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At least 937 records · Page 52Linked to original sources

Factors affecting marsh vegetation at the Liberty Island Conservation Bank in the Cache Slough region of the Sacramento–San Joaquin Delta, California

The Liberty Island Conservation Bank (LICB) is a tidal freshwater marsh restored for the purpose of mitigating adverse effects on sensitive fish populations elsewhere in the region. The LICB was completed in 2012 and is in the northern Cache Slough region of the Sacramento–San Joaquin Delta. The wetland vegetation at the LICB is stunted and yellow-green in color (chlorotic) compared to nearby wetlands. A study was done to investigate three potential causes of the stunted and chlorotic vegetation: (1) improper grading of the marsh plain, (2) pesticide contamination from agricultural and urban inputs upstream from the site, (3) nitrogen-deficient soil, or some combination of these. Water samples were collected from channels at five sites, and soil samples were collected from four wetlands, including the LICB, during the summer of 2015. Real-time kinematic global positioning system (RTK-GPS) elevation surveys were completed at the LICB and north Little Holland Tract, a closely situated natural marsh that has similar hydrodynamics as the LICB, but contains healthy marsh vegetation. The results showed no significant differences in carbon or nitrogen content in the surface soils or in pesticides in water among the sites. The elevation survey indicated that the mean elevation of the LICB was about 26 centimeters higher than that of the north Little Holland Tract marsh. Because marsh plain elevation largely determines the hydroperiod of a marsh, these results indicated that the LICB has a hydroperiod that differs from that of neighboring north Little Holland Tract marsh. This difference in hydroperiod contributed to the lower stature and decreased vigor of wetland vegetation at the LICB. Although the LICB cannot be regraded without great expense, it could be possible to reduce the sharp angle of the marsh edge to facilitate deeper and more frequent tidal flooding along the marsh periphery. Establishing optimal elevations for restored wetlands is necessary for obtaining the full suite of ecosystem services provided by tidal wetlands. A better system of tidal benchmarks throughout the delta is needed to help restoration practitioners correctly grade the elevation of newly restored wetlands.

California↗

Use of real-time sensors to temporally characterize water quality in groundwater and surface water in Mason County, Illinois, 2017–19

The persistence of high nitrate concentrations in shallow groundwater has been well documented in the shallow glacial aquifer of Mason County, Illinois. Nitrates in groundwater can be a concern when concentrations exceed 10 milligrams per liter in drinking water. Additionally, nitrate in groundwater can contribute to surface water nitrogen loads that can cause increased algal growth. Algal growth increases oxygen consumption causing anoxic conditions as observed in the Gulf of Mexico Hypoxic Zone. From March 8, 2017, to March 31, 2019, groundwater level, continuous nitrate, dissolved oxygen, specific conductance, water temperature, and pH data were collected in a monitoring well to temporally assess changes in water quality using high frequency data. During this same period, instantaneous field measurements of water quality and groundwater levels were made in surface water and groundwater in and near Quiver Creek in the presumed groundwater flow path about 0.6 mile from the continuous monitoring well. Groundwater nitrate concentrations continuously measured in the aquifer during this time ranged from 14.7 to 23.2 milligrams per liter, whereas instantaneously measured nitrate concentrations in Quiver Creek ranged from 0.9 to 6.4 milligrams per liter. Nitrate concentrations measured by piezometer varied laterally and vertically in the Quiver Creek floodplain and beneath the stream. Irrigation and fertigation for agriculture is widely practiced in Mason County. This may seasonally affect the groundwater flow and movement as well as the persistence of nitrate in this area. Continuously and instantaneously measured nitrate concentrations and groundwater levels indicate that during the irrigation season, discharge to Quiver Creek from the shallow groundwater system may be limited. During and following periods when estimated irrigation use is highest, the low-nitrate deeper groundwater may be the dominant contributor to the Quiver Creek surface water, whereas during recharge events and when the system is not under the stress of irrigation, there is more contribution from the local and higher-nitrate shallow groundwater.

Illinois↗

National Park Service Vegetation Inventory Program, Cuyahoga Valley National Park, Ohio

