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USGS2022

Revisiting 228Th as a tool for determining sedimentation and mass accumulation rates

The use of 228Th has seen limited application for determining sedimentation and mass accumulation rates in coastal and marine environments. Recent analytical advances have enabled rapid, precise measurements of particle-bound 228Th using a radium delayed coincidence counting system (RaDeCC). Herein we review the 228Th cycle in the marine environment and revisit the historical use of 228Th as a tracer for determining sediment vertical accretion and mass accumulation rates in light of new measurement techniques. Case studies comparing accumulation rates from 228Th and 210Pb are presented for a micro-tidal salt marsh and a marginal sea environment. 228Th and 210Pb have been previously measured in mangrove, deltaic, continental shelf and ocean basin environments, and a literature synthesis reveals that 228Th (measured via alpha or gamma spectrometry) derived accumulation rates are generally equal to or greater than estimates derived from 210Pb, reflecting different integration periods. Use of 228Th is well-suited for shallow (<15 cm) cores over decadal timescales. Application is limited to relatively homogenous sediment profiles with minor variations in grain size and minimal bioturbation. When appropriate conditions are met, complimentary use of 228Th and 210Pb can demonstrate that the upper layers of a core are undisturbed and can improve spatial coverage in mapping accumulation rates due to the higher sample throughput for sediment 228Th.

Massachusetts↗

USGS2006

The Cretaceous Tetori biota in Japan and its evolutionary significance for terrestrial ecosystems in Asia

Cretaceous nonmarine deposits are widely distributed on the Asian continent and include various kinds of zoo- and phyto-assemblages. The Tetori Group is one of the most important Mesozoic terrestrial deposits in East Asia, and for this reason its geology, stratigraphy, and biota have been studied intensively by our group for more than a decade. We present the main results herein. We confirm that formations as lithostratigraphic units are the best geological correlation tools for the Tetori Group and the best tools for a geological mapping of the group. Although subgroups have previously been used for correlation, proper designation and evaluation of subgroups is required if they are to be used effectively, and we show that previous geological correlation of the Tetori Group has been confused by inappropriate definition of these subgroups. We located fossil localities including reported zoo- and phyto-assemblages in the framework of formations correlated by our stratigraphy. The occurrence of zoo-assemblages was probably controlled by environments (i.e., most are in situ), but phyto-assemblages were mostly transported and rapidly buried by high-energy river systems. Although two distinct dinosaur faunas and four floras have been named for the zoo- and phyto-assemblages in the Tetori Group, in reality there is only one Tetori Dinosaur Fauna and one Tetori Flora, as proved by careful correlation. Two types of zoo-assemblages co-occur in the Tetori Group: vertebrate species whose ancestors flourished in the Jurassic (as found in China), and their descendants from the Late Cretaceous. As the latter modern type of assemblage is more abundant than the former, changeable environments at the continental margin probably accelerated evolution of more modern species. We can employ nonmarine molluscan species as geological correlation tools in some cases, i.e., when their taxon ranges are well-confirmed by independent evidence. However, because freshwater molluscan species and terrestrial vertebrate species had many opportunities to move to optimum habitat as environments changed through time on the Cretaceous Asian continent, their correlation potential is uncertain. Many nonmarine molluscan species from the Japanese and Chinese Cretaceous had their stratigraphic occurrences controlled by changing environments. ?? 2005 Elsevier Ltd. All rights reserved.

Cretaceous Research↗

USGS2012

Extension of 239+240 Pu sediment geochronology to coarse-grained marine sediments

Sediment geochronology of coastal sedimentary environments dominated by sand has been extremely limited because concentrations of natural and bomb-fallout radionuclides are often below the limit of measurement using standard techniques. ICP-MS analyses of 239+240 Pu from two sites representative of traditionally challenging (i.e., low concentration) environments provide a "proof of concept" and demonstrate a new application for bomb-fallout radiotracers in the study of sandy shelf-seabed dynamics. A kasten core from the New Zealand shelf in the Southern Hemisphere (low fallout), and a vibracore from the sandy nearshore of North Carolina (low particle surface area) both reveal measurable 239+240 Pu activities at depth. In the case of the New Zealand site, independently verified steady-state sedimentation results in a 239+240 Pu profile that mimics the expected atmospheric fallout. The depth profile of 239+240 Pu in the North Carolina core is more uniform, indicating significant sediment resuspension, which would be expected in this energetic nearshore environment. This study, for the first time, demonstrates the utility of 239+240 Pu in the study of sandy environments, significantly extending the application of bomb-fallout isotopes to coarse-grained sediments, which compose the majority of nearshore regions.

