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USGS2023

Achieving success with RISE: A widely implementable, iterative, structured process for mastering interdisciplinary team science collaborations

Scientific experts from different disciplines often struggle to mesh their specialized perspectives into the shared mindset that is needed to address difficult and persistent environmental, ecological, and societal problems. Many traditional graduate programs provide excellent research and technical skill training. However, these programs often do not teach a systematic way to learn team skills, nor do they offer a protocol for identifying and tackling increasingly integrated interdisciplinary (among disciplines) and transdisciplinary (among researchers and stakeholders) questions. As a result, professionals trained in traditional graduate programs (e.g., current graduate students and employed practitioners) may not have all of the collaborative skills needed to advance solutions to difficult scientific problems. In the present article, we illustrate a tractable, widely implementable structured process called RISE that accelerates the development of these missing skills. The RISE process (Route to Identifying, learning, and practicing interdisciplinary and transdisciplinary team Skills to address difficult Environmental problems) can be used by diverse teams as a tool for research, professional interactions, or training. RISE helps professionals with different expertise learn from each other by repeatedly asking team-developed questions that are tested using an interactive quantitative tool (e.g., agent-based models, machine learning, case studies) applied to a shared problem framework and data set. Outputs from the quantitative tool are then discussed and interpreted as a team, considering all team members’ perspectives, disciplines, and expertise. After this synthesis, RISE is repeated with new questions that the team jointly identified in earlier data interpretation discussions. As a result, individual perspectives, originally informed by disciplinary training, are complemented by a shared understanding of team function and elevated interdisciplinary knowledge.

BioScience↗

USGS2014

Low-altitude photographic transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013

During July 16–18, 2013, low-level photography flights were conducted (with a Cessna 185 with floats and a Cessna 206 with tundra tires) over the five administrative units of the National Park Service Arctic Network (Bering Land Bridge National Preserve, Cape Krusenstern National Monument, Gates of the Arctic National Park and Preserve, Kobuk Valley National Park, and Noatak National Preserve) and the U.S. Fish and Wildlife Service’s Selawik National Wildlife Refuge in northwest Alaska, to provide images of current conditions and prevalence of land-cover types as a baseline for measuring future change, and to complement the existing grid-based sample photography of the region. Total flight time was 17 hours, 46 minutes, and total flight distance was 2,590 kilometers, at a mean altitude of about 300 meters above ground level. A total of 19,167 photographs were taken from five digital camera systems: 1. A Drift® HD-170 (focal length 5.00 mm); 2. A GoPro® Hero3 Black Edition (focal length 2.77 mm); 3. A Panasonic® Lumix DMC-FZ200 (24× superzoom with variable focal length); 4. A Panasonic® Lumix DMC-SZ7 (10x superzoom with variable focal length); and 5. A Canon® Rebel 3Ti with a Sigma zoom lens (18–200 mm focal length). The Drift® HD-170 and GoPro® Hero3 cameras were secured to the struts and underwing for nadir (direct downward) imaging. The Panasonic® and Canon® cameras were each hand-held for oblique-angle landscape images, shooting through the airplanes’ windows, targeting both general landscape conditions as well as landscape features of special interest, such as tundra fire scars and landslips. The Drift® and GoPro® cameras each were set for time-lapse photography at 5-second intervals for overlapping coverage. Photographs from all cameras (100 percent .jpg format) were date- and time-synchronized to geographic positioning system waypoints taken during the flights, also at 5-second intervals, providing precise geotagging (latitude-longitude) of all files. All photographs were adjusted for color saturation and gamma, and nadir photographs were corrected for lens distortion for the Drift® and GoPro® cameras’ 170° wide-angle distortion. EXIF (exchangeable image file format) data on camera settings and geotagging were extracted into spreadsheet databases. An additional 1 hour, 20 minutes, and 43 seconds of high-resolution videos were recorded at 60 frames per second with the GoPro® camera along selected transect segments, and also were image-adjusted and corrected for lens distortion. Geotagged locations of 12,395 nadir photographs from the Drift® and GoPro® cameras were overlayed in a geographic information system (ArcMap 10.0) onto a map of 44 ecotypes (land- and water-cover types) of the Arctic Network study area. Presence and area of each ecotype occurring within a geographic information system window centered on the location of each photograph were recorded and included in the spreadsheet databases. All original and adjusted photographs, videos, geographic positioning system flight tracks, and photograph databases are available by contacting ascweb@usgs.gov.

