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USGS2025

Ecosystems

The Fifth National Climate Assessment updates the evidence regarding how climate change influences ecosystems, biological diversity, and the implications for changes to critical ecosystem services—as noted in the key messages above (McElwee et al., 2023). Large-scale transformational changes to ecosystems are occurring, including—but not limited to—land-use conversion, hydrological alteration, and fire regimes. Implications of such transformational change include ecosystem capacity to maintain biological diversity and ecosystem services, impacting recreational opportunities (e.g., hunting and fishing, birding, ecotourism) and agriculture production (McElwee et al., 2023). A central tenet of the Fifth National Climate Assessment regarding ecosystems was the shifts to alternative states and how the Resist-Accept-Direct (RAD) framework may guide the adaptive management of ecosystems moving forward (Lynch et al., 2022). Nebraska is in the northern Great Plains, where extremes in climate and resulting ecosystem processes are experienced (Knapp et al., 2023). Pressures on ecosystems to provide essential services, including healthy soil and water to benefit humans and animals, will inevitably impact economic development, urban and rural communities, and fish and wildlife populations as climate change continues (Knapp et al., 2023). All ecosystems will be impacted in Nebraska, but aquatic systems—wetlands, aquifers, lakes, streams, and rivers—may be most impacted, given the scarcity of water as human demand (i.e., agriculture and a growing population) persists and increases (Bathke et al., 2014). Major knowledge gaps remain regarding how fish and wildlife populations will persist in changing environments. Past changes, including large-scale land conversion, water delivery systems, and water storage (construction of reservoirs), suggest that some species can adapt to novel environments and shift distributions. However, many more species may be maladapted to the expected changes in climate. Species may be unable to move to suitable habitats, and biological constraints under rapidly changing conditions may impede adaptation— resulting in extirpation and potential extinction. Further, changing conditions open multiple pathways for invasive species and novel diseases, impacting native fish populations, wildlife populations, and human health.

Nebraska↗

USGS2010

Evidence of weak contaminant-related oxidative stress in glaucous gulls (Larus hyperboreus) from the Canadian arctic

Environmental contaminants are transported over great distances to Arctic ecosystems, where they can accumulate in wildlife. Whether contaminant concentrations in wildlife are sufficient to produce adverse effects remains poorly understood. Exposure to contaminants elevates oxidative stress with possible fitness consequences. The glaucous gull ( Larus hyperboreus ), an Arctic top predator, was used as a bioindicator for investigating relationships between contaminant levels (organochlorines and polychlorinated biphenyls [OC/PCB], mercury [Hg], and selenium [Se]) and measures of oxidative stress (glutathione [GSH] metabolism and lipid peroxidation) in Canadian Arctic ecosystems. Contaminant levels were low and associations between contaminant exposure and oxidative stress were weak. Nevertheless, glutathione peroxidase activity rose with increasing hepatic Se concentrations, levels of thiols declined as Hg and OC/PCB levels rose, and at one of the two study sites levels of lipid peroxidation were elevated with increasing levels of hepatic Hg. These results suggest the possibility of a deleterious effect of exposure to contaminants on gull physiology even at low contaminant exposures.

Arctic↗

USGS2026

Facilitating water resilience in wildfire affected communities: Lessons learned from rapid response research

Wildland–urban interface fires (WUI fires) can pose a significant threat to water resources, including drinking water supplies, water treatment infrastructure, ecosystem function, and agricultural irrigation. Wildfires, especially WUI fires, are expected to increase in frequency and severity. Despite the need for effective mitigation and response strategies for wildfires, rapid research co-production to support decision-making for water incident response and water management is generally limited. This manuscript draws on five U.S. wildfire case studies to highlight how research co-production between scientists, water agencies, and managers supports more effective decision-making for water resilience and recovery. The case studies demonstrate the importance of rapid response activities, coordinating collaborative response, pre-wildfire preparation, and knowledge co-production among agencies, researchers, and managers in addressing the impacts of wildfires on water supply and quality. The lessons learned emphasize opportunities to pivot wildfire-water research and operations from reactive to proactive, focusing on mutually beneficial activities such as understanding watershed health, fostering collaboration, embracing new discoveries and tools, and enabling pre-wildfire research through table-top activities, workshops, pre-fire data collection and analysis, and appointing a central water response lead. These outcomes inform the development of a research-to-operations and operations-to-research (R2O2R) co-production framework and future opportunities to guide proactive response and management efforts before, during, and after wildfire.

