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At least 955 records · Page 53Linked to original sources
USGS2024

Streamflow characteristics and trends in New Jersey, water years 1903–2017

As New Jersey’s population density remains high, so does its requirements for water management. Understanding the streamflow conditions throughout the state and how they may have changed over time is an important part of managing the water resources within the state. The New Jersey Department of Environmental Protection has many responsibilities related to protecting the environment and natural resources and among them is protecting the waters in the lakes, rivers, and streams of New Jersey for current and future use. To support this mission, the U.S. Geological Survey updated high- and low-streamflow statistics for 97 continuous-record streamgages and low-streamflow statistics for 719 partial-record streamgages throughout the state. The continuous-record streamgages included in the study had a minimum of 20 years of record, spanning from 1903 to 2017. This study is an update to previous studies that documented the high- and low-streamflow statistics for New Jersey streams in the 1970s and in 2005. The 1982 report by Gillespie and Schopp documented low-flow characteristics and flow duration for about 400 continuous and partial-record streamgages. The U.S. Geological Survey computed streamflow statistics including, but not limited to, maximum, minimum, and means for period of record, flow durations, nonexceedance high- and low-flow frequencies, base flow, runoff, peak-to-mean flow ratios, and September median streamflow. Overall, both high and low flows are generally increasing in New Jersey, though the results are not uniform across the State. Streamflow trends and changes to duration and frequency statistics can be influenced by local water use, in addition to climate variables. The resulting computations at some streamgages indicated considerable positive change while others showed considerable negative change. Water managers and regulators can use the data provided here and in the companion data release to assess individual stream reaches and watershed management areas to evaluate the available resources and changes, which may have developed during the periods for which streamflow statistics are available.

New Jersey↗
USGS1986

Seed germination patterns of Salvia mellifera in fire-prone environments

Salvia mellifera seeds from coastal sage, chaparral and desert scrub in southern California failed to germinate in the dark unless exposed to powdered charred wood. This pattern was observed for seeds given a one month stratification at 5 C and for ones not stratified and also for seeds incubated under continuous 23 C or a diurnal alternation of 13 C/23 C. Dark inhibition of germination was also overcome, but only in seeds from chaparral populations, if seeds were incubated on commercial potting soil under alternating 13 C/23 C. Seeds in the light germinated readily in all but one population from desert scrub vegetation. Germination of seeds from this population was markedly stimulated by dry heating of the seeds at either 70 C for 5 h or 115 C for 5 min. For all populations there were numerous significant interactions between incubation temperature, pre-chilling stratification, light, and heating/charred wood treatments. Timing of germination was remarkably consistent between populations; the vast majority of seeds germinated within the first week at 23 C (or 13 C/23 C) regardless of whether or not they had received a pre-chilling treatment.

Oecologia↗
USGS2021

Environmental conditions associated with occurrences of the threatened Yaqui Catfish in the Yaqui River Basin, Mexico

The Yaqui Catfish Ictalurus pricei is an understudied species, with limited information available on its ecology, distribution, and local habitat use. Native to the southwestern United States and northwestern Mexico, Yaqui Catfish populations are declining, which has prompted listing of the species as threatened in the United States and as a species of concern in Mexico. Water overallocation, habitat degradation, invasive species introductions, and hybridization with nonnative Channel Catfish I . punctatus have caused the populations in Mexico to decline. The United States population collapsed after years of low recruitment. To better focus conservation efforts as well as define habitat associated with Yaqui Catfish occurrences, we assessed the distribution in the Yaqui River basin of Mexico by using historical data at a landscape scale. Yaqui Catfish were historically found across the watershed among a diversity of environments but were most frequently associated with small, intermittent streams. Basin land cover was dominated by forest, shrubland, and grassland, and Yaqui Catfish generally occurred in stream segments at similar proportions. However, a small number of Yaqui Catfish occurrences were associated with urban and cropland land cover types in proportions greater than the availability of those categories on the landscape. With the species facing declines in the region, this work will help to inform future conservation efforts aimed at securing the Yaqui Catfish, protecting suitable habitat, and better defining its current status in Mexico.

