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At least 973 records · Page 54Linked to original sources
USGS2017

Multiscale guidance and tools for implementing a landscape approach to resource management in the Bureau of Land Management

The Bureau of Land Management (BLM) is implementing a landscape approach to resource management (hereafter, landscape approach) to more effectively work with partners and understand the effects of management decisions. A landscape approach is a set of concepts and principles used to guide resource management when multiple stakeholders are involved and goals include diverse and sustainable social, environmental, and economic outcomes. Core principles of a landscape approach include seeking meaningful participation of diverse stakeholders, considering diverse resource values in multifunctional landscapes, acknowledging the tradeoffs needed to meet diverse objectives in the context of sustainable resource management, and addressing the complexity of social and ecological processes by embracing interdisciplinarity and considering multiple and broad spatial and temporal perspectives. In chapter 1, we outline the overall goal of this report: to provide a conceptual foundation and framework for implementing a landscape approach to resource management in the BLM, focusing on the role of multiscale natural resource monitoring and assessment information. In chapter 2, we describe a landscape approach to resource management. BLM actions taken to implement a landscape approach include a major effort to compile broad-scale data on natural resource status and condition across much of the west. These broadscale data now provide a regional context for interpreting monitoring data collected at individual sites and informing decisions made for local projects. We also illustrate the utility of using multiscale data to understand potential effects of different resource management decisions, define relevant terms in landscape ecology, and identify spatial scales at which planning and management decisions may be evaluated. In chapter 3, we describe how the BLM Rapid Ecoregional Assessment program and Assessment, Inventory and Monitoring program may be integrated to provide the multiscale monitoring data needed to inform a landscape approach. We propose six core, broad-scale indicators of natural resource status and condition: the amount, spatial distribution, patch size and connectivity of ecosystems and wildlife habitats, and the pattern of existing development across the landscape. Additional supplemental broad-scale indicators may include fire return intervals, distributions of invasive species, and vulnerability of ecosystems to a changing climate. Landscape intactness is an additional derived indicator that is calculated from one or more of the core and supplemental broad-scale indicators. We then outline a process for assessing broad-scale indicators that is consistent with the overall BLM Assessment, Inventory, and Monitoring process, facilitating development of a multiscale natural resource monitoring program. Finally, we describe how broad-scale indicators of natural resource status and condition may guide field monitoring implemented through the BLM Assessment, Inventory and Monitoring program and help address complex management questions. In chapter 4, we consider the specific question of assessing the ecological integrity of rangelands across the western United States. We first define ecological integrity and its relation to land health. We then suggest that a combination of six local-scale indicators collected through field sampling at individual sites and five complementary broad-scale indicators together provide information on the composition, structure, and function of rangelands. The terrestrial monitoring indicators collected at the level of individual field sites are the amount of bare ground, vegetation composition (including invasive plants and plants of management concern), vegetation height, and the proportion of the soil surface in large intercanopy gaps. The broad-scale indicators are vegetation amount, distribution, patch size, connectivity, and productivity, along with the pattern of terrestrial development. Our suggested approach to quantifying ecological integrity focuses specifically on informing management of public lands for multiple resource uses, and illustrates how existing data collected through BLM monitoring and assessment programs may be used together to provide multiscale information on land condition across broad extents. In chapter 5, we develop a method for quantifying landscape intactness and apply this method to the western United States. Our multiscale index of landscape intactness is designed to be defensible, decomposable, and easy to understand. The foundation of the multiscale index of landscape intactness is the surface disturbance footprint of anthropogenic development, including energy and urban development, roads and railroads, cultivated croplands, surface mines and quarries, and energy transmission lines and pipelines. The index represents a gradient of anthropogenic influence as represented by development summarized at two spatial scales of analysis: 2.5 and 20 kilometers. We provide several example applications of the index, illustrating how these data may inform natural resource decisions at the spatial extent of BLM field and district offices, states, ecoregions, and the western United States. We find that 19.2 percent of lands managed by the BLM across the 17 western states of the conterminous United States had the highest landscape intactness. The largest intact areas occur on public lands at high elevations or in the Great Basin. We believe the frameworks, processes, and analyses provided in this report will improve the ability of the BLM to identify and evaluate potential direct and indirect effects of management actions (such as habitat restoration and renewable energy development), and assist the BLM in further implementing a landscape approach to resource management.

Open-File Report↗
USGS1974

Simulated effects of oil-shale development on the hydrology of Piceance basin, Colorado