Continental Shelf Research↗

USGS2020

Low O2 level enhances CH4-derived carbon flow into microbial communities in landfill cover soils

CH 4 oxidation in landfill cover soils plays a significant role in mitigating CH 4 release to the atmosphere. Oxygen availability and the presence of co-contaminants are potentially important factors affecting CH 4 oxidation rate and the fate of CH 4 -derived carbon. In this study, microbial populations that oxidize CH 4 and the subsequent conversion of CH 4 -derived carbon into CO 2 , soil organic C and biomass C were investigated in landfill cover soils at two O 2 tensions, i.e., O 2 concentrations of 21% (“sufficient”) and 2.5% (“limited”) with and without toluene. CH 4 -derived carbon was primarily converted into CO 2 and soil organic C in the landfill cover soils, accounting for more than 80% of CH 4 oxidized. Under the O 2 -sufficient condition, 52.9%–59.6% of CH 4 -derived carbon was converted into CO 2 (CE CO2-C ), and 29.1%–39.3% was converted into soil organic C (CE organic-C ). A higher CE organic-C and lower CE CO2-C occurred in the O 2 -limited environment, relative to the O 2 -sufficient condition. With the addition of toluene, the carbon conversion efficiency of CH 4 into biomass C and organic C increased slightly, especially in the O 2 -limited environment. A more complex microbial network was involved in CH 4 assimilation in the O 2 -limited environment than under the O 2 -sufficient condition. DNA-based stable isotope probing of the community with 13 CH 4 revealed that Methylocaldum and Methylosarcina had a higher relative growth rate than other type I methanotrophs in the landfill cover soils, especially at the low O 2 concentration, while Methylosinus was more abundant in the treatment with both the high O 2 concentration and toluene. These results indicated that O 2 -limited environments could prompt more CH 4 -derived carbon to be deposited into soils in the form of biomass C and organic C, thereby enhancing the contribution of CH 4 -derived carbon to soil community biomass and functionality of landfill cover soils (i.e. reduction of CO 2 emission).

Environmental Pollution↗

USGS2025

Mountain sentinels in a changing world: Review and conservation implications of weather and climate effects on mountain goats (Oreamnos americanus)

Climate change is occurring at an accelerated rate in high-elevation alpine and mountain ecosystems. Cold-adapted, mountain species are at risk due to forecasted change and knowledge is needed to respond to current and future conservation challenges. Mountain goats ( Oreamnos americanus ) are an iconic species of North American mountain cultures and landscapes, and due to specialized adaptations for life in cold, mountainous environments they are particularly sensitive to changes in weather and climate. As sentinels of change in alpine ecosystems, the study of mountain goats offers insight into the ecological effects and conservation challenges associated with climate change in these sensitive and biodiverse environments. Here, we synthesize existing knowledge about how climate change is expected to influence environmental conditions experienced by mountain goats and associated mechanistic changes to behavior, nutritional ecology, demography, health, and interspecific interactions. In many instances, climate change effects are likely to be negative and additive to existing threats (such as human disturbance, hunting, disease, predation) though benefits are expected in some cases. Changes in climate and mountain environments will necessitate re-examination and modification of population monitoring, management, and conservation strategies. Specifically, spatiotemporal (and other) aspects of monitoring and management may need to be adjusted to accommodate emerging and novel conservation challenges. Yet, key data and knowledge gaps remain and should be addressed to advance conservation and decision-making capabilities. For mountain goats and similarly climate-sensitive alpine herbivores, effective conservation will ultimately benefit from collaborations among diverse networks guided by well-planned, strategic visions focused on common ground – namely the resiliency and persistence of culturally and ecologically significant mountain species and the alpine environment they inhabit.