Yaqui River Basin↗
USGS2015

Functional age as an indicator of reservoir senescence

It has been conjectured that reservoirs differ in the rate at which they manifest senescence, but no attempt has been made to find an indicator of senescence that performs better than chronological age. We assembled an indicator of functional age by creating a multimetric scale consisting of 10 metrics descriptive of reservoir environments that were expected to change directionally with reservoir senescence. In a sample of 1,022 U.S. reservoirs, chronological age was not correlated with functional age. Functional age was directly related to percentage of cultivated land in the catchment and inversely related to reservoir depth. Moreover, aspects of reservoir fishing quality and fish population characteristics were related to functional age. A multimetric scale to indicate reservoir functional age presents the possibility for management intervention from multiple angles. If a reservoir is functionally aging at an accelerated rate, action may be taken to remedy the conditions contributing most to functional age. Intervention to reduce scores of selected metrics in the scale can potentially reduce the rate of senescence and increase the life expectancy of the reservoir. This leads to the intriguing implication that steps can be taken to reduce functional age and actually make the reservoir grow younger.

Fisheries↗
USGS2012

Changing Arctic ecosystems--research to understand and project changes in marine and terrestrial ecosystems of the Arctic

Ecosystems and their wildlife communities are not static; they change and evolve over time due to numerous intrinsic and extrinsic factors. A period of rapid change is occurring in the Arctic for which our current understanding of potential ecosystem and wildlife responses is limited. Changes to the physical environment include warming temperatures, diminishing sea ice, increasing coastal erosion, deteriorating permafrost, and changing water regimes. These changes influence biological communities and the ways in which human communities interact with them. Through the new initiative Changing Arctic Ecosystems (CAE) the U.S. Geological Survey (USGS) strives to (1) understand the potential suite of wildlife population responses to these physical changes to inform key resource management decisions such as those related to the Endangered Species Act, and (2) provide unique insights into how Arctic ecosystems are responding under new stressors. Our studies examine how and why changes in the ice-dominated ecosystems of the Arctic are affecting wildlife and will provide a better foundation for understanding the degree and manner in which wildlife species respond and adapt to rapid environmental change. Changes to Arctic ecosystems will be felt broadly because the Arctic is a production zone for hundreds of species that migrate south for the winter. The CAE initiative includes three major research themes that span Arctic ice-dominated ecosystems and that are structured to identify and understand the linkages between physical processes, ecosystems, and wildlife populations. The USGS is applying knowledge-based modeling structures such as Bayesian Networks to integrate the work.

Arctic↗
USGS2004

Total mercury and methylmercury in fish fillets, water, and bed sediments from selected streams in the Delaware River basin, New Jersey, New York, and Pennsylvania, 1998-2001