California, Hawaii, New Mexico↗

USGS2013

Operational Group Sandy technical progress report

Hurricane Sandy made US landfall near Atlantic City, NJ on 29 October 2012, causing 72 direct deaths, displacing thousands of individuals from damaged or destroyed dwellings, and leaving over 8.5 million homes without power across the northeast and mid-Atlantic. To coordinate federal rebuilding activities in the affected region, the President established the cabinet-level Hurricane Sandy Rebuilding Task Force (Task Force). The Task Force was charged with identifying opportunities for achieving rebuilding success while supporting economic vitality, improving public health and safety, protecting and enhancing natural and manmade infrastructure, bolstering resilience, and ensuring appropriate accountability. The Department of the Interior (DOI) Strategic Sciences Group (SSG) was established in 2012 to provide interdisciplinary science-based scenarios for environmental crises affecting Departmental resources. In January 2013, the Secretary of the Interior directed the SSG to support the Department’s participation in the Task Force. The SSG assembled a team of experts from government, academia, and non-governmental organizations – Operational Group Sandy (OGS) – to develop scenarios for the impacts of Hurricane Sandy and future major storms on coastal communities and urban systems in the New York/New Jersey region. This report documents results from the March 2013 deployment of the OGS. It includes background information on Hurricane Sandy and the federal response; the OGS methodology; scenarios for Hurricane Sandy’s impact on coastal communities and urban ecosystems; potential interventions to improve regional resilience to future major storms; a discussion of scenario results; and lessons learned about the OGS process.

Report↗

USGS2009

Impact of wildfire on levels of mercury in forested watershed systems: Voyageurs National Park, Minnesota

Atmospheric deposition of mercury to remote lakes in mid-continental and eastern North America has increased approximately threefold since the mid-1800s (Swain and others, 1992; Fitzgerald and others, 1998; Engstrom and others, 2007). As a result, concerns for human and wildlife health related to mercury contamination have become widespread. Despite an apparent recent decline in atmospheric deposition of mercury in many areas of the Upper Midwest (Engstrom and Swain, 1997; Engstrom and others, 2007), lakes in which fish contain levels of mercury deemed unacceptable for human consumption and possibly unacceptable for fish-consuming wildlife are being detected with increasing frequency. In northern Minnesota, Voyageurs National Park (VNP) (fig. 1) protects a series of southern boreal lakes and wetlands situated on bedrock of the Precambrian Canadian Shield. Mercury contamination has become a significant resource issue within VNP as high concentrations of mercury in loons, bald eagle eaglets, grebes, northern pike, and other species of wildlife and fish have been found. The two most mercury-contaminated lakes in Minnesota, measured as methylmercury in northern pike ( Esox lucius ), are in VNP. Recent multidisciplinary U.S. Geological Survey (USGS) research demonstrated that the bulk of the mercury in lake waters, soils, and fish in VNP results from atmospheric deposition (Wiener and others, 2006). The study by Wiener and others (2006) showed that the spatial distribution of mercury in watershed soils, lake waters, and age-1 yellow perch ( Perca flavescens ) within the Park was highly variable. The majority of factors correlated for this earlier study suggested that mercury concentrations in lake waters and age-1 yellow perch reflected the influence of ecosystem processes that affected within-lake microbial production and abundance of methylmercury (Wiener and others, 2006), while the distribution of mercury in watershed soils seemed to be partially dependent on forest disturbance, especially the historic forest fire pattern (Woodruff and Cannon, 2002). Forest fire has an essential role in the forest ecosystems of VNP (Heinselman, 1996). Because resource and land managers need to integrate both natural wildfire and prescribed fire in management plans, the potential influence of fire on an element as sensitive to the environment as mercury becomes a critical part of their decisionmaking. A number of recent studies have shown that while fire does have a significant impact on mercury at the landscape level, the observed effects of fire on aquatic environments are highly variable and unpredictable (Caldwell and others, 2000; Garcia and Carrigan, 2000; Kelly and others, 2006; Nelson and others, 2007). Caldwell and others (2000) described an increase in methylmercury in reservoir sediments resulting from mobilization and transport of charred vegetative matter following a fire in New Mexico. Krabbenhoft and Fink (2000) attributed increases in total mercury concentrations in young-of-the-year fish in the Florida Everglades to release of mercury resulting from peat oxidation following fires. A fivefold increase in whole-body mercury accumulation by rainbow trout ( Oncorhynchus mykiss ) following a fire in Alberta, Canada, apparently resulted from increased nutrient concentrations that enhanced productivity and restructured the food web of a lake within the fire’s burn footprint (Kelly and others, 2006). For this study, we determined the short-term effects of forest fire on mercury concentrations in terrestrial and aquatic environments in VNP by comparing and contrasting mercury concentrations in forest soils, lake waters, and age-1 yellow perch for a burned watershed and an adjacent lake, with similar samples from watersheds and lakes with no fire activity (control watersheds and lakes). The concentration of total mercury in whole, 1-year-old yellow perch serves as a good biological indicator for monitoring trends in methylmercury concentrations in food webs of lakes in North America (Wiener and others, 2007). With a limited gape, age-1 yellow perch that hatched the previous year and resided in a lake for 1 year feed largely on zooplankton and small benthic invertebrates. Thus, age-1 yellow perch provide a baseline for methylmercury concentrations for individual lakes that can be compared across spatial areas. The nine appendixes that accompany this report contain the complete datasets for soils, lake waters, and age-1 yellow perch collected for this study. This report uses data from these three media to provide a framework for evaluating short-term effects of fire on mercury in forested soils and possible effects of the mobilization of mercury from soils on lake water quality and aquatic health.