The National Park Service (NPS) Vegetation Inventory Program (VIP) is an effort to classify, describe, and map existing vegetation of national park units for the NPS Natural Resource Inventory and Monitoring (I&M) Program. The NPS VIP is managed by the NPS Biological Resources Management Division and provides baseline vegetation information to the NPS Natural Resource I&M Program. The U.S. Geological Survey (USGS) Vegetation Characterization Program lends a cooperative role in the NPS VIP. The USGS Upper Midwest Environmental Sciences Center, NatureServe, and NPS Cuyahoga Valley National Park (CUVA) have completed vegetation classification and mapping of CUVA. Mappers, ecologists, and botanists collaborated to identify and describe vegetation types within the National Vegetation Classification Standard (NVCS) and to determine how best to map them by using aerial imagery. The team collected data from 221 vegetation plots within CUVA to develop detailed descriptions of vegetation types. Data from 50 verification sites were also collected to test both the key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 647 accuracy assessment (AA) sites were collected (of which 643 were used to test accuracy of the vegetation map layer). These data sets led to the identification of 45 vegetation types at the association level in the NVCS at CUVA. A total of 44 map classes were developed to map the vegetation and general land cover of CUVA, including the following: 29 map classes represent natural/semi-natural vegetation types in the NVCS, 12 map classes represent cultural vegetation (agricultural and developed) in the NVCS, and 3 map classes represent non-vegetation features (open-water bodies). Features were interpreted from viewing color-infrared digital aerial imagery dated October 2010 (during peak leaf-phenology change of trees) via digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems (GIS). The interpreted data were digitally and spatially referenced, thus making the spatial database layers usable in GIS. Polygon units were mapped to either a 0.5 ha or 0.25 ha minimum mapping unit, depending on vegetation type. A geodatabase containing various feature-class layers and tables shows the locations of vegetation types and general land cover (vegetation map), vegetation plot samples, verification sites, AA sites, project boundary extent, and aerial photographic centers. The feature-class layer and relate tables for the CUVA vegetation map provides 4,640 polygons of detailed attribute data covering 13,288.4 ha, with an average polygon size of 2.9 ha. Summary reports generated from the vegetation map layer show map classes representing natural/semi-natural types in the NVCS apply to 4,151 polygons (89.4% of polygons) and cover 11,225.0 ha (84.5%) of the map extent. Of these polygons, the map layer shows CUVA to be 74.4% forest (9,888.8 ha), 2.5% shrubland (329.7 ha), and 7.6% herbaceous vegetation cover (1,006.5 ha). Map classes representing cultural types in the NVCS apply to 435 polygons (9.4% of polygons) and cover 1,825.7 ha (13.7%) of the map extent. Map classes representing non-NVCS units (open water) apply to 54 polygons (1.2% of polygons) and cover 237.7 ha (1.8%) of the map extent. A thematic AA study was conducted of map classes representing natural/semi-natural types in the NVCS. Results present an overall accuracy of 80.7% (kappa index of 79.5%) based on data from 643 of the 647 AA sites. Most individual map-class themes exceed the NPS VIP standard of 80% with a 90% confidence interval. The CUVA vegetation mapping project delivers many geospatial and vegetation data products in hardcopy and/or digital formats. These products consist of an in-depth project report discussing methods and results, which include descriptions and a dichotomous key to vegetation types, map classification and map-class descriptions, and a contingency table showing AA results. The suite of products also includes a database of vegetation plots, verification sites, and AA sites; digital pictures of field sites; field data sheets; aerial photographic imagery; hardcopy and digital maps; and a geodatabase of vegetation types and land cover (map layer), fieldwork locations (vegetation plots, verification sites, and AA sites), aerial photographic index, project boundary, and metadata. All geospatial products are projected in Universal Transverse Mercator, Zone 17, by using the North American Datum of 1983. Information on the NPS VIP and completed park mapping projects are located on the Internet at <http://science.nature.nps.gov/im/inventory/veg> and <http://www.usgs.gov/core_science_systems/csas/vip/index.html>.

Natural Resource Technical Report↗

Sulfur contamination in the Everglades, a major control on mercury methylation

In this chapter sulfur contamination of the Everglades and its role as a major control on methylmercury (MeHg) production is examined. Sulfate concentrations over large portions of the Everglades (60% of the ecosystem) are elevated or greatly elevated compared to background conditions of <1 mg/L. Land and water management practices in south Florida are the primary reason for the high levels of sulfate loading to the Everglades. Marshes in the northern Everglades that are highly enriched in sulfate have average concentrations of 60 mg/L, but water in canals in the Everglades Agricultural Area (EAA) contain the highest concentrations of sulfate averaging 60–70 mg/L. Studies that examined the mass balance of sulfur to the Everglades have determined that the primary sources of sulfate include: sulfur currently used in agriculture, and natural and legacy agricultural sulfur released by oxidation of organic soil within the EAA. The extensive loading of sulfate to the ecosystem increases microbial sulfate reduction, the dominant microbial process driving mercury methylation and MeHg production. The biogeochemical processes linking sulfate loading and MeHg production, however, are complex. MeHg production increases as sulfate levels rise from levels <1 mg/L up to about 20 mg/L. However, production of sulfide (a byproduct of microbial sulfate reduction) starts to inhibit MeHg production above 20 mg/L. Sulfate loading to canals in the EAA has impacted the northern Everglades the most, but the Everglades canal system can transport sulfate as far as Everglades National Park (ENP), 80 km further south. Plans to deliver more water to ENP as part of restoration may increase overall sulfate loads to the southern Everglades. Reduction of sulfate loading should be a major goal of Everglades restoration because of the many negative effects of sulfate on the ecosystem. The ecosystem has been shown to respond quickly to reductions in sulfate loading, and strategies for reducing sulfate loading may produce positive outcomes for the Everglades in the near-term. Strategies for reducing sulfate loading will need to include: best management practices for agricultural use of sulfate, approaches to minimize soil oxidation in the EAA, and modifications to stormwater treatment areas to improve sulfate retention.