The Piceance and Yellow Creeks drainage area is about 900 square miles (2,330 square kilometres) and is referred to as the Piceance basin, or simply as the basin. The surface-water and ground-water systems in the Piceance basin are intimately related. The annual volume of runoff from the basin (Piceance and Yellow Creeks) is estimated to be 15,650 acre-feet (19.2 cubic hectometres). About 80 percent of the annual runoff is supplied by ground-water discharge. Runoff from the basin is affected by irrigation diversions and consumptive use by crops, native vegetation, and evporation. Streamflow depletions resulting from irrigation are estimated to be 4,800 acre-feet (5.9 cubic hectometres) per year. In the absence of irrigation, the mean annual runoff from the basin would be 20,450 acre-feet (25.2 cubic hectometres). The period of lowest flow normally occurs during spring and summer when irrigation diversions are greatest. Peak flows from snowmelt and thunderstorms also occur during this period. A regional analysis, using the index-flood method, was made to estimate flood frequencies in the absence of irrigation diversions for the gaging stations Piceance Creek at White River and Yellow Creek near White River. The estimated mean annual floods are 800 cubic feet per second (22.7 cubic metres per second) for Piceance Creek and 390 cubic feet per second (11.0 cubic metres per second) for Yellow Creek. The peak flow observed during the 5 years of record on Piceance Creek at White River was 407 cubic feet per second (11.5 cubic metres per second) or about one-half the estimated mean annual flood. Yellow Creek is only slightly affected by irrigation diversions and the peak flow for the single year of record was 468 cubic feet per second (13.3 cubic metres per second). Irrigation return flows and ground-water discharge affect the quality of surface water in the Piceance basin. The concentration of dissolved solids ranges from less than 500 milligrams per litre in the upper reaches to more than 5,000 milligrams per litre in the lower reaches of Piceance Creek and from about 700 to 3,000 milligrams per litre in Yellow Creek. Water quality decreases in the downstream direction due to ground-water discharge from the Green River and Uinta Formations. The ground-water system in the basin consists of two principal aquifers separated by the Mahogany zone in the Green River Formation. Recharge to the aquifers occurs mainly from snowmelt along the basin margins above 7,000 feet (2,130 metres) altitude. Ground water flows from the basin margins toward the north-central part of the basin where it is discharged in Piceance and Yellow Creek valleys as evapotranspiration and streamflow. Recharge and discharge from the aquifer system are estimated to average 26,100 acre-feet (32.2 cubic hectometres) annually. About 20 percent of the recharge is discharged in Yellow Creek drainage. Estimates of the volume of water in storage in the aquifers range from 2.5 to 25 million acre-feet (3,100 to 31,000 cubic hectometres). Sodium minerals in the aquifer below the Mahogany zone are actively being dissolved by ground water. The Mahogany zone impedes the flow of water between the aquifers and large chemical differences have developed. Water in the upper aquifer generally has less than 2,000 millgrams per litre dissolved solids while that in the lower aquifer exceeds 30,000 milligrams per litre dissolved solids in the northern part of the basin. Digital models were used to simulate the hydrologic system. A watershed model was adapted to the drainage above the gage on Piceance Creek below Ryan Gulch to evaluate the possible effects of precipitation changes on the hydrologic system due to the introduction of atmospheric pollutants from oil-shale development or cloud seeding. A 10-percent decrease and 10- and 20-percent increases in the October to May precipitation were examined. It was found that each 10-percent change in precipitation results in a 40-percent change in ground-water recharge. The model study indicates that a 10-percent decrease in October-May precipitation results in a 30-percent decrease in mean annual runoff while 10-and 20-percent increases in precipitation result in 40- and 85 percent increases in mean annual runoff. A digital model of the ground-water system was used to evaluate the effects of mine dewatering on the hydrologic system. Hypothetical mines in oil-shale lease tracts C-a and C-b were considered. Both mines were assumed to be in the Mahogany zone and to be 4 square miles (5.2 square kilometres) in area. Dewatering of the mines was assumed to occur simultaneously for a period of 30 years. For the hypothetical dewatering scheme simulated, the model study indicates that the mine in tract C-a will not produce enough water to meet the demand for processing and disposal of oil shale while the mine in tract C-b will produce water in excess of the demand. The concentration of dissolved solids of the water discharged from the mines may not exceed 5,000 milligrams per litre for the hypothetical dewatering scheme considered. Dewatering the hypothetical mines will only slightly affect groundwater discharge in the Yellow Creek drainage. However, after 30 years of dewatering, the model indicates that ground-water discharge will cease in a 10-mile (16-kilometre) reach of Piceance Creek near tract C-b. The decrease in ground-water discharge in this reach could cause an increase in the concentration of dissolved solids in the downstream reach of Piceance Creek. After 30 years of dewatering, the hydraulic head in the aquifers is decreased in 75 percent of the basin area and about 500,000 acre-feet (620 cubic hectometres) of water are removed from storage in the aquifers. It is concluded that oil-shale development will have significant effects on the surface- and ground-waters systems in the Piceance basin.

Colorado↗
USGS1989

Physical, chemical, and biological data for selected streams in Chester County, Pennsylvania, 1969-80

This report presents physical, chemical, and biological data collected at 50 sampling sites on selected streams in Chester County, Pennsylvania from 1969 to 1980. The physical data consist of air and water temperature, stream discharge, suspended sediment, pH, specific conductance, and dissolved oxygen. The chemical data consist of laboratory determinations of total nutrients, major ions, and trace metals. The biological data consist of total coliform, fecal coliform, and fecal streptococcus bacteriological analyses, and benthicmacroinvertebrate population analyses. Brillouin's diversity index, maximum diversity, minimum diversity, and evenness for each sample, and median and mean Brilloiuin's diversity index, standard deviation, and standard error of the mean were calculated for the benthic-macroinvertebrate data for each site.

Pennsylvania↗
USGS1991

Review of water demand and water utilization studies for the Provo River drainage basin, and review of a study of the effects of the proposed Jordanelle Reservoir on seepage to underground mines, Bonneville unit of the central Utah project

Problem: Questions have been raised concerning the adequacy of available water to fulfill the needs of storage, exchanges, diversions, and instream flows, pursuant to existing water rights in the Provo River drainage basin part of the Bonneville Unit. Also, concern has been expressed about the potential for seepage of water from Jordanelle Reservoir to underground mines. The Utah Congressional Delegation requested that the U.S. Geological Survey (USGS) review the results of analyses performed by and for the USBR. Purpose and Scope: The purpose of this report is to present the results of the USGS review of (1) the hydrologic data, techniques, and model used by the USBR in their hydrologic analyses of the Provo River drainage basin and (2) the results of a study of the potential for seepage from the Jordanelle Reservoir to nearby underground mines. The USGS reviewed USBR-supplied water demands, water utilization studies, and models of seepage from Jordanelle Reservoir. The USBR estimated that about 90 percent of the water supply for Jordanelle Reservoir will be water from Strawberry Reservoir exchanged for water from the Provo River stored in Utah Lake. If the Utah State Engineer allows the USBR to claim an estimated 19,700 acre-feet of return flows from the CUP, only about 77 percent of the supply would be derived from exchange of existing water rights in Utah Lake. The USGS assumed that planned importations of water from the Uinta Basin will be available and deliverable to fulfill the proposed exchanges. Water rights and demands are important for determining water availability. The USGS did not conduct an independent review of water rights and demands. The USSR and Utah Division of Water Rights use different methods in some areas for determining stress on the system based on past records. The USSR used "historical observed diversions" and the Utah Division of Water Rights use "diversion entitlements", which may not be equal to the historical diversions. The USGS based its review upon water demands used by the USSR. The Utah Division of Water Rights has responsibility for granting and enforcing water rights, and the final decisions on how the rights will be adjudicated lies with the Utah Division of Water Rights and with the courts. The USGS review did not consider the draft water distribution plan for the Utah Lake drainage basin proposed by the Utah State Engineer (written commun., October 15,1991). This plan, when finalized, may have an effect on water availability to the CUP.