Minnesota↗

USGS2025

Waterfront property owners' shoreline preferences amid salt marsh to mangrove transitions

1. We examined the influence of mangrove encroachment into salt marsh areas along the northern Gulf of Mexico (USA) on waterfront property owners' perceptions of coastal health and preferences for shoreline management. 2. Using mail-in and online surveys, we targeted over 3000 waterfront property owners across four jurisdictions experiencing or anticipating mangrove encroachment. 3. Our findings revealed a nuanced perception of coastal health, with many respondents recognizing the potentially environmental impacts of mangrove encroachment but favouring low-cost management strategies, such as maintaining current shoreline or passive monitoring. This reluctance to engage in active management highlights a perception-behaviour gap, likely influenced by the gradual nature of mangrove transitions, which diminishes urgency for active intervention. 4. Socio-demographic factors such as age, gender, income, residency and reliance on coastal resources significantly shaped preferences for shoreline management and regional responses. These preferences varied across jurisdictions, reflecting the importance of incorporating localized community values into management decisions. 5. Our findings highlight the need for a balanced approach to shoreline management that integrates ecological insights with the socio-cultural priorities of local communities. By aligning adaptation strategies with regional perceptions and values, it is possible to protect individual properties while enhancing the long-term resilience of coastal ecosystems under climate change pressures.

Florida, Texas↗

USGS2002

Chemical attributes of some clouds amid a forest ecosystem's trees

Simultaneous physical and chemical characteristics of clouds amid and above the trees of a montane forest, located about 3.3 km southwest of Mt. Mitchell, NC, were collected between 13 and 22 June 1993. This paper summarizes the chemical characteristics of the cloud droplets amid the trees. The ionic composition and pH of the analyzed amid-canopy cloud water samples are generally consistent with those of previous above-canopy cloud water samples obtained at this site. Magnesium, sodium, and calcium are highly correlated to each other amid the canopy as compared to above the canopy. Above-canopy and amid-canopy cloud-only episodes, with concurrent event-averaged cloud water pH values at or below 3.1, generally contain more magnesium, sodium, and calcium in the amid-canopy cloud water samples compared to concurrent above-canopy cloud water samples. The observed chemical differences between the amid-canopy cloud and the above-canopy cloud suggest an unhealthier environment for the tree canopy when the cloud water traversing this site has a pH value at or below 3.1. The predominant ion deposition fluxes were calculated to provide preliminary data for studies designed to explicitly quantify how the chemical composition of cloud water affects tree health.