Within the Delaware River Basin, fish-tissue samples were analyzed for total mercury (tHg). Water and bed-sediment samples were analyzed for tHg and methylmercury (MeHg), and methylation efficiencies were calculated. This study was part of a National Mercury Pilot Program conducted by the U.S. Geological Survey (USGS). The Delaware River Basin was chosen because it is part of the USGS National Water-Quality Assessment Program that integrates physical, chemical, and biological sampling efforts to determine status and trends in surface-water and ground-water resources. Of the 35 sites in the study, 31 were sampled for fish. The species sampled at these sites include smallmouth bass (Micropterus dolomieu), the target species, and where smallmouth bass could not be collected, brown trout (Salmo trutta), chain pickerel (Esox niger), largemouth bass (Micropterus salmoides), and rock bass (Ambloplites rupestris). There were a total of 32 fish samples; 7 of these exceeded the 0.3 microgram per gram wet-weight mercury (Hg) concentration set for human health by the U.S. Environmental Protection Agency and 27 of these exceeded the U.S. Fish and Wildlife Service criteria of 0.1 microgram per gram wet weight for the protection of fish-eating birds and wildlife. Basinwide analysis of Hg in fish, water, and bed sediment showed tHg concentration in fillets correlated positively with population density, urban land cover, and impervious land surface. Negative correlations included wetland land cover, septic density, elevation, and latitude. Smallmouth bass from the urban sites had a higher median concentration of tHg than fish from agricultural, low intensity-agricultural, or forested sites. Concentrations of tHg and MeHg in water were higher in samples from the more urbanized areas of the basin and were positively correlated with urbanization and negatively correlated with forested land cover. Methylation efficiency of water was negatively correlated with urbanization. Bed-sediment patterns were similar to those observed in water. Concentrations of tHg were higher in samples from the urbanized areas. In the more forested areas, MeHg concentrations were higher than in other land-use areas. Concentrations of tHg in bed sediment were positively correlated with urbanization factors (population, urban land cover, and impervious land surface) and negatively correlated with forested land cover and elevation. Forested land cover and latitude were positively correlated with concentrations of MeHg. The methylation efficiency was higher in samples from the forested areas and was negatively correlated with urbanization. Analyses within land-use groups showed that tHg concentrations in fish fillets from the urban sites were positively correlated with forested land cover and wetland cover. Urbanization factors within the agricultural group were positively correlated with tHg in fish; concentrations of tHg in fish from sites in the low intensity-agricultural group were negatively correlated with urbanization factors. Within the agricultural land-use group, tHg concentrations in water were negatively correlated with septic density, and MeHg concentrations were negatively correlated with elevation. In the forested and low intensity-agricultural groups, MeHg in water was negatively correlated with forested and agricultural land cover. Methylation efficiency in water also was negatively correlated with forested land cover but positively correlated with agricultural land cover. Bed-sediment concentrations of tHg in the forested and low-agricultural groups were positively correlated with agricultural land cover and negatively correlated with forested land cover. Concentrations of MeHg in bed sediment were positively correlated with septic density and drainage area and negatively correlated with forested land cover. Methylation efficiency was negatively correlated with population density, agricultural land cover, and sulfate concentrations in water. An urbanization effect was observed in all three media—fish, water, and bed sediment. Different factors, basinwide and within land-use groups, showed a complex relation. Additional sampling within these land-use groups could help characterize interrelations of Hg in the environment to fish in the Delaware River Basin.

New Jersey, New York, Pennsylvania↗
USGS2018

Migration trends for king and common eiders and yellow-billed loons past Point Barrow in a rapidly changing environment

Most of the king ( Somateria spectabilis ) and common eiders ( S. mollissima v-nigra ) nesting in northern Alaska and northwestern Canada migrate past Point Barrow, Alaska, during the spring and fall migration. Yellow-billed loons ( Gavia adamsii ) also migrate past Point Barrow and are a species of international conservation concern. Spring migration counts of eiders have been conducted approximately every ten years at Point Barrow since 1976, and indicated that both eider species experienced population declines of approximately 50% between 1976 and 1996, and that the declines had stabilized by 2004. Population estimates derived from migration counts have not been previously estimated for yellow-billed loons. We conducted spring counts of eiders and loons in 2015 and 2016 to obtain population estimates to compare with those from 1994, 1995, 2003, and 2004 in order to evaluate long-term and current trends. We estimated (95% confidence intervals) that 796,419 (304,011) king and 96,775 (39,913) common eiders passed Point Barrow in 2015, and 322,381 (145,833) king and 130,390 (34,548) common eiders passed Point Barrow in 2016. Both and king and common eider population estimates increased from 1994 through 2016, however, the increase over time was not significant (F < 5.07, P > 0.087, df = 1). Our population estimates for king eiders were very different between the two years of this study, possibly due to a very short and intense migration peak in 2016, resulting in a population count that was biased low because sampling periods did not adequately capture the peak of migration. The numbers of common eiders were similar between the two years, as well as for the 12 years since the previous count. Photo analysis of flocks indicated that observer counts were on average 4% lower than photo counts (paired t-test; |t| = 3.26, df = 297, P < 0.001) for flocks less than 1400 individuals (observer count). Estimates of yellow-billed loon populations were very variable and are biased low as numbers of loons passing Pt. Barrow were still high when our counts ended in late May. It is important that counts continue to be conducted for these species of conservation and subsistence importance, but that techniques be refined to reduce bias and variability, and to find solutions to the increasing difficulty of conducting a count from the shore-fast ice in spring.