Utah↗
USGS2007

Simulation of Surface-Water Conditions in the Nontidal Passaic River Basin, New Jersey

The Passaic River Basin, the third largest drainage basin in New Jersey, encompasses 950 mi2 (square miles) in the highly urbanized area outside New York City, with a population of 2 million. Water quality in the basin is affected by many natural and anthropogenic factors. Nutrient loading to the Wanaque Reservoir in the northern part of the basin is of particular concern and is caused partly by the diversion of water at two downstream intakes that is transferred back upstream to refill the reservoir. The larger of these diversions, Wanaque South intake, is on the lower Pompton River near Two Bridges, New Jersey. To support the development of a Total Maximum Daily Load (TMDL) for nutrients in the nontidal part of the basin (805 mi2), a water-quality transport model was needed. The U.S. Geological Survey, in cooperation with the New Jersey Department of Environmental Protection and New Jersey EcoComplex, developed a flow-routing model to provide the hydraulic inputs to the water-quality model. The Diffusion Analogy Flow model (DAFLOW) described herein was designed for integration with the Water Quality Analysis Simulation Program (WASP) watershed water-quality model. The flow routing model was used to simulate flow in 108 miles of the Passaic River and major tributaries. Flow data from U.S. Geological Survey streamflow-gaging stations represent most of the model's upstream boundaries. Other model inputs include estimated flows for ungaged tributaries and unchanneled drainage along the mainstem, and reported flows for major point-source discharges and diversions. The former flows were calibrated using the drainage-area ratio method. The simulation extended over a 4+ year period representing a range in flow conditions. Simulated channel cross-sectional geometry in the DAFLOW model was calibrated using several different approaches by adjusting area and top width parameters. The model also was calibrated to observed flows for water year 2001 (low flow) at five mainstem gaging stations and one station at which flow was estimated. The model's target range was medium to low flows--the range of typical intake operations. Simulated flow mass balance, hydrographs (flood-wave speed, attenuation, and spread), flow-duration curves, and velocity and depth values were compared to observed counterparts. Mass balance and hydrograph fit were evaluated quantitatively. Simulation results generally were within the accuracy of the flow data at the measurement stations. The model was validated to observed flows for water years 2000 (average flow), 2002 (extreme low flow), and 2003 (high flow). Results for 19 of 20 comparisons indicate average mass-balance and model-fit errors of 6.6 and 15.7 percent, respectively, indicating that the model reasonably represents the time variation of streamflow in the nontidal Passaic River Basin. An algorithm (subroutine) also was developed for DAFLOW to simulate the hydraulic mixing that occurs near the Wanaque South intake upstream from the confluence of the Pompton and Passaic Rivers. The intake draws water from multiple sources, including effluent from a nearby wastewater-treatment plant, all of which have different phosphorus loads. The algorithm determines the proportion of flow from each source and operates within a narrow flow range. The equations used in the algorithm are based on the theory of diffusion and lateral mixing in rivers. Parameters used in the equations were estimated from limited available local flow and water-quality data. As expected, simulation results for water years 2000, 2001, and 2003 indicate that most of the water drawn to the intake comes from the Pompton River; however, during many short periods of low flow and high diversion, particularly in water year 2002, entrainment of the other flow sources compensated for the insufficient flow in the Pompton River. As additional verification of the flow model used in the water-quality model, a Branched Lagrangian Transport Model (B

Scientific Investigations Report↗
USGS2010

Hydrogeomorphic segments and hydraulic microhabitats of the Niobrara River, Nebraska— With special emphasis on the Niobrara National Scenic River

