growth on genotypic diversity in natural populations. 2 We also predicted that highly heterozygous clones are competitively superior, leading to an increase in the overall level of genetic diversity as a marsh ages and/or to an increasingly positive relationship between clone size and individual heterozygosity, and that the clumping of ramets within clones will occur over increasingly large distances as populations age, while the clumping of genetically related clones will become less pronounced as intraclonal competition begins to obscure the initial effects of localized seedling recruitment. Using molecular markers to differentiate clones, we documented a decline in clonal richness at the rate of approximately 1% 100 years −1 that was accompanied for the first 300–500 years by an increase in the distance over which clumping of ramets within genets occurred. Older populations, in the 500–1500‐year range, showed evidence of clone fragmentation. The spatial clustering of kin was observed for only two marshes, and exhibited no clear relationship with marsh age. Whereas the overall level of genetic diversity was consistent among marshes and showed no clear relationship with marsh age, the relationship between heterozygosity and individual clone size became increasingly pronounced within older marshes. Our results suggest that under natural conditions S. alterniflora marshes will rarely reach ages sufficient for the loss of all clonal diversity, or for the effects of inbreeding and drift to pose a significant threat to population viability.

Journal of Ecology↗

USGS2007

Atlantic reef fish biogeography and evolution

Aim: To understand why and when areas of endemism (provinces) of the tropical Atlantic Ocean were formed, how they relate to each other, and what processes have contributed to faunal enrichment. Location: Atlantic Ocean. Methods: The distributions of 2605 species of reef fishes were compiled for 25 areas of the Atlantic and southern Africa. Maximum-parsimony and distance analyses were employed to investigate biogeographical relationships among those areas. A collection of 26 phylogenies of various Atlantic reef fish taxa was used to assess patterns of origin and diversification relative to evolutionary scenarios based on spatio-temporal sequences of species splitting produced by geological and palaeoceanographic events. We present data on faunal (species and genera) richness, endemism patterns, diversity buildup (i.e. speciation processes), and evaluate the operation of the main biogeographical barriers and/or filters. Results: Phylogenetic (proportion of sister species) and distributional (number of shared species) patterns are generally concordant with recognized biogeographical provinces in the Atlantic. The highly uneven distribution of species in certain genera appears to be related to their origin, with highest species richness in areas with the greatest phylogenetic depth. Diversity buildup in Atlantic reef fishes involved (1) diversification within each province, (2) isolation as a result of biogeographical barriers, and (3) stochastic accretion by means of dispersal between provinces. The timing of divergence events is not concordant among taxonomic groups. The three soft (non-terrestrial) inter-regional barriers (mid-Atlantic, Amazon, and Benguela) clearly act as 'filters' by restricting dispersal but at the same time allowing occasional crossings that apparently lead to the establishment of new populations and species. Fluctuations in the effectiveness of the filters, combined with ecological differences among provinces, apparently provide a mechanism for much of the recent diversification of reef fishes in the Atlantic. Main conclusions: Our data set indicates that both historical events (e.g. Tethys closure) and relatively recent dispersal (with or without further speciation) have had a strong influence on Atlantic tropical marine biodiversity and have contributed to the biogeographical patterns we observe today; however, examples of the latter process outnumber those of the former. ?? 2007 The Authors.

Journal of Biogeography↗

USGS2012

Seed harvesting by a generalist consumer is context-dependent: Interactive effects across multiple spatial scales