Alaska↗

USGS2021

An integrated path for spatial capture–recapture and animal movement modeling

Ecologists and conservation biologists increasingly rely on spatial capture–recapture (SCR) and movement modeling to study animal populations. Historically, SCR has focused on population-level processes (e.g., vital rates, abundance, density, and distribution), whereas animal movement modeling has focused on the behavior of individuals (e.g., activity budgets, resource selection, migration). Even though animal movement is clearly a driver of population-level patterns and dynamics, technical and conceptual developments to date have not forged a firm link between the two fields. Instead, movement modeling has typically focused on the individual level without providing a coherent scaling from individual- to population-level processes, whereas SCR has typically focused on the population level while greatly simplifying the movement processes that give rise to the observations underlying these models. In our view, the integration of SCR and animal movement modeling has tremendous potential for allowing ecologists to scale up from individuals to populations and advancing the types of inferences that can be made at the intersection of population, movement, and landscape ecology. Properly accounting for complex animal movement processes can also potentially reduce bias in estimators of population-level parameters, thereby improving inferences that are critical for species conservation and management. This introductory article to the Special Feature reviews recent advances in SCR and animal movement modeling, establishes a common notation, highlights potential advantages of linking individual-level (Lagrangian) movements to population-level (Eulerian) processes, and outlines a general conceptual framework for the integration of movement and SCR models. We then identify important avenues for future research, including key challenges and potential pitfalls in the developments and applications that lie ahead.

Ecology↗

USGS2006

The ionospheric impact on GPS performance in southern polar region

The primary objective of this paper is to present the results of the study of the effects of varying ionospheric conditions on the GPS signal tracking in the southern polar region. In the first stage of this study, the data collected by the OSU/USGS team in October-November 2003 within the TAMDEF (Transantarctic Mountains Deformation) network were used together with some IGS Antarctic stations to study the effect of severe ionospheric storms on GPS hardware. Note that TAMDEF is a joint USGS/OSU project with the primary objective of measuring crustal motion in the Transantarctic Mountains of Southern Victoria Land using GPS techniques. This study included ten Antarctic stations equipped with different dual-frequency GPS hardware, and the data were evaluated for two 24-hour periods of severe ionospheric storm (2003/10/29) and moderate ionospheric conditions (minor storm of 2003/11/11). The results of this study were presented at the LAG Assembly in Cairns, Australia (Grejner-Brzezinska et al., 2005). Additional tests, in a more controlled environment, were carried out at the US Antarctic station, McMurdo, between January 10 and February 6, 2006, under varying ionospheric conditions, where several different types of receivers were connected to the same antenna located on the rooftop of the Crary Laboratory (the primary test site). In this scenario, each antenna was subject to identical ionospheric effects during each day of the test, and no spatial decorrelation effects were present, as seen in the previous study, due to the spatial separation of the receivers tested. It should be noted, however, that no moderate or severe ionospheric storms occurred during the experiment, so, unfortunately, this type of conditions was not tested here. The test was repeated with different receivers connected to different antenna types; a total of four 5-day sessions were carried out. The following receiver types were used at the primary site: Trimble 5700, Ashtech Z-Surveyor, JNS Euro-80 and Novatel DL-4, with the following antennas: Trimble Zephyr Geodetic, Ashtech D/M and Ashtech E/M chokering. In addition, data collected by the MCM4 IGS station, MCMD UNAVCO station, and CRAR USGS station, all located within 300 m from the primary test site, were used in the analyses. These stations were equipped with the following receiver/antenna combinations: ADA SNR-12/AOAD/MJT chokering (MCM4), Trimble NETRS/AOAD/MJT chokering (MCMD), and TPS ODYSEY_E/JPSREGANT_DD_E (CRAR). The UNAVCO TEQC software was used to carry out the analyses. Depending on the data sampling rate and the mask angle, the expected numbers of observations per receiver/satellite were compared to the actual number of measurements collected during the ionospheric events, with a special emphasis on L2 data. A total number of cycle slips and losses of lock were computed and compared among the hardware types. The results presented here indicate that there is no significant effects on the GPS receivers during minor ionospheric storms (Kp<5). However, the results reported in ibid, indicate significant differences in the hardware performance under severe ionospheric storms. Thus, careful hardware selection is needed to assure data quality/continuity when observations may be affected by severe ionospheric disturbances, while under calm to minor ionospheric activity level there is no significant difference in performance among the hardware tested here.

Conference Paper↗

USGS2000

Characterizing Manatee habitat use and seagrass grazing in Florida and Puerto Rico: Implications for conservation and management

The Indian River Lagoon on the Atlantic coast of Florida, USA, and the east coast of Puerto Rico provide contrasting environments in which the endangered West Indian Manatee Trichechus manatus experiences different thermal regimes and seagrass communities. We compare Manatee feeding behaviour in these two regions, examine the ecological effects of Manatee grazing on a seagrass community in the Indian River Lagoon, describe the utility of aerial surveys, radio tracking, and seagrass mapping to study Manatee feeding patterns, and develop hypotheses on sirenian feeding strategies in temperate and tropical seagrass communities. In both the Indian River Lagoon and Puerto Rico, Manatees were typically observed grazing in water depths = 2.0 m and more frequently on the most abundant seagrasses present in the community: Halodule wrightii in the Indian River Lagoon and Thalassia testudinum in eastern Puerto Rico. Where both H. wrightii and Syringodium filiforme were consumed in the Indian River Lagoon, Manatees tended to remove more S. filiforme than H. wrightii rhizome + root biomass. Even though 80 to 95% of the short-shoot biomass and 50 to 67% of the rhizome + root biomass were removed, grazed patches of H. wrightii and S. filiforme recovered significantly between February and August. H. wrightii may be both more resistant and resilient than S. filiforme to the impacts of Manatee grazing. Despite the significantly greater abundance of T. testudinum in Puerto Rico, Manatees exhibited selective feeding by returning to specific sites with abundant H. wrightii. They also appeared to feed selectively on T. testudinum shoots associated with clumps of the calcareous alga Halimeda opuntia. We hypothesize that Florida Manatees are less specialized seagrass grazers than Manatees in tropical regions like Puerto Rico. Continued research on Manatee grazing ecology in temperate to tropical seagrass communities will enable better protection and management of these vital and unique marine resources.