The Niobrara River is an ecologically and economically important resource in Nebraska. The Nebraska Department of Natural Resources’ recent designation of the hydraulically connected surface- and groundwater resources of the Niobrara River Basin as “fully appropriated” has emphasized the importance of understanding linkages between the physical and ecological dynamics of the Niobrara River so it can be sustainably managed. In cooperation with the Nebraska Game and Parks Commission, the U.S. Geological Survey investigated the hydrogeomorphic and hydraulic attributes of the Niobrara River in northern Nebraska. This report presents the results of an analysis of hydrogeomorphic segments and hydraulic microhabitats of the Niobrara River and its valley for the approximately 330-mile reach from Dunlap Diversion Dam to its confluence with the Missouri River. Two spatial scales were used to examine and quantify the hydrogeomorphic segments and hydraulic microhabitats of the Niobrara River: a basin scale and a reach scale. At the basin scale, digital spatial data and hydrologic data were analyzed to (1) test for differences between 36 previously determined longitudinal hydrogeomorphic segments; (2) quantitatively describe the hydrogeomorphic characteristics of the river and its valley; and (3) evaluate differences in hydraulic microhabitat over a range of flow regimes among three fluvial geomorphic provinces. The statistical analysis of hydrogeomorphic segments resulted in reclassification rates of 3 to 28 percent of the segments for the four descriptive geomorphic elements. The reassignment of classes by discriminant analysis resulted in a reduction from 36 to 25 total hydrogeomorphic segments because several adjoining segments shared the same ultimate class assignments. Virtually all of the segment mergers were in the Canyons and Restricted Bottoms (CRB) fluvial geomorphic province. The most frequent classes among hydrogeomorphic segments, and the dominant classes per unit length of river, are: a width-restricted valley confinement condition, sinuous-planview pattern, irregular channel width, and an alternate bar configuration. The Niobrara River in the study area flows through a diversity of fluvial geomorphic settings in its traverse across northern Nebraska. In the Meandering Bottoms (MB) fluvial geomorphic province, river discharge magnitudes are low, and the valley exerts little control on the channel-planview pattern. Within the CRB province, the river flows over a diversity of geologic formations, and the valley and river narrow and expand in approximate synchronicity. In the Braided Bottoms (BB) fluvial geomorphic province, the river primarily flows over Cretaceous Pierre Shale, the valley and channel are persistently wide, and the channel slope is generally uniform. The existence of vegetated islands and consequent multithread channel environments, indicated by a higher braided index, mostly coincided with reaches having gentler slopes and less unit stream power. Longitudinal hydrology curves indicate that the flow of the Niobrara River likely is dominated by groundwater as far downstream as Norden. Unit stream power values in the study area vary between 0 and almost 2 pounds per foot per second. Within the MB province, unit stream power steadily increases as the Niobrara gains discharge from groundwater inflow, and the channel slope steepens. The combination of steep slopes, a constrained channel width, and persistent flow within the CRB province results in unit stream power values that are between three and five times greater than those in less confined segments with comparable or greater discharges. With the exception of hydrogeomorphic segment 3, which is affected by Spencer Dam, unit stream power values in the BB province are generally uniform. Channel sinuosity values in the study area varied generally between 1 and 2.5, but with locally higher values measured in the MB province and at the entrenched bedrock meanders of hydrogeomorphic segment 18 in the CRB province. The differences in channel morphology and hydraulic geometries between fluvial geomorphic provinces are evident in the types, relative abundance, and response of hydraulic microhabitats to changing discharges. The four gaging stations chosen for hydraulic microhabitat analysis are distributed among three different fluvial geomorphic provinces. In the MB province, the smaller channel and lower discharges resulted in the dominance of shallow and intermediate-depth hydraulic environments with the vast majority of hydraulic microhabitat restricted to shallow categories even during upper-decile discharges. In the CRB province, intermediate depth hydraulic conditions, particularly intermediate-swift, dominate over all ranges of discharge. Hydraulic microhabitat conditions were most diverse in the BB province, with most hydraulic microhabitat categories present over the entire range of discharges analyzed. The calculated differences in hydraulic microhabitat distributions, abundance, and adjustments between streamflow-gaging stations were the result of differences in physical structure of the channel and subsequent channel hydraulic geometry. At the reach scale, field measurements made in water years 2008 and 2009 in four study reaches within the Scenic Reach were used to (1) characterize the elevation and geomorphic processes associated with fluvial landforms, (2) build hydraulic geometry relations, (3) examine flow hydraulics over a range of discharges, and (4) examine the types and responses of hydraulic microhabitats to a range of flow magnitudes. Four landform groups were identified and named in order of increasing elevation: low flood plains, intermediate flood plains, low terraces, and high terraces. The terraces were poorly characterized because the surveys did not extend across the full width of the alluvial valley bottom. The two lowest fluvial landforms are likely active in the modern hydroclimatic regime. Sediment samples obtained in the study reaches indicate that the primary bed material in the active channel ranged in size from coarse silt to coarse sand. Grain-size distributions from samples also indicate that the bed of the Niobrara River among the study reaches coarsens and has increasing grainsize variability in the downstream direction. Values of at-a-station hydraulic geometry exponents indicate that the Niobrara River in the study reaches adjusts its geometry to changing discharges primarily through increases in flow depth and velocity. Relations at one cross section indicated that, at least locally, changes in width were also an important channel adjustment mechanism. Hydraulic behavior over the range of flows measured was not consistent among all study reaches, but two general modes of hydraulic behavior were observed in the reaches with substantial coverage of the bed by fine sediment. At the Sunny Brook and Muleshoe study reaches, average boundary-shear stress remained approximately constant, and hydraulic resistance decreased, for discharges below 900 cubic feet per second (ft 3 /s). Above 900 ft 3 /s, average boundary shear stress and hydraulic resistance both increased. The Rock Barn study reach did not exhibit the same two-mode hydraulic behavior observed at the Sunny Brook and Muleshoe reaches. The coincident increase in boundary shear stress above 900 ft 3 /s observed at the Sunny Brook and Muleshoe study reaches represents a potential hydraulic threshold above which bedload transport rates were likely to increase markedly. No consistent bed-adjustment pattern (scour or fill) was identified in the study reaches over the range of flows or over the measurement season. Analysis of hydraulic microhabitats over the range of discharges measured at the study reaches indicates that some percentage of most habitat niche categories was available for at least one discharge condition, but the majority of hydraulic habitat available was within the intermediate-swift and deepswift habitat niche categories. Deep-swift conditions dominated nearly all study reaches under all measured discharge conditions. Slight differences in habitat distributions were observed between the study reaches with substantial coverage of the bed by fine sediment—Sunny Brook, Muleshoe, and Rock Barn—and the bedrock-dominated reach, Crooked Creek. Although the four study reaches occupy three different hydrogeomorphic segments, the types, relative abundance, and response of hydraulic microhabitat niche distributions to changing discharge conditions generally were similar among all reaches.

Nebraska↗
USGS2012

Spatial and seasonal variability of base flow in the Verde Valley, central Arizona, 2007 and 2011

Synoptic base-flow surveys were conducted on streams in the Verde Valley, central Arizona, in June 2007 and February 2011 by the U.S. Geological Survey (USGS), in cooperation with the Verde River Basin Partnership, the Town of Clarkdale, and Yavapai County. These surveys, also known as seepage runs, measured streamflow under base-flow conditions at many locations over a short period of time. Surveys were conducted on a segment of the Verde River that flows through the Verde Valley, between USGS streamflow-gaging stations 09504000 and 09506000, a distance of 51 river miles. Data from the surveys were used to investigate the dominant controls on Verde River base flow, spatial variability in gaining and losing reaches, and the effects that human alterations have on base flow in the surface-water system. The most prominent human alterations in the Verde Valley are dozens of surface-water diversions from streams, including gravity-fed ditch diversions along the Verde River.Base flow that entered the Verde River from the tributary streams of Oak Creek, Beaver Creek, and West Clear Creek was found to be a major source of base flow in the Verde River. Groundwater discharge directly into the Verde River near these three confluences also was an important contributor of base flow to the Verde River, particularly near the confluence with Beaver Creek. An examination of individual reaches of the Verde River in the Verde Valley found three reaches (largely unaffected by ditch diversions) exhibiting a similar pattern: a small net groundwater discharge in February 2011 (12 cubic feet per second or less) and a small net streamflow loss in June 2007 (11 cubic feet per second or less). Two reaches heavily affected by ditch diversions were difficult to interpret because of the large number of confounding human factors. Possible lower and upper bounds of net groundwater flux were calculated for all reaches, including those heavily affected by ditches.