Granivore foraging decisions affect consumer success and determine the quantity and spatial pattern of seed survival. These decisions are influenced by environmental variation at spatial scales ranging from landscapes to local foraging patches. In a field experiment, the effects of seed patch variation across three spatial scales on seed removal by western harvester ants Pogonomyrmex occidentalis were evaluated. At the largest scale we assessed harvesting in different plant communities, at the intermediate scale we assessed harvesting at different distances from ant mounds, and at the smallest scale we assessed the effects of interactions among seed species in local seed neighborhoods on seed harvesting (i.e. resource–consumer interface). Selected seed species were presented alone (monospecific treatment) and in mixture with Bromus tectorum (cheatgrass; mixture treatment) at four distances from P. occidentalis mounds in adjacent intact sagebrush and non-native cheatgrass-dominated communities in the Great Basin, Utah, USA. Seed species differed in harvest, with B. tectorum being least preferred. Large and intermediate scale variation influenced harvest. More seeds were harvested in sagebrush than in cheatgrass-dominated communities (largest scale), and the quantity of seed harvested varied with distance from mounds (intermediate-scale), although the form of the distance effect differed between plant communities. At the smallest scale, seed neighborhood affected harvest, but the patterns differed among seed species considered. Ants harvested fewer seeds from mixed-seed neighborhoods than from monospecific neighborhoods, suggesting context dependence and potential associational resistance. Further, the effects of plant community and distance from mound on seed harvest in mixtures differed from their effects in monospecific treatments. Beyond the local seed neighborhood, selection of seed resources is better understood by simultaneously evaluating removal at multiple scales. Associational effects provide a useful theoretical basis for better understanding harvester ant foraging decisions. These results demonstrate the importance of ecological context for seed removal, which has implications for seed pools, plant populations and communities.

Oikos↗

USGS2017

Amphibian terrestrial habitat selection and movement patterns vary with annual life-history period

Identification of essential habitat is a fundamental component of amphibian conservation; however, species with complex life histories frequently move among habitats. To better understand dynamic habitat use, we evaluated Wood Frog ( Lithobates sylvaticus (LeConte, 1825)) habitat selection and movement patterns during the spring migration and foraging periods and described the spatiotemporal variability of habitats used during all annual life-history periods. We radio-tracked 71 frogs in Maine during 2011–2013 and evaluated spring migration, foraging activity center (FAC), and within-FAC habitat selection. Telemetered frogs spent the greatest percentage of each field season in hibernacula (≥54.4%), followed by FACs (≥25.5%), migration habitat (≥16.9%), and breeding sites (≥4.5%). FACs ranged 49 – 1 335 m 2 (568.0 ± 493.4 m 2 ) and annual home ranges spanned 1 413 – 32 165 m 2 (11 780.6 ± 12 506.1 m 2 ). During spring migration, Wood Frogs exhibited different movement patterns (e.g., turn angles), selected different habitat features, and selected habitat features less consistently than while occupying FACs, indicating that the migration and foraging periods are ecologically distinct. Habitat-use studies that do not discriminate among annual life-history periods may obscure true ecological relationships and fail to identify essential habitat necessary for sustaining amphibian populations.

Maine↗

USGS2012

An accessible method for implementing hierarchical models with spatio-temporal abundance data

A common goal in ecology and wildlife management is to determine the causes of variation in population dynamics over long periods of time and across large spatial scales. Many assumptions must nevertheless be overcome to make appropriate inference about spatio-temporal variation in population dynamics, such as autocorrelation among data points, excess zeros, and observation error in count data. To address these issues, many scientists and statisticians have recommended the use of Bayesian hierarchical models. Unfortunately, hierarchical statistical models remain somewhat difficult to use because of the necessary quantitative background needed to implement them, or because of the computational demands of using Markov Chain Monte Carlo algorithms to estimate parameters. Fortunately, new tools have recently been developed that make it more feasible for wildlife biologists to fit sophisticated hierarchical Bayesian models (i.e., Integrated Nested Laplace Approximation, ‘INLA’). We present a case study using two important game species in North America, the lesser and greater scaup, to demonstrate how INLA can be used to estimate the parameters in a hierarchical model that decouples observation error from process variation, and accounts for unknown sources of excess zeros as well as spatial and temporal dependence in the data. Ultimately, our goal was to make unbiased inference about spatial variation in population trends over time.