Florida↗

Applications of imaging spectroscopy data: A case study at Summitville, Colorado

From 1985 through 1992, the Summitville open-pit mine produced gold from lowgrade ore using cyanide heap-leach techniques, a method to extract gold whereby the ore pile is sprayed with water containing cyanide, which dissolves the minute gold grains. Environmental problems due to mining activity at Summitville include significant increases in acidic and metal-rich drainage from the site, leakage of cyanide-bearing solutions from the heap-leach pad into an underdrain system, and several surface leaks of cyanide-bearing solutions into the Wightman Fork of the Alamosa River. In general, drainage from the Summitville mine moves downslope into the Wightman Fork, a small tributary of the Alamosa River, which in turn flows east into the Terrace Reservoir before entering the agricultural lands of the San Luis Valley. The increase in the trace-metal burden of the Alamosa River watershed due to the mining activities at Summitville is of concern to farmers and fisherman, as well as Federal and State of Colorado agencies having responsibility for land stewardship. The environment of the Summitville area is a result of 1) its geologic evolution, that culminated in the formation of precious-metal mineral deposits; and 2) previous metal mining activity. Mining accentuates, accelerates, and pertubates natural geochemical processes. The development of underground workings, open pits, mill tailings, and spoil heaps and the extractive processing of ore enhances the likelihood of releasing chemicals and elements to the surrounding areas and at increased rates relative to unmined areas. Both mined and unmined mineralized areas can produce acid drainage from the formation and movement of highly acidic water rich in heavy metals. This acidic water forms principally through the chemical reaction of oxygenated surface water and shallow subsurface water with rocks that contain sulfide minerals, producing sulphuric acid. Heavy metals can be leached by the acid solution that comes in contact with mineralized rocks, a process that may be enhanced by bacterial action. The resulting fluids may be highly toxic and, when mixed with groundwater, surface water, and soil, may have harmful effects on humans, animals, and plants. Thus, understanding the geologic and hydrologic history of this area is a critical piece of the environmental puzzle in the Summitville area. The Summitville mine operators had ceased active mining and begun environmental remediation, including treatment of the heap-leach pile and installation of a water-treatment facility, when it declared bankruptcy in December 1992 and abandoned the mine site. The U.S. Environmental Protection Agency (EPA) immediately took over the Summitville site under EPA Superfund Emergency Response authority. Summitville has focused public attention on the environmental effects of modern mineral-resource development. Soon after the mine was abandoned, Federal, State, and local agencies, along with Alamosa River water users and private companies, began extensive studies at the mine site and surrounding areas. These studies included analysis of water, soil, livestock and vegetation. The role of the U.S. Geological Survey (USGS) was to provide geologic, hydrologic and agricultural information about the mine and surrounding area and to describe and evaluate the environmental condition of the Summitville mine and the downstream effects of the mine on the San Luis Valley (King 1995).

Colorado↗

An exploratory investigation of the landscape-lake interface: Land cover controls over consumer N and C isotopic composition in Lake Michigan rivermouths

Rivermouth ecosystems are areas where tributary waters mix with lentic near-shore waters and provide habitat for many Laurentian Great Lakes fish and wildlife species. Rivermouths are the interface between terrestrial activities that influence rivers and the ecologically important nearshore. Stable isotopes of nitrogen (N) and carbon (C) in consumers were measured from a range of rivermouths systems to address two questions: 1) What is the effect of rivermouth ecosystems and land cover on the isotopic composition of N available to rivermouth consumers? 2) Are rivermouth consumers composed of lake-like or river-like C? For question 1, data suggest that strong relationships between watershed agriculture and consumer N are weakened or eliminated at the rivermouth, in favor of stronger relationships between consumer N and depositional areas that may favor denitrification. For question 2, despite apparently large riverine inputs, consumers only occasionally appear river-like. More often consumers seem to incorporate large amounts of C from either the nearshore or primary production within the rivermouth itself. Rivermouths appear to be active C and N processing environments, thus necessitating their explicit incorporation into models estimating nearshore loading and possibly contributing to their importance to Great Lakes biota.

Lake Michigan↗

Modeled coastal-ocean pathways of land-sourced contaminants in the aftermath of Hurricane Florence

Extreme precipitation during Hurricane Florence, which made landfall in North Carolina in September 2018, led to breaches of hog waste lagoons, coal ash pits, and wastewater facilities. In the weeks following the storm, freshwater discharge carried pollutants, sediment, organic matter, and debris to the coastal ocean, contributing to beach closures, algae blooms, hypoxia, and other ecosystem impacts. Here, the ocean pathways of land-sourced contaminants following Hurricane Florence are investigated using the Regional Ocean Modeling System (ROMS) with a river point source with fixed water properties from a hydrologic model (WRF-Hydro) of the Cape Fear River Basin, North Carolina's largest watershed. Patterns of contaminant transport in the coastal ocean are quantified with a finite duration tracer release based on observed flooding of agricultural and industrial facilities. A suite of synthetic events also was simulated to investigate the sensitivity of the river plume transport pathways to river discharge and wind direction. The simulated Hurricane Florence discharge event led to westward (downcoast) transport of contaminants in a coastal current, along with intermittent storage and release of material in an offshore (bulge) or eastward (upcoast) region near the river mouth, modulated by alternating upwelling and downwelling winds. The river plume patterns led to a delayed onset and long duration of contaminants affecting beaches 100 km to the west, days to weeks after the storm. Maps of the onset and duration of hypothetical water quality hazards for a range of weather conditions may provide guidance to managers on the timing of swimming/shellfishing advisories and water quality sampling.