Alaska, Alberta, British Columbia, Idaho, Montana,↗

USGS2020

Recognition of typical antibiotic residues in environmental media related to groundwater in China (2009−2019)

The potential adverse environmental and health-related impacts of antibiotics are becoming more and more concerning. China is globally the largest antibiotic producer and consumer, possibly resulting in the ubiquity and high detection levels of antibiotics in environmental compartments. Clear status on the concentration levels and spatial distribution of antibiotic contamination in China's environment is necessary to gain insight into the establishment of legal and regulatory frameworks. This study collects information from over 170 papers reporting the occurrence and distribution of antibiotics in China's environment. A total of 110 antibiotics were detected, and 28 priority antibiotics were ubiquitous in China in almost all compartments of the environment, excluding the atmosphere. Seven dominant antibiotics in all environment compartments were identified by cluster analysis, including tetracycline, oxytetracycline, chlortetracycline, ofloxacin, enrofloxacin, norfloxacin, and ciprofloxacin. Meanwhile, sulfamethoxazole, sulfadiazine, and sulfamethazine were also frequently found in aqueous phases. Among the main basins where antibiotics were detected, the Haihe River Basin had higher median antibiotic concentrations in surface water compared to other basins, while the Huaihe River Basin had higher median concentrations in sediment. The median values of antibiotic concentrations in the sources were as follows: animal manure, 39 μg/kg (microgram per kilogram); WWTP (wastewater treatment plant) sludge, 39 μg/kg; animal wastewater, 156 ng/L (nanogram per liter); WWTP effluent: 15 ng/L. These concentrations are 1 − 2 orders of magnitude higher than that of the receptors (soil, 2.1 μg/kg; sediment, 4.7 μg/kg; surface water, 8.1 ng/L; groundwater, 2.9 ng/L), whether in solid or aqueous phases. Based on the number of detected antibiotics in various environmental compartments, animal farms and WWTPs are the main sources of antibiotics, and surface water and sediment are the main receptors of antibiotics. Hierarchical clustering identified the two main pathways of antibiotic transfer in various environmental compartments, which are from animal wastewater/WWTP effluent to surface water/sediment and from animal manure/WWTP sludge to soil/groundwater.

Journal of Hazardous Materials↗

USGS2022

Primary deposition and early diagenetic effects on the high saturation accumulation of gas hydrate in a silt dominated reservoir in the Gulf of Mexico

On continental margins, high saturation gas hydrate systems (>60% pore volume) are common in canyon and channel environments within the gas hydrate stability zone, where reservoirs are dominated by coarse-grained, high porosity sand deposits. Recent studies, including the results presented here, suggest that rapidly deposited, silt-dominated channel-levee environments can also host high saturation gas hydrate accumulations. Here we present several sedimentological data sets, including sediment composition, biostratigraphic age from calcareous nannofossils, grain size, total organic carbon (TOC), C/N elemental ratio, δ 13 C-TOC , CaCO 3 , total sulfur (TS), and δ 34 S-TS from sediments collected with pressure cores from a gas hydrate rich, turbidite channel-levee system in the Gulf of Mexico during the 2017 UT-GOM2-1 Hydrate Pressure Coring Expedition. Our results indicate the reservoir is composed of three main lithofacies, which have distinct sediment grain size distributions (type A-silty clay to clayey silt, type B-clayey silt, and type C-sandy silt to silty sand) that are characteristic of variable turbidity current energy regimes within a Pleistocene (< 0.91 Ma) channel-levee environment. We document that the TOC in the sediments of the reservoir is terrestrial in origin and contained within the fine fraction of each lithofacies, while the CaCO 3 fraction is composed of primarily reworked grains, including Cretaceous calcareous nannofossils, and part of the detrital load. The lack of biogenic grains within the finest grained sediment intervals throughout the reservoir suggests interevent hemipelagic sediments are not preserved, resulting in a reservoir sequence of silt dominated, stacked turbidites. We observe two zones of enhanced TS at the top and bottom of the reservoir that correspond with enriched bulk sediment δ 34 S, indicating stalled or slowly advancing paleo-sulfate-methane transition zone (SMTZ) positions likely driven by relative decreases in sedimentation rate. Despite these two diagenetic zones, the low abundance of diagenetic precipitates throughout the reservoir allowed the primary porosity to remain largely intact, thus better preserving primary porosity for subsequent pore-filling gas hydrate. In canyon, channel, and levee environments, early diagenesis may be regulated via sedimentation rates, where high rates result in rapid progression through the SMTZ and minimal diagenetic mineralization and low rates result in the stalling of the SMTZ, enhancing diagenetic mineralization. Here, we observed some enhanced pyritization to implicate potential sedimentation rate changes, but not enough to consume primary porosity, resulting in a high saturation gas hydrate reservoir. These results emphasize the important implications of sedimentary processes, sedimentation rates, and early diagenesis on the distribution of gas hydrate in marine sediments along continental margins.