Florida↗

USGS2018

Macroecological patterns of sexual size dimorphism in turtles of the world

Sexual size dimorphism (SSD) is a well-documented phenomenon in both plants and animals; however, the ecological and evolutionary mechanisms that drive and maintain SSD patterns across geographic space at regional and global scales are understudied, especially for reptiles. Our goal was to examine geographic variation of turtle SSD and to explore ecological and environmental correlates using phylogenetic comparative methods. We use published body size data on 135 species from nine turtle families to examine how geographic patterns and the evolution of SSD are influenced by habitat specialization, climate (annual mean temperature and annual precipitation) and climate variability, latitude, or a combination of these predictor variables. We found that geographic variation, magnitude and direction of turtle SSD are best explained by habitat association, annual temperature variance and annual precipitation. Use of semi-aquatic and terrestrial habitats was associated with male-biased SSD, whereas use of aquatic habitat was associated with female-biased SSD. Our results also suggest that greater temperature variability is associated with female-biased SSD. In contrast, wetter climates are associated with male-biased SSD compared with arid climates that are associated with female-biased SSD. We also show support for a global latitudinal trend in SSD, with females being larger than males towards the poles, especially in the families Emydidae and Geoemydidae. Estimates of phylogenetic signal for both SSD and habitat type indicate that closely related species occupy similar habitats and exhibit similar direction and magnitude of SSD. These global patterns of SSD may arise from sex-specific reproductive behaviour, fecundity and sex-specific responses to environmental factors that differ among habitats and vary systematically across latitude. Thus, this study adds to our current understanding that while SSD can vary dramatically across and within turtle species under phylogenetic constraints, it may be driven, maintained and exaggerated by habitat type, climate and geographic location.

Journal of Evolutionary Biology↗

USGS1993

Allogenic and autogenic controls on sedimentation in the central Sumatra basin as an analogue for Pennsylvanian coal-bearing strata in the Appalachian basin

Recent sedimentation patterns in the central Sumatra basin, Republic of Indonesia, may help to explain the cyclic stratigraphy of the Pennsylvanian System of the eastern United States. Modern influx of fluvial siliciclastic sediment to the epeiric seas of the Sunda shelf, including the Strait of Malacca, appears to be highly restricted by rain forest cover within the ever-wet climate belt of equatorial Sumatra. As a result, much of the marine and estuarine environments appear to be erosional or nondepositional except for localized deposition of sediment in slack water areas, such as the down-stream end of islands. Contemporaneously, thick (>13 m), laterally extensive (>70,000 km 2 ), peat deposits are forming on poorly drained coastal lowlands. Modern peat formation in this study, therefore, is not coeval with aggrading fluvial siliciclastic systems, a situation that commonly is assumed in many depositional models of coal formation. The stratigraphy of Pleistocene and Holocene sediments on the Sunda shelf, as well as those of the Pennsylvanian System, appears to be better explained by the allocyclic controls of climate and sea-level change on sediment flux rather than by depositional models that are based on autocyclic processes. The objective of this paper is to evaluate allocyclic and autocyclic controls on sedimentation in an epeiric setting in a humid (ever-wet) tropical region. Of particular interest are the factors that control peat formation and siliciclastic sediment flux in rivers, estuaries, and open marine environments.

GSA Special Papers↗

USGS1969

Analysis of a 24-Year photographic record of Nisqually glacier, Mount Rainier National Park, Washington