Arizona↗
USGS2014

Low-flow characteristics of streams in the Lahaina District, West Maui, Hawai'i

The purpose of this study was to characterize streamflow availability under natural low-flow conditions for streams in the Lahaina District, west Maui, Hawaiʻi. The study-area streams included Honolua Stream and tributary Pāpua Gulch, Honokahua Stream and tributary Mokupeʻa Gulch, Kahana Stream, Honokōwai Stream and tributaries Amalu and Kapāloa Streams, Wahikuli Gulch and tributary Hāhākea Gulch, Kahoma Stream and tributary Kanahā Stream, Kauaʻula Stream, Launiupoko Stream, Olowalu Stream, and Ukumehame Gulch. The results of this study can be used to assist in the determination of technically defensible instream-flow standards for the study-area streams. Low-flow characteristics for natural (unregulated) streamflow conditions were represented by flow-duration discharges that are equaled or exceeded between 50 and 95 percent of the time. Partial-record sites were established on 10 main streams and 5 tributary streams, mainly upstream from existing surface-water diversions. Flow characteristics were determined using historical and current streamflow data from continuous-record streamflow-gaging stations and miscellaneous sites, and additional data collected as part of this study. Based on strategically scheduled observations, six of the study-area streams were ephemeral streams that were observed to remain dry at least 50 percent of the time: Pāpua Gulch, Honokahua Stream and its tributary Mokupeʻa Gulch, Kahana Stream, and Wahikuli Gulch and its tributary Hāhākea Gulch. For the remaining streams with measurable flow, Honolua, Honokōwai, Kahoma, Kanahā, Kauaʻula, Launiupoko, and Olowalu Streams, and Ukumehame Gulch, flow-duration discharges were computed for the 30-year base period (water years 1984–2013), using two record-augmentation techniques. The 95-percent flow-duration discharges ranged from 0 to 4.8 cubic feet per second (ft 3 /s). The 50-percent flow-duration discharges ranged from 0.47 to 9.5 ft 3 /s. This study also estimated the streamflow gains and losses downstream of surface-water diversions using seepage-run measurements. A majority of the streams lost flow downstream from diversions. Measured seepage-loss rates ranged between 0.045 and 1.6 ft3/s per mile of stream reach. Seepage gains mostly occurred upstream from diversions and the measured seepage-gain rates generally ranged between 0.75 and 5.1 ft3/s per mile of stream reach. Under natural-flow conditions, Honolua Stream is estimated to flow to the ocean less than 80 percent of the time and Honokōwai Stream is estimated to flow to the ocean less than 50 percent of the time. Kahoma Stream, Kauaʻula Stream, Olowalu Stream, and Ukumehame Gulch are estimated to flow to the ocean at least 95 percent of the time.

Hawai'i↗
USGS2017

An evaluation of the zooplankton community at the Sheboygan River Area of Concern and non-Area of Concern comparison sites in western Lake Michigan rivers and harbors in 2016

The Great Lakes Areas of Concern (AOCs) are considered to be the most severely degraded areas within the Great Lakes basin, as defined in the Great Lakes Water Quality Agreement and amendments. Among the 43 designated AOCs are four Lake Michigan AOCs in the State of Wisconsin. The smallest of these AOCs is the Sheboygan River AOC, which was designated as an AOC because of sediment contamination from polychlorinated biphenyl compounds (PCBs), polycyclic aromatic hydrocarbons (PAHs), volatile organic compounds (VOCs), and heavy metals. The Sheboygan River AOC has 9 of 14 possible Beneficial Use Impairments (BUIs), which must be addressed to improve overall water-quality, and to ultimately delist the AOC. One of the BUIs associated with this AOC is the “degradation of phytoplankton and zooplankton populations,” which can be removed from the list of impairments when it has been determined that zooplankton community composition and structure at the AOC do not differ significantly from communities at non-AOC comparison sites. In 2012 and 2014, the U.S. Geological Survey collected plankton (phytoplankton and zooplankton) community samples at the Sheboygan River AOC and selected non-AOC sites as part of a larger Great Lakes Restoration Initiative study evaluating both the benthos and plankton communities in all four of Wisconsin’s Lake Michigan AOCs. Although neither richness nor diversity of phytoplankton or zooplankton in the Sheboygan River AOC were found to differ significantly from the non-AOC sites in 2012, results from the 2014 data indicated that zooplankton diversity was significantly lower, and so rated as degraded, when compared to the Manitowoc and Kewaunee Rivers, two non-AOC sites of similar size, land use, and close geographic proximity. As a follow-up to the 2014 results, zooplankton samples were collected at the same locations in the AOC and non-AOC sites during three sampling trips in spring, summer, and fall 2016. An analysis of similarity indicated no significant difference between the zooplankton community composition and structure in the AOC and non-AOC sites. Zooplankton taxa richness in the AOC was rated as “not degraded” in 2016 because of significantly higher taxa richness values in samples collected from the Sheboygan River AOC, compared with the non-AOC sites as a group (that is, data pooled from both non-AOC sites). Zooplankton diversity in 2016, however, was characterized as “degraded” in the AOC on the basis of significantly lower (p<0.05) values in samples collected from the AOC compared with those collected from the non-AOC sites as a group. Annual variation in zooplankton community composition and structure at the Sheboygan River AOC was significantly different among all 3 years sampled, as indicated by an analysis of similarity test. Zooplankton richness was significantly higher in 2014 than in both 2012 and 2016, and diversity was significantly higher in 2012 than in both 2014 and 2016. Postremediation recovery can often be complicated by non-AOC-related stressors such as nutrients, invasive species, and extremes in flow, which could affect the recovery of zooplankton communities in the Sheboygan River AOC. The effect of the stressors on postremediation recovery underscores the importance of sampling multiple years when assessing the effectiveness of remediation activities. The results from this study will be used by the Wisconsin Department of Natural Resources and the U.S. Environmental Protection Agency to determine if restoration efforts have been effective in removing the plankton BUI and to monitor future conditions in the AOC.