Journal of Geophysical Research: Oceans↗

Potentiometric surface of the upper Floridan Aquifer, west-central Florida, May 1995

The Floridan aquifer system consists of the Upper and Lower Floridan aquifers separated by a middle confining unit. The middle confining unit and the Lower Floridan aquifer generally contain highly mineralized water. In most reports on the hydrology of southwest Florida, the term "Floridan aquifer" has been applied to the water-bearing rocks, herin referred to as the Upper Floridan aquifer. The Upper Floridan aquifer is a productive aquifer and supplies more than 10 times the amount of water pumped from either the surfical aquifer system of the intermediate aquifer system in most of the study area (Duerr and other, 1988). This map report depicts the potentiometric surface of the Upper Floridan aquifer in May 1995. The potentipmetric surface represents to the level to which water will rise in tightly cased wells that tap a confined aquifer system. The surface is mapped by determining the altitude of water levels in a network of wells and is represented on maps by contours that connect point of equal altitude. This map represents water-level conditions near the end of the dry season when ground-water withdrawals for agricultural use are usually high. The cumulative rainfall for the study area was 2.98 inches above average for the period from June 1994 through May 1995 (Southwest Florida Water Management District, 1995)

Florida↗

Shorebirds in western North America: Late 1800s to late 1900s

Only anecdotal information is available to assess whether populations of the 47 shorebird species that breed or winter west of the Rocky Mountains changed in size or distribution during the past century. Unregulated hunting from 1870 to 1927 reduced populations of several species, at least temporarily, and was a factor in bringing the Eskimo Curlew ( Numenius borealis ) close to extinction. Large scale transformation of native grasslands and wetlands for agriculture and other purposes resulted in population declines and nesting range contractions of several temperate-zone breeders. In general, upland species were affected more than wetland species, breeding ranges contracted westward, and alteration of breeding habitat was the factor most responsible for range contractions and population declines. A ranking system assessing shorebird susceptibility to habitat alteration also predicted temperate breeders to be among the most vulnerable species to environmental change. The few estimates for current population sizes of western North American shorebirds range from fewer than 50 Eskimo Curlews to a few million Western Sandpipers ( Calidris mauri ), the most abundant species. Concentrations of at least 1000 shorebirds occur on migration at over 120 western North American sites and of 100,000 to 1,000,000 shorebirds at 18 sites. Whether populations are limited by conditions on breeding, wintering or migration ranges is unknown for most species. Expansion of ongoing programs coupled with economical new census efforts could be useful for monitoring the majority of western North American shorebirds during the next century.

Studies in Avian Biology↗

Simulated effects of alternative withdrawal strategies on groundwater flow in the unconfined Kirkwood-Cohansey aquifer system, the Rio Grande water-bearing zone, and the Atlantic City 800-foot sand in the Great Egg Harbor and Mullica River Basins, New Jersey

Groundwater is essential for water supply and plays a critical role in maintaining the environmental health of freshwater and estuarine ecosystems in the Atlantic Coastal basins of New Jersey. The unconfined Kirkwood-Cohansey aquifer system and the confined Atlantic City 800-foot sand are major sources of groundwater in the area, and each faces different water-supply concerns. The U.S. Geological Survey (USGS), in cooperation with the New Jersey Department of Environmental Protection (NJDEP), conducted a study to simulate the effects of withdrawals in the Kirkwood-Cohansey aquifer system, the Atlantic City 800-foot sand, and the Rio Grande water-bearing zone and to evaluate potential scenarios. The study area encompasses Atlantic County and parts of Burlington, Camden, Gloucester, Ocean, Cape May, and Cumberland Counties. The major hydrogeologic units affecting water supply in the study area are the surficial Kirkwood-Cohansey aquifer system, a thick diatomaceous clay confining unit in the upper part of Kirkwood Formation; the Rio Grande water-bearing zone; and the Atlantic City 800-foot sand of the Kirkwood Formation. Hydrogeologic data from 18 aquifer tests and specific capacity data from 230 wells were analyzed to provide horizontal hydraulic conductivity of the aquifers. Groundwater withdrawals are greatest from the Kirkwood-Cohansey aquifer system, and 65 percent of the water is used for public supply. Groundwater withdrawals from the Atlantic City 800-foot sand are about half those from the Kirkwood-Cohansey aquifer system. Ninety-five percent of the withdrawals from the Atlantic City 800-foot sand is used for public supply. Data from six streamgaging stations and 51 low-flow partial record sites were used to estimate base flow in the area. Base flow ranges from 60 to 92 percent of streamflow. A groundwater flow model of the Kirkwood-Cohansey aquifer system, the Rio Grande water-bearing zone, and the Atlantic City 800-foot sand was developed and calibrated using water-level data from 148 wells and base-flow data from 22 gaging or low-flow partial record stations. The Kirkwood-Cohansey aquifer system within the Great Egg Harbor River and the Mullica River Basins was simulated on a monthly basis from 1998 through 2006. An existing regional model of the New Jersey Coastal Plain was revised to provide boundary conditions for the Great Egg Harbor and Mullica River Basin model (referred to as the Great Egg-Mullica model). In the Great Egg-Mullica model, monthly groundwater recharge rates used in the model ranged from 10-15 inches per year in 2001 to 20-25 inches per year in 2005. The mean-absolute error for 10 of the 14 long-term hydrographs used in model calibration was less than 5 ft. Groundwater flow budgets for the Great Egg-Mullica model calibration periods, May 2005 and September 2006, and for the entire model calibration period 1998 to 2006, showed that nearly 70 percent of the water entering the Atlantic City 800-foot sand came from the horizontal connection with the Kirkwood-Cohansey aquifer system in updip areas. The groundwater flow model was used to simulate scenarios under three possible conditions: average 1998 to 2006 withdrawals (Average scenario), full-allocation withdrawals (Full Allocation scenario), and projected 2050-demand withdrawals (2050 Demand scenario). Withdrawals in the Full Allocation scenario are nearly twice the withdrawals from the Average scenario, primarily because of the potential for large agricultural withdrawals if all allocations are used. Withdrawals for the 2050 Demand scenario are about 50 percent greater than those for the Average scenario, primarily due to expected increases in withdrawals for public supply. Monthly base-flow depletion criteria were determined using the Low-Flow Margin method, currently under consideration by NJDEP, to estimate available water on an annual basis at the Hydrologic Unit Code 11 (HUC11) level and to determine whether a water-supply deficit exists. Simulations of various groundwater-withdrawal scenarios were made using the calibrated model, and results were compared with baseline conditions (no withdrawals) to determine where and when base-flow deficits may be occurring and may be expected to occur in the future. Scenarios were simulated to assess base-flow depletion that could occur from different groundwater-withdrawal situations. In the Average scenario, deficits occurred in 7 of the 14 subbasins. In the Full Allocation scenario, deficits occurred in 11 of the subbasins. In the 2050 Demand scenario, deficits occurred in 9 of the 14 subbasins. The largest deficits occurred in the Absecon Creek subbasin because the base-flow depletion criteria for this subbasin is small due to the surface-water diversions that are already occurring there and because existing groundwater withdrawals in the subbasin have resulted in base-flow depletion under current (1998-2006) conditions. Three adjusted scenarios, variations of the Average, Full Allocation, and 2050 Demand scenarios, were simulated; for the adjusted scenarios, the withdrawals were modified in stages with the intent to successively eliminate or minimize the base-flow deficits. Modifications included shifting withdrawals to a deeper part of the Kirkwood-Cohansey aquifer system, implementing seasonal conjunctive use of shallow and deep aquifers, and specifying reductions in withdrawals within a HUC11 subbasin in deficit. The adjusted scenarios are intended to show the relative effectiveness of each of the three approaches in reducing the deficits. Most of the deficits under the Average, Full Allocation, and 2050 Demand scenarios were eliminated by reductions in withdrawals or allocations. Shifting withdrawals to a deeper part of the Kirkwood-Cohansey aquifer system or seasonal conjunctive use did not eliminate deficits for any subbasin. Reductions in withdrawals accounted for more than 95 percent of the total reduction of deficits in all but one subbasin.