A systematic coverage of Nisqually Glacier by photographs taken from a network of stations on the ground was begun in 1942 to explore the value and limitations of such photographs as an aid in glacier study. Principles developed may be of value elsewhere, especially for the program 'Measurement of Glacier Variations on a World-Wide Basis' of the International Hydrological Decade. Nisqually Glacier in Mount Rainier National Park, Wash., covers 2.5 square miles (6.5 square kilometers) (1961) and extends from an altitude of about 14,300 feet (4,400 meters) near the top of Mount Rainier down to 4,700 feet (1,400 meters), in a horizontal distance of 4.1 miles (6.6 kilometers). Analyses were made of the annual photographs taken by the writer for 24 years from about 20 stations. A number of pictures taken sporadically from 1884 to 1941 by others were also available for use in the study. Where possible, the results obtained from photographs were compared with those from the available engineering surveys. Such detailed analysis of an extensive photographic coverage of a single glacier may be unique. Photographs illustrating the retreat and advance of the glacier's west ice margin in a reach extending for about a mile (1.6 kilometers) downstream from Wilson Glacier show that, by 1965, most of the ice thickness lost in that area between 1890 and 1944 had been recovered. Withering of the stagnant valley tongue down glacier from the nunatak is portrayed, as is its spectacular reactivation in the 1960's by a vigorous advance of fresh ice. Some of the visible characteristics of advancing and receding termini are noted. Annual values of the glacier's surface slope (5 to 10 degrees) at a cross profile were measured on photographs with respect to a projected vertical line identifiable in each picture. The results were found to average about 2 degrees less than those obtained from the 5-year topographic maps, but they are thought to be a little more accurate owing to lack of a sufficiently small contour interval on the maps for this special purpose. Year-to-year variations in the surface slope and other characteristics from place to place along the glacier are portrayed by pictures to a degree not economically attainable by any other means. Annual changes in the glacier's thickness at two locations were determined from photographs and found to agree well with the results of stadia surveys. A summary of conclusions reached in regard to other data or features of the glacier that were illustrated by annual photographs follows: 1. Toward the end of the ablation season, position of the annual snowline ranged between altitudes of about 5,800 and 7,300 feet (1,750 and 2,250 meters). The altitude limits within which firn was observed on the glacier were about 6,000 and 7,300 feet (1,850 and 2,250 meters). 2. Sources from which debris reaches the glacier are evident. 3. Medial moraines and other persistent patterns sometimes overlooked in the field are more noticeable in photographs. Ice-cored moraines and patterns of multiple lateral moraines are visible. 4. The extent, severity, and nature of crevassing in an area reflect the dynamic condition of the glacier at that location. 5. Erosion has caused certain bedrock areas or features on canyon walls to become unrecognizable within less than 15 years. 6. Effects of the 1932 and 1955 outburst floods on the stream channel and trees for a mile (1.6 kilometers) or so below the glacier are shown in comparison with ordinary, lesser floods. Visible effects include degradation, widening and changes in configuration of the channel, formation of small terraces, removal of vegetation from the flood plain, and the deposition of huge boulders on the stream banks and flood plain. Some photographic procedures recommended for use in a program of this type are described in the section on "Recommended Photographic Procedures."

Washington↗

USGS2013

Developing an outcome-based biodiversity metric in support of the field to market project: Final report

Our objective was to create a metric that would calculate the relative impact of common commercial agricultural practices on terrestrial vertebrate richness. We sought to define impacts in fields (including field borders) of the southeastern region’s commercial production of corn, wheat, soy, and cotton. The metric is intended to serve as an educational tool, allowing producers to see how operational decisions made at the field level impact overall vertebrate species richness and to explore decision impacts to targeted species groups (e.g. game, pest, or beneficial species). Agricultural landscapes are often mistakenly thought to be unsuitable habitat for most species. However, as demonstrated by results reported here, even large-scale, conventional agricultural producers are potentially important partners in biodiversity conservation. Many vertebrate species do inhabit agricultural landscapes, benefitting from the provision of water, food, or shelter within cultivated fields and their immediate borders (e.g., Holland et al. 2012). In the Southeastern US, of the 613 terrestrial vertebrate species modeled by the Southeast Gap Analysis Program (SEGAP) (http://www.basic.ncsu.edu/segap/index.html), 263 utilize row crop and associated agricultural land cover classes as potential habitat (Box 1). While some species may be sensitive to certain operational practices (e.g., tillage, pest management, or field border management practices), others are generally tolerant, and some may benefit either directly or indirectly. For example, field margins and ditches often serve as semi-natural habitats providing foraging resources and shelter for vertebrates and are shown to positively influence species richness and abundance (Billeter et al. 2007; Herzon & Helenius 2008; Marshall & Moonen 2002; Shore et al. 2005; Weibull et al. 2003; Wuczyńskia et al. 2011). Biodiversity responses are, therefore, complex, as an individual species’ responses to agricultural production practices depends on that animal’s resource specialization, mobility, and life history strategies (Jeanneret et al. 2003a, b; Jennings & Pocock 2009). The knowledge necessary to define the biodiversity contribution of agricultural lands is specialized, dispersed, and nuanced, and thus not readily accessible. Given access to clearly defined biodiversity tradeoffs between alternative agricultural practices, landowners, land managers and farm operators could collectively enhance the conservation and economic value of agricultural landscapes. Therefore, Field to Market: The Keystone Alliance for Sustainable Agriculture and The Nature Conservancy jointly funded a pilot project to develop a biodiversity metric to integrate into Field to Market’s existing sustainability calculator, The Fieldprint Calculator (http://www. fieldtomarket.org/). Field to Market: The Keystone Alliance for Sustainable Agriculture is an alliance among producers, agribusinesses, food companies, and conservation organizations seeking to create sustainable outcomes for agriculture. The Fieldprint Calculator supports the Keystone Alliance’s vision to achieve safe, accessible, and nutritious food, fiber and fuel in thriving ecosystems to meet the needs of 9 billion people in 2050. In support of this same vision, our project provides proof-of-concept for an outcome-based biodiversity metric for Field to Market to quantify biodiversity impacts of commercial row crop production on terrestrial vertebrate richness. Little research exists examining the impacts of alternative commercial agricultural practices on overall terrestrial biodiversity (McLaughlin & Mineau 1995). Instead, most studies compare organic versus conventional practices (e.g. Freemark & Kirk 2001; Wickramasinghe et al. 2004), and most studies focus on flora, avian, or invertebrate communities (Jeanneret et al. 2003a; Maes et al. 2008; Pollard & Relton 1970). Therefore, we used an expert-knowledge-based approach to develop a metric that predicts expected impacts to shelter and forage resources, individual species, and overall biodiversity (species richness). This approach is modeled after an ecosystems services concept (WRI 2005), except that we examine services (i.e., resources) provided to vertebrate wildlife rather than service provided to the human population. SEGAP predicts species that are potentially present in an area given landscape-scale habitat availability, configuration, and context (e.g., patch size, proximity to resources, connectivity, potential for disturbance). Based on the prediction of species that may be potentially present, the impacts of management decisions within fields and around their borders can be analyzed based on the impact of those practices to the availability of species’ resources. The final metric provides an index of a producer’s relative impact, but perhaps even more importantly, the underlying database allows producers to explore details such as which species are most impacted or how alternative decisions would impact their score.