Atmospheric Research↗

USGS2015

Metallogeny, exploitation and environmental impact of the Mt. Amiata mercury ore district (Southern Tuscany, Italy)

The Mt. Amiata mining district (Southern Tuscany, Italy) is a world class Hg district, with a cumulate production of more than 100,000 tonnes of Hg, mostly occurring between 1870 and 1980. The Hg mineralization at Mt. Amiata is younger than 0.3 Ma, and is directly related to shallow hydrothermal systems similar to present-day geothermal fields of the region. There is likely a continuum of Hg deposition to present day, because Hg emission from geothermal power plants is on-going. In this sense, the Mt. Amiata deposits present some analogies with “hot-spring type” deposits of western USA, although an ore deposit model for the district has not been established. Specifically, the source of Hg remains highly speculative. The mineralizing hydrothermal fluids are of low temperature, and of essentially meteoric origin. Recent results by our research group indicate that, 30 years after mine closure, the environmental effects of Hg contamination related to mining are still recorded by the ecosystem, namely on waterways of the Paglia and Tiber River basins. In particular, the close spatial connection between the town of Abbadia San Salvatore, the Hg mine within its immediate neighborhood, and the drainage catchment of the Paglia River has an influence also on Hg speciation, transported mainly in the particulate form by the river system. The extent of Hg contamination has been identified at least 100 km from Abbadia San Salvatore along the Paglia-Tiber River system. Estimated annual Hg mass loads transported by the Paglia River to the Tiber River were about 11 kg yr −1 . However, there is evidence that flood events may enhance Hg mobilization in the Paglia River basin, increasing Hg concentrations in stream sediment. The high methyl-Hg/Hg ratio in water in this area is an additional factor of great concern due to the potential harmful effects on human and wildlife health. Results of our studies indicate that the Mt. Amiata region is at present a source of Hg of remarkable environmental concern at the local, regional (Tiber River), and Mediterranean scales. Ongoing studies are aimed to a more detailed quantification of the Hg mass load input to the Mediterranean Sea, and to unravel the processes concerning Hg transport and fluid dynamics.

Tuscany↗

USGS2011

Overview on the effects of parasites on fish health

It is believed by many that parasites are only as important as the fish they infect. Parasites are ubiquitous, primarily surviving in a dynamic equilibrium with their host(s) and they are often overlooked in fish health assessments. Changes in the environment, both anthropogenic and environmental, can alter the parasite/host equilibrium and cause disease or mortality in fish. Therefore it is imperative that we have knowledge of both parasites and parasitic communities within a given population. When fish kills occur, it can often be associated with changes in parasite density and community composition. Often the damage associated with these fish is relative to the rate of infestation with the parasite; a fish that is lightly infected will show few signs of the parasite, while a heavily infected fish may become physiologically impaired and even die. Parasites can cause mechanical damage (fusion of gill lamellae, tissue replacement), physiological damage (cell proliferation, immunomodulation, detrimental behavioral responses, altered growth) and reproductive damage. As parasitism is the most common lifestyle on the planet, understanding its role in the environment may help researchers understand changes in a given fish population or stream ecosystem.

Conference Paper↗

USGS2020

Energy development and production in the Great Plains: Implications and restoration opportunities

Energy is an integral part of society. The major US energy sources of fossil fuels (coal, oil, natural gas); biofuels (ethanol); and wind are concentrated in grassland ecosystems of the Great Plains. As energy demand continues to increase, mounting pressures will be placed on North American grassland systems. In this review, we present the ecological effects of energy development and production on grassland systems. We then identify opportunities to mitigate these effects during the planning, construction, and production phases by using informed methodology and improved technology. Primary effects during energy development include small- and large-scale soil disturbance and vegetation removal as small patches of grasslands are used to host oil or gas wells, wind turbine pads, associated roadways, and pipelines or through the conversion of large grassland areas to biofuel croplands. Direct habitat loss or habitat fragmentation can affect wildlife directly through increased mortality or indirectly through reduction in habitat quantity and quality. During energy production, air and water quality can be affected through regular emissions or unplanned spills. Energy development can also affect the economy and health of local communities. During planning, energy development and production effects can be reduced by carefully considering effects on grasslands during siting and even by selecting different energy source types. During construction, effects on soil and plant systems can be minimized by eliminating weed populations before disturbance, salvaging and stockpiling topsoil for future revegetation, and harvesting native local seed for postsite restoration. During energy production operations, noise and road traffic reduction plans and atmospheric monitoring will enable more informed mitigation measures. Continued research on energy development effects and mitigation measures is necessary to establish best management practices beneficial to grassland health while providing needed energy for the United States.