Alaska↗
USGS2025

Nest location and pheromone concentrations interact to influence female nest choice in sea lamprey

Animal communication is dynamic; factors such as signal attributes, signaller and receiver positioning, and environment can interactively influence information exchange. However, most research has focused on the signals and preferences while neglecting the broader context in which they function. Using sea lamprey, Petromyzon marinus , we studied the effects of male signalling location on female nest choice. Male sea lamprey aggregate on spawning grounds in rivers where they build nests and release a sex pheromone to attract females. In controlled studies, females select nests with the highest relative concentration of pheromone, indicating some degree of mate choice following pheromone concentrations. In reality, however, the characteristics of pheromone signals detected by females (e.g. concentration) are shaped not only by the odour males emit but how they are transmitted downstream via river currents. We hypothesized that the effects of pheromone preferences on female nest choice also depend on the location of male nests. To test our hypothesis, we first surveyed the spatial distribution and use frequency of spawning nests in a wild population of sea lamprey. We then conducted instream behavioural assays using paired nest sites at two experimental locations and found that nest location and pheromone concentration impacted female nest choice. These behavioural results, along with indirect evidence for differences in pheromone plume dispersal at each site, suggest that signalling location and pheromone concentration may influence mate choice in sea lamprey. Although additional environmental factors likely influence natural mating decisions, our results highlight the importance of considering both signal attributes and the surrounding environment when studying communication networks.

Animal Behaviour↗
USGS1991

The Detroit River: Effects of contaminants and human activities on aquatic plants and animals and their habitats

Despite the extensive urbanization of its watershed, the Detroit River still supports diverse fish and wildlife populations. Conflicting uses of the river for waste disposal, water withdrawals, shipping, recreation, and fishing require innovative management. Chemicals added by man to the Detroit River have adversely affected the health and habitats of the river's plants and animals. In 1985, as part of an Upper Great Lakes Connecting Channels Study sponsored by Environment Canada and the U.S. Environmental Protection Agency, researchers exposed healthy bacteria, plankton, benthic macroinvertebrates, fish, and birds to Detroit River sediments and sediment porewater. Negative impacts included genetic mutations in bacteria; death of macroinvertebrates; accumulation of contaminants in insects, clams, fish, and ducks; and tumor formation in fish. Field surveys showed areas of the river bottom that were otherwise suitable for habitation by a variety of plants and animals were contaminated with chlorinated hydrocarbons and heavy metals and occupied only by pollution-tolerant worms. Destruction of shoreline wetlands and disposal of sewage and toxic substances in the Detroit River have reduced habitat and conflict with basic biological processes, including the sustained production of fish and wildlife. Current regulations do not adequately control pollution loadings. However, remedial actions are being formulated by the U.S. and Canada to restore degraded benthic habitats and eliminate discharges of toxic contaminants into the Detroit River.

Hydrobiologia↗
USGS2014

Potential environmental effects of pack stock on meadow ecosystems of the Sierra Nevada, USA