New Jersey↗

Drain tiles and groundwater resources: Understanding the relations

Executive Summary Drainage for agricultural production over the past 150 years has been an integral component of human-driven change to Minnesota’s rural landscapes. Benefits of drainage Historically, poorly drained soils across much of the State would often remain saturated or flooded after spring snowmelt, preventing timely farm operations such as tilling and planting crops (Arneman, 1963). Installation of agricultural drainage, both surface ditches and subsurface drainage, accelerated transport of water off farm fields and imparted producers higher crop yields (Beauchamp, 1987; Stoner and others, 1993). Agricultural drainage offered many other benefits such as preventing crop drown out, aerating the soil profile for improved plant growth, limiting surface runoff and soil erosion, and allowing farmers better access to croplands (Fausey and others, 1987). Without agricultural drainage on much of Minnesota’s croplands, it would have been difficult to realize high enough crop yields to remain economically viable. Environmental concerns While drainage of Minnesota croplands provided the benefits mentioned above, several environmental concerns result. These include wetland loss, degradation of downstream water quality, and reduced [potential for] recharge. Early agricultural drainage efforts (pre-20th century) led to the disappearance of much of Minnesota’s natural wetlands. Increased focus on preventing or mitigating wetland loss over the last 50 years has helped curtail further losses, even as agricultural drainage proceeds. Prior to establishment of Minnesota statehood, wetlands accounted for more than 10 million acres in Minnesota, including prairie wetlands, peatlands, and forest wetlands that comprised approximately 19 percent of the total land area (Palmer, 1915; King, 1980). In 2018, only half of Minnesota’s pre-settlement wetlands remain, mostly in parts of the State that have not experienced widespread drainage, such as northern Minnesota. Water-quality monitoring has shown that agricultural drainage, in particular the practice of subsurface drainage, provides a direct flow path for nutrient (nitrogen and soluble phosphorus) losses to surface water resources. The negative consequences of agricultural drainage on surface water quality are well documented (for example, Dinnes and others, 2002; Kladivko and others, 2004; Richards and others, 2008; Rozemeijer and others, 2010; Schottler and others, 2013). Agricultural basins with a high percentage of agricultural drainage have been implicated as part of the cause of the Gulf of Mexico hypoxia zone due to excessive nitrogen export (Goolsby and Battaglin, 2001; Randall and Mulla, 2001). The connection of hydrological effects of agricultural subsurface drainage on groundwater recharge and aquifers, on the other hand, has not been well-established. Agricultural subsurface drainage intercepts infiltrating water below croplands and directly discharges the water to nearby surface waters. However, the size of the water balance shift from drained water that would have evapotranspired or run off the land to drained water that would recharge underlying aquifers has been poorly characterized (Schuh, 2008). Drain Tiles and Groundwater Given the poor accounting of subsurface drainage effects on groundwater resources, the Minnesota Ground Water Association (MGWA) deemed it imperative that we document these effects so that groundwater resources in agricultural regions with substantial drainage can be effectively managed. This white paper documents the relations of drain tiles and groundwater resources and discusses the historical significance of agricultural drainage practices, the recognized positive benefits and potential negative consequences of agricultural drainage practices, and the gaps in understanding of the connections between agricultural drainage and groundwater resources. The major messages emerged from the findings of this white paper are: Complex history. Minnesota has a long history of agricultural drainage, spanning over 150 years. Agricultural drainage, and the eventual widespread usage of subsurface drainage, can be separated into at least four distinct periods of time: (a) early drainage to get water off the land, pre-20th century; (b) the boom and bust era (1900-1945); (c) postwar resurgence of subsurface drainage and early conservation efforts (1945-1960); and, (d) emergence of the environmental movement (1960 to present). The State’s regulatory framework that both allowed for drainage and controlled its usage during these periods is complicated and has been governed by a patchwork of both State and Federal statutes. Drainage Provinces. This white paper advances the concept of tile drainage provinces to aid in the discussion of regional differences in subsurface drainage and its overall effect on groundwater resources. Built upon the concept of groundwater provinces (Minnesota Department of Natural Resources, 2001), three distinct tile drainage provinces were conceptualized: (1) the Southeastern Province; (2) the SouthCentral Province; and, (3) the Western Province. The distinct geology and the soils that developed in these regions have implications for each region’s subsurface drainage density and the potential implications for groundwater. Knowledge gaps. Several critical knowledge gaps are identified in this paper, creating opportunities for further research to improve our understanding for better managed water resources: Extent of drainage is unknown. Direct estimates of the extent of subsurface drainage do not exist in Minnesota. However, several indirect methods have been utilized to estimate subsurface drainage, from the field-scale to countylevel through the use of geographic information system (GIS) analysis and aerial photography. Based on a 2012 U.S. Geological Survey estimate of subsurface drainage extent (Nakagaki and Wieczorek, 2016), about 21% of the land area in Minnesota has some density of subsurface drainage. Effect of drainage on underlying aquifers is unknown. A basic understanding of unconfined and confined aquifers and their recharge is necessary to connect any hydrological effects from agricultural drainage to groundwater. The basic goal of subsurface drainage to efficiently drain saturated soils clearly alters the water balance in croplands. However, its overall effect on groundwater resources has been poorly characterized, and is in large part determined by the geology below drained areas and the arrangement of underlying aquifers. Water balance shifts. An improved understanding of historical water balance shifts from pre- to post-drainage periods is necessary to understand long-term implications on net groundwater recharge. Also, more direct field-scale studies and indirect modeling studies are needed to characterize water budgets for fields with subsurface drainage.