Colorado, Illinois, Indiana, Iowa, Kansas, Minneso↗

USGS2014

The Caloosahatchee River Estuary: A monitoring partnership between Federal, State, and local governments, 2007-13

The tidal Caloosahatchee River and downstream estuaries have substantial environmental, recreational, and economic value for southwest Florida residents and visitors. Modifications to the Caloosahatchee River watershed have altered the predevelopment hydrology, thereby threatening the environmental health of estuaries in the area. Hydrologic monitoring of the freshwater contributions from tributaries to the tidal Caloosahatchee River and its estuaries is necessary to adequately describe the total freshwater inflow and constituent loads to the delicate estuarine system. From 2007 to 2013, the U.S. Geological Survey (USGS), in cooperation with the Florida Department of Environmental Protection (FDEP) and the South Florida Water Management District (SFWMD), operated a flow and salinity monitoring network at tributaries flowing into and at key locations within the tidal Caloosahatchee River. This network was designed to supplement existing long-term monitoring stations, such as W.P. Franklin Lock, also known as S–79, which are operated by the USGS in cooperation with the U.S. Army Corps of Engineers, Lee County, and the City of Cape Coral. Additionally, a monitoring station was operated on Sanibel Island from 2010 to 2013 as part of the USGS Greater Everglades Priority Ecosystem Science initiative and in partnership with U.S. Fish and Wildlife Service (J.N. Ding Darling National Wildlife Refuge). Moving boat water-quality surveys throughout the tidal Caloosahatchee River and downstream estuaries began in 2011 and are ongoing. Information generated by these monitoring networks has proved valuable to the FDEP for developing total maximum daily load criteria, and to the SFWMD for calibrating and verifying a hydrodynamic model. The information also supports the Caloosahatchee River Watershed Protection Plan.

Florida↗

USGS2010

Global change and water resources in the next 100 years

We are in the midst of a continental-scale, multi-year experiment in the United States, in which we have not defined our testable hypotheses or set the duration and scope of the experiment, which poses major water-resources challenges for the 21st century. What are we doing? We are expanding population at three times the national growth rate in our most water-scarce region, the southwestern United States, where water stress is already great and modeling predicts decreased streamflow by the middle of this century. We are expanding irrigated agriculture from the west into the east, particularly to the southeastern states, where increased competition for ground and surface water has urban, agricultural, and environmental interests at odds, and increasingly, in court. We are expanding our consumption of pharmaceutical and personal care products to historic high levels and disposing them in surface and groundwater, through sewage treatment plants and individual septic systems. These substances are now detectable at very low concentrations and we have documented significant effects on aquatic species, particularly on fish reproduction function. We don’t yet know what effects on human health may emerge, nor do we know if we need to make large investments in water treatment systems, which were not designed to remove these substances. These are a few examples of our national-scale experiment. In addition to these water resources challenges, over which we have some control, climate change models indicate that precipitation and streamflow patterns will change in coming decades, with western mid-latitude North America generally drier. We have already documented trends in more rain and less snow in western mountains. This has large implications for water supply and storage, and groundwater recharge. We have documented earlier snowmelt peak spring runoff in northeastern and northwestern States, and western montane regions. Peak runoff is now about two weeks earlier than it was in the first half of the 20th century. Decreased summer runoff affects water supply for agriculture, domestic water supply, cooling needs for thermoelectric power generation, and ecosystem needs. In addition to the reduced volume of streamflow during warm summer months, less water results in elevated stream temperature, which also has significant effects on cooling of power generating facilities and on aquatic ecosystem needs. We are now required to include fish and other aquatic species in negotiation over how much water to leave in the river, rather than, as in the past, how much water we could remove from a river. Additionally, we must pay attention to the quality of that water, including its temperature. This is driven in the US by the Endangered Species Act and the Clean Water Act. Furthermore, we must now better understand and manage the whole hydrograph and the influence of hydrologic variability on aquatic ecosystems. Man has trimmed the tails off the probability distribution of flows. We need to understand how to put the tails back on but can’t do that without improved understanding of aquatic ecosystems. Sea level rise presents challenges for fresh water extraction from coastal aquifers as they are compromised by increased saline intrusion. A related problem faces users of ‘run-of-the-river’ water-supply intakes that are threatened by a salt front that migrates further upstream because of higher sea level. We face significant challenges with water infrastructure. The U.S. has among the highest quality drinking water in the world piped to our homes. However, our water and sewage treatment plants and water and sewer pipelines have not had adequate maintenance or investment for decades. The US Environmental Protection Agency estimates that there are up to 3.5M illnesses per year from recreational contact with sewage from sanitary sewage overflows. Infrastructure investment needs have been put at 5 trillion nationally. Global change and water resources c