Technical Bulletin↗

USGS2006

Thematic mapper-derived mineral distribution maps of Idaho, Nevada, and western Montana

This report provides mineral distribution maps based on TM spectral information of minerals commonly associated with hydrothermal alteration in Nevada, Idaho, and western Montana. The product of the processing is provided as four ESRI GRID files with 30 m resolution by state. UTM Zone 11 projection is used for Nevada (grid clsnv) and western Idaho (grid clsid), UTM Zone 12 is used for eastern Idaho and western Montana (grid clsid_mt). A fourth grid with a special Albers projection is used for the Headwaters project covering Idaho and western Montana (grid crccls_hs). Symbolization for all four grids is stored in the ESRI layer or LYR files and color or CLR files. Objectives of the analyses were to cover a large area very quickly and to provide data that could be used at a scale of 1:100,000 or smaller. Thus, the image processing was standardized for speed while still achieving the desired 1:100,000-scale level of detail. Consequently, some subtle features of mineralogy may be missed. The hydrothermal alteration data were not field checked to separate mineral occurrences due to hydrothermal alteration from those due to other natural occurrences. The data were evaluated by overlaying the results with 1:100,000 scale topographic maps to confirm correlation with known mineralized areas. The data were also tested in the Battle Mountain area of north-central Nevada by a weights-of-evidence correlation analysis with metallic mineral sites from the USGS Mineral Resources Data System and were found to have significant spatial correlation. On the basis of on these analyses, the data are considered useful for regional studies at scales of 1:100,000.

Data Series↗

USGS2001

Droughts, epic droughts and droughty centuries - lessons from a California paleoclimatic record: a PACLIM 2001 meeting report

During the early 1990s (but echoing studies by S.T. Harding at the University of California, from as early as the 1930s), several lines of paleoclimate evidence in and around the Sierra Nevada Range have provided the water community in California with some real horror stories. By studying ancient tree stumps submerged in Lake Tahoe and Tenaya Lake, stumps that were emerging from Mono Lake during its recent decline, and stumps that were exhumed in the Walker River bed during the floods of 1997, paleoclimatologists like Scott Stine of California State University, Hayward, assembled a picture of epic droughts in the central Sierra Nevada during the medieval period. These droughts had to be severe to drop water levels in the lakes and rivers low enough for the trees to grow in the first place, and then had to last for hundreds of years to explain tree-ring counts in these sizeable stumps. Worse yet, the evidence suggested at least two such epic droughts, one ending close to 1100 and the other close to 1350. These epic droughts challenged paleoclimatologists, as well as modern climatologists and hydrologists, to understand and, ultimately, to determine the likelihood that such droughts might recur in the foreseeable future. The first challenge, however, was to verify that such droughts were more than local events and as extreme as suggested. At this year’s Pacific Climate (PACLIM) Workshop, held March 18–21, 2001, at Asilomar (Pacific Grove, Calif.), special sessions brought together scientists to compare paleoclimatic reconstructions of ancient droughts and pluvial (wet) epidodes to try to determine the nature of decadal and centennial climate fluctuations in western North America, with emphasis on California. A companion session brought together modern climatologists to report on the latest explanations (and evidence) for decadal climate variations during the instrumental era of the 20th century.