Minnesota↗

Modelling the distribution of domestic ducks in Monsoon Asia

Domestic ducks are considered to be an important reservoir of highly pathogenic avian influenza (HPAI), as shown by a number of geospatial studies in which they have been identified as a significant risk factor associated with disease presence. Despite their importance in HPAI epidemiology, their large-scale distribution in Monsoon Asia is poorly understood. In this study, we created a spatial database of domestic duck census data in Asia and used it to train statistical distribution models for domestic duck distributions at a spatial resolution of 1 km. The method was based on a modelling framework used by the Food and Agriculture Organisation to produce the Gridded Livestock of the World (GLW) database, and relies on stratified regression models between domestic duck densities and a set of agro-ecological explanatory variables. We evaluated different ways of stratifying the analysis and of combining the prediction to optimize the goodness of fit of the predictions. We found that domestic duck density could be predicted with reasonable accuracy (mean RMSE and correlation coefficient between log-transformed observed and predicted densities being 0.58 and 0.80, respectively), using a stratification based on livestock production systems. We tested the use of artificially degraded data on duck distributions in Thailand and Vietnam as training data, and compared the modelled outputs with the original high-resolution data. This showed, for these two countries at least, that these approaches could be used to accurately disaggregate provincial level (administrative level 1) statistical data to provide high resolution model distributions.

Agriculture, Ecosystems and Environment↗

Famine Early Warning System Network (FEWS NET)

The FEWS NET mission is to identify potentially food-insecure conditions early through the provision of timely and analytical hazard and vulnerability information. U.S. Government decision-makers act on this information to authorize mitigation and response activities. The U.S. Geological Survey (USGS) FEWS NET provides tools and data for monitoring and forecasting the incidence of drought and flooding to identify shocks to the food supply system that could lead to famine. Historically focused on Africa, the scope of the network has expanded to be global coverage. FEWS NET implementing partners include the USGS, National Aeronautics and Space Administration (NASA), National Oceanic and Atmospheric Administration (NOAA), United States Agency for International Development (USAID), United States Department of Agriculture (USDA), and Chemonics International.