Wisconsin↗
USGS2018

Postglacial eruptive history and geochemistry of Semisopochnoi volcano, western Aleutian Islands, Alaska

Semisopochnoi Island, located in the Rat Islands group of the western Aleutian Islands and Aleutian volcanic arc, is a roughly circular island composed of scattered volcanic vents, the prominent caldera of Semisopochnoi volcano, and older, ancestral volcanic rocks. The oldest rocks on the island are gently radially dipping lavas that are the remnants of a shield volcano and of Ragged Top, which is an eroded stratocone southeast of the current caldera. None of these oldest rocks have been dated, but they all are likely Pleistocene in age. Anvil Peak, to the caldera’s north, has the morphology of a young stratocone and is latest Pleistocene to early Holocene in age. The oldest recognized Holocene deposits are those of the caldera-forming eruption, which produced the 7- by 6-km caldera in the center of the island, left nonwelded ignimbrite in valleys below the edifice, and left welded ignimbrite high on its flanks. The caldera-forming eruption produced rocks showing a range of intermediate whole-rock compositions throughout the eruption sequence, although a majority of clasts analyzed form a fairly tight cluster on SiO 2 -variation diagrams at 62.9 to 63.4 weight percent SiO 2 . This clustering of compositions at about 63 weight percent SiO 2 includes black, dense, obsidian-like clasts, as well as tan, variably oxidized, highly inflated pumice clasts. The best estimate for the timing of the eruption is from a soil dated at 6,920±60 14 C years before present underlying a thin facies of the ignimbrite deposit on the island’s north coast. Shortly after the caldera-forming eruption, two scoria cones on the northwest flank of the volcano outside the caldera, Ringworm crater and Threequarter Cone, simultaneously erupted small volumes of andesite. The oldest intracaldera lavas, on the floor of the caldera, are andesitic to dacitic, but are mostly covered by younger lavas and tephras. These intracaldera lavas include the basaltic andesites of small Windy cone, as well as the more voluminous basaltic andesites of three-peaked Mount Cerberus, which takes up most of the west half of the caldera and has erupted lavas that flowed to the sea on the southwestern coast of the island. Apparently active at the same time as Mount Cerberus, extracaldera Sugarloaf Peak at the southern point of the island has exclusively erupted basalts. Its young satellite peak, Sugarloaf Head, has erupted morphologically young lavas and cinder cones and may be the source of the last historical eruption in 1987. Several tephra sections on the east half of the island record as many as 50 tephras, mostly from Mount Cerberus, Sugarloaf Peak, and Sugarloaf Head, over the past several thousand years. Eruptive products of Semisopochnoi Island show an overall compositional range of basalt to dacite, though basaltic andesite and andesite constitute the largest proportions of rock types. They are tholeiitic, low to medium K, and have geochemical characteristics typical of magmatic arcs. The earliest Pleistocene lavas are mostly basalts that show the greatest geochemical diversity, as illustrated by, for example, La N /Yb N ratios of 1.9 to 3.5, suggesting fluctuations in the magma source region over the hundreds of thousands of years recorded by these older lavas. The Holocene rocks, in contrast, follow arrays in compositional space that suggest crystallization differentiation from discrete, subtly different batches of magma under varying pressure and temperature conditions. Increasingly negative Eu anomalies and an only modestly increasing alumina saturation index value with differentiation suggest that plagioclase and mafic silicates (amphibole and pyroxene) were involved to varying degrees in fractional crystallization to produce Semisopochnoi’s magmatic diversity. The crystal-poor, andesitic magmas that erupted during caldera formation likely separated from a plagioclase-, amphibole-, and clinopyroxene-dominated crystal residue in the upper crust at less than 900 °C, possibly following a period of decreased magmatic flux. During the Holocene, basaltic Sugarloaf Peak appears to bypass any upper crustal magmatic storage region and erupt crystal-rich basalts. Recent seismic swarms and long-lived warm springs attest to ongoing magmatic activity. The Holocene eruptive record at Semisopochnoi volcano is one of diverse eruptive styles as well as frequent eruptions from multiple vents located within and outside the caldera. The number and diversity of postcaldera vents means that the sites of future eruptions cannot be predicted with certainty. Future eruptions of ash similar in magnitude to the VEI 3 or less eruptions recorded in the documented tephra deposits would pose a hazard to aircraft in the region.

Alaska↗
USGS2018

Characterizing variability in vertical profiles of streamwise velocity and implications for streamgaging practices in the Chicago Sanitary and Ship Canal near Lemont, Illinois, January 2014 to July 2017

A critical component of the Lake Michigan Diversion Accounting program, which oversees the diversion of Great Lakes water by the State of Illinois, is the U.S. Geological Survey streamgage on the Chicago Sanitary and Ship Canal near Lemont, Illinois. The long-term application of an up-looking acoustic Doppler current profiler at this streamgage allows the flows at this study site to be examined from a new perspective: one that is not possible with the horizontally oriented instruments typically used at the site. This report presents results from more than 3.5 years of continuous monitoring data from the up-looking acoustic Doppler current profiler deployed at the study site, which allowed variability in the vertical profile of streamwise velocity to be characterized over a wide range of highly unsteady flows. These data revealed seasonal, density-driven underflows correlated with a combination of environmental variables. Two new methods for computing discharge were developed using this instrument and were determined to be of sufficient quality for Lake Michigan Diversion Accounting purposes. Finally, the up-looking acoustic Doppler current profiler and a barge-detection camera allowed the effect of commercial tows on streamgaging at the site to be evaluated. The addition of the up-looking acoustic Doppler current profiler to the U.S. Geological Survey streamgage on the Chicago Sanitary and Ship Canal near Lemont, Illinois, has ensured the best current engineering practices and scientific knowledge are implemented in the Lake Michigan Diversion Accounting program in accordance with the U.S. Supreme Court decree of 1967, as amended in 1980.