Interagency Ecological Program Newsletter↗

USGS1997

Parasites of lake herring ( Coregonus artedi ) from Lake Superior, with special reference to use of parasites as markers of stock structure

We examined parasites of 152 lake herring ( Coregonus artedi ) collected from three locations in Wisconsin waters of Lake Superior in 1994, four locations in Wisconsin waters in 1996, and one location in Minnesota waters in 1996 to determine; 1) the species composition and relative abundances of parasites in lake herring, 2) the differences in parasite relative abundances across locations sampled, and 3) the utility of parasite relative abundances as markers of stock structure. Parasites from 19 taxa infected lake herring collected in 1994 and 1996; Henneguya zschokkei , Chloromyxum sp., and Cyatho-cephalus truncatus were reported in fishes from Lake Superior for the first time, and Clinostomum mar-ginatum was reported in lake herring for the first time. Significant differences in abundances of eight parasite taxa were found across locations sampled in 1996, with most of the differences occurring between fish from Minnesota and Wisconsin waters. Nonparametric discriminant function analyses correctly classified 105 of the 108 fish (97%) from Wisconsin waters in 1994 and 1996 and also correctly classified 9 of the 13 fish (69%) from the one location in Minnesota waters. This indicated that little mixing of lake herring from those regions occurred and that the potential exists to use parasite abundances as a marker of lake herring stock structure. This was the first time that multivariate analysis of parasites have been used in the Great Lakes to assess stock structure of fishes. Because the technique was highly successful at classifying locations of our samples, we recommend that parasite abundances in lake herring from all areas of the lake be analyzed as part of a larger study to determine whether lake herring from populations throughout the lake can be as accurately classified as were fish in our study.

Journal of Great Lakes Research↗

USGS2025

Integrating diverse stakeholder knowledge in recreational fisheries decision making

Scientists and policymakers increasingly recognize that recreational fisheries decision making should in some way involve the knowledge of affected stakeholders. There are myriad studies about integrating stakeholder knowledge, but they span broad disciplines and topics. Lacking is (i) simple taxonomies that organize general approaches for integrating knowledge, and (ii) a review and examples of their application to specifically recreational fisheries and specifically diverse stakeholders. This chapter first defines the terms “stakeholders” and “recreational” and recognizes that globally, the decision making for non-commercial fisheries often occurs outside of the North American concept of management agencies and even purely leisure-based fisheries. Most of the chapter reviews common approaches for integrating stakeholder knowledge, from near-complete external governance with minimal input from stakeholders (top-down, command-and-control) to self-governance by stakeholders. Organizationally, we adapt the existing cooperative management continuum to first separate non-participatory from participatory approaches and then separate participatory approaches into those aimed at creating knowledge (to eventually inform future decisions) and those focused on decision making itself. The approaches we consider include observing stakeholders (e.g., via survey), incorporating multiple types of knowing (e.g., local traditional knowledge), collaborative data collection (e.g., citizen science), collaborative modelling (e.g., mental models and quantitative modelling), participatory decision making (co-management proper and the special cases of structured decision making and adaptive management), and finally self-governance (including private management of recreational fisheries). We define each according to a broader literature beyond recreational fisheries, describe the recognized advantages and disadvantages, describe or summarize applications to recreational fisheries, and finally mention relevance for integrating specifically diverse stakeholder knowledge. We then provide advice for how to select different approaches, including situations in which certain approaches are more likely to produce intended consequences. We conclude by describing potential challenges to the more useful integration of diverse stakeholder knowledge and needs in recreational fisheries decision making.

Book chapter↗

USGS1955

Estimates of the abundances of some chemical elements and their reliability

During the past thirty years the development of improved methods of analysis, especially optical spectrography, x-ray spectrography, and colorimetric methods, has resulted in a wealth of new data on the abundances of many elements. Nevertheless, present estimates differ greatly in reliability; some, such as the estimate for bismuth, are based on very few actual determinations, whereas others, such as that for gallium, are based on analyses of many samples. This paper reviews the estimates of abundance for the elements bismuth, germanium, gallium, and yttrium, taken as examples to illustrate the wide variation in reliability. For gallium and yttrium, a study has been made of spectrographic analyses by four laboratories of more than 600 chemically analyzed rocks from many areas of the world. Comparison shows that these furnish valuable data on abundance, although attention must be directed to regional variation. The comparison also shows the need for continued interlaboratory standardization. The estimate for bismuth is based on so few determinations that no appraisal of its accuracy can be made. The estimate for germanium is based on very few determinations but is almost certainly of the right order of magnitude, though perhaps slightly too high. The estimates for gallium and yttrium, based on many determinations, are almost certainly of the right order of magnitude, though that for gallium may be slightly low and that for yttrium may be substantially low.