Pack and saddle stock, including, but not limited to domesticated horses, mules, and burros, are used to support commercial, private and administrative activities in the Sierra Nevada. The use of pack stock has become a contentious and litigious issue for land management agencies in the region inter alia due to concerns over effects on the environment. The potential environmental effects of pack stock on Sierra Nevada meadow ecosystems are reviewed and it is concluded that the use of pack stock has the potential to influence the following: (1) water nutrient dynamics, sedimentation, temperature, and microbial pathogen content; (2) soil chemistry, nutrient cycling, soil compaction and hydrology; (3) plant individuals, populations and community dynamics, non-native invasive species, and encroachment of woody species; and (4) wildlife individuals, populations and communities. It is considered from currently available information that management objectives of pack stock should include the following: minimise bare ground, maximise plant cover, maintain species composition of native plants, minimise trampling, especially on wet soils and stream banks, and minimise direct urination and defecation by pack stock into water. However, incomplete documentation of patterns of pack stock use and limited past research limits current understanding of the effects of pack stock, especially their effects on water, soils and wildlife. To improve management of pack stock in this region, research is needed on linking measurable monitoring variables (e.g. plant cover) with environmental relevancy (e.g. soil erosion processes, wildlife habitat use), and identifying specific environmental thresholds of degradation along gradients of pack stock use in Sierra Nevada meadows.

Rangeland Journal↗
USGS2023

Accounting for spatiotemporal sampling variation in joint species distribution models

Estimating relative abundance is critical for informing conservation and management efforts and for making inferences about the effects of environmental change on populations. Freshwater fisheries span large geographic regions, occupy diverse habitats and consist of varying species assemblages. Monitoring schemes used to sample these diverse populations often result in populations being sampled at different times and under different environmental conditions. Varying sampling conditions can bias estimates of abundance when compared across time, location and species, and properly accounting for these biases is critical for making inferences. We develop a joint species distribution model (JSDM) that accounts for varying sampling conditions due to the environment and time of sampling when estimating relative abundance. The novelty of our JSDM is that we explicitly model sampling effort as the product of known quantities based on time and gear type and an unknown functional relationship to capture seasonal variation in species life history. We use the model to study relative abundance of six freshwater fish species across the state of Minnesota, USA. Our model enables estimates of relative abundance to be compared both within and across species and lakes, and captures the inconsistent sampling present in the data. We discuss how gear type, water temperature and day of the year impact catchability for each species at the lake level and throughout a year. We compare our estimates of relative abundance to those obtained from a model that assumes constant catchability to highlight important differences within and across lakes and species. Synthesis and applications : Our method illustrates that assumptions relating indices of abundance to observed catch data can greatly impact model inferences derived from JSDMs. Specifically, not accounting for varying sampling conditions can bias inference of relative abundance, restricting our ability to detect responses to management interventions and environmental change. While our focus is on freshwater fisheries, this model architecture can be adopted to other systems where catchability may vary as a function of space, time and species.

Journal of Applied Ecology↗
USGS2017

High altitude flights by ruddy shelduck Tadorna ferruginea during trans-Himalayan migrations

Birds that migrate across high altitude mountain ranges are faced with the challenge of maintaining vigorous exercise in environments with limited oxygen. Ruddy shelducks are known to use wintering grounds south of the Tibetan Plateau at sea level and breeding grounds north of Himalayan mountain range. Therefore, it is likely these shelducks are preforming high altitude migrations. In this study we analyse satellite telemetry data collected from 15 ruddy shelduck from two populations wintering south of the Tibetan Plateau from 2007 to 2011. During north and south migrations ruddy shelduck travelled 1481 km (range 548–2671 km) and 1238 km (range 548–2689 km) respectively. We find mean maximum altitudes of birds in flight reached 5590 m (range of means 4755–6800 m) and mean maximum climb rates of 0.45 m s –1 (range 0.23–0.74 m s –1 ). The ruddy shelduck is therefore an extreme high altitude migrant that has likely evolved a range of physiological adaptations in order to complete their migrations.

Journal of Avian Biology↗
USGS1994

[Book review] The Ancient Murrelet. A natural history in the Queen Charlotte Islands

Leadership in ecological research on north-temperate-zone seabirds has long been associated with the region of the northeastern Atlantic, which enjoys a tradition of detailed, innovative work spanning several decades. Although the temperate North Pacific is home to several of the same species that figure prominently in the Atlantic and also has a host of interesting species found nowhere else, Pacific birds had until recently received comparatively little attention. Few important advances in seabird biology had come from the northern North Pacific, which tended to leave those of us who work in the region harboring a slight inferiority complex. Happily, this situation is beginning to change. First, we are learning that in some instances the population dynamics of shared species differ greatly between the North Pacific and North Atlantic. The Pacific work, therefore, is more than just a rehash of that which was already known. It takes an important step toward understanding geographic variation in demography – variation that would not have been anticipated from any casual comparison of the environments, which appear superficially similar. Second, we are starting to see the results of in-depth work on species unique to the region. Tony Gaston’s book, the first monographic treatment of any North Pacific alcid, is one encouraging sign that seabird research in the temperate North Pacific is coming of age.