Illinois↗
USGS1984

Water quality in the New River from Calexico to the Salton Sea, Imperial County, California

The New River enters the United States at Calexico, Calif., after it crosses the international boundary. Water-quality data from routine collection indicated that the New River was degraded by high organic and bacterial content. Intensive sampling for chemical and physical constituents and properties of the river was done May 9-13, 1977, to quantify the chemical composition of the water and to identify water-quality problems. Concentrations of total organic carbon in the New River at Calexico ranged from 80 to 161 milligrams per liter and dissolved organic carbon ranged from 34 to 42 milligrams per liter; the maximum chemical oxygen demand was 510 milligrams per liter. Intensive sampling for chemical and biological characteristics was done in the New River from May 1977 to June 1978 to determine the occurrence of the organic material and its effects on downstream water quality. Dissolved-oxygen concentration was measured along longitudinal profiles of the river from Calexico to the Salton Sea. A dissolved-oxygen sag downstream from the Calexico gage varied seasonally. The sag extended farther downstream and had lower concentrations of dissolved oxygen during the summer months than during the winter months. The sag of zero dissolved-oxygen concentration extended 26 miles in July 1977. In December 1976, the sag extended 20 miles but the minimum dissolved-oxygen concentration was 2.5 milligrams per liter. The greatest diel (24-hour) variation in dissolved-oxygen concentration occurred in the reach from the Calexico gage to Lyons Crossing, 8.8 miles downstream. High concentrations of organic material were detected as far as Highway 80, 19.5 miles downstream from the international boundary. Biological samples analyzed for benthic invertebrates showed that water at the Calexico and Lyons Crossing sites, nearest the international boundary, was of such poor quality that very few bottom-dwelling organisms could survive. Although the water was of poor quality at Keystone Road, 36 miles downstream, it was able to support a benthic community. The April sample had more than 9,150 organisms on a multiplate sampler, 8,770 of which were of one species. Farther downstream at the Westmorland gage, the water quality, as indicated by the number and diversity of organisms, had improved over that at the Keystone site. The Alamo River at its outlet to the Salton Sea--the control site--had the greatest diversity of all the study sites. This diversity, when compared with the diversity at the Westmorland gage, indicated that the effects of the degraded water quality observed at the New River at Calexico are detected as far as 62 miles downstream. Standard bacteria indicator tests indicate that fecal contamination exists in the New River. Counts of fecal coliform bacteria ranged from 180,000 to 2,800,000 colonies per 100 milliliters for the 20-mile reach from Calexico to Highway 80, and fecal streptococcal bacteria ranged from 5,000 to 240,000 colonies per 100 milliliters.

California↗
USGS2025

A practical framework for identifying genetic subpopulations and ESUs: Insights for IUCN assessments and broader management

The International Union for Conservation of Nature (IUCN) sets global conservation standards, including the Red List of Threatened Species and the Green Status of Species. Recent analyses showed that genetic diversity has not been effectively considered by IUCN species assessments, despite being fundamental to species’ fitness and adaptive potential. Incorporation of genetic diversity into IUCN assessments can support its successful long-term conservation. To enhance the preservation of genetic diversity, assessments should include genetically meaningful within-species units. Subpopulations are recognized units by the IUCN for protecting natural connectivity, however infrequently evaluated. Evolutionarily Significant Units (ESUs) are currently not recognized as a formal unit by the IUCN. However, incorporating ESUs into conservation frameworks could significantly enhance our capacity to identify and protect adaptive genetic diversity. To facilitate inclusion of these units in IUCN assessments, we outline a widely applicable framework for their identification that uses non-molecular and molecular data for global accessibility.

EcoEvoRxiv↗
USGS2003

Two distinct phylogenetic clades of infectious hematopoietic necrosis virus overlap within the Columbia River basin

Infectious hematopoietic necrosis virus (IHNV), an aquatic rhabdovirus, causes a highly lethal disease of salmonid fish in North America. To evaluate the genetic diversity of IHNV from throughout the Columbia River basin, excluding the Hagerman Valley, Idaho, the sequences of a 303 nt region of the glycoprotein gene (mid-G) of 120 virus isolates were determined. Sequence comparisons revealed 30 different sequence types, with a maximum nucleotide diversity of 7.3% (22 mismatches) and an intrapopulational nucleotide diversity of 0.018. This indicates that the genetic diversity of IHNV within the Columbia River basin is 3-fold higher than in Alaska, but 2-fold lower than in the Hagerman Valley, Idaho. Phylogenetic analyses separated the Columbia River basin IHNV isolates into 2 major clades, designated U and M. The 2 clades geographically overlapped within the lower Columbia River basin and in the lower Snake River and tributaries, while the upper Columbia River basin had only U clade and the upper Snake River basin had only M clade virus types. These results suggest that there are co-circulating lineages of IHNV present within specific areas of the Columbia River basin. The epidemiological significance of these findings provided insight into viral traffic patterns exhibited by IHNV in the Columbia River basin, with specific relevance to how the Columbia River basin IHNV types were related to those in the Hagerman Valley. These analyses indicate that there have likely been 2 historical events in which Hagerman Valley IHNV types were introduced and became established in the lower Columbia River basin. However, the data also clearly indicates that the Hagerman Valley is not a continuous source of waterborne virus infecting salmonid stocks downstream.

Diseases of Aquatic Organisms↗
USGS2020

Genetic and environmental indicators of climate change vulnerability for desert bighorn sheep

Assessments of organisms’ vulnerability to potential climatic shifts are increasingly common. Such assessments are often conducted at the species level and focused primarily on the magnitude of anticipated climate change (i.e., climate exposure). However, wildlife management would benefit from population-level assessments that also incorporate measures of local or regional potential for organismal adaptation to change. Estimates of genetic diversity, gene flow, and landscape connectivity can address this need and complement climate exposure estimates to establish management priorities at broad to local scales. We provide an example of this holistic approach for desert bighorn sheep ( Ovis canadensis nelsoni ) within and surrounding lands administered by the U.S. National Park Service. We used genetic and environmental data from 62 populations across the southwestern U.S. to delineate genetic structure, evaluate relationships between genetic diversity and isolation, and estimate relative climate vulnerability for populations as a function of five variables associated with species’ responses to climate change: genetic diversity, genetic isolation, geographic isolation, forward climate velocity within a population’s habitat patch (a measure of geographic movement rate required for an organism to maintain constant climate conditions), and maximum elevation within the habitat patch (a measure of current climate stress, as lower maximum elevation is associated with higher temperature, lower precipitation, and lower population persistence). Genetic structure analyses revealed a high-level division between populations in southeastern Utah and populations in the remainder of the study area, which were further differentiated into four lower-level genetic clusters. Genetic diversity decreased with population isolation, whereas genetic differentiation increased, but these patterns were stronger for native populations than for translocated populations. Populations exhibited large variation in predicted vulnerability across the study area with respect to all variables, but native populations occupying relatively intact landscapes, such as Death Valley and Grand Canyon national parks, had the lowest overall vulnerability. These results provide local and regional context for conservation and management decisions regarding bighorn populations in a changing climate. Our study further demonstrates how assessments combining multiple factors could allow a more integrated response, such as increasing efforts to maintain connectivity and thus potential for adaptation in areas experiencing rapid climate change.