Conference Paper↗

USGS2013

Impacts of migratory Sandhill Cranes (Grus canadensis) on microbial water quality in the central Platte River, Nebraska, USA

Wild birds have been shown to be significant sources of numerous types of pathogens that are relevant to humans and agriculture. The presence of large numbers of migratory birds in such a sensitive and important ecosystem as the Platte River in central Nebraska, USA, could potentially serve a significant source of bird-derived pathogens in the water/sediment and riverine environment. In 2009 and 2010, a study was completed to investigate the potential water-quality impacts of Sandhill Cranes and Snow Geese on the microbial water quality of the central Platte River during their spring migration period. Fecal material, river-bottom sediment, and water samples were collected from January through May of each year during the spring migration season of Sandhill Cranes in the Central Flyway of North America. Results indicate that several types of fecal indicator bacteria and from a range of viral, protozoan, and bacterial pathogens, Campylobacter jejuni were present in Sandhill Crane excreta, and at significantly higher frequency and densities in water and sediments when the Sandhill Cranes were present, particularly during evening roosts within the Platte River environment. Therefore, further investigation of the health significance of avian pathogens is warranted for the Platte River in Central Nebraska during migration of Sandhill Cranes and other waterfowl.

Nebraska↗

USGS1996

Water flows and nutrient loads to the southwest coast of Florida—A study

Background The embayments and estuaries of Florida's southwest coast are an integral part of the south Florida ecosystem. Nutrients and other constituents are transported to these coastal waters by surface water and ground-water flow from the Everglades National Park (ENP) and the Big Cypress Preserve and by longshore and offshore tidal currents. The coastal area is an essential breeding ground for many estuarine and marine species and is a popular location for wilderness recreational pursuits as well as sport fishing. The volume of flow and the loads of nutrients being discharged from the streams draining the upland areas of ENP and Big Cypress Preserve currently are unknown. As part of Everglades restoration activities, the U.S. Army Corps of Engineers may change the volume or location of water deliveries to the ENP. Such changes could affect the volume or distribution of inflow and associated constituents that are transported into the coastal waters of southwest Florida. Proposals to change water deliveries to the Everglades National Park and efforts to improve the environmental health of Florida Bay cannot be evaluated without some understanding of the hydrologic and water-quality characteristics of tidal rivers and coastal embayments in the region. The southwest coast of Florida is part of a wilderness area with unique hydraulic characteristics that has historically been described as the "River of Grass." Flat terrain and lack of controlled topographic information has made it difficult to define drainage divides. Low gradients, coupled with tidal effects, create complex conditions under which to measure riverine flow. It has been almost thirty years since any effort has been made to monitor flow characteristics continuously in the area. Significant technological advancements have occurred during this time and this new technology can be applied to help obtain the information needed to make informed decisions about the future of this unique coastal area.