Alabama, Louisiana, Mississippi↗

USGS2011

Stratigraphy of the Younger Dryas Chronozone and paleoenvironmental implications: Central and Southern Great Plains

The Great Plains of the United States was the setting for some of the earliest research in North America into patterns and changes in the character of late Pleistocene environments and their effects on contemporary human populations. Many localities in the region have well-stratified records of terminal Pleistocene and early Holocene human (Paleoindian) activity and past environments. These have proven important in debates over the character of the Younger Dryas Chronozone (YDC; 11,000–10,000 14 C BP; 12,900–11,700 cal BP) in the continental interior. This paper reviews the lithostratigraphic record of the YDC on the Central and Southern Great Plains and summarizes paleobiological records (largely isotopic). The goal is to determine if there is any uniformity in the timing, character, direction and/or magnitude of changes in depositional environments or broader geomorphic systems before, during or after the YDC in order to address the question of the character of environments through this time. The stratigraphic records of the late Pleistocene to early Holocene transition, and in particular, the stratigraphic records of the YDC vary through time and space. The data clearly show that a host of geomorphic processes produced the terminal Pleistocene and early Holocene stratigraphic records of the Great Plains. Moreover, the YDC is not necessarily manifest as a distinct lithostratigraphic or biostratigraphic entity in these different types of deposits and soils. The various geomorphic systems of the Great Plains did not behave synchronously in response to any common climate driver. These stratigraphic records reflect local environmental conditions and probably a complex response to the reorganization of mid-latitude climates in the terminal Pleistocene and early Holocene.

Montana, Wyoming, Colorado, New Mexico, Texas, Okl↗

USGS2006

Influence of depositional setting and sedimentary fabric on mechanical layer evolution in carbonate aquifers

Carbonate aquifers in fold-thrust belt settings often have low-matrix porosity and permeability, and thus groundwater flow pathways depend on high porosity and permeability fracture and fault zones. Methods from sedimentology and structural geology are combined to understand the evolution of fracture controlled flow pathways and determine their spatial distribution. Through this process bed-parallel pressure-solution surfaces (PS1) are identified as a fracture type which influences fragmentation in peritidal and basinal carbonate, and upon shearing provides a major flow pathway in fold - thrust belt carbonate aquifers. Through stratigraphic analysis and fracture mapping, depositional setting is determined to play a critical role in PS1 localization and spacing where peritidal strata have closer spaced and less laterally continuous PS1 than basinal strata. In the peritidal platform facies, units with planar lamination have bed-parallel pressure-solution seams along mudstone laminae. In contrast, burrowed units of peritidal strata have solution seams with irregular and anastamosing geometries. Laminated units with closely spaced bed-parallel solution seams are more fragmented than bioturbated units with anastamosing solution seams. In the deeper-water depositional environment, pelagic settling and turbidity currents are the dominant sedimentation processes, resulting in laterally continuous deposits relative to the peritidal platform environment. To quantify the fracture patterns in the basinal environment, mechanical layer thickness values were measured from regions of low to high bed dip. The results define a trend in which mechanical layer thickness decreases as layer dip increases. A conceptual model is presented that emphasizes the link between sedimentary and structural fabric for the peritidal and basinal environments, where solution seams localize in mud-rich intervals, and the resulting pressure-solution surface geometry is influenced by sedimentary geometry (i.e., stacked fining upward cycles, burrows, planar laminations). In both facies types, laterally continuous PS1 can behave as mechanical layer boundaries. As layer-parallel slip increases to accommodate shear strain in the fold - thrust belt, more PS1 behave as mechanical layer boundaries. ?? 2005 Elsevier B.V. All rights reserved.