Arizona, California, Nevada, Utah↗
USGS2023

DNA virome composition of two sympatric wild felids, bobcat (Lynx rufus) and puma (Puma concolor) in Sonora, Mexico

With viruses often having devastating effects on wildlife population fitness and wild mammals serving as pathogen reservoirs for potentially zoonotic diseases, determining the viral diversity present in wild mammals is both a conservation and One Health priority. Additionally, transmission from more abundant hosts could increase the extinction risk of threatened sympatric species. We leveraged an existing circular DNA enriched metagenomic dataset generated from bobcat ( Lynx rufus , n = 9) and puma ( Puma concolor , n = 13) scat samples non-invasively collected from Sonora, Mexico, to characterize fecal DNA viromes of each species and determine the extent that viruses are shared between them. Using the metaWRAP pipeline to co-assemble viral genomes for comparative metagenomic analysis, we observed diverse circular DNA viruses in both species, including circoviruses, genomoviruses, and anelloviruses. We found that differences in DNA virome composition were partly attributed to host species, although there was overlap between viruses in bobcats and pumas. Pumas exhibited greater levels of alpha diversity, possibly due to bioaccumulation of pathogens in apex predators. Shared viral taxa may reflect dietary overlap, shared environmental resources, or transmission through host interactions, although we cannot rule out species-specific host-virus coevolution for the taxa detected through co-assembly. However, our detection of integrated feline foamy virus (FFV) suggests Sonoran pumas may interact with domestic cats. Our results contribute to the growing baseline knowledge of wild felid viral diversity. Future research including samples from additional sources (e.g., prey items, tissues) may help to clarify host associations and determine the pathogenicity of detected viruses.

Sonora↗
USGS2024

Benthic macroinvertebrate response to estuarine emergent marsh restoration across a delta-wide environmental gradient

Benthic invertebrates play vital roles in estuarine ecosystems, but like other taxa they have been excluded from former marshlands by diking and land use conversion. Dike removal is one way of restoring marsh, but the response of benthic invertebrates has been little studied. Also understudied is variation in benthic invertebrate communities across entire deltas, particularly in the Pacific Northwest of North America where deltas receive high flows and sediment loads for their size. Our goals were to evaluate invertebrate response to large-scale dike removal on the Nisqually River Delta in Puget Sound, Washington, U.S.A., characterize delta-wide invertebrate community variation, and relate invertebrate response and spatial variation to environmental conditions. We sampled invertebrates annually from one year before to three years after dike removal in restoring marsh, previously restored marsh, undisturbed reference marsh, and adjacent tidal flats. Marine taxa immediately colonized the area recently restored to tidal inundation and population size grew exponentially thereafter for several of them. Community composition and diversity recovered completely, and density and biomass were approaching recovery three years later. Invertebrate communities converged between restoring and pre-existing marsh (previously restored and reference), suggesting an influence of reestablished connectivity. Just offshore from the dike line, invertebrates declined one year after dike removal but then rebounded indicating resilience to short-term disturbance. Dike removal effects were not detected farther offshore. Near the offshore edge of the delta, invertebrate biomass and body size were greater than elsewhere and a diverse assemblage of crustaceans, polychaetes, and bivalves was present. Farther inshore, tidal flats were dominated by a few species of small-bodied polychaetes and had higher density but lower biomass and diversity. Facultative detritivores, which can also filter feed, were the dominant feeding guild everywhere on the tidal flats. Density, biomass, diversity, and community composition on the marsh were more similar to the inner than outer tidal flats. Environmental variables most associated with invertebrate community variation were elevation, salinity, and sediment grain size and organic content. Our results are relevant to assessing performance and setting expectations for future restorations and have broad implications for the role of benthic invertebrates in estuarine ecosystems.

Washington↗
USGS2021

Novel insights into the genetic population connectivity of transient whale sharks (Rhincodon typus) in Pacific Panama provide crucial data for conservation efforts

The whale shark ( Rhincodon typus ) is an endangered and highly migratory species, of which solitary individuals or aggregations are observed in oceans worldwide and for which conservation efforts are hindered by a lack of comprehensive data on genetic population connectivity. Tissue samples were collected from wandering whale sharks in Pacific Panama to determine genetic diversity, phylogeographic origin, and possible global and local connectivity patterns using a 700–800 bp fragment of the mitochondrial control region gene. Genetic diversity among samples was high, with five new haplotypes and nine polymorphic sites identified among the 15 sequences. Haplotype diversity ( H d = 0.83) and nucleotide diversity (π = 0.00516) were similar to those reported in other studies. Our sequences, in particular haplotypes PTY1 and PTY2 , were similar to those previously reported in the Arabian Gulf and the Western Indian Ocean populations (a novel occurrence in the latter case). Haplotypes PTY3 , PTY4 , and PTY5 were similar to populations in Mexico and the Gulf of California. In contrast, the only populations to which our Panamanian sequences were genetically dissimilar were those from the Atlantic Ocean. The absence of reference sequences in GenBank from southern sites in the Eastern Tropical Pacific, such as Galapagos (Ecuador), Gorgona and Malpelo Islands (Colombia), and Coco Island (Costa Rica), reduced our capacity to genetically define regional patterns. Genetic differentiation and connectivity were also assessed using an analysis of molecular variance (AMOVA), which showed a similar population structure (five groups) to the neighbor-joining tree. Other population features based on neutrality tests, such as Tajima’s D and Fu’s Fs statistics, showed positive values for Panama of 0.79 and 1.61, respectively. Positive values of these statistics indicate a lack of evidence for population expansion among the sampled individuals. Our results agree with previous reports suggesting that whale sharks can travel over long distances and that transboundary conservation measures may be effective for species protection.

Gulf of Chiriqu↗