Fact Sheet↗

Trace elements in bed sediments of the San Joaquin River and its tributary streams, California, 1985

Bed sediments were sampled at 24 sites on the San Joaquin River, California and its tributaries in October 1985 to assess the distribution of trace elements and factors affecting their concentrations. The proportion of less than 62-micrometer sediment was significantly (alpha=0.05) correlated with organic-carbon concentrations. Bed sediments from tributaries originating in the Sierra Nevada were much coarser than sediments in streams draining the Coast Range and western valley. Selenium concentrations in water have been measured. Interrelations among trace elements were examined using principal component analysis. 57% of the variance was accounted for in the first two principal components, which together show a distinct separation between sites dominated by Coast Range sediments and sites dominated by Sierra Nevada sediments. The third and fourth components accounted for 21% of the variance and distinguished the mixed-source sediments of the intermittent upper San Joaquin River from other parts of the river system. Generally, elements in bed sediments of the San Joaquin River and its tributaries were similar in concentration to elements in San Joaquin Valley soils, and concentrations were far below hazardous waste criteria. Concentrations were lower than in sediments from some polluted urban rivers and water more comparable to other rural agricultural rivers. (USGS)

Water-Resources Investigations Report↗

Covariance of bacterioplankton composition and environmental variables in a temperate delta system

We examined seasonal and spatial variation in bacterioplankton composition in the Sacramento-San Joaquin River Delta (CA) using terminal restriction fragment length polymorphism (T-RFLP) analysis. Cloned 16S rRNA genes from this system were used for putative identification of taxa dominating the T-RFLP profiles. Both cloning and T-RFLP analysis indicated that Actinobacteria , Verrucomicrobia , Cytophaga-Flavobacterium and Proteobacteria were the most abundant bacterioplankton groups in the Delta. Despite the broad variety of sampled habitats (deep water channels, lakes, marshes, agricultural drains, freshwater and brackish areas), and the spatial and temporal differences in hydrology, temperature and water chemistry among the sampling campaigns, T-RFLP electropherograms from all samples were similar, indicating that the same bacterioplankton phylotypes dominated in the various habitats of the Delta throughout the year. However, principal component analysis (PCA) and partial least-squares regression (PLS) of T-RFLP profiles revealed consistent grouping of samples on a seasonal, but not a spatial, basis. b- Proteobacteria related to Ralstonia , Actinobacteria related to Microthrix , and b- Proteobacteria identical to the environmental Clone LD12 had the highest relative abundance in summer/fall T-RFLP profiles and were associated with low river flow, high pH, and a number of optical and chemical characteristics of dissolved organic carbon (DOC) indicative of an increased proportion of phytoplankton-produced organic material as opposed to allochthonous, terrestrially derived organic material. On the other hand, Geobacter -related b- Proteobacteria showed a relative increase in abundance in T-RFLP analysis during winter/spring, and probably were washed out from watershed soils or sediment. Various phylotypes associated with the same phylogenetic division, based on tentative identification of T-RFLP fragments, exhibited diverse seasonal patterns, suggesting that ecological roles of Delta bacterioplankton were partitioned at the genus or species level.

Aquatic Microbial Ecology↗

Physical setting: Chapter 1 in Initial biotic survey of Lisbon Bottom, Big Muddy National Fish and Wildlife Refuge

Lisbon Bottom consists of approximately 875 ha of river bottom along the Missouri River in Howard County, Missouri, from approximately river mile (RM) 213 to RM 219. As used in this report, the Lisbon Bottom area also includes the main channel of the Missouri River adjacent to the Lisbon Bottom and portions of the adjacent flood plain in Saline County, Missouri. Before regulation and structuring of the Missouri River, riverine areas like Lisbon Bottom were shifting mosaics of dynamic habitat patches that were created and maintained by hydrologic and geomorphic processes. Flow regulation, navigation structures, and bank-stabilization projects isolated Lisbon Bottom from the river by decreasing the magnitude and frequency with which hydrologic and geomorphic processes could alter habitat characteristics. The flood of 1993 breached agricultural levees around Lisbon Bottom, thereby reestablishing a connection to the Missouri River. Although still affected by flow regulation and the requirement to maintain navigation in the main channel, Lisbon Bottom presents the opportunity to study ecosystem processes and dynamic geomorphology in a setting that more closely mimics the natural riverine system than any other site on the navigable Lower Missouri River. The purpose of this chapter is to describe the physical setting and processes that structure the riverine ecosystem of Lisbon Bottom and similar areas of the Lower Missouri River. The description compiles available information on temporal and spatial changes at the site, including the history of channel changes and hydrology.

Missouri↗

Wildlife mortality attributed to organophosphorus and carbamate pesticides

Organophosphorus (OP) and carbamate pesticides are used widely in agricultural and residential applications as insecticides, herbicides, fungicides, and rodenticides. This family of chemicals replaced the organochlorine pesticides banned for use in the United States in the 1970's. Unlike organochlorine pesticides, which are long-lived in the environment and cause biological damage when they accumulate in an organism's system over time, OP and carbamate pesticides are short-lived in the environment and fast-acting on their "target pest." Direct mortality of wildlife from organochlorine pesticides was uncommon (Hayes and Wayland 1975); however, mortality is the primary documented effect on wildlife from OP and carbamate pesticides (Grue et al. 1983). Organophosphorus and carbamate pesticide toxicity is not specific to a target "pest," and lethal effects are seen in nontarget organisms; birds appear to be the most sensitive class of animals affected by these pesticides. Organophosphorus and carbamate pesticides primarily affect the nervous system by inhibiting acetylcholinesterase (AChE) enzyme activity. This enzyme's main function in the nervous system is to break down the neurotransmitter acetylcholine. When AChE is altered by OP and carbamate pesticides, it cannot perform this breakdown function and acetylcholine accumulates. Acetylcholine accumulation increases nerve impulse transmission and leads to nerve exhaustion and, ultimately, failure of the nervous system. When the nervous system fails, muscles do not receive the electrical input they require to move. The respiratory muscles are the most critical muscle group affected, and respiratory paralysis is often the immediate cause of death.