The Auk↗
USGS1999

Cruise report; RV Coastal Surveyor Cruise C1-99; multibeam mapping of the Long Beach, California continental shelf; April 12 through May 19, 1999

The greater Los Angeles area of California is home to more than 10 million people. This large population puts increased pressure on the adjacent offshore continental shelf and margin with activities such as ocean disposal for dredged spoils, explosive disposal, waste-water outfall, and commercial fishing. The increased utilization of the shelf and margin in this area has generated accelerated multi-disciplinary research efforts in all aspects of the environment of the coastal zone. Prior to 1996 there were no highly accurate base maps of the continental shelf and slope upon which the research activities could be located and monitored. In 1996, the United States Geological Survey (USGS) Pacific Seafloor Mapping Project began to address this problem by mapping the Santa Monica shelf and margin (Fig. 1) using a state-of-the-art, high-resolution multibeam sonar system (Gardner, et al., 1996; 1999). Additional seafloor mapping in 1998 provided coverage of the continental margin from south of Newport to the proximal San Pedro Basin northwest of Palos Verdes Peninsula (Gardner, et al., 1998) (Fig. 1). The mapping of the seafloor in the greater Los Angeles continental shelf and margin was completed with a 30-day mapping of the Long Beach shelf in April and May 1999, the subject of this report. The objective of Cruise C-1-99-SC was to completely map the broad continental shelf from the eastern end of the Palos Verdes Peninsula to the narrow shelf south of Newport Beach, from the break in slope at about 120-m isobath to the inner shelf at about the 10-m isobath. Mapping the Long Beach shelf was jointly funded by the U.S. Geological Survey and the County of Orange (CA) Sanitation District and was conducted under a Cooperative Agreement with the Ocean Mapping Group from the University of New Brunswick (OMG/UNB). The OMG/UNB contracted with C&C Technologies, Inc. of Lafayette, LA for use of the RV Coastal Surveyor and the latest evolution of high-resolution multibeam sonars, a dual Kongsberg Simrad EM3000D.

California↗
USGS2025

Invasive African clawed frogs ( Xenopus laevis ) in Washington State: Status, response efforts, and lessons learned

The African clawed frog (ACF, Xenopus laevis ), which is indigenous to sub-Saharan Africa, is an aquatic invasive species known to have severe ecological impacts on native fauna when introduced into non-endemic regions. In 2015, ACFs were detected in Washington State, U.S. for the first time, and the species is now documented at three cities across western Washington: Lacey, Bothell, and Issaquah. We cataloged the known ACF occurrences, early management efforts, biological data about the frogs, and status of these invasive populations at the three sites from 2015–2023. The ACFs appear to be established in at least three watersheds in the Puget Sound region despite substantial effort at eradicating them at one site. Presence of ACFs in watersheds that lack surface connectivity implies independent introduction events, and the capture of frogs in multiple subbasins in the same watershed may reflect the potential for further spread. Because the ACF is nocturnal and otherwise behaviorally and visually highly cryptic, other established populations may go undetected. Where the ACFs are largely confined to stormwater ponds — as many of our current observations suggest — eradication may still be possible, though a substantial, focused effort would be required. In addition, significant refinement of eradication approaches will be needed to ensure effectiveness in topographically and vegetatively complex Pacific Northwest aquatic environments.