Sedimentary Geology↗

USGS2023

Egg production and endocrine profiles of female whooping cranes (Grus americana) maintained ex situ are improved in naturalized enclosures

Whooping cranes ( Grus americana ) are naturally seasonal breeders and rely on wetland habitats throughout the annual cycle. However, captive cranes are commonly housed in dry outdoor pens, which may lack key environmental stimuli that in turn compromise reproduction. Our study sought to first, assess seasonal patterns of reproductive hormones in successful versus non-successful bird pairs and second, determine endocrine responses to alterations in enclosure environments. Fecal samples were collected from eight crane pairs year-round for 3 consecutive years, once a week during non-breeding season and three times a week during the breeding season. During Year 1, all pairs were housed in traditional dry pens, whereas during January of Year 2 all pairs were moved to either new dry pens (control, n = 4) or ponded pens (wetland, n = 4) and remained in the same pen until the end of the study. Fecal samples were assessed for gonadal (year-round) and adrenal (breeding season only) hormones. Estrogen and progestagen metabolite concentrations were low during non-breeding season in all females. However, as birds transition into a breeding season, gonadal hormone concentrations significantly increased ( p < 0.001) in laying females but not in non-laying individuals. Androgen metabolite concentrations during breeding seasons were higher ( p < 0.001) in males paired with non-laying females, with no variations observed during non-breeding months and within birds of the same reproductive output. We observed significant effect of enclosure environment on ovarian function of female whooping cranes. Specifically, mean estrogen metabolite concentrations increased after birds were moved from dry pen to wetland enclosures (Year 1: 349.1 ± 83.4 ng/g feces; Year 2: 382.7 ± 82.9 ng/g feces; Year 3: 556.5 ± 85.4 ng/g feces, p = 0.008 and 0.019 res p ectively,), whereas those of the control females remained constant. Further, estrogen concentration assessed during breeding season of Year 3 in females housed in wetland pens was higher than birds housed in a dry pen (556.5 ± 85.4 vs 311.7 ± 85.12 ng/g feces; p = 0.019). The number of eggs laid increased in three of the four pairs housed in the wetland pens, while there was no change in egg production in control birds (9 vs. 2 combined number of eggs produced by all pairs in each respective group in Year 3). Finally, moving birds to an enclosure that mimic natural environment did not impact androgen or glucocorticoid excretion. The findings demonstrate that differences in gonadal hormone production between laying and non-laying whooping crane females exist primarily during the breeding season, and that a more natural environment can have a positive influence on ovarian function in female whooping cranes.

Theriogenology Wild↗

USGS2011

No population genetic structure in a widespread aquatic songbird from the Neotropics

Neotropical lowland organisms often show marked population genetic structure, suggesting restricted migration among populations. However, most phylogeographic studies have focused on species inhabiting humid forest interior. Little attention has been devoted to the study of species with ecologies conducive to dispersal, such as those of more open and variable environments associated with watercourses. Using mtDNA sequences, we examined patterns of genetic variation in a widely distributed Neotropical songbird of aquatic environments, the Yellow-hooded Blackbird (Icteridae, Chrysomus icterocephalus ). In contrast to many forest species, Yellow-hooded Blackbirds showed no detectable genetic structure across their range, which includes lowland populations on both sides of the Andes, much of northeastern South America, Amazonia, as well as a phenotypically distinct highland population in Colombia. A coalescent-based analysis of the species indicated that its effective population size has increased considerably, suggesting a range expansion. Our results support the hypothesis that species occurring in open habitats and tracking temporally dynamic environments should show increased dispersal propensities (hence gene flow) relative to species from closed and more stable environments. The phenotypic and behavioral variation among populations of our study species appears to have arisen recently and perhaps in the face of gene flow.

Molecular Phylogenetics and Evolution↗

USGS1999

PAH refractory index as a source discriminant of hydrocarbon input from crude oil and coal in Prince William Sound, Alaska

Geochemical correlation and differentiation of hydrocarbons from crude oils and coals is difficult. The complex mixture of the hydrocarbon constituents and the dynamic nature of these constituents in the environment as they weather contribute to this difficulty A new parameter, the polycyclic aromatic hydrocarbon (PAH) refractory index, is defined here to help in this correlation. The PAH refractory index is a ratio of two of the most refractory constituents of most crude oils, namely triaromatic steranes and monomethylchrysenes. These are among the most persistent compounds in oil after deposition in the environment and thus retain reliably the signature of the original petroleum input. This index is utilized in Prince William Sound (PWS) to differentiate three different oils, as well as to provide evidence that coal, not oil, is the dominant source of the PAHs which are prominent constituents of marine sediments from PWS and the Gulf of Alaska.Geochemical correlation and differentiation of hydrocarbons from crude oils and coals is difficult. The complex mixture of the hydrocarbon constituents and the dynamic nature of these constituents in the environment as they weather contribute to this difficulty. A new parameter, the polycyclic aromatic hydrocarbon (PAH) refractory index, is defined here to help in this correlation. The PAH refractory index is a ratio of two of the most refractory constituents of most crude oils, namely triaromatic steranes and monomethylchrysenes. These are among the most persistent compounds in oil after deposition in the environment and thus retain reliably the signature of the original petroleum input. This index is utilized in Prince William Sound (PWS) to differentiate three different oils, as well as to provide evidence that coal, not oil, is the dominant source of the PAHs which are prominent constituents of marine sediments from PWS and the Gulf of Alaska.

Conference Paper↗

USGS2009

Chlorine-36 as a tracer of perchlorate origin

Perchlorate (ClO 4 − ) is ubiquitous in the environment. It is produced naturally by atmospheric photochemical reactions, and also is synthesized in large quantities for military, aerospace, and industrial applications. Nitrate-enriched salt deposits of the Atacama Desert (Chile) contain high concentrations of natural ClO 4 − , and have been exported worldwide since the mid-1800s for use in agriculture. The widespread introduction of synthetic and agricultural ClO 4 − into the environment has contaminated numerous municipal water supplies. Stable isotope ratio measurements of Cl and O have been applied for discrimination of different ClO 4 − sources in the environment. This study explores the potential of 36 Cl measurements for further improving the discrimination of ClO 4 − sources. Groundwater and desert soil samples from the southwestern United States (U.S.) contain ClO 4 − having high 36 Cl abundances ( 36 Cl/Cl = 3100 × 10 −15 to 28,800 × 10 −15 ), compared with those from the Atacama Desert ( 36 Cl/Cl = 0.9 × 10 −15 to 590 × 10 −15 ) and synthetic ClO 4 − reagents and products ( 36 Cl/Cl = 0.0 × 10 −15 to 40 × 10 −15 ). In conjunction with stable Cl and O isotope ratios, 36 Cl data provide a clear distinction among three principal ClO 4 − source types in the environment of the southwestern U.S.

Environmental Science & Technology↗

USGS1999

Occurrence and behavior of the herbicide Prometon in the hydrologic system

Prometon, a triazine herbicide, is used for total vegetation control on industrial sites, on noncrop areas on farms, in and under asphalt, and to a small extent by homeowners. Prometon has often been detected in surface water and groundwater in studies reported in the literature, but its presence is seldom discussed, partly because of its infrequent inclusion on lists of herbicides used in either agricultural or urban areas. In recent large-scale studies by the U.S. Geological Survey, prometon has been the most commonly detected herbicide in surface water and groundwater in urban areas and the third and fourth most commonly detected herbicide in groundwater and surface water, respectively, in agricultural areas. It also has been detected in rain. The frequent detection of prometon in the environment is discussed in relation to its use practices and predicted environmental behavior. Prometon is compared to atrazine, a structurally similar agricultural triazine herbicide that is one of the most studied and most commonly detected herbicides found in the hydrologic environment. The environmental data presented here demonstrate the wide-scale occurrence of prometon in all components of the hydrologic system, particularly in the surface water and groundwater of urban areas.Prometon, a triazine herbicide, is used for total vegetation control on industrial sites, on noncrop areas on farms, in and under asphalt, and to a small extent by homeowners. Prometon has often been detected in surface water and groundwater in studies reported in the literature, but its presence is seldom discussed, partly because of its infrequent inclusion on lists of herbicides used in either agricultural or urban areas. In recent large-scale studies by the U.S. Geological Survey, prometon has been the most commonly detected herbicide in surface water and groundwater in urban areas and the third and fourth most commonly detected herbicide in groundwater and surface water, respectively, in agricultural areas. It also has been detected in rain. The frequent detection of prometon in the environment is discussed in relation to its use practices and predicted environmental behavior. Prometon is compared to atrazine, a structurally similar agricultural triazine herbicide that is one of the most studied and most commonly detected herbicides found in the hydrologic environment. The environmental data presented here demonstrate the wide-scale occurrence of prometon in all components of the hydrologic system, particularly in the surface water and groundwater of urban areas.

Environmental Science & Technology↗

USGS2003

Foraminifera as bioindicators in coral reef assessment and monitoring: The foram index

Coral reef communities are threatened worldwide. Resource managers urgently need indicators of the biological condition of reef environments that can relate data acquired through remote-sensing, water-quality and benthic-community monitoring to stress responses in reef organisms. The "FORAM" (Foraminifera in Reef Assessment and Monitoring) Index (FI) is based on 30 years of research on reef sediments and reef-dwelling larger foraminifers. These shelled protists are ideal indicator organisms because: ??? Foraminifers are widely used as environmental and paleoenvironmental indicators in many contexts; ??? Reef-building, zooxanthellate corals and foraminifers with algal symbionts have similar water-quality requirements; ??? The relatively short life spans of foraminifers as compared with long-lived colonial corals facilitate differentiation between long-term water-quality decline and episodic stress events; ??? Foraminifers are relatively small and abundant, permitting statistically significant sample sizes to be collected quickly and relatively inexpensively, ideally as a component of comprehensive monitoring programs; and ??? Collection of foraminifers has minimal impact on reef resources. USEPA guidelines for ecological indicators are used to evaluate the FI. Data required are foraminiferal assemblages from surface sediments of reef-associated environments. The FI provides resource managers with a simple procedure for determining the suitability of benthic environments for communities dominated by algal symbiotic organisms. The FI can be applied independently, or incorporated into existing or planned monitoring efforts. The simple calculations require limited computer capabilities and therefore can be applied readily to reef-associated environments worldwide. In addition, the foraminiferal shells collected can be subjected to morphometric and geochemical analyses in areas of suspected heavy-metal pollution, and the data sets for the index can be used with other monitoring data in detailed multidimensional assessments.

Environmental Monitoring and Assessment↗

USGS2012

Hydrous carbonates on Mars?: Evidence from Mariner 6/7 infrared spectrometer and ground‐based telescopic spectra

Absorption features at 2.28 and 5.4 μm identified in Mariner 6/7 infrared spectrometer and terrestrial telescopic spectra are consistent with the spectra of hydrous magnesium carbonates such as hydromagnesite and artinite. Spectral characteristics of these hydrous carbonates are different from those of the anhydrous carbonates, as the former do not have the strong spectral features typically associated with anhydrous carbonates such as calcite and siderite. Theoretical mixing indicates that, depending on the type of hydrous carbonate, 10–20 wt % can be incorporated into the regolith without contradicting the spectral observations or the Viking x ray fluorescence chemical analysis. Hydrous carbonates form as weathering products of mafic minerals in the presence of H 2 O and CO 2 , even in the Antarctic. Their formation as evaporite minerals from either original magmas or hydrothermally altered rocks is consistent with the Martian environment, provided liquid water is or has been at least transiently present. On Earth, formation of hydrous Mg carbonates is associated with the production of amorphous iron oxides, which is consistent with both the environment and the inferred surface mineralogy of Mars. These minerals are about 60 wt % H 2 O, CO 3 , and OH; if they are abundant everywhere at the 10% level, then about 6% of the surface weight could be volatiles bound in this type of mineral. Although the stability of hydrous carbonates in a Martian environment is uncertain, there may be kinetic factors inhibiting the dehydration of these minerals, which may persist metastably in the current environment. Although the spectroscopic evidence for anhydrous carbonates is scant, the possible presence of hydrous carbonates provides an appealing mechanism for the existence of carbonates on Mars.