GSA Special Papers↗

USGS2007

Relatively simple through-going fault planes at large-earthquake depth may be concealed by the surface complexity of strike-slip faults

At the surface, strike-slip fault stepovers, including abrupt fault bends, are typically regions of complex, often disconnected faults. This complexity has traditionally led geologists studying the hazard of active faults to consider such stepovers as important fault segment boundaries, and to give lower weight to earthquake scenarios that involve rupture through the stepover zone. However, recent geological and geophysical studies of several stepover zones along the San Andreas fault system in California have revealed that the complex nature of the fault zone at the surface masks a much simpler and direct connection at depths associated with large earthquakes (greater than 5 km). In turn, the simplicity of the connection suggests that a stepover zone would provide less of an impediment to through-going rupture in a large earthquake, so that the role of stepovers as segment boundaries has probably been overemphasized. However, counter-examples of fault complexity at depth associated with surface stepovers are known, so the role of stepovers in fault rupture behaviour must be carefully established in each case.

California↗

USGS2007

U.S. Geological Survey scientific activities in the exploration of Antarctica: 1946-2006 record of personnel in Antarctica and their postal cachets: U.S. Navy (1946-48, 1954-60), International Geophysical Year (1957-58), and USGS (1960-2006)

Antarctica, a vast region encompassing 13.2 million km2 (5.1 million mi2), is considered to be one of the most important scientific laboratories on Earth. During the past 60 years, the USGS, in collaboration and with logistical support from the National Science Foundation's Office of Polar Programs, has sent 325 USGS scientists to Antarctica to work on a wide range of projects: 169 personnel from the NMD (mostly aerial photography, surveying, and geodesy, primarily used for the modern mapping of Antarctica), 138 personnel from the GD (mostly geophysical and geological studies onshore and offshore), 15 personnel from the WRD (mostly hydrological/glaciological studies in the McMurdo Dry Valleys), 2 personnel from the BRD (microbiological studies in the McMurdo Dry Valleys), and 1 person from the Director's Office (P. Patrick Leahy, Acting Director, 2005–06 austral field season). Three GD scientists and three NMD scientists have carried out field work in Antarctica 9 or more times: John C. Behrendt (15), who started in 1956–57 and published two memoirs (Behrendt, 1998, 2005), Arthur B. Ford (10), who started in 1960–61, and Gary D. Clow (9), who started in 1985–86; Larry D. Hothem (12), who began as a winter-over geodesist at Mawson Station in 1968–69, and Jerry L. Mullins (12), who started in 1982–83 and followed in the legendary footsteps of his NMD predecessor, William R. MacDonald (9), who started in 1960–61 and supervised the acquisition of more than 1,000,000 square miles of aerial photography of Antarctica. This report provides a record as complete as possible, of USGS and non-USGS collaborating personnel in Antarctica from 1946–2006, the geographic locations of their work, and their scientific/engineering disciplines represented. Postal cachets for each year follow the table of personnel and scientific activities in the exploration of Antarctica during those 60 years. To commemorate special events and projects in Antarctica, it became an international practice to create postal cachets. A cachet is defined as a seal, emblem, or commemorative design printed or stamped on an envelope to mark a philatelic or special event. All stamp collectors are familiar with engraved cachets on envelopes of "First-Day-of-Issue" stamps. For Antarctica, a stamped (inked) impression informs the scientist, historian, stamp collector, and general public about the multidisciplinary science projects staffed by USGS scientists and other specialists during a specific austral summer field season. Because philatelic cachets were created by team members for each USGS field season, in most cases depicting the specific areas and scientific objectives, the cachets have become a convenient documentation of the people, projects, and geographic places for that year. Because the cachets are representative of USGS activities, each year's cachet is included in that year's Open-File Report (1960–61 to 2005–06). Starting with the 1983–84 season, however, two USGS cachets were prepared for the next seven years, one for the winter team at Amundsen-Scott South Pole Station, until 1992–93, and the other for all other field sites. Multiple cachets were created by USGS divisional programs during the 1962–63, 1963–64, 1970–71, 1972–73, 1975–76, 1978–79, 1979–80, 1983–84, 1984–85, 1986–87, 1995–96, 2003–04, and the 2005–06 years. This report includes facsimiles of each annual postal cachet (or postal cachets) designed by USGS graphic specialists and provides a record of USGS personnel (and non-USGS collaborating scientists) and their science division affiliation for each austral field season. In addition, cachets used by USGS personnel for U.S. Navy Operation Highjump (1946–47), U.S. Navy Operation Windmill (1947–48), U.S. Navy U.S.S. Atka reconnaissance cruise (1954–55), U.S. Navy Operation Deep Freeze (DF) (I, 1955–56; II, 1956–57; III, 1957–58; IV, 1958–59; and DF 60, 1959–60), and the International Geophysical Year (1957–58) are included, because USGS scientists made use of these cachets when involved in each of the field activities during these austral field seasons.