Washington↗
USGS2018

Everglades Invasive Reptile and Amphibian Monitoring Program

The Everglades Invasive Reptile and Amphibian Monitoring Program (EIRAMP) provides a scientific framework for integrated EDRR, outreach, and monitoring for invasive wildlife in South Florida. EIRAMP also monitors native reptiles, amphibians and mammals to assess impacts of invasive species. South Florida has more nonnative species of reptiles and amphibians than anywhere else in the world. Some of these species become invasive and harm the environment, economy, and/or public health. Many are predators that can severely impact native species and ecosystems. Controlling and monitoring these invaders are essential to the success of multi-billion dollar Everglades restoration efforts. Prevention and eradication are the most cost-effective ways to limit impacts of invasive species (see Figure 1). Once populations are widely established, management becomes expensive, long-term, and often ineffective. Early detection and rapid response (EDRR) offers the best chance to get ahead of the invasion curve and successfully contain or eradicate populations while they are still localized.

Florida↗
USGS2016

Municipal solid waste landfills harbor distinct microbiomes

Landfills are the final repository for most of the discarded material from human society and its “built environments.” Microorganisms subsequently degrade this discarded material in the landfill, releasing gases (largely CH 4 and CO 2 ) and a complex mixture of soluble chemical compounds in leachate. Characterization of “landfill microbiomes” and their comparison across several landfills should allow the identification of environmental or operational properties that influence the composition of these microbiomes and potentially their biodegradation capabilities. To this end, the composition of landfill microbiomes was characterized as part of an ongoing USGS national survey studying the chemical composition of leachates from 19 non-hazardous landfills across 16 states in the continental U.S. The landfills varied in parameters such as size, waste composition, management strategy, geography, and climate zone. The diversity and composition of bacterial and archaeal populations in leachate samples were characterized by 16S rRNA gene sequence analysis, and compared against a variety of physical and chemical parameters in an attempt to identify their impact on selection. Members of the Epsilonproteobacteria, Gammaproteobacteria, Clostridia, and candidate division OP3 were the most abundant. The distribution of the observed phylogenetic diversity could best be explained by a combination of variables and was correlated most strongly with the concentrations of chloride and barium, rate of evapotranspiration, age of waste, and the number of detected household chemicals. This study illustrates how leachate microbiomes are distinct from those of other natural or built environments, and sheds light on the major selective forces responsible for this microbial diversity.

Frontiers in Microbiology↗
USGS2017

Long-term and widespread changes in agricultural practices influence ring-necked pheasant abundance in California

Declines in bird populations in agricultural regions of North America and Europe have been attributed to agricultural industrialization, increases in use of agrochemical application, and increased predation related to habitat modification. Based on count data compiled from Breeding Bird Survey (BBS) from 1974 to 2012, Christmas Bird Count (CBC) collected from 1914 to 2013, and hunter data from Annual Game Take Survey (AGTS) for years 1948–2010, ring-necked pheasants ( Phasianus colchicus ) in California have experienced substantial declines in agricultural environments. Using a modeling approach that integrates all three forms of survey data into a joint response abundance index, we found pheasant abundance was related to the amount of harvested and unharvested crop land, types of crops produced, amount of total pesticide applied, minimum temperature, precipitation, and numbers of avian competitors and predators. Specifically, major changes in agricultural practices over the last three decades were associated with declines in pheasant numbers and likely reflected widespread loss of habitat. For example, increases in cropland were associated with increased pheasant abundance during early years of study but this effect decreased through time, such that no association in recent years was evidenced. A post hoc analysis revealed that crops beneficial to pheasant abundance (e.g., barley) have declined substantially in recent decades and were replaced by less advantageous crops (e.g., nut trees). An additional analysis using a restricted data set (1990–2013) indicated recent negative impacts on pheasant numbers associated with land use practices were also associated with relatively high levels of pesticide application. Our results may provide valuable information for management policies aimed at reducing widespread declines in pheasant populations in California and may be applicable to other avian species within agricultural settings. Furthermore, this general analytical approach is not limited to pheasants and could be applied to other taxa for which multiple survey data sources exist.

California↗