Book chapter↗

Estimated water use and availability in the South Coastal Drainage Basin, southern Rhode Island, 1995-99

The South Coastal Drainage Basin includes approximately 59.14 square miles in southern Rhode Island. The basin was divided into three subbasins to assess the water use and availability: the Saugatucket, Point Judith Pond, and the Southwestern Coastal Drainage subbasins. Because there is limited information on the ground-water system in this basin, the water use and availability evaluations for these subbasins were derived from delineated surface-water drainage areas. An assessment was completed to estimate water withdrawals, use, and return flow over a 5-year study period from 1995 through 1999 in the basin. During the study period, one major water supplier in the basin withdrew an average of 0.389 million gallons per day from the sand and gravel deposits. Most of the potable water is imported (about 2.152 million gallons per day) from the adjacent Pawcatuck Basin to the northwest. The estimated water withdrawals from the minor water suppliers, which are all in Charlestown, during the study period were 0.064 million gallons per day. The self-supplied domestic, industrial, commercial, and agricultural withdrawals from the basin were 0.574 million gallons per day. Water use in the basin was 2.874 million gallons per day. The average return flow in the basin was 1.190 million gallons per day, which was entirely from self-disposed water users. In this basin, wastewater from service collection areas was exported (about 1.139 million gallons per day) to the Narragansett Bay Drainage Basin for treatment and discharge. During times of little to no recharge, in the form of precipitation, the surface- and ground-water system flows are from storage primarily in the stratified sand and gravel deposits, although there is flow moving through the till deposits at a slower rate. The ground water discharging to the streams, during times of little to no precipitation, is referred to as base flow. The PART program, a computerized hydrograph-separation application, was used at the selected index stream-gaging station to determine water availability based on the 75th, 50th, and 25th percentiles of the total base flow, the base flow minus the 7-day, 10-year flow criteria, and the base flow minus the Aquatic Base Flow criteria at the index station. The base flow calculated at the selected index station was subdivided into two rates on the basis of the percent contributions from sandand-gravel and till deposits. There has been no long-term collection of surface-water data in this study area and therefore an index stream-gaging station in the Pawcatuck Basin was used for the South Coastal Drainage Basin. The Pawcatuck River at Wood River Junction was chosen as the index station for the South Coastal Drainage Basin because the station is representative of the basin on the basis of the percentage of sand and gravel deposits and the average extent of thickness of the sand and gravel deposits. The baseflow contributions from sand and gravel deposits at the index station were computed for June, July, August, and September, and applied to the percentage of surficial deposits at the index station. The base-flow contributions were converted to a per unit area at the station for the till, and for the sand and gravel deposits and applied to the South Coastal Drainage Basin to determine the water availability. The results from the index station, the Pawcatuck River at Wood River Junction streamgaging station, were lowest for the summer in September. To determine water availability in the South Coastal Drainage Basin, the per unit area of the estimated base flows from sand and gravel deposits and till deposits at the index station was applied to the subbasin areas, and the resultant flows were lowest in September. The base flow at the 75th percentile in the basin was 56.95 million gallons per day in June; 32.78 million gallons per day in July; 30.22 million gallons per day in August; and 23.94 million gallons per day in September. The base flow at the 50th percentile in the basin was 44.59 million gallons per day in June; 25.31 million gallons per day in July; 20.75 million gallons per day in August; and 17.01 million gallons per day in September. The base flow at the 25th percentile in the basin was 35.52 million gallons per day in June; 20.40 million gallons per day in July; 14.94 million gallons per day in August; and 12.00 million gallons per day in September. There are some limitations in the application of this method along the coast, because saltwater intrusion can change the amount of fresh ground-water discharge to the coastal saltwater ecosystem. A ground-water system analysis evaluating these variances would provide additional information to assess the water availability along the coast. Because water withdrawals and use are greater during the summer than other times of the year, water availability in June, July, August, and September was assessed and compared to water withdrawals in the basin. The ratios were calculated by dividing the water withdrawals by the water-availability flow scenarios at the 75th, 50th, and 25th percentiles for the basin, which are based on total water available from base-flow contributions from till and sand and gravel deposits in the basin. The closer the ratio is to one, the closer the withdrawals are to the estimated water available, and the net water available decreases. For the study period, the withdrawals in July were higher than the other summer months. The ratios in the basin for the base-flow scenario, with no low-flow criteria removed, ranged from 0.029 to 0.046 in June; 0.059 to 0.094 in July; 0.050 to 0.100 in August; and 0.040 to 0.079 in September. A long-term hydrologic budget (60 years) was calculated for the South Coastal Drainage Basin to identify and assess the basin and subbasin inflow and outflows. This coastal basin is different than other study areas because all three of the subbasins drain into salt water, Point Judith Point, Long Island Sound, and Rhode Island Sound towards the Atlantic Ocean, or internally within the subbasin to the salt ponds. The hydrologic budgets, therefore, were compiled by subbasin. The basin hydrologic budget is the sum of the three subbasin budgets. Unlike a river subbasin drainage system, however, the estimated streamflows out of the subbasins were also considered outflows from the basin. The water withdrawals and return flows used in the budget were from 1995 through 1999. For the hydrologic budget, it was assumed that inflow equals outflow, where the estimated inflows were from precipitation and wastewater-return flow, and the estimated outflows were from evapotranspiration, streamflow, and water withdrawals.

Rhode Island↗