Open-File Report↗

USGS2002

Sea otter studies in Glacier Bay National Park and Preserve

Following translocations to the outer coast of Southeast Alaska in 1965, sea otters have been expanding their range and increasing in abundance. We began conducting surveys for sea otters in Cross Sound, Icy Strait, and Glacier Bay, Alaska in 1994, following initial reports (in 1993) of their presence in Glacier Bay. Since 1995, the number of sea otters in Glacier Bay proper has increased from around 5 to more than 1500. Between 1993 and 1997 sea otters were apparently only occasional visitors to Glacier Bay, but in 1998 long-term residence was established as indicated by the presence of adult females and their dependent pups. Sea otter distribution is limited to the Lower Bay, south of Sandy Cove, and is not continuous within that area. Concentrations occur in the vicinity of Sita Reef and Boulder Island and between Pt. Carolus and Rush Pt. on the west side of the Bay (Figure 1). We describe the diet of sea otters during 2001 in Glacier Bay based on visual observations of prey during 456 successful forage dives. In Glacier Bay, diet consisted of 62% clam, 15% mussel, 9% crab, 7% unidentified, 4& urchins, and 4% other. Most prey recovered by sea otters are commercially, socially, or ecologically important species. Species of clam include Saxidomus gigantea, Protothaca staminea, and Mya truncata. Urchins are primarily Strongylocentrotus droebachiensis and the mussel is Modiolus modiolus. Crabs include species of three genera: Cancer, Chinoecetes, and Telmessus. Although we characterize diet at broad geographic scales, we found diet to vary between sites separated by as little as several hundred meters. Dietary variation among and within sites can reflect differences in prey availability and individual specialization. We estimated species composition, density, biomass, and sizes of subtidal clams, urchins, and mussels at 9 sites in lower Glacier Bay. All sites were selected based on the presence of abundant clam siphons. Sites were not selected to allow inference to any area larger than the sampling area (approx 400 m^2). Sites were selected to achieve a broad geographic sample of dense subtidal clam beds within Glacier Bay prior to occupation and foraging by sea otters. There was no direct evidence of otter foraging at any of our clam sampling sites. We sampled 11,568 bivalves representing 14 speces of clam and 2 species of mussel. We sampled 4,981 urchins, all Strongylocentrotus droeobachiensis. Only four species of clam (littleneck clams, Protothaca staminea; butter clams, Saxidomus gigantea; soft-shell claims, Mya truncata; and Macoma sp.) accounted for 91.6% of all clams sampled. Mean total clam density (#/0.25 m^2) across the 9 sites was 62.3. Densities (and se ) of P. staminea averaged 22.6 (1.6) and ranged from 0 to 97. Densities of S. gigantea averaged 14.4 (1.0) and ranged from 0 to 63. Densities of Macoma sp. averaged 14.5 (1.2) and ranged from 0 to 78. Densities of S. droebachiensis averaged 27.3 (1.7) and ranged from 0 to 109. Mean S. droebachiensis sizes ranged from 16 to 30 mm by site. Mean P. staminea sizes ranged from 30 to 53 mm, mean S. gigantea sizes ranged from 51 to 85 mm, and mean Macoma sp. sizes ranged from 14 to 19 mm. Although not the most abundant clam, S. gigantea contributed the greatest proportion to total clam biomass (63%), followed by P. staminea (24%). Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters presently. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but will also trigger ecosystem level changes, as prey for other predators, such as octopus, sea stars, fishes, birds and mammals are modified. Sea ott

Annual Report↗

USGS2009

Using stable isotopes to investigate individual diet specialization in California sea otters (Enhydra lutris nereis)

Differences in diet composition among conspecifics (dietary specialization) have been documented across a broad range of taxonomic groups and habitats, and such variation at the individual level is increasingly recognized as an important component of diversity in trophic interactions. Accurate identification of individual dietary specialization, however, requires longitudinal dietary records that are labor-intensive and cost-prohibitive to obtain for many species. Here we explore the use of stable isotopes (δ 13 C and δ 15 N) as a promising technique for detecting and quantifying patterns of individual dietary specialization. Southern sea otters ( Enhydra lutris nereis ) offer a unique opportunity for testing this approach because (1) they consume a wide variety of prey that span multiple trophic levels, habitats, and ecologically defined functional groups; and (2) individual diet specialization can be validated with existing observational data. We analyzed the isotopic composition of sea otter vibrissae ( n = 31) in order to characterize inter- and intra-individual variation in sea otter diets at Monterey Bay, California, USA. At the population level, sea otters showed substantial variation in both δ 13 C and δ 15 N values, occupying nearly all of the “isotopic space” created by the diversity of isotopic signatures of potential prey taxa. Most of the variation in sea otter vibrissae was accounted for by differences between individuals, with much less contributed by within-individual variation. A majority of sea otters (∼80%) showed relatively little temporal variability in isotopic composition, suggesting that the proportional composition of most individuals' diets is relatively constant over time; a few individuals (∼20%) exhibited a high degree of intra-vibrissa isotopic variability, suggesting seasonal shifts in diet composition. These results and our interpretation of them were supported by long-term observational data on the diets of radio-tagged sea otters from the same population ( n = 23). Our results demonstrate that stable isotopes can provide an efficient tool for measuring individual- and population-level dietary breadth and may be useful for studying populations where longitudinal data on individuals would otherwise be impossible to acquire. This will be critical for examining the causes and consequences of dietary variation within and among consumer populations, thereby improving our understanding of these important ecological and evolutionary processes at the community level.

Ecology↗