PLoS ONE↗

USGS2025

Drought in the Delta: Socio-ecological impacts, responses, and tools

Droughts are frequent events in the western United States, and can disrupt water supply and degrade water quality, challenging water management in the Sacramento–San Joaquin Delta (Delta). This chapter for the State of Bay–Delta Science report describes what drought means for the Delta, how drought is managed in the Delta, and how drought management has changed over time. Projections of future climate indicate the possibility of increased frequency and severity of droughts which would have increasing effects on California’s water system, society, and ecological functions within and beyond the Delta. California has experienced several major droughts in the 20th and 21st centuries, each of which has caused significant social and ecological impacts and motivated improvements in water management. Droughts decrease native fish populations, increase harmful algal blooms, and promote the spread of many invasive plant and animal species. For people living within the Delta and those that rely on Delta water exports, droughts increase drinking water costs and decrease agricultural production, negatively affecting agricultural economies and labor markets. Tools developed in response to droughts include actions that increase supply, such as building water infrastructure, actions to reduce demand, such as water conservation campaigns, and mitigation actions, such as monetary relief for drought-impacted communities. Improving drought resilience requires development of additional drought responses, increased forecasting accuracy, and increased awareness of impacts on vulnerable communities and ecosystems. Even with development of additional management actions, strategies, and regulations, there will likely be difficulties meeting the current levels of demand for water. Drought conditions already cause conflict between human and environmental uses, and with more extreme droughts possible in the future and projected increases in demand, it will be challenging to provide for all users’ needs even with major changes to water management in the Delta.

California↗

USGS2004

Modeling abundance effects in distance sampling

Distance-sampling methods are commonly used in studies of animal populations to estimate population density. A common objective of such studies is to evaluate the relationship between abundance or density and covariates that describe animal habitat or other environmental influences. However, little attention has been focused on methods of modeling abundance covariate effects in conventional distance-sampling models. In this paper we propose a distance-sampling model that accommodates covariate effects on abundance. The model is based on specification of the distance-sampling likelihood at the level of the sample unit in terms of local abundance (for each sampling unit). This model is augmented with a Poisson regression model for local abundance that is parameterized in terms of available covariates. Maximum-likelihood estimation of detection and density parameters is based on the integrated likelihood, wherein local abundance is removed from the likelihood by integration. We provide an example using avian point-transect data of Ovenbirds ( Seiurus aurocapillus ) collected using a distance-sampling protocol and two measures of habitat structure (understory cover and basal area of overstory trees). The model yields a sensible description (positive effect of understory cover, negative effect on basal area) of the relationship between habitat and Ovenbird density that can be used to evaluate the effects of habitat management on Ovenbird populations.

Maryland↗

USGS2006

The influence of disturbance events on survival and dispersal rates of Florida box turtles

Disturbances have the potential to cause long-term effects to ecosystem structure and function, and they may affect individual species in different ways. Long-lived vertebrates such as turtles may be at risk from such events, inasmuch as their life histories preclude rapid recovery should extensive mortality occur. We applied capture–mark–recapture models to assess disturbance effects on a population of Florida box turtles ( Terrapene carolina bauri ) on Egmont Key, Florida, USA. Near the midpoint of the study, a series of physical disturbances affected the island, from salt water overwash associated with several tropical storms to extensive removal of nonindigenous vegetation. These disturbances allowed us to examine demographic responses of the turtle population and to determine if they affected dispersal throughout the island. Adult survival rates did not vary significantly either between sexes or among years of the study. Survival rates did not vary significantly between juvenile and adult turtles, or among years of the study. Furthermore, neither adult nor juvenile survival rates differed significantly between pre- and post-disturbance. However, dispersal rates varied significantly among the four major study sites, and dispersal rates were higher during the pre-disturbance sampling periods compared to post-disturbance. Our results suggest few long-term effects on the demography of the turtle population. Florida box turtles responded to tropical storms and vegetation control by moving to favorable habitats minimally affected by the disturbances and remaining there. As long as turtles and perhaps other long-lived vertebrates can disperse to non-disturbed habitat, and high levels of mortality do not occur in a population, a long life span may allow them to wait out the impact of disturbance with potentially little effect on long-term population processes.

Ecological Applications↗