Florida↗

USGS1999

The ecological condition of estuaries in the Gulf of Mexico

The Gulf of Mexico is a vast natural resource encompassing the coastal areas of western Florida, Alabama, Mississippi, Louisiana, and Texas, as well as a portion of Mexico. Many estuaries flow into the Gulf of Mexico and serve as nursery grounds for fish, habitat for a wide variety of wildlife, shipping routes, and a source of recreation. Estuarine-dependent species constitute more than 95 percent of the commercial fishery harvests from the Gulf of Mexico, and many important recreational fishery species depend on estuaries during some part of their life cycle. Gulf estuaries are diverse and productive ecosystems that provide a variety of valuable resources, including fish and shellfish, recreation, transportation, and water supply. Assessing the overall condition of Gulf of Mexico estuaries required incorporating data from other federal, state, and local monitoring programs to augment the information on ecological indicators collected by the U.S. Environmental Protection Agency’s (USEPA) Environmental Monitoring and Assessment Program (EMAP). The resulting document would provide a synthesis of the available knowledge about the condition of Gulf of Mexico estuaries. This document is intended for use by scientists and other citizens concerned with the ecological condition of estuaries, as well as by managers and lawmakers interested in the sustained use of estuaries for commercial and recreational purposes. It also addresses public concerns about the aesthetic quality of coastal areas vital to tourism and recreation. By producing this report on the ecological condition of estuaries in the Gulf of Mexico, we have taken one step in assessing the health of this environmental resource. We have produced an environmental “report card” to be used as a guide in the evaluation of management decisions and research directions. This report is organized in three parts: (1) an introduction that gives background information on the Gulf of Mexico, estuarine ecology, and the factors that impact estuaries in the gulf, (2) the main section on priority ecological indicators used to measure the condition of estuaries in the gulf and (3) an ecological report card that summarizes the data on ecological indicators and provides a rating of the condition of estuaries in each gulf state and for gulf estuaries overall. Many of the ratings were based on the percent area of estuaries in each state exhibiting degraded or adverse levels of an indicator. Eutrophication, a condition of high nutrients often resulting in low oxygen levels and other adverse effects, is an important water quality concern for estuaries along the gulf coast. The National Oceanic and Atmospheric Administration (NOAA) has compared the Gulf of Mexico to other coastal regions like the middle Atlantic and has ranked the Gulf of Mexico as having the highest number of point sources of nutrients and the highest percentage of land use devoted to agriculture. We evaluated monitoring data for nitrogen, chlorophyll, and dissolved oxygen as indicators of eutrophication. Although most of the estuaries exhibited high nitrogen or chlorophyll or low dissolved oxygen concentrations at least once during a survey, many times these conditions were observed in small rivers or bayous rather than in the entire estuary. Often, the percent area affected was low. The gulf estuaries had moderate conditions overall for nutrients and dissolved oxygen. Definite nutrient problems were observed in >25% of the estuarine area in Louisiana and Texas and definite dissolved oxygen problems were observed in Alabama. Contaminants in estuarine sediments provide evidence of the accumulation of chemicals from anthropogenic sources. We compared the concentrations of sediment contaminants to established guideline values to determine the proportion of estuarine area that could have potential adverse effects on living organisms. Although detectable levels of contaminants were measured in almost every estuary in the Gulf of Mexico, <25% of the estuarine area in all states had contaminant concentrations that exceeded these guidelines. Wetlands are integral parts of estuarine systems. Declining acreage means habitat loss that may be the result of commercial and residential development, hydrologic alterations, or dredge and fill operations. The Gulf of Mexico region contains more than 50% of the coastal wetland acreage in the U.S. and yet it also has the highest rate of coastal wetland loss. Nine of the top ten estuarine drainage areas ranked by total wetland area are in the Gulf of Mexico region. The most current estimates of total wetland loss over the past 200 years range from 41% to 54% for the gulf states. Although coastal wetlands continue to be altered or destroyed, some estimates indicate that the rate of loss has slowed. All gulf states were rated as having severe problems with wetland loss. The condition of benthic (bottom-dwelling) invertebrates, fish and shellfish, birds, and threatened and endangered species was used to evaluate the health of estuarine fauna. Degraded benthic communities inhabited <25% of the estuarine area in all gulf states except for Texas. Commercial fish and shellfish landings may be used as an indicator of population stability while fish biomarkers are used to measure the health of individuals in the population. Commercial landings of the top four fisheries (shrimp, menhaden, blue crab, and oyster) are stable in the gulf states while fish biomarkers indicate fair to poor fish health in Alabama and Texas and good fish health elsewhere. Coastal and marine bird populations appear to be in good condition throughout the gulf. Four threatened or endangered species inhabit coastal areas in the Gulf of Mexico: brown pelican, Gulf sturgeon, manatee, and Kemp’s ridley sea turtle. In general, populations of these species are in good to fair condition in the gulf states. Public health indicators include shellfish bed closures and chemicals found in edible fish tissue. Harvest of shellfish (primarily oyster in the Gulf of Mexico) is restricted or prohibited when concentrations of bacteria or other pathogens reach levels that could impair human health. The gulf states contain the most acreage of shellfish-growing waters in the U.S. but also have the most acreage restricted for harvest. All gulf states except Mississippi have >25% of their shellfish-growing waters restricted for harvest, mostly due to pollution from wastewater treatment plants or other upstream sources. Advisories may be issued that limit consumption when the concentrations of chemicals in fish tissue exceed levels known to be harmful to humans. Although seafood consumption advisories have been issued in all gulf states, the percent of the fish population with high concentrations of contaminants is relatively low in the gulf overall.