Journal of Geophysical Research↗

USGS2020

Environmental gradients of selection for an alpine-obligate bird, the white-tailed ptarmigan (Lagopus leucura)

The warming climate will expose alpine species adapted to a highly seasonal, harsh environment to novel environmental conditions. A species can shift their distribution, acclimate, or adapt in response to a new climate. Alpine species have little suitable habitat to shift their distribution, and the limits of acclimation will likely be tested by climate change in the long-term. Adaptive genetic variation may provide the raw material for species to adapt to this changing environment. Here, we use a genomic approach to describe adaptive divergence in an alpine-obligate species, the white-tailed ptarmigan ( Lagopus leucura ), a species distributed from Alaska to New Mexico, across an environmentally variable geographic range. Previous work has identified genetic structure and morphological, behavioral, and physiological differences across the species’ range; however, those studies were unable to determine the degree to which adaptive divergence is correlated with local variation in environmental conditions. We used a genome-wide dataset generated from 95 white-tailed ptarmigan distributed throughout the species’ range and genotype–environment association analyses to identify the genetic signature and environmental drivers of local adaptation. We detected associations between multiple environmental gradients and candidate adaptive loci, suggesting ptarmigan populations may be locally adapted to the plant community composition, elevation, local climate, and to the seasonality of the environment. Overall, our results suggest there may be groups within the species’ range with genetic variation that could be essential for adapting to a changing climate and helpful in guiding conservation action.

Alaska, Washington, Montana, Colorado, New Mexico,↗

USGS2001

Partitioning sources of variation in vertebrate species richness

Aim: To explore biogeographic patterns of terrestrial vertebrates in Maine, USA using techniques that would describe local and spatial correlations with the environment. Location: Maine, USA. Methods: We delineated the ranges within Maine (86,156 km2) of 275 species using literature and expert review. Ranges were combined into species richness maps, and compared to geomorphology, climate, and woody plant distributions. Methods were adapted that compared richness of all vertebrate classes to each environmental correlate, rather than assessing a single explanatory theory. We partitioned variation in species richness into components using tree and multiple linear regression. Methods were used that allowed for useful comparisons between tree and linear regression results. For both methods we partitioned variation into broad-scale (spatially autocorrelated) and fine-scale (spatially uncorrelated) explained and unexplained components. By partitioning variance, and using both tree and linear regression in analyses, we explored the degree of variation in species richness for each vertebrate group that Could be explained by the relative contribution of each environmental variable. Results: In tree regression, climate variation explained richness better (92% of mean deviance explained for all species) than woody plant variation (87%) and geomorphology (86%). Reptiles were highly correlated with environmental variation (93%), followed by mammals, amphibians, and birds (each with 84-82% deviance explained). In multiple linear regression, climate was most closely associated with total vertebrate richness (78%), followed by woody plants (67%) and geomorphology (56%). Again, reptiles were closely correlated with the environment (95%), followed by mammals (73%), amphibians (63%) and birds (57%). Main conclusions: Comparing variation explained using tree and multiple linear regression quantified the importance of nonlinear relationships and local interactions between species richness and environmental variation, identifying the importance of linear relationships between reptiles and the environment, and nonlinear relationships between birds and woody plants, for example. Conservation planners should capture climatic variation in broad-scale designs; temperatures may shift during climate change, but the underlying correlations between the environment and species richness will presumably remain.

Journal of Biogeography↗