Alabama, Florida, Louisiana, Mississippi, Texas↗

USGS2021

Integrating airborne and mobile lidar data with UAV photogrammetry for rapid assessment of changing forest snow depth and cover

Forest structure and topography can influence the ecohydrologic function and resiliency to drought and changing climate. It is, therefore, important to understand how forest restoration treatments alter snowpack distribution and design the treatments accordingly. We use a combination of aerial lidar, multi-temporal terrestrial mobile lidar, and UAV photogrammetry to estimate rapidly changing snow depth and cover in northern Arizona, USA. We then examine the impact of forest structure and topography on snow depth and snow cover persistence to inform forest restoration treatments. Our results show that mobile lidar data can be used to estimate snow depth with standard errors of 8 cm when differenced with snow-off airborne lidar data. UAV-based Structure-from-Motion data can be used to estimate snow cover persistence with 92–97% overall accuracies in forested ecosystems. Random forest models indicate spatially varying importance of forest structural and topographic variables in predicting snow depth and cover persistence, when summarized at different spatial scales (from 5 m to 250 m) and with variable directional location offsets. Forest snow depth was best explained (R 2 ≈ 0.46) by canopy height metrics at summary scales of >75 m, while canopy cover was most important at summary scales of <40 m (R 2 ≈ 0.3). Snow cover persistence was best explained at very local scales by canopy cover (R 2 ≈ 0.38) and less so at larger scales (>75 m) by topographic and forest patch characteristics (R 2 ≈ 0.34). Our results demonstrate that 3-dimensional datasets are critical in rapidly characterizing changing snowpack to better understand the impacts of forest structure and topography to inform forest restoration treatment designs. The relationships observed in our study can inform currently ongoing regional-scale forest restoration in the southwest to improve forest health and resiliency.

Science of Remote Sensing↗

USGS2024

Geographic drivers of mercury entry into aquatic food webs revealed by mercury stable isotopes in dragonfly larvae

Atmospheric mercury (Hg) emissions and subsequent transport and deposition are major concerns within protected lands, including national parks, where Hg can bioaccumulate to levels detrimental to human and wildlife health. Despite this risk to biological resources, there is limited understanding of the relative importance of different Hg sources and delivery pathways within protected regions. Here, we used Hg stable isotope measurements of a single aquatic bioindicator, dragonfly larvae, to determine if these tracers can resolve spatial patterns in Hg sources, delivery mechanisms, and aquatic cycling at a national scale. Mercury isotope values in dragonfly tissues varied among habitat types (e.g., lentic, lotic, wetland) and geographic location. Photochemical-derived isotope fractionation was habitat-dependent and influenced by factors that impact light penetration directly or indirectly, including dissolved organic matter, canopy cover, and total phosphorus. Strong patterns for Δ 200 Hg emerged in the western US, highlighting the relative importance of wet deposition sources in arid regions in contrast to dry deposition delivery in forested regions. This work highlights the efficacy of dragonfly larvae as biosentinels for Hg isotope studies due to their ubiquity across freshwater ecosystems and ability to track variation in Hg sources and processing attributed to small-scale habitat and large-scale regional patterns.

Environmental Science and Technology↗

USGS2023

Reservoir stratification modulates the influence of impoundments on fish mercury concentrations along an arid land river system

Impoundment is among the most common hydrologic alterations with impacts on aquatic ecosystems that can include effects on mercury (Hg) cycling. However, landscape-scale differences in Hg bioaccumulation between reservoirs and other habitats are not well characterized nor are the processes driving these differences. We examined total Hg (THg) concentrations of Smallmouth Bass ( Micropterus dolomieu ) collected from reservoir, tailrace, and free-flowing reaches along an 863 km segment of the Snake River, USA, a semiarid river with 22 impoundments along its course. Across three size-classes (putative 1-year-old, first reproductive, and harvestable sized fish), THg concentrations in reservoirs and tailraces averaged 76% higher than those in free-flowing segments. Among reservoirs, THg concentrations were highest in reservoirs with inconsistent stratification patterns, 47% higher than annually stratified, and 144% higher than unstratified reservoirs. Fish THg concentrations in tailraces immediately downstream of stratified reservoirs were higher than those below unstratified (38–130%) or inconsistently stratified (32–79%) reservoirs. Stratification regimes influenced the exceedance of fish and human health benchmarks, with 52–80% of fish from stratifying reservoirs and downstream tailraces exceeding a human consumption benchmark, compared to 6–17% where stratification did not occur. These findings suggest that impoundment and stratification play important roles in determining the patterns of Hg exposure risk across the landscape.

Environmental Science